|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00139 |
PTZ00139 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional |
1-567 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Pssm-ID: 240286 [Multi-domain] Cd Length: 617 Bit Score: 1234.61 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 1 VHDHFYDAVVVGAGGAGLRAASGLVAHGLKTACISKVFPTRSHTVAAQGGINAALGNMTEDDWRWHAYDTVKGSDWLGDQ 80
Cdd:PTZ00139 25 VIDHTYDAVVVGAGGAGLRAALGLVELGYKTACISKLFPTRSHTVAAQGGINAALGNMTEDDWRWHAYDTVKGSDWLGDQ 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 81 DAIEHMCRLAPQVVLELESYGLPFSRTKEGKIYQRAFGGQSLKFGKGGQAYRCAAAADRTGHAILHTLYGMSLKYDCLFF 160
Cdd:PTZ00139 105 DAIQYMCREAPQAVLELESYGLPFSRTKDGKIYQRAFGGQSLKFGKGGQAYRCAAAADRTGHAMLHTLYGQSLKYDCNFF 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 161 IEYFALDLIMDQDGSCKGVIAMSMEDGSIHRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQF 240
Cdd:PTZ00139 185 IEYFALDLIMDEDGECRGVIAMSMEDGSIHRFRAHYTVIATGGYGRAYFSCTSAHTCTGDGGAMVSRAGLPLQDLEFVQF 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 241 HPTGIFPAGCLMTEGCRGEGGILRNSEGEPFMARYAPTAKDLASRDVVSRAMTLEIREGRGVGPNKDHIYLHLDHLPAET 320
Cdd:PTZ00139 265 HPTGIYGAGCLITEGCRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRAMTIEILEGRGCGPNKDHIYLDLTHLPPET 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 321 LRERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGVPTNWKAQCLNPTESDPNKIVPGLLAAGEAGSASVHGANRLGA 400
Cdd:PTZ00139 345 LHERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGIPTNWKTQVLTQRNGDDDKIVPGLLAAGEAACASVHGANRLGA 424
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 401 NSLLDLVVFGRTAADTVAEIVKPNSPPVTLPKDAGEATIDRFDKIRHAKGPVSTADLRSKLQRTMQTRAPVYRNGDDLKK 480
Cdd:PTZ00139 425 NSLLDIVVFGRAAANTVMEILKPGRPQPDLPKDAGEASIARLDKIRHNKGDISTAQIRKRMQRTMQKHAAVFRIGESLQE 504
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 481 GCEEVREIMKEYKDVGIKDRTLVWNTDLIETLELENLITQAAQTIVSGEARKESRGAHAREDFTERDDKKWMKHSLSYQT 560
Cdd:PTZ00139 505 GVEKIKEIYSDFKDVKIKDKSLVWNTDLIETLELENLLTQAKQTILSAEARKESRGAHARDDFPERDDKNWMKHTLSYIR 584
|
....*..
