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Conserved domains on  [gi|145350738|ref|XP_001419756|]
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predicted protein [Ostreococcus lucimarinus CCE9901]

Protein Classification

folylpolyglutamate synthase( domain architecture ID 11477238)

folylpolyglutamate synthase (FPGS) catalyzes the addition of glutamate residues to folates, forming polyglutamate derivatives which is essential for the metabolism of folate

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PLN02881 PLN02881
tetrahydrofolylpolyglutamate synthase
1-483 0e+00

tetrahydrofolylpolyglutamate synthase


:

Pssm-ID: 215476  Cd Length: 530  Bit Score: 748.80  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738   1 MRDDDRTYDAAVRELAKTITGKKRADPGAVTweAQFAQLETYVSRLDLRGRVDALDVVHVAGTKGKGSTCAMVEGMLRAS 80
Cdd:PLN02881   9 DAPTSDSYEEALDALSSLITKKSRADPSNPG--DQFDLLFDYLKILELEEAISRLKVIHVAGTKGKGSTCTFTESILRNC 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738  81 GTRVGTFTSPHLMDVRERFRIDGAMVDEETFAREFWWTRDAIAARC-GDLGMPAYFRFLTLLGLRIFSSAGVEACVLEVG 159
Cdd:PLN02881  87 GFRTGLFTSPHLIDVRERFRLDGVDISEEKFLRYFWWCWDRLKEKTtEDLPMPAYFRFLTLLAFKIFSAEQVDVAILEVG 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 160 LGGRLDATNVVRAPAACGITSLGMDHVDILGDTLGKIATEKAGIMKPGVRTFTAPQKPEAMVALERRAAEVGSPLVVARD 239
Cdd:PLN02881 167 LGGRLDATNVVQKPVVCGITSLGYDHMEILGDTLGKIAGEKAGIFKPGVPAFTVPQPDEAMRVLEERASELGVPLQVVEP 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 240 LDSYeGGSEIEVGLAGPHQRVNAAVAVELVREWANATNqpwAEEMEASFARNELPESFRVGLEKTTWPGRSQVMHD---- 315
Cdd:PLN02881 247 LDSY-GLSGLKLGLAGEHQYLNAGLAVALCSTWLQRTG---HEEFEALLQAGTLPEQFIKGLSTASLQGRAQVVPDsyin 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 316 -PDVMNLTFYLDGAHTIESMRHSAEWFTSTAR-----------------------AVTAEHNIMLFNCMDDRKPEDLLEP 371
Cdd:PLN02881 323 sEDSGDLVFYLDGAHSPESMEACARWFSSAIKgdeqspgsgygphggggksedteSNKISEQILLFNCMSVRDPQLLLPP 402
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 372 VADVFHTTSnVQLERAIFSPPDST----TSGLDKCGDAKATSWQDRCARTWDDIIVKRA-------------NVLAEKAQ 434
Cdd:PLN02881 403 LANTCASNG-VPFKKALFVPNISVynkvGSGLPVDDPQVDLSWQFTLQRVWESLIRGKAgapadavceesasSGLNDGKS 481
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*....
gi 145350738 435 DTRGVVVSSIHQALSLIRHRAREVAPARVNVLVTGSLYLVGDVLRHLKK 483
Cdd:PLN02881 482 DENSAVFPSLPLAIKWLRDCARENPSLRFQVLVTGSLHLVGDVLRLLKK 530
 
Name Accession Description Interval E-value
PLN02881 PLN02881
tetrahydrofolylpolyglutamate synthase
1-483 0e+00

tetrahydrofolylpolyglutamate synthase


Pssm-ID: 215476  Cd Length: 530  Bit Score: 748.80  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738   1 MRDDDRTYDAAVRELAKTITGKKRADPGAVTweAQFAQLETYVSRLDLRGRVDALDVVHVAGTKGKGSTCAMVEGMLRAS 80
Cdd:PLN02881   9 DAPTSDSYEEALDALSSLITKKSRADPSNPG--DQFDLLFDYLKILELEEAISRLKVIHVAGTKGKGSTCTFTESILRNC 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738  81 GTRVGTFTSPHLMDVRERFRIDGAMVDEETFAREFWWTRDAIAARC-GDLGMPAYFRFLTLLGLRIFSSAGVEACVLEVG 159
Cdd:PLN02881  87 GFRTGLFTSPHLIDVRERFRLDGVDISEEKFLRYFWWCWDRLKEKTtEDLPMPAYFRFLTLLAFKIFSAEQVDVAILEVG 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 160 LGGRLDATNVVRAPAACGITSLGMDHVDILGDTLGKIATEKAGIMKPGVRTFTAPQKPEAMVALERRAAEVGSPLVVARD 239
Cdd:PLN02881 167 LGGRLDATNVVQKPVVCGITSLGYDHMEILGDTLGKIAGEKAGIFKPGVPAFTVPQPDEAMRVLEERASELGVPLQVVEP 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 240 LDSYeGGSEIEVGLAGPHQRVNAAVAVELVREWANATNqpwAEEMEASFARNELPESFRVGLEKTTWPGRSQVMHD---- 315
Cdd:PLN02881 247 LDSY-GLSGLKLGLAGEHQYLNAGLAVALCSTWLQRTG---HEEFEALLQAGTLPEQFIKGLSTASLQGRAQVVPDsyin 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 316 -PDVMNLTFYLDGAHTIESMRHSAEWFTSTAR-----------------------AVTAEHNIMLFNCMDDRKPEDLLEP 371
Cdd:PLN02881 323 sEDSGDLVFYLDGAHSPESMEACARWFSSAIKgdeqspgsgygphggggksedteSNKISEQILLFNCMSVRDPQLLLPP 402
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 372 VADVFHTTSnVQLERAIFSPPDST----TSGLDKCGDAKATSWQDRCARTWDDIIVKRA-------------NVLAEKAQ 434
Cdd:PLN02881 403 LANTCASNG-VPFKKALFVPNISVynkvGSGLPVDDPQVDLSWQFTLQRVWESLIRGKAgapadavceesasSGLNDGKS 481
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*....
gi 145350738 435 DTRGVVVSSIHQALSLIRHRAREVAPARVNVLVTGSLYLVGDVLRHLKK 483
Cdd:PLN02881 482 DENSAVFPSLPLAIKWLRDCARENPSLRFQVLVTGSLHLVGDVLRLLKK 530
FolC COG0285
Folylpolyglutamate synthase/Dihydropteroate synthase [Coenzyme transport and metabolism]; ...
53-483 2.86e-120

Folylpolyglutamate synthase/Dihydropteroate synthase [Coenzyme transport and metabolism]; Folylpolyglutamate synthase/Dihydropteroate synthase is part of the Pathway/BioSystem: Folate biosynthesis


Pssm-ID: 440054 [Multi-domain]  Cd Length: 423  Bit Score: 358.65  E-value: 2.86e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738  53 DALDVVHVAGTKGKGSTCAMVEGMLRASGTRVGTFTSPHLMDVRERFRIDGAMVDEETFAREFWWTRDAIAARcgDLGMP 132
Cdd:COG0285   38 RKLPVIHVAGTNGKGSTAAMLESILRAAGYRVGLYTSPHLVRFNERIRINGEPISDEELVEALEEVEPAVEEV--DAGPP 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 133 AYFRFLTLLGLRIFSSAGVEACVLEVGLGGRLDATNVVRaPAACGITSLGMDHVDILGDTLGKIATEKAGIMKPGVRTFT 212
Cdd:COG0285  116 TFFEVTTAAAFLYFAEAPVDVAVLEVGLGGRLDATNVID-PLVSVITSIGLDHTDFLGDTLEEIAREKAGIIKPGVPVVT 194
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 213 APQKPEAMVALERRAAEVGSPLVVA-RDLD---------SYEGGS----EIEVGLAGPHQRVNAAVAVELVREwanatnq 278
Cdd:COG0285  195 GDQQPEALEVIEERAAELGAPLYRAgRDFSveeregavfSYQGPGgeyeDLPLPLLGAHQAENAALALAALEA------- 267
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 279 pwaeEMEASFARNElpESFRVGLEKTTWPGRSQVMH-DPDVmnltfYLDGAHTIESMRHSAEWFtstARAVTAEHNIMLF 357
Cdd:COG0285  268 ----LRELGLPISE--EAIREGLANARWPGRLEVLSrGPLV-----ILDGAHNPAGARALAETL---KELFPFRKLHLVF 333
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 358 NCMDDRKPEDLLEPVADVFHttsnvqleRAIFSPPDSttsgldkcgdakatswqdrcARTWDdiivkrANVLAEKAQDT- 436
Cdd:COG0285  334 GMLADKDIEGMLAALAPLAD--------EVIVTTPPS--------------------PRALD------AEELAEAARELg 379
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*...
gi 145350738 437 -RGVVVSSIHQALSLIRHRAREVAParvnVLVTGSLYLVGDVLRHLKK 483
Cdd:COG0285  380 lRVEVAPDVEEALEAALELADPDDL----ILVTGSLYLVGEVRALLGR 423
folC TIGR01499
folylpolyglutamate synthase/dihydrofolate synthase; This model represents the FolC family of ...
53-479 3.65e-112

folylpolyglutamate synthase/dihydrofolate synthase; This model represents the FolC family of folate pathway proteins. Most examples are bifunctional, active as both folylpolyglutamate synthetase (EC 6.3.2.17) and dihydrofolate synthetase (EC 6.3.2.12). The two activities are similar - ATP + glutamate + dihydropteroate or tetrahydrofolyl-[Glu](n) = ADP + orthophosphate + dihydrofolate or tetrahydrofolyl-[Glu](n+1). A mutation study of the FolC gene of E. coli suggests that both activities belong to the same active site. Because some examples are monofunctional (and these cannot be separated phylogenetically), the model is treated as subfamily, not equivalog. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid]


Pssm-ID: 273659 [Multi-domain]  Cd Length: 397  Bit Score: 336.95  E-value: 3.65e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738   53 DALDVVHVAGTKGKGSTCAMVEGMLRASGTRVGTFTSPHLMDVRERFRIDGAMVDEETFAREFWWTRDAIAarcGDLGMP 132
Cdd:TIGR01499  16 DLYPVIHVAGTNGKGSTCAFLESILRAAGYKVGLFTSPHLVSFNERIRINGEPISDEELAQAFEQVRPILE---SLSQQP 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738  133 AYFRFLTLLGLRIFSSAGVEACVLEVGLGGRLDATNVVRaPAACGITSLGMDHVDILGDTLGKIATEKAGIMKPGVRTFT 212
Cdd:TIGR01499  93 TYFELLTLLAFLYFAQAQVDVAVLEVGLGGRLDATNVIE-PLVSVITSIGLDHTEILGDTLEEIAWEKAGIIKEGVPIVT 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738  213 APQKPEAMVALERRAAEVGSPLVVARDLDSYEGGSE--------------IEVGLAGPHQRVNAAVAVELVREWANATNQ 278
Cdd:TIGR01499 172 GEQEPEALNVLKKKAQEKGAPLFVVGRDFNYSETDEnylsfsganlflepLALSLLGDHQQENAALALAALEVLGKQNPK 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738  279 PwaeemeasfarneLPESFRVGLEKTTWPGRSQVMhdpDVMNLTFYLDGAHTIESMRHSAEWFTSTAravTAEHNIMLFN 358
Cdd:TIGR01499 252 L-------------SEEAIRQGLANTIWPGRLEIL---SEDNPNILLDGAHNPHSAEALAEWFKKRF---NGRPITLLFG 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738  359 CMDDRKPEDLLEPVADVfhttsnvqLERAIFSPPDSTTSGLDkcgdakatswqdrcartwddiivkrANVLAEKAQDTRG 438
Cdd:TIGR01499 313 ALADKDAAAMLAPLKPV--------VDKEVFVTPFDYPRADD-------------------------AADLAAFAEETGK 359
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|.
gi 145350738  439 VVVSSIHQALSLIRHrarevAPARVNVLVTGSLYLVGDVLR 479
Cdd:TIGR01499 360 STVEDWREALEEALN-----ASAEDDILVTGSLYLVGEVRK 395
Mur_ligase_C pfam02875
Mur ligase family, glutamate ligase domain; This family contains a number of related ligase ...
306-368 1.48e-04

Mur ligase family, glutamate ligase domain; This family contains a number of related ligase enzymes which have EC numbers 6.3.2.*. This family includes: MurC, MurD, MurE, MurF, Mpl and FolC. MurC, MurD, Mure and MurF catalyze consecutive steps in the synthesis of peptidoglycan. Peptidoglycan consists of a sheet of two sugar derivatives, with one of these N-acetylmuramic acid attaching to a small pentapeptide. The pentapeptide is is made of L-alanine, D-glutamic acid, Meso-diaminopimelic acid and D-alanyl alanine. The peptide moiety is synthesized by successively adding these amino acids to UDP-N-acetylmuramic acid. MurC transfers the L-alanine, MurD transfers the D-glutamate, MurE transfers the diaminopimelic acid, and MurF transfers the D-alanyl alanine. This family also includes Folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate.


Pssm-ID: 460731 [Multi-domain]  Cd Length: 87  Bit Score: 40.41  E-value: 1.48e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 145350738  306 WPGRSQVMHDPDvmNLTFYLDGAHTIESMRHSAEwftsTARAVTAEHNIMLFNCMDDRKPEDL 368
Cdd:pfam02875   1 VPGRLEVVGENN--GVLVIDDYAHNPDAMEAALR----ALRNLFPGRLILVFGGMGDRDAEFH 57
 
Name Accession Description Interval E-value
PLN02881 PLN02881
tetrahydrofolylpolyglutamate synthase
1-483 0e+00

tetrahydrofolylpolyglutamate synthase


Pssm-ID: 215476  Cd Length: 530  Bit Score: 748.80  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738   1 MRDDDRTYDAAVRELAKTITGKKRADPGAVTweAQFAQLETYVSRLDLRGRVDALDVVHVAGTKGKGSTCAMVEGMLRAS 80
Cdd:PLN02881   9 DAPTSDSYEEALDALSSLITKKSRADPSNPG--DQFDLLFDYLKILELEEAISRLKVIHVAGTKGKGSTCTFTESILRNC 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738  81 GTRVGTFTSPHLMDVRERFRIDGAMVDEETFAREFWWTRDAIAARC-GDLGMPAYFRFLTLLGLRIFSSAGVEACVLEVG 159
Cdd:PLN02881  87 GFRTGLFTSPHLIDVRERFRLDGVDISEEKFLRYFWWCWDRLKEKTtEDLPMPAYFRFLTLLAFKIFSAEQVDVAILEVG 166
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 160 LGGRLDATNVVRAPAACGITSLGMDHVDILGDTLGKIATEKAGIMKPGVRTFTAPQKPEAMVALERRAAEVGSPLVVARD 239
Cdd:PLN02881 167 LGGRLDATNVVQKPVVCGITSLGYDHMEILGDTLGKIAGEKAGIFKPGVPAFTVPQPDEAMRVLEERASELGVPLQVVEP 246
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 240 LDSYeGGSEIEVGLAGPHQRVNAAVAVELVREWANATNqpwAEEMEASFARNELPESFRVGLEKTTWPGRSQVMHD---- 315
Cdd:PLN02881 247 LDSY-GLSGLKLGLAGEHQYLNAGLAVALCSTWLQRTG---HEEFEALLQAGTLPEQFIKGLSTASLQGRAQVVPDsyin 322
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 316 -PDVMNLTFYLDGAHTIESMRHSAEWFTSTAR-----------------------AVTAEHNIMLFNCMDDRKPEDLLEP 371
Cdd:PLN02881 323 sEDSGDLVFYLDGAHSPESMEACARWFSSAIKgdeqspgsgygphggggksedteSNKISEQILLFNCMSVRDPQLLLPP 402
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 372 VADVFHTTSnVQLERAIFSPPDST----TSGLDKCGDAKATSWQDRCARTWDDIIVKRA-------------NVLAEKAQ 434
Cdd:PLN02881 403 LANTCASNG-VPFKKALFVPNISVynkvGSGLPVDDPQVDLSWQFTLQRVWESLIRGKAgapadavceesasSGLNDGKS 481
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|....*....
gi 145350738 435 DTRGVVVSSIHQALSLIRHRAREVAPARVNVLVTGSLYLVGDVLRHLKK 483
Cdd:PLN02881 482 DENSAVFPSLPLAIKWLRDCARENPSLRFQVLVTGSLHLVGDVLRLLKK 530
FolC COG0285
Folylpolyglutamate synthase/Dihydropteroate synthase [Coenzyme transport and metabolism]; ...
53-483 2.86e-120

Folylpolyglutamate synthase/Dihydropteroate synthase [Coenzyme transport and metabolism]; Folylpolyglutamate synthase/Dihydropteroate synthase is part of the Pathway/BioSystem: Folate biosynthesis


Pssm-ID: 440054 [Multi-domain]  Cd Length: 423  Bit Score: 358.65  E-value: 2.86e-120
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738  53 DALDVVHVAGTKGKGSTCAMVEGMLRASGTRVGTFTSPHLMDVRERFRIDGAMVDEETFAREFWWTRDAIAARcgDLGMP 132
Cdd:COG0285   38 RKLPVIHVAGTNGKGSTAAMLESILRAAGYRVGLYTSPHLVRFNERIRINGEPISDEELVEALEEVEPAVEEV--DAGPP 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 133 AYFRFLTLLGLRIFSSAGVEACVLEVGLGGRLDATNVVRaPAACGITSLGMDHVDILGDTLGKIATEKAGIMKPGVRTFT 212
Cdd:COG0285  116 TFFEVTTAAAFLYFAEAPVDVAVLEVGLGGRLDATNVID-PLVSVITSIGLDHTDFLGDTLEEIAREKAGIIKPGVPVVT 194
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 213 APQKPEAMVALERRAAEVGSPLVVA-RDLD---------SYEGGS----EIEVGLAGPHQRVNAAVAVELVREwanatnq 278
Cdd:COG0285  195 GDQQPEALEVIEERAAELGAPLYRAgRDFSveeregavfSYQGPGgeyeDLPLPLLGAHQAENAALALAALEA------- 267
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 279 pwaeEMEASFARNElpESFRVGLEKTTWPGRSQVMH-DPDVmnltfYLDGAHTIESMRHSAEWFtstARAVTAEHNIMLF 357
Cdd:COG0285  268 ----LRELGLPISE--EAIREGLANARWPGRLEVLSrGPLV-----ILDGAHNPAGARALAETL---KELFPFRKLHLVF 333
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 358 NCMDDRKPEDLLEPVADVFHttsnvqleRAIFSPPDSttsgldkcgdakatswqdrcARTWDdiivkrANVLAEKAQDT- 436
Cdd:COG0285  334 GMLADKDIEGMLAALAPLAD--------EVIVTTPPS--------------------PRALD------AEELAEAARELg 379
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|....*...
gi 145350738 437 -RGVVVSSIHQALSLIRHRAREVAParvnVLVTGSLYLVGDVLRHLKK 483
Cdd:COG0285  380 lRVEVAPDVEEALEAALELADPDDL----ILVTGSLYLVGEVRALLGR 423
folC TIGR01499
folylpolyglutamate synthase/dihydrofolate synthase; This model represents the FolC family of ...
53-479 3.65e-112

folylpolyglutamate synthase/dihydrofolate synthase; This model represents the FolC family of folate pathway proteins. Most examples are bifunctional, active as both folylpolyglutamate synthetase (EC 6.3.2.17) and dihydrofolate synthetase (EC 6.3.2.12). The two activities are similar - ATP + glutamate + dihydropteroate or tetrahydrofolyl-[Glu](n) = ADP + orthophosphate + dihydrofolate or tetrahydrofolyl-[Glu](n+1). A mutation study of the FolC gene of E. coli suggests that both activities belong to the same active site. Because some examples are monofunctional (and these cannot be separated phylogenetically), the model is treated as subfamily, not equivalog. [Biosynthesis of cofactors, prosthetic groups, and carriers, Folic acid]


Pssm-ID: 273659 [Multi-domain]  Cd Length: 397  Bit Score: 336.95  E-value: 3.65e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738   53 DALDVVHVAGTKGKGSTCAMVEGMLRASGTRVGTFTSPHLMDVRERFRIDGAMVDEETFAREFWWTRDAIAarcGDLGMP 132
Cdd:TIGR01499  16 DLYPVIHVAGTNGKGSTCAFLESILRAAGYKVGLFTSPHLVSFNERIRINGEPISDEELAQAFEQVRPILE---SLSQQP 92
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738  133 AYFRFLTLLGLRIFSSAGVEACVLEVGLGGRLDATNVVRaPAACGITSLGMDHVDILGDTLGKIATEKAGIMKPGVRTFT 212
Cdd:TIGR01499  93 TYFELLTLLAFLYFAQAQVDVAVLEVGLGGRLDATNVIE-PLVSVITSIGLDHTEILGDTLEEIAWEKAGIIKEGVPIVT 171
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738  213 APQKPEAMVALERRAAEVGSPLVVARDLDSYEGGSE--------------IEVGLAGPHQRVNAAVAVELVREWANATNQ 278
Cdd:TIGR01499 172 GEQEPEALNVLKKKAQEKGAPLFVVGRDFNYSETDEnylsfsganlflepLALSLLGDHQQENAALALAALEVLGKQNPK 251
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738  279 PwaeemeasfarneLPESFRVGLEKTTWPGRSQVMhdpDVMNLTFYLDGAHTIESMRHSAEWFTSTAravTAEHNIMLFN 358
Cdd:TIGR01499 252 L-------------SEEAIRQGLANTIWPGRLEIL---SEDNPNILLDGAHNPHSAEALAEWFKKRF---NGRPITLLFG 312
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738  359 CMDDRKPEDLLEPVADVfhttsnvqLERAIFSPPDSTTSGLDkcgdakatswqdrcartwddiivkrANVLAEKAQDTRG 438
Cdd:TIGR01499 313 ALADKDAAAMLAPLKPV--------VDKEVFVTPFDYPRADD-------------------------AADLAAFAEETGK 359
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|.
gi 145350738  439 VVVSSIHQALSLIRHrarevAPARVNVLVTGSLYLVGDVLR 479
Cdd:TIGR01499 360 STVEDWREALEEALN-----ASAEDDILVTGSLYLVGEVRK 395
PLN02913 PLN02913
dihydrofolate synthetase
57-481 1.93e-44

dihydrofolate synthetase


Pssm-ID: 178501 [Multi-domain]  Cd Length: 510  Bit Score: 163.07  E-value: 1.93e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738  57 VVHVAGTKGKGSTCAMVEGMLRASGTRVGTFTSPHLMDVRERFRI--DGAMVDEETFAREFWWTR----DAIAARCGDLg 130
Cdd:PLN02913  77 AVHVAGTKGKGSTAAFLSNILRAQGYSVGCYTSPHLRSIRERISVgkLGKPVSTNTLNDLFHGIKpildEAIQLENGSL- 155
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 131 mpAYFRFLTLLGLRIFSSAGVEACVLEVGLGGRLDATNVVRAP--AACGITSLGMDHVDILGDTLGKIATEKAGIMKPGV 208
Cdd:PLN02913 156 --THFEVLTALAFKLFAQENVDIAVIEAGLGGARDATNVIDSSglAASVITTIGEEHLAALGGSLESIALAKSGIIKQGR 233
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 209 R-TFTAPQKPEAMVALERRAAEVGSPLVVARD---------LDSYEGG---------------------SEIEVGLAGPH 257
Cdd:PLN02913 234 PvVLGGPFLPHIESILRDKASSMNSPVVSASDpgvrssikgIITDNGKpcqscdivirvekddplfielSDVNLRMLGSH 313
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 258 QRVNAA----VAVELVREWANATNqpwaeemeasfarnelpESFRVGLEKTTWPGRSQVMHDPDVMNL-----TFYLDGA 328
Cdd:PLN02913 314 QLQNAVtaacAALCLRDQGWRISD-----------------ASIRAGLENTNLLGRSQFLTSKEAEVLglpgaTVLLDGA 376
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 329 HTIEsmrhSAEWFTSTARAVTAEHNIMLFNCMDDRKpedllEPVADVFHTTSNVQLERAIFSPPDstTSGldkcGDAKAT 408
Cdd:PLN02913 377 HTKE----SAKALVDTIKTAFPEARLALVVAMASDK-----DHLAFASEFLSGLKPEAVFLTEAD--IAG----GKSRST 441
                        410       420       430       440       450       460       470
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 145350738 409 SwqdrcARTWDDIIVKRANVLA-EKAQDTRGVVVSSIHQALSLIRhRAREVAPARVnVLVTGSLYLVGDVLRHL 481
Cdd:PLN02913 442 S-----ASALKEAWIKAAPELGiETLLAENNSLLKSLVDASAILR-KARTLDPSSV-VCVTGSLHIVSAVLASL 508
PRK10846 PRK10846
bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional
54-343 3.17e-39

bifunctional folylpolyglutamate synthase/ dihydrofolate synthase; Provisional


Pssm-ID: 182774 [Multi-domain]  Cd Length: 416  Bit Score: 146.76  E-value: 3.17e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738  54 ALDVVHVAGTKGKGSTCAMVEGMLRASGTRVGTFTSPHLMDVRERFRIDGAMVDEETFAREFwwtrDAIAARCGDLGMpA 133
Cdd:PRK10846  48 APFVFTVAGTNGKGTTCRTLESILMAAGYRVGVYSSPHLVRYTERVRIQGQELPESAHTASF----AEIEAARGDISL-T 122
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 134 YFRFLTLLGLRIFSSAGVEACVLEVGLGGRLDATNVVRAPAACgITSLGMDHVDILGDTLGKIATEKAGIMKPGvrTFTA 213
Cdd:PRK10846 123 YFEYGTLSALWLFKQAQLDVVILEVGLGGRLDATNIVDADVAV-VTSIALDHTDWLGPDRESIGREKAGIFRAE--KPAV 199
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 145350738 214 PQKPEAMVALERRAAEVGSPLvVARDLD----------SYEGGSEIEVGLAGPH-QRVNAAVAVELVRewanatnqpwae 282
Cdd:PRK10846 200 VGEPDMPSTIADVAQEKGALL-QRRGVDwnysvtdhdwAFSDGDGTLENLPLPNvPLPNAATALAALR------------ 266
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 145350738 283 emEASFARNElpESFRVGLEKTTWPGRSQ-VMHDPDVMnltfyLDGAHTiesmRHSAEWFTS 343
Cdd:PRK10846 267 --ASGLEVSE--QAIRDGIASAILPGRFQiVSESPRVI-----LDVAHN----PHAAEYLTG 315
Mur_ligase_C pfam02875
Mur ligase family, glutamate ligase domain; This family contains a number of related ligase ...
306-368 1.48e-04

Mur ligase family, glutamate ligase domain; This family contains a number of related ligase enzymes which have EC numbers 6.3.2.*. This family includes: MurC, MurD, MurE, MurF, Mpl and FolC. MurC, MurD, Mure and MurF catalyze consecutive steps in the synthesis of peptidoglycan. Peptidoglycan consists of a sheet of two sugar derivatives, with one of these N-acetylmuramic acid attaching to a small pentapeptide. The pentapeptide is is made of L-alanine, D-glutamic acid, Meso-diaminopimelic acid and D-alanyl alanine. The peptide moiety is synthesized by successively adding these amino acids to UDP-N-acetylmuramic acid. MurC transfers the L-alanine, MurD transfers the D-glutamate, MurE transfers the diaminopimelic acid, and MurF transfers the D-alanyl alanine. This family also includes Folylpolyglutamate synthase that transfers glutamate to folylpolyglutamate.


Pssm-ID: 460731 [Multi-domain]  Cd Length: 87  Bit Score: 40.41  E-value: 1.48e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 145350738  306 WPGRSQVMHDPDvmNLTFYLDGAHTIESMRHSAEwftsTARAVTAEHNIMLFNCMDDRKPEDL 368
Cdd:pfam02875   1 VPGRLEVVGENN--GVLVIDDYAHNPDAMEAALR----ALRNLFPGRLILVFGGMGDRDAEFH 57
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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