|
Name |
Accession |
Description |
Interval |
E-value |
| Ish1 |
pfam10281 |
Putative nuclear envelope organization protein; This entry represents a repeat found in the ... |
148-184 |
8.68e-07 |
|
Putative nuclear envelope organization protein; This entry represents a repeat found in the fungal protein Ish1, a protein which has a role in nuclear membrane organization.
:
Pssm-ID: 431195 Cd Length: 37 Bit Score: 45.89 E-value: 8.68e-07
10 20 30
....*....|....*....|....*....|....*..
gi 255715811 148 FQNWDEYDLTSWLDEYKVPYDKAHAKKDELLSKVREN 184
Cdd:pfam10281 1 FDTWSDSDLKAWLDSHGIPVSPQGSTRDELLKLARKN 37
|
|
| PRK05035 super family |
cl47132 |
electron transport complex protein RnfC; Provisional |
432-609 |
2.46e-06 |
|
electron transport complex protein RnfC; Provisional
The actual alignment was detected with superfamily member PRK05035:
Pssm-ID: 481472 [Multi-domain] Cd Length: 695 Bit Score: 50.72 E-value: 2.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 432 AAEHASKVAKEKGSDALEYAKDKGSDAADYAKVKGS---DAAEYAKDRGSSAAEYVQEKGSEAATQASKVAKKKGAEASK 508
Cdd:PRK05035 476 AAEARAAKDKDAVAAALARVKAKKAAATQPIVIKAGarpDNSAVIAAREARKAQARARQAEKQAAAAADPKKAAVAAAIA 555
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 509 LAKEKgKDAKEYAMEKGSDATDYAKSKGSDAAEYAKEKGADAAEYAKEKGADAAEYAKEKGADTAEYAKEKGADAADYAK 588
Cdd:PRK05035 556 RAKAK-KAAQQAANAEAEEEVDPKKAAVAAAIARAKAKKAAQQAASAEPEEQVAEVDPKKAAVAAAIARAKAKKAEQQAN 634
|
170 180
....*....|....*....|.
gi 255715811 589 DKSYSAAGYAKEKTSDAAAYA 609
Cdd:PRK05035 635 AEPEEPVDPRKAAVAAAIARA 655
|
|
| Ish1 |
pfam10281 |
Putative nuclear envelope organization protein; This entry represents a repeat found in the ... |
642-677 |
3.03e-05 |
|
Putative nuclear envelope organization protein; This entry represents a repeat found in the fungal protein Ish1, a protein which has a role in nuclear membrane organization.
:
Pssm-ID: 431195 Cd Length: 37 Bit Score: 41.26 E-value: 3.03e-05
10 20 30
....*....|....*....|....*....|....*..
gi 255715811 642 FSSWSMDDLKGYAKSFGIRTGP-TTTREKLVHQVKEN 677
Cdd:pfam10281 1 FDTWSDSDLKAWLDSHGIPVSPqGSTRDELLKLARKN 37
|
|
| Ish1 |
pfam10281 |
Putative nuclear envelope organization protein; This entry represents a repeat found in the ... |
222-259 |
4.95e-05 |
|
Putative nuclear envelope organization protein; This entry represents a repeat found in the fungal protein Ish1, a protein which has a role in nuclear membrane organization.
:
Pssm-ID: 431195 Cd Length: 37 Bit Score: 40.88 E-value: 4.95e-05
10 20 30
....*....|....*....|....*....|....*...
gi 255715811 222 FNSWSTKELGEWLRSHKVKLEDKAShDRKYLLNVAQKN 259
Cdd:pfam10281 1 FDTWSDSDLKAWLDSHGIPVSPQGS-TRDELLKLARKN 37
|
|
| Ish1 |
pfam10281 |
Putative nuclear envelope organization protein; This entry represents a repeat found in the ... |
93-128 |
7.39e-04 |
|
Putative nuclear envelope organization protein; This entry represents a repeat found in the fungal protein Ish1, a protein which has a role in nuclear membrane organization.
:
Pssm-ID: 431195 Cd Length: 37 Bit Score: 37.41 E-value: 7.39e-04
10 20 30
....*....|....*....|....*....|....*..
gi 255715811 93 FDSWSAKDLRKLLSKNKVK-FDVEASRDELAQAAKKN 128
Cdd:pfam10281 1 FDTWSDSDLKAWLDSHGIPvSPQGSTRDELLKLARKN 37
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ish1 |
pfam10281 |
Putative nuclear envelope organization protein; This entry represents a repeat found in the ... |
148-184 |
8.68e-07 |
|
Putative nuclear envelope organization protein; This entry represents a repeat found in the fungal protein Ish1, a protein which has a role in nuclear membrane organization.
Pssm-ID: 431195 Cd Length: 37 Bit Score: 45.89 E-value: 8.68e-07
10 20 30
....*....|....*....|....*....|....*..
gi 255715811 148 FQNWDEYDLTSWLDEYKVPYDKAHAKKDELLSKVREN 184
Cdd:pfam10281 1 FDTWSDSDLKAWLDSHGIPVSPQGSTRDELLKLARKN 37
|
|
| PRK05035 |
PRK05035 |
electron transport complex protein RnfC; Provisional |
432-609 |
2.46e-06 |
|
electron transport complex protein RnfC; Provisional
Pssm-ID: 235334 [Multi-domain] Cd Length: 695 Bit Score: 50.72 E-value: 2.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 432 AAEHASKVAKEKGSDALEYAKDKGSDAADYAKVKGS---DAAEYAKDRGSSAAEYVQEKGSEAATQASKVAKKKGAEASK 508
Cdd:PRK05035 476 AAEARAAKDKDAVAAALARVKAKKAAATQPIVIKAGarpDNSAVIAAREARKAQARARQAEKQAAAAADPKKAAVAAAIA 555
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 509 LAKEKgKDAKEYAMEKGSDATDYAKSKGSDAAEYAKEKGADAAEYAKEKGADAAEYAKEKGADTAEYAKEKGADAADYAK 588
Cdd:PRK05035 556 RAKAK-KAAQQAANAEAEEEVDPKKAAVAAAIARAKAKKAAQQAASAEPEEQVAEVDPKKAAVAAAIARAKAKKAEQQAN 634
|
170 180
....*....|....*....|.
gi 255715811 589 DKSYSAAGYAKEKTSDAAAYA 609
Cdd:PRK05035 635 AEPEEPVDPRKAAVAAAIARA 655
|
|
| Ish1 |
pfam10281 |
Putative nuclear envelope organization protein; This entry represents a repeat found in the ... |
642-677 |
3.03e-05 |
|
Putative nuclear envelope organization protein; This entry represents a repeat found in the fungal protein Ish1, a protein which has a role in nuclear membrane organization.
Pssm-ID: 431195 Cd Length: 37 Bit Score: 41.26 E-value: 3.03e-05
10 20 30
....*....|....*....|....*....|....*..
gi 255715811 642 FSSWSMDDLKGYAKSFGIRTGP-TTTREKLVHQVKEN 677
Cdd:pfam10281 1 FDTWSDSDLKAWLDSHGIPVSPqGSTRDELLKLARKN 37
|
|
| Ish1 |
pfam10281 |
Putative nuclear envelope organization protein; This entry represents a repeat found in the ... |
222-259 |
4.95e-05 |
|
Putative nuclear envelope organization protein; This entry represents a repeat found in the fungal protein Ish1, a protein which has a role in nuclear membrane organization.
Pssm-ID: 431195 Cd Length: 37 Bit Score: 40.88 E-value: 4.95e-05
10 20 30
....*....|....*....|....*....|....*...
gi 255715811 222 FNSWSTKELGEWLRSHKVKLEDKAShDRKYLLNVAQKN 259
Cdd:pfam10281 1 FDTWSDSDLKAWLDSHGIPVSPQGS-TRDELLKLARKN 37
|
|
| ElaB |
COG4575 |
Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD ... |
506-598 |
1.76e-04 |
|
Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family [Translation, ribosomal structure and biogenesis];
Pssm-ID: 443632 [Multi-domain] Cd Length: 108 Bit Score: 41.47 E-value: 1.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 506 ASKLAKEKGKDAKEYAMEKGSDATDYAKSKGSDAAEYAKEKGADAAEYAKEKGADAAEYAKEKGADTAEYAKEKGADAAD 585
Cdd:COG4575 2 ANTKTTTSVEDSKEDLEADLKALVDDLEELLKSTADDAGEKAAELREKAEAALDEARERLSEAEDAAVERAREAADAADD 81
|
90
....*....|...
gi 255715811 586 YAKDKSYSAAGYA 598
Cdd:COG4575 82 YVHENPWQSVGIA 94
|
|
| Ish1 |
pfam10281 |
Putative nuclear envelope organization protein; This entry represents a repeat found in the ... |
93-128 |
7.39e-04 |
|
Putative nuclear envelope organization protein; This entry represents a repeat found in the fungal protein Ish1, a protein which has a role in nuclear membrane organization.
Pssm-ID: 431195 Cd Length: 37 Bit Score: 37.41 E-value: 7.39e-04
10 20 30
....*....|....*....|....*....|....*..
gi 255715811 93 FDSWSAKDLRKLLSKNKVK-FDVEASRDELAQAAKKN 128
Cdd:pfam10281 1 FDTWSDSDLKAWLDSHGIPvSPQGSTRDELLKLARKN 37
|
|
| tolA_full |
TIGR02794 |
TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the ... |
432-588 |
1.13e-03 |
|
TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]
Pssm-ID: 274303 [Multi-domain] Cd Length: 346 Bit Score: 41.75 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 432 AAEHASKVAKEKGSDALEYAKDKGSDAADYAKVKGSDAAEYAKDRGSSAAEYVQEKGSEAATQASKVAKKKGAE--ASKL 509
Cdd:TIGR02794 73 LEQQAEEAEKQRAAEQARQKELEQRAAAEKAAKQAEQAAKQAEEKQKQAEEAKAKQAAEAKAKAEAEAERKAKEeaAKQA 152
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 255715811 510 AKEKGKDAKEYAMEKGSDATDYAKSKGSDAAEyAKEKGadAAEYAKEKGADAAEYAKEKGADTAEYAKEKGADAADYAK 588
Cdd:TIGR02794 153 EEEAKAKAAAEAKKKAEEAKKKAEAEAKAKAE-AEAKA--KAEEAKAKAEAAKAKAAAEAAAKAEAEAAAAAAAEAERK 228
|
|
| growth_prot_Scy |
NF041483 |
polarized growth protein Scy; |
403-605 |
2.10e-03 |
|
polarized growth protein Scy;
Pssm-ID: 469371 [Multi-domain] Cd Length: 1293 Bit Score: 41.74 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 403 ASNKVSEIMGHAQKKGGEAADYAMDKGNNAAE---HASKVAKEKGSDALEYAKDKGSDAADYAKVKGSDAAEYAKDRGSS 479
Cdd:NF041483 853 AERTVSEAIAEAERLRSDASEYAQRVRTEASDtlaSAEQDAARTRADAREDANRIRSDAAAQADRLIGEATSEAERLTAE 932
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 480 AAEYVQEKGSEAATQASKVAKKKGAEASKLAKEKGKDAKEYAMEkGSDATDYAKSKGSDAAEYAKEKGADAAEYAKEKGA 559
Cdd:NF041483 933 ARAEAERLRDEARAEAERVRADAAAQAEQLIAEATGEAERLRAE-AAETVGSAQQHAERIRTEAERVKAEAAAEAERLRT 1011
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 255715811 560 DAAEYAKEKGADTAEYAKEKGADAADYAKDKSYSAAGYAKEKTSDA 605
Cdd:NF041483 1012 EAREEADRTLDEARKDANKRRSEAAEQADTLITEAAAEADQLTAKA 1057
|
|
| growth_prot_Scy |
NF041483 |
polarized growth protein Scy; |
396-607 |
4.32e-03 |
|
polarized growth protein Scy;
Pssm-ID: 469371 [Multi-domain] Cd Length: 1293 Bit Score: 40.58 E-value: 4.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 396 SSGVYKSASNKVSEIMGHAQKKGGEAADYAMDKGNNAAEHASKVaKEKGSDALEYAKDKGS---DAADYAKVKGSDAAEY 472
Cdd:NF041483 737 SEELLASARKRVEEAQAEAQRLVEEADRRATELVSAAEQTAQQV-RDSVAGLQEQAEEEIAglrSAAEHAAERTRTEAQE 815
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 473 AKDRGSSAAEYVQEKGSEAATQASKVAKKKGAEASKLAKEKGKDAKEYAMEKGSDATDYA---KSKGSD----AAEYAKE 545
Cdd:NF041483 816 EADRVRSDAYAERERASEDANRLRREAQEETEAAKALAERTVSEAIAEAERLRSDASEYAqrvRTEASDtlasAEQDAAR 895
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 255715811 546 KGADAAEYAKEKGADAAEYAKEKGADTAEYAKEKGADAADYAKDKSYSAAGYAKEKTSDAAA 607
Cdd:NF041483 896 TRADAREDANRIRSDAAAQADRLIGEATSEAERLTAEARAEAERLRDEARAEAERVRADAAA 957
|
|
| growth_prot_Scy |
NF041483 |
polarized growth protein Scy; |
432-585 |
5.72e-03 |
|
polarized growth protein Scy;
Pssm-ID: 469371 [Multi-domain] Cd Length: 1293 Bit Score: 40.19 E-value: 5.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 432 AAEHASKV---AKEKGSDALEYAKDKGSDAADYAKVKGSDAAEYAkdrgssaaEYVQEKGSEAATQASKVAKKKGAEASK 508
Cdd:NF041483 831 ASEDANRLrreAQEETEAAKALAERTVSEAIAEAERLRSDASEYA--------QRVRTEASDTLASAEQDAARTRADARE 902
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 255715811 509 LAKEKGKDAKEYAMEKGSDATDYAKSKGSDAAEYAKEKGADAAEYAKEKGADAAEYAKEKGADTAEYAKEKGADAAD 585
Cdd:NF041483 903 DANRIRSDAAAQADRLIGEATSEAERLTAEARAEAERLRDEARAEAERVRADAAAQAEQLIAEATGEAERLRAEAAE 979
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ish1 |
pfam10281 |
Putative nuclear envelope organization protein; This entry represents a repeat found in the ... |
148-184 |
8.68e-07 |
|
Putative nuclear envelope organization protein; This entry represents a repeat found in the fungal protein Ish1, a protein which has a role in nuclear membrane organization.
Pssm-ID: 431195 Cd Length: 37 Bit Score: 45.89 E-value: 8.68e-07
10 20 30
....*....|....*....|....*....|....*..
gi 255715811 148 FQNWDEYDLTSWLDEYKVPYDKAHAKKDELLSKVREN 184
Cdd:pfam10281 1 FDTWSDSDLKAWLDSHGIPVSPQGSTRDELLKLARKN 37
|
|
| PRK05035 |
PRK05035 |
electron transport complex protein RnfC; Provisional |
432-609 |
2.46e-06 |
|
electron transport complex protein RnfC; Provisional
Pssm-ID: 235334 [Multi-domain] Cd Length: 695 Bit Score: 50.72 E-value: 2.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 432 AAEHASKVAKEKGSDALEYAKDKGSDAADYAKVKGS---DAAEYAKDRGSSAAEYVQEKGSEAATQASKVAKKKGAEASK 508
Cdd:PRK05035 476 AAEARAAKDKDAVAAALARVKAKKAAATQPIVIKAGarpDNSAVIAAREARKAQARARQAEKQAAAAADPKKAAVAAAIA 555
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 509 LAKEKgKDAKEYAMEKGSDATDYAKSKGSDAAEYAKEKGADAAEYAKEKGADAAEYAKEKGADTAEYAKEKGADAADYAK 588
Cdd:PRK05035 556 RAKAK-KAAQQAANAEAEEEVDPKKAAVAAAIARAKAKKAAQQAASAEPEEQVAEVDPKKAAVAAAIARAKAKKAEQQAN 634
|
170 180
....*....|....*....|.
gi 255715811 589 DKSYSAAGYAKEKTSDAAAYA 609
Cdd:PRK05035 635 AEPEEPVDPRKAAVAAAIARA 655
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
406-601 |
4.28e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.52 E-value: 4.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 406 KVSEIMGHAQ-KKGGEAADYAMDKGNNAAEHASKVAKEKGSDAlEYAKDKGSDAADYAKV--KGSDAAEYAKDRGSSAAE 482
Cdd:PTZ00121 1303 KADEAKKKAEeAKKADEAKKKAEEAKKKADAAKKKAEEAKKAA-EAAKAEAEAAADEAEAaeEKAEAAEKKKEEAKKKAD 1381
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 483 YVQEKGSEA--ATQASKVA---KKKGAEASKLAKEKGK--DAKEYAMEKGSDATDYAKSKGSDAAEYAKEKGADA--AEY 553
Cdd:PTZ00121 1382 AAKKKAEEKkkADEAKKKAeedKKKADELKKAAAAKKKadEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAkkAEE 1461
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 255715811 554 AKEKGADA--AEYAKEKG--ADTAEYAKEKgadaADYAKDKSYSAAGYAKEK 601
Cdd:PTZ00121 1462 AKKKAEEAkkADEAKKKAeeAKKADEAKKK----AEEAKKKADEAKKAAEAK 1509
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
452-636 |
1.66e-05 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 47.88 E-value: 1.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 452 KDKGSDAADYAKVKGSDAAEYAKD-RGSSAAEYVQEKGSEAATQASKVAKKKGAEASKLAKEKGKDAKEYAMEKGSDATD 530
Cdd:PRK09510 68 QQQQKSAKRAEEQRKKKEQQQAEElQQKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAALKQKQAEEAAAKAAAAAKA 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 531 YAKSKGSDAAEYAKEKGADA-----AEYAKEKGADAAEYAKEKGADTAEYAKEKGADAADYAKDKSYSAAGYAKEKTSDA 605
Cdd:PRK09510 148 KAEAEAKRAAAAAKKAAAEAkkkaeAEAAKKAAAEAKKKAEAEAAAKAAAEAKKKAEAEAKKKAAAEAKKKAAAEAKAAA 227
|
170 180 190
....*....|....*....|....*....|.
gi 255715811 606 AAYAKEKGADAAAAAQAKGSELSDAVADKAD 636
Cdd:PRK09510 228 AKAAAEAKAAAEKAAAAKAAEKAAAAKAAAE 258
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
385-601 |
1.67e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.60 E-value: 1.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 385 EWVKDKNDDITSSGVYKSASNKVSEIMGHAQKKGGEAADyamdKGNNAAEHASKVAKEKGSDALEYAKDKgsDAADYAKV 464
Cdd:PTZ00121 1325 EEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAE----EKAEAAEKKKEEAKKKADAAKKKAEEK--KKADEAKK 1398
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 465 KGSDAAEYAKDRGSSAAEyvQEKGSEAATQASKvaKKKGAEASKLAKEKGK--DAKEYAMEKGSDATDYAKSKGSDAAEY 542
Cdd:PTZ00121 1399 KAEEDKKKADELKKAAAA--KKKADEAKKKAEE--KKKADEAKKKAEEAKKadEAKKKAEEAKKAEEAKKKAEEAKKADE 1474
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 255715811 543 AKEKGADA--AEYAKEKGADAAEYAKEkgADTAEYAKEKGADAADYAKDKSYSAAGYAKEK 601
Cdd:PTZ00121 1475 AKKKAEEAkkADEAKKKAEEAKKKADE--AKKAAEAKKKADEAKKAEEAKKADEAKKAEEA 1533
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
432-607 |
1.74e-05 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 48.05 E-value: 1.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 432 AAEHASKVAKEKGSDALEyAKDKGSDAADYAKVKGSDAAEYAKDRGSSAAEYVQEKGSEAATQASKVAKKKGAEASKLak 511
Cdd:PRK13108 287 GSEYVVDEALEREPAELA-AAAVASAASAVGPVGPGEPNQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAV-- 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 512 ekgKDAKEYAMEKgsdatdyaKSKGSDAAEYAKEKGADAAEYAKEKGADAAEYAKEKGAdTAEYAKEKGADAADYAKDKS 591
Cdd:PRK13108 364 ---EETSEADIER--------EQPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDE-TEPEVPEKAAPIPDPAKPDE 431
|
170
....*....|....*.
gi 255715811 592 YSAAGYAKEKTSDAAA 607
Cdd:PRK13108 432 LAVAGPGDDPAEPDGI 447
|
|
| PRK07735 |
PRK07735 |
NADH-quinone oxidoreductase subunit C; |
427-607 |
2.67e-05 |
|
NADH-quinone oxidoreductase subunit C;
Pssm-ID: 236081 [Multi-domain] Cd Length: 430 Bit Score: 47.28 E-value: 2.67e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 427 DKGNNAAEHASKVAKEKGSDALEYAKDKGSDAA-----DYAKVKGSDAAEyAKDRGSSAAEYVQEKGSEAATQASKVAKK 501
Cdd:PRK07735 51 NDDMTIEEAKRRAAAAAKAKAAALAKQKREGTEevteeEKAKAKAKAAAA-AKAKAAALAKQKREGTEEVTEEEKAAAKA 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 502 KGAEASKLAKEKGKDAKEYAMEKGSD---ATDYAKSKGSDAAEYAKEKGADAAEYAKEKGADAAEYA-KEKGADTAEYAK 577
Cdd:PRK07735 130 KAAAAAKAKAAALAKQKREGTEEVTEeeeETDKEKAKAKAAAAAKAKAAALAKQKAAEAGEGTEEVTeEEKAKAKAKAAA 209
|
170 180 190
....*....|....*....|....*....|
gi 255715811 578 EKGADAADYAKDKSYSAAGYAKEKTSDAAA 607
Cdd:PRK07735 210 AAKAKAAALAKQKASQGNGDSGDEDAKAKA 239
|
|
| Ish1 |
pfam10281 |
Putative nuclear envelope organization protein; This entry represents a repeat found in the ... |
642-677 |
3.03e-05 |
|
Putative nuclear envelope organization protein; This entry represents a repeat found in the fungal protein Ish1, a protein which has a role in nuclear membrane organization.
Pssm-ID: 431195 Cd Length: 37 Bit Score: 41.26 E-value: 3.03e-05
10 20 30
....*....|....*....|....*....|....*..
gi 255715811 642 FSSWSMDDLKGYAKSFGIRTGP-TTTREKLVHQVKEN 677
Cdd:pfam10281 1 FDTWSDSDLKAWLDSHGIPVSPqGSTRDELLKLARKN 37
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
441-581 |
3.64e-05 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 46.72 E-value: 3.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 441 KEKGSDALEYAKDKGSDAADYAKVKGSDAAEYAKDRGSSAAEYVQEKGSEAATQASKVAKKKGA-EASKLAKEKGKDAKE 519
Cdd:PRK09510 117 KKQAEEAAKQAALKQKQAEEAAAKAAAAAKAKAEAEAKRAAAAAKKAAAEAKKKAEAEAAKKAAaEAKKKAEAEAAAKAA 196
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 255715811 520 YAMEKGSDATDYAKSKGSDAAEYAKEKGADAAEYAKEKGADAAEYAKEKGADTAEYAKEKGA 581
Cdd:PRK09510 197 AEAKKKAEAEAKKKAAAEAKKKAAAEAKAAAAKAAAEAKAAAEKAAAAKAAEKAAAAKAAAE 258
|
|
| Ish1 |
pfam10281 |
Putative nuclear envelope organization protein; This entry represents a repeat found in the ... |
222-259 |
4.95e-05 |
|
Putative nuclear envelope organization protein; This entry represents a repeat found in the fungal protein Ish1, a protein which has a role in nuclear membrane organization.
Pssm-ID: 431195 Cd Length: 37 Bit Score: 40.88 E-value: 4.95e-05
10 20 30
....*....|....*....|....*....|....*...
gi 255715811 222 FNSWSTKELGEWLRSHKVKLEDKAShDRKYLLNVAQKN 259
Cdd:pfam10281 1 FDTWSDSDLKAWLDSHGIPVSPQGS-TRDELLKLARKN 37
|
|
| ElaB |
COG4575 |
Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD ... |
506-598 |
1.76e-04 |
|
Membrane-anchored ribosome-binding protein ElaB, inhibits growth in stationary phase, YqjD/DUF883 family [Translation, ribosomal structure and biogenesis];
Pssm-ID: 443632 [Multi-domain] Cd Length: 108 Bit Score: 41.47 E-value: 1.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 506 ASKLAKEKGKDAKEYAMEKGSDATDYAKSKGSDAAEYAKEKGADAAEYAKEKGADAAEYAKEKGADTAEYAKEKGADAAD 585
Cdd:COG4575 2 ANTKTTTSVEDSKEDLEADLKALVDDLEELLKSTADDAGEKAAELREKAEAALDEARERLSEAEDAAVERAREAADAADD 81
|
90
....*....|...
gi 255715811 586 YAKDKSYSAAGYA 598
Cdd:COG4575 82 YVHENPWQSVGIA 94
|
|
| PRK13808 |
PRK13808 |
adenylate kinase; Provisional |
419-558 |
2.57e-04 |
|
adenylate kinase; Provisional
Pssm-ID: 172341 [Multi-domain] Cd Length: 333 Bit Score: 43.72 E-value: 2.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 419 GEAADYAMDKGNNAAEHASKVAKEKGSDALEYAKDKGSDAADYAKVKGSDAAEYAKDRGSSAAEYVQeKGSEAATQASKV 498
Cdd:PRK13808 195 GAANAKKAAKTPAAKSGAKKASAKAKSAAKKVSKKKAAKTAVSAKKAAKTAAKAAKKAKKTAKKALK-KAAKAVKKAAKK 273
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 499 AKKKGAEASKLAKEKGKDAKEYAMEKGSDATDYAKSKGSDAAEYAKEKGADAAEYAKEKG 558
Cdd:PRK13808 274 AAKAAAKAAKGAAKATKGKAKAKKKAGKKAAAGSKAKATAKAPKRGAKGKKAKKVTKKRA 333
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
433-637 |
3.57e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.98 E-value: 3.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 433 AEHASKVAKEKGSDALEYAKDKgsDAADYAKVKGSDA--AEYAKDRGSSAAEYVQE--KGSEAATQASKVAKKKGAEASK 508
Cdd:PTZ00121 1280 ADELKKAEEKKKADEAKKAEEK--KKADEAKKKAEEAkkADEAKKKAEEAKKKADAakKKAEEAKKAAEAAKAEAEAAAD 1357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 509 LAK--EKGKDAKEYAMEKGSDATDYAKSKGSDA--AEYAKEKGADA---------AEYAKEKGADAAEYAKEKgaDTAEY 575
Cdd:PTZ00121 1358 EAEaaEEKAEAAEKKKEEAKKKADAAKKKAEEKkkADEAKKKAEEDkkkadelkkAAAAKKKADEAKKKAEEK--KKADE 1435
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 255715811 576 AKEKGADA--ADYAKDKSYSA--AGYAKEKTSDAAAYAKEKGADAAAAAQAKGSELSDAVADKADE 637
Cdd:PTZ00121 1436 AKKKAEEAkkADEAKKKAEEAkkAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADE 1501
|
|
| PRK05901 |
PRK05901 |
RNA polymerase sigma factor; Provisional |
425-633 |
5.45e-04 |
|
RNA polymerase sigma factor; Provisional
Pssm-ID: 235640 [Multi-domain] Cd Length: 509 Bit Score: 43.06 E-value: 5.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 425 AMDKGNNAAEHASKVAKEKGSDALEYAKDKGSDAA-DYAKVKGSDAAEYAKDRGSSAAEYVQEKGSEAATQASKVAKKKG 503
Cdd:PRK05901 1 MTTASTKAELAAEEEAKKKLKKLAAKSKSKGFITKeEIKEALESKKKTPEQIDQVLIFLSGMVKDTDDATESDIPKKKTK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 504 AEASKLA-KEKGKDAKEYAMEKGSDATDYAKSKGSDAAEYAKEKGADAAEYAKEKGADAAEYAKEKGADTAEYAKEKGAD 582
Cdd:PRK05901 81 TAAKAAAaKAPAKKKLKDELDSSKKAEKKNALDKDDDLNYVKDIDVLNQADDDDDDDDDDDLDDDDIDDDDDDEDDDEDD 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 255715811 583 AADYAKDKSYSAAGYA-KEKTSDAAAYAKEKGADAAAAAQAKGSELsDAVAD 633
Cdd:PRK05901 161 DDDDVDDEDEEKKEAKeLEKLSDDDDFVWDEDDSEALRQARKDAKL-TATAD 211
|
|
| Ish1 |
pfam10281 |
Putative nuclear envelope organization protein; This entry represents a repeat found in the ... |
93-128 |
7.39e-04 |
|
Putative nuclear envelope organization protein; This entry represents a repeat found in the fungal protein Ish1, a protein which has a role in nuclear membrane organization.
Pssm-ID: 431195 Cd Length: 37 Bit Score: 37.41 E-value: 7.39e-04
10 20 30
....*....|....*....|....*....|....*..
gi 255715811 93 FDSWSAKDLRKLLSKNKVK-FDVEASRDELAQAAKKN 128
Cdd:pfam10281 1 FDTWSDSDLKAWLDSHGIPvSPQGSTRDELLKLARKN 37
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
414-577 |
7.74e-04 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 42.49 E-value: 7.74e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 414 AQKKGGEAADYAMDKGNNAAEHASKVAKEKGSDALEYAKDKGSDAADYAKVKGSDAAEYAKDRGSSAAEYVQEKGSEAAT 493
Cdd:PRK09510 130 KQKQAEEAAAKAAAAAKAKAEAEAKRAAAAAKKAAAEAKKKAEAEAAKKAAAEAKKKAEAEAAAKAAAEAKKKAEAEAKK 209
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 494 QASKVAKKKGAEASKLAKEKGKDAKEYAMEKGSDATDYAKSK--------------GSDAAEYAKEKGADAAEYAKEKGA 559
Cdd:PRK09510 210 KAAAEAKKKAAAEAKAAAAKAAAEAKAAAEKAAAAKAAEKAAaakaaaevddlfggLDSGKNAPKTGGGAKGNGAQGAGA 289
|
170
....*....|....*...
gi 255715811 560 DAAEYAKEKGADTAEYAK 577
Cdd:PRK09510 290 GNGKKGGASGADIDQYAG 307
|
|
| tolA_full |
TIGR02794 |
TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the ... |
432-588 |
1.13e-03 |
|
TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]
Pssm-ID: 274303 [Multi-domain] Cd Length: 346 Bit Score: 41.75 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 432 AAEHASKVAKEKGSDALEYAKDKGSDAADYAKVKGSDAAEYAKDRGSSAAEYVQEKGSEAATQASKVAKKKGAE--ASKL 509
Cdd:TIGR02794 73 LEQQAEEAEKQRAAEQARQKELEQRAAAEKAAKQAEQAAKQAEEKQKQAEEAKAKQAAEAKAKAEAEAERKAKEeaAKQA 152
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 255715811 510 AKEKGKDAKEYAMEKGSDATDYAKSKGSDAAEyAKEKGadAAEYAKEKGADAAEYAKEKGADTAEYAKEKGADAADYAK 588
Cdd:TIGR02794 153 EEEAKAKAAAEAKKKAEEAKKKAEAEAKAKAE-AEAKA--KAEEAKAKAEAAKAKAAAEAAAKAEAEAAAAAAAEAERK 228
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
416-578 |
1.20e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.44 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 416 KKGGEAADYAMDKGNNAAEHASKVAKEKGSDALEyAKDKGSDAADYAKVKGSDA--AEYAKDRGSSA--AEYVQEKGSEA 491
Cdd:PTZ00121 1391 KKADEAKKKAEEDKKKADELKKAAAAKKKADEAK-KKAEEKKKADEAKKKAEEAkkADEAKKKAEEAkkAEEAKKKAEEA 1469
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 492 atQASKVAKKKGAEASKL--AKEKGKDAKEYAMEKGSDATdyAKSKGSDAAEYAKEKGADAAEYAKE-KGADAAEYAKE- 567
Cdd:PTZ00121 1470 --KKADEAKKKAEEAKKAdeAKKKAEEAKKKADEAKKAAE--AKKKADEAKKAEEAKKADEAKKAEEaKKADEAKKAEEk 1545
|
170
....*....|.
gi 255715811 568 KGADTAEYAKE 578
Cdd:PTZ00121 1546 KKADELKKAEE 1556
|
|
| PRK05035 |
PRK05035 |
electron transport complex protein RnfC; Provisional |
420-607 |
1.22e-03 |
|
electron transport complex protein RnfC; Provisional
Pssm-ID: 235334 [Multi-domain] Cd Length: 695 Bit Score: 42.24 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 420 EAADYAMDKGNNAAEHASKVAKEKGSDALEYAKDKGSDAADYAKVKGSDAAEYAKDRGSSAAEYV--------------- 484
Cdd:PRK05035 475 KAAEARAAKDKDAVAAALARVKAKKAAATQPIVIKAGARPDNSAVIAAREARKAQARARQAEKQAaaaadpkkaavaaai 554
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 485 -------QEKGSEAATQASKVAKKKGAEASKLAKEKGKDA----KEYAMEKGSDATDYAKSKGSDAAEYAKEKGADAAEY 553
Cdd:PRK05035 555 arakakkAAQQAANAEAEEEVDPKKAAVAAAIARAKAKKAaqqaASAEPEEQVAEVDPKKAAVAAAIARAKAKKAEQQAN 634
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 255715811 554 AKE-------KGADAAEYAKEKGADTAEYAKEKGADAADYAKdKSYSAAGYAKEKTSDAAA 607
Cdd:PRK05035 635 AEPeepvdprKAAVAAAIARAKARKAAQQQANAEPEEAEDPK-KAAVAAAIARAKAKKAAQ 694
|
|
| PRK07735 |
PRK07735 |
NADH-quinone oxidoreductase subunit C; |
432-606 |
1.48e-03 |
|
NADH-quinone oxidoreductase subunit C;
Pssm-ID: 236081 [Multi-domain] Cd Length: 430 Bit Score: 41.50 E-value: 1.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 432 AAEHASKVAKEKGSDALEYAKDKGSDAADYAKVKGSDAAEyAKDRGSSAAEYVQEKGSEAATQASKVAKKKGAEASK--- 508
Cdd:PRK07735 27 VAKHGAEISKLEEENREKEKALPKNDDMTIEEAKRRAAAA-AKAKAAALAKQKREGTEEVTEEEKAKAKAKAAAAAKaka 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 509 --LAKEKGKDAKEYAMEKGSDATDYAKSKG-SDAAEYAKEKGADAAEYAKEKGADAAEYAKEKGADTAE-----YAKEKG 580
Cdd:PRK07735 106 aaLAKQKREGTEEVTEEEKAAAKAKAAAAAkAKAAALAKQKREGTEEVTEEEEETDKEKAKAKAAAAAKakaaaLAKQKA 185
|
170 180
....*....|....*....|....*.
gi 255715811 581 ADAADYAKDKSYSAAGYAKEKTSDAA 606
Cdd:PRK07735 186 AEAGEGTEEVTEEEKAKAKAKAAAAA 211
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
433-637 |
1.51e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.05 E-value: 1.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 433 AEHASKVAKEKGSDAL---EYAKDKGSDAADYAKVKGSDAA-EYAKDRGSSAAEYVQEKGSEAATQASKVAK---KKGAE 505
Cdd:PTZ00121 1214 AEEARKAEDAKKAEAVkkaEEAKKDAEEAKKAEEERNNEEIrKFEEARMAHFARRQAAIKAEEARKADELKKaeeKKKAD 1293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 506 ASKLAKEKGK--DAKEYAMEKgsDATDYAKSKgsdaAEYAKEKGADAAEYAKE-KGADAAEYAKEKGADTAEYAKEKGAD 582
Cdd:PTZ00121 1294 EAKKAEEKKKadEAKKKAEEA--KKADEAKKK----AEEAKKKADAAKKKAEEaKKAAEAAKAEAEAAADEAEAAEEKAE 1367
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 255715811 583 AADYAKDKSYSAAGYAKEKTSDAAAYAKEKGADAAAAAQAKGSELSDAVADKADE 637
Cdd:PTZ00121 1368 AAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADE 1422
|
|
| PRK07735 |
PRK07735 |
NADH-quinone oxidoreductase subunit C; |
421-601 |
1.98e-03 |
|
NADH-quinone oxidoreductase subunit C;
Pssm-ID: 236081 [Multi-domain] Cd Length: 430 Bit Score: 41.12 E-value: 1.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 421 AADYAMDKGNNAAEHASKVAKEKGSDALEYAKDKgsdAADYAKVKGSDAAEYAKDRGSSAAEYVQEKGSEAAtqASKVAK 500
Cdd:PRK07735 97 AAAAAKAKAAALAKQKREGTEEVTEEEKAAAKAK---AAAAAKAKAAALAKQKREGTEEVTEEEEETDKEKA--KAKAAA 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 501 KKGAEASKLAKEKGKDAKEYAMEKGSDATDYAKSKgsdAAEYAKEKGADAA--EYAKEKGADAAEYAKEKGADTAEyAKe 578
Cdd:PRK07735 172 AAKAKAAALAKQKAAEAGEGTEEVTEEEKAKAKAK---AAAAAKAKAAALAkqKASQGNGDSGDEDAKAKAIAAAK-AK- 246
|
170 180
....*....|....*....|...
gi 255715811 579 kgADAADYAKDKSYSAAGYAKEK 601
Cdd:PRK07735 247 --AAAAARAKTKGAEGKKEEEPK 267
|
|
| growth_prot_Scy |
NF041483 |
polarized growth protein Scy; |
403-605 |
2.10e-03 |
|
polarized growth protein Scy;
Pssm-ID: 469371 [Multi-domain] Cd Length: 1293 Bit Score: 41.74 E-value: 2.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 403 ASNKVSEIMGHAQKKGGEAADYAMDKGNNAAE---HASKVAKEKGSDALEYAKDKGSDAADYAKVKGSDAAEYAKDRGSS 479
Cdd:NF041483 853 AERTVSEAIAEAERLRSDASEYAQRVRTEASDtlaSAEQDAARTRADAREDANRIRSDAAAQADRLIGEATSEAERLTAE 932
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 480 AAEYVQEKGSEAATQASKVAKKKGAEASKLAKEKGKDAKEYAMEkGSDATDYAKSKGSDAAEYAKEKGADAAEYAKEKGA 559
Cdd:NF041483 933 ARAEAERLRDEARAEAERVRADAAAQAEQLIAEATGEAERLRAE-AAETVGSAQQHAERIRTEAERVKAEAAAEAERLRT 1011
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 255715811 560 DAAEYAKEKGADTAEYAKEKGADAADYAKDKSYSAAGYAKEKTSDA 605
Cdd:NF041483 1012 EAREEADRTLDEARKDANKRRSEAAEQADTLITEAAAEADQLTAKA 1057
|
|
| PRK12373 |
PRK12373 |
NADH-quinone oxidoreductase subunit E; |
488-582 |
3.04e-03 |
|
NADH-quinone oxidoreductase subunit E;
Pssm-ID: 237082 [Multi-domain] Cd Length: 400 Bit Score: 40.56 E-value: 3.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 488 GSEAATQASKVAKKKGAEASKLAKEKGKDAKEYAMEKGSDATDYAKSKGSDAAEYAKEKGADAAEYA-KEKGADAAEYAK 566
Cdd:PRK12373 225 GTEVPLLAPWQGDAAPVPPSEAARPKSADAETNAALKTPATAPKAAAKNAKAPEAQPVSGTAAAEPApKEAAKAAAAAAK 304
|
90
....*....|....*....
gi 255715811 567 EKGAD---TAEYAKEKGAD 582
Cdd:PRK12373 305 PALEDkprPLGIARPGGAD 323
|
|
| growth_prot_Scy |
NF041483 |
polarized growth protein Scy; |
396-607 |
4.32e-03 |
|
polarized growth protein Scy;
Pssm-ID: 469371 [Multi-domain] Cd Length: 1293 Bit Score: 40.58 E-value: 4.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 396 SSGVYKSASNKVSEIMGHAQKKGGEAADYAMDKGNNAAEHASKVaKEKGSDALEYAKDKGS---DAADYAKVKGSDAAEY 472
Cdd:NF041483 737 SEELLASARKRVEEAQAEAQRLVEEADRRATELVSAAEQTAQQV-RDSVAGLQEQAEEEIAglrSAAEHAAERTRTEAQE 815
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 473 AKDRGSSAAEYVQEKGSEAATQASKVAKKKGAEASKLAKEKGKDAKEYAMEKGSDATDYA---KSKGSD----AAEYAKE 545
Cdd:NF041483 816 EADRVRSDAYAERERASEDANRLRREAQEETEAAKALAERTVSEAIAEAERLRSDASEYAqrvRTEASDtlasAEQDAAR 895
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 255715811 546 KGADAAEYAKEKGADAAEYAKEKGADTAEYAKEKGADAADYAKDKSYSAAGYAKEKTSDAAA 607
Cdd:NF041483 896 TRADAREDANRIRSDAAAQADRLIGEATSEAERLTAEARAEAERLRDEARAEAERVRADAAA 957
|
|
| growth_prot_Scy |
NF041483 |
polarized growth protein Scy; |
432-585 |
5.72e-03 |
|
polarized growth protein Scy;
Pssm-ID: 469371 [Multi-domain] Cd Length: 1293 Bit Score: 40.19 E-value: 5.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 255715811 432 AAEHASKV---AKEKGSDALEYAKDKGSDAADYAKVKGSDAAEYAkdrgssaaEYVQEKGSEAATQASKVAKKKGAEASK 508
Cdd:NF041483 831 ASEDANRLrreAQEETEAAKALAERTVSEAIAEAERLRSDASEYA--------QRVRTEASDTLASAEQDAARTRADARE 902
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 255715811 509 LAKEKGKDAKEYAMEKGSDATDYAKSKGSDAAEYAKEKGADAAEYAKEKGADAAEYAKEKGADTAEYAKEKGADAAD 585
Cdd:NF041483 903 DANRIRSDAAAQADRLIGEATSEAERLTAEARAEAERLRDEARAEAERVRADAAAQAEQLIAEATGEAERLRAEAAE 979
|
|
| |