gi 294955192 561 kpHVEES 567
Cdd:PTZ00139 585 --DVKKG 589
|
|
| PLN00128 |
PLN00128 |
Succinate dehydrogenase [ubiquinone] flavoprotein subunit |
3-558 |
0e+00 |
|
Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Pssm-ID: 177739 [Multi-domain] Cd Length: 635 Bit Score: 1007.85 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 3 DHFYDAVVVGAGGAGLRAASGLVAHGLKTACISKVFPTRSHTVAAQGGINAALGNMTEDDWRWHAYDTVKGSDWLGDQDA 82
Cdd:PLN00128 48 DHTYDAVVVGAGGAGLRAAIGLSEHGFNTACITKLFPTRSHTVAAQGGINAALGNMTEDDWRWHMYDTVKGSDWLGDQDA 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 83 IEHMCRLAPQVVLELESYGLPFSRTKEGKIYQRAFGGQSLKFGKGGQAYRCAAAADRTGHAILHTLYGMSLKYDCLFFIE 162
Cdd:PLN00128 128 IQYMCREAPKAVIELENYGLPFSRTEDGKIYQRAFGGQSLDFGKGGQAYRCACAADRTGHAMLHTLYGQAMKHNTQFFVE 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 163 YFALDLIMDQDGSCKGVIAMSMEDGSIHRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHP 242
Cdd:PLN00128 208 YFALDLIMDSDGACQGVIALNMEDGTLHRFRAHSTILATGGYGRAYFSATSAHTCTGDGNAMVARAGLPLQDLEFVQFHP 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 243 TGIFPAGCLMTEGCRGEGGILRNSEGEPFMARYAPTAKDLASRDVVSRAMTLEIREGRGVGPNKDHIYLHLDHLPAETLR 322
Cdd:PLN00128 288 TGIYGAGCLITEGSRGEGGILRNSEGERFMERYAPTAKDLASRDVVSRSMTMEIREGRGVGPEKDHIYLHLNHLPPEVLK 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 323 ERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGVPTNWKAQCLNPTESDPNKIVPGLLAAGEAGSASVHGANRLGANS 402
Cdd:PLN00128 368 ERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYHGEVVTIKGDDPDAVVPGLMAAGEAACASVHGANRLGANS 447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 403 LLDLVVFGRTAADTVAEIVKPNSPPVTLPKDAGEATIDRFDKIRHAKGPVSTADLRSKLQRTMQTRAPVYRNGDDLKKGC 482
Cdd:PLN00128 448 LLDIVVFGRACANRVAEIAKPGEKQKPLPKDAGEKTIAWLDKLRNANGSLPTSKIRLNMQRVMQNNAAVFRTQETLEEGC 527
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 294955192 483 EEVREIMKEYKDVGIKDRTLVWNTDLIETLELENLITQAAQTIVSGEARKESRGAHAREDFTERDDKKWMKHSLSY 558
Cdd:PLN00128 528 KLIDEAWDSFHDVKVTDRSLIWNSDLIETLELENLLINACITMHSAEARKESRGAHAREDFTKRDDENWMKHTLGY 603
|
|
| sdhA_forward |
TIGR01816 |
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate ... |
28-570 |
0e+00 |
|
succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; Succinate dehydrogenase and fumarate reductase are homologous enzymes reversible in principle but favored under different circumstances. This model represents a narrowly defined clade of the succinate dehydrogenase flavoprotein subunit as found in mitochondria, in Rickettsia, in E. coli and other Proteobacteria, and in a few other lineages. However, this model excludes all known fumarate reductases. It also excludes putative succinate dehydrogenases that appear to diverged before the split between E. coli succinate dehydrogenase and fumarate reductase. [Energy metabolism, TCA cycle]
Pssm-ID: 130875 [Multi-domain] Cd Length: 565 Bit Score: 900.28 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 28 GLKTACISKVFPTRSHTVAAQGGINAALGNMTEDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPFSRT 107
Cdd:TIGR01816 5 GVNTACVTKLFPTRSHTVAAQGGISAALGNMEEDNWRWHMYDTVKGSDWLGDQDAIEYMCKQAPEAVLELEHMGMPFSRT 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 108 KEGKIYQRAFGGQSLKFGKGGQAYRCAAAADRTGHAILHTLYGMSLKYDCLFFIEYFALDLIMdQDGSCKGVIAMSMEDG 187
Cdd:TIGR01816 85 EDGKIYQRPFGGHTRDFGKGGAAERACAAADRTGHAILHTLYQQNLKADTSFFNEYFALDLLM-EDGECRGVIAYCLETG 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 188 SIHRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTGIFPAGCLMTEGCRGEGGILRNSE 267
Cdd:TIGR01816 164 EIHRFRAKAVVLATGGYGRIYFSTTNAHTLTGDGTGMVTRAGLPLQDMEFVQFHPTGIAGAGCLITEGCRGEGGILINAN 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 268 GEPFMARYAPTAKDLASRDVVSRAMTLEIREGRGVGPNKDHIYLHLDHLPAETLRERLPGISETAKIFAGVDVTKEPIPV 347
Cdd:TIGR01816 244 GERFMERYAPTAKDLASRDVVSRSMTLEIREGRGVGPNKDHVYLDLDHLGPEVLEGRLPGISETARTFAGVDPVKDPIPV 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 348 LPTVHYNMGGVPTNWKAQCLNPTEsDPNKIVPGLLAAGEAGSASVHGANRLGANSLLDLVVFGRTAADTVAEIVKPNSPP 427
Cdd:TIGR01816 324 LPTVHYNMGGIPTNYHGQVLRDGN-GNDQIVPGLYAAGEAACVSVHGANRLGTNSLLDLVVFGRAAGLSAAEYAKPGSDV 402
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 428 VTLPKDAGEATIDRFDKIRHAKGPVSTADLRSKLQRTMQTRAPVYRNGDDLKKGCEEVREIMKEYKDVGIKDRTLVWNTD 507
Cdd:TIGR01816 403 KPMPPNAGEESVMRLDKLRFATGGERVAALRLELQRSMQNHAGVFRTGEVLQKGVEKISALKERYKNVKINDKSKVWNTD 482
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 294955192 508 LIETLELENLITQAAQTIVSGEARKESRGAHAREDFTERDDKKWMKHSLSYQTKPHVEESVSY 570
Cdd:TIGR01816 483 LVEALELQNLLECAEATAVSAEARKESRGAHAREDFPERDDENWLKHTLSYVDINTGKVLLSY 545
|
|
| sdhA_frdA_Gneg |
TIGR01812 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial ... |
28-562 |
0e+00 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase. [Energy metabolism, Aerobic, Energy metabolism, Anaerobic, Energy metabolism, TCA cycle]
Pssm-ID: 273815 [Multi-domain] Cd Length: 566 Bit Score: 763.02 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 28 GLKTACISKVFPTRSHTVAAQGGINAALGNM-TEDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPFSR 106
Cdd:TIGR01812 22 GLNTAVISKVYPTRSHTVAAQGGMAAALGNVdPDDSWEWHAYDTVKGSDYLADQDAVEYMCQEAPKAILELEHWGVPFSR 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 107 TKEGKIYQRAFGGQSLKfgkggqayRCAAAADRTGHAILHTLYGMSLKYDCLFFIEYFALDLIMDqDGSCKGVIAMSMED 186
Cdd:TIGR01812 102 TPDGRIAQRPFGGHSKD--------RTCYAADKTGHALLHTLYEQCLKLGVSFFNEYFALDLIHD-DGRVRGVVAYDLKT 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 187 GSIHRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTGIFPAGCLMTEGCRGEGGILRNS 266
Cdd:TIGR01812 173 GEIVFFRAKAVVLATGGYGRIYKTTTNAHINTGDGMAMALRAGVPLKDMEFVQFHPTGLYPSGILITEGCRGEGGYLVNK 252
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 267 EGEPFMARYAPTAKDLASRDVVSRAMTLEIREGRGVG-PNKDHIYLHLDHLPAETLRERLPGISETAKIFAGVDVTKEPI 345
Cdd:TIGR01812 253 NGERFMERYAPEKMELAPRDVVSRAMWTEIREGRGVGsPPGDYVYLDLRHLGEEKIEERLPQIRELAKYFAGVDPVKEPI 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 346 PVLPTVHYNMGGVPTNWKAQCLNPTesdpnkIVPGLLAAGEAGSASVHGANRLGANSLLDLVVFGRTAADTVAEIV-KPN 424
Cdd:TIGR01812 333 PVRPTAHYSMGGIPTDYTGRVICET------IVKGLFAAGECACVSVHGANRLGGNSLLELVVFGRIAGEAAAEYAaKTG 406
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 425 SPPVTLPKDAGEATIDRFDKIRHAKGPVSTADLRSKLQRTMQTRAPVYRNGDDLKKGCEEVREIMKEYKDVGIKDRTLVW 504
Cdd:TIGR01812 407 NPAADIEEEAVKAEEALIDLLVESNGGERVAKIREELGDTMDDNVGIFRTEELLKKAVDEIEELRERYKNVRINDKSKVF 486
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 294955192 505 NTDLIETLELENLITQAAQTIVSGEARKESRGAHAREDFTERDDKKWMKHSLSYQTKP 562
Cdd:TIGR01812 487 NTDLLEALELGNMLDLAEVVAAGALNRKESRGAHAREDYPERDDENWLKHTLAYYDNP 544
|
|
| sdhA |
PRK06069 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
29-565 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 235689 [Multi-domain] Cd Length: 577 Bit Score: 554.67 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 29 LKTACISKVFPTRSHTVAAQGGINAALGNMTEDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPFSRTK 108
Cdd:PRK06069 32 LSVAVVSKTQPMRSHSVSAEGGTAAVLYPEKGDSFDLHAYDTVKGSDFLADQDAVEVFVREAPEEIRFLDHWGVPWSRRP 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 109 EGKIYQRAFGGQSLKfgkggqayRCAAAADRTGHAILHTLYGMSLKYDCL-FFIEYFALDLIMdQDGSCKGVIAMSMEDG 187
Cdd:PRK06069 112 DGRISQRPFGGMSFP--------RTTFAADKTGFYIMHTLYSRALRFDNIhFYDEHFVTSLIV-ENGVFKGVTAIDLKRG 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 188 SIHRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTGIFPAGCLMTEGCRGEGGILRNSE 267
Cdd:PRK06069 183 EFKVFQAKAGIIATGGAGRLYGFTTYAHSVTGDGLAIAYRAGIPLKDMEFVQFHPTGLVPSGILITEAARGEGGYLINKE 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 268 GEPFMARYAPTAKDLASRDVVSRAMTLEIREGRGVGPNKDHIYLHLD--HLPAETLRERLPGISETAKIFAGVDVTKEPI 345
Cdd:PRK06069 263 GERFMKRYAPQKMELAPRDVVSRAIMTEIMEGRGFKHESGLCYVGLDlrHLGEEKINERLPLIREIAKKYAGIDPVTEPI 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 346 PVLPTVHYNMGGVPTNWKAQCLNPTesdpNKIVPGLLAAGEAGSASVHGANRLGANSLLDLVVFGRTAADTVAEIVKPNS 425
Cdd:PRK06069 343 PVRPAAHYTMGGIHTDVYGRVLTAD----GEWVRGLWAAGEAAAVSVHGANRLGSNSTAECLVWGRIAGEQAAEYALKRP 418
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 426 PPVTLPKDAGEATIDR-FDKIRHAKGPVSTADLRSKLQRTMQTRAPVYRNGDDLKKGCEEVREIMKEYKDVGIKDRTLVW 504
Cdd:PRK06069 419 APSSPVEKLAEKEEKRiFDKLLKKEGGEPSYEIRRELNDIMDKNFGIFRDESGLAEALKKIKKLRERYKNVRIEDKSRIY 498
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 294955192 505 NTDLIETLELENLITQAAQTIVSGEARKESRGAHAREDFTERDDKKWMKHSLSYQTK--PHVE 565
Cdd:PRK06069 499 NTDLKDALELDGMLDLAEVVAIGALLRTESRGAHYRLDYPKRDDENWLKHTLAYYTGggPKVT 561
|
|
| sdhA |
PRK05945 |
succinate dehydrogenase/fumarate reductase flavoprotein subunit; |
29-558 |
0e+00 |
|
succinate dehydrogenase/fumarate reductase flavoprotein subunit;
Pssm-ID: 180319 [Multi-domain] Cd Length: 575 Bit Score: 528.15 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 29 LKTACISKVFPTRSHTVAAQGGINAALGNM-TEDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPFSRT 107
Cdd:PRK05945 29 LDVAVVAKTHPIRSHSVAAQGGIAASLKNVdPEDSWEAHAFDTVKGSDYLADQDAVAILTQEAPDVIIDLEHLGVLFSRL 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 108 KEGKIYQRAFGGQSLKfgkggqayRCAAAADRTGHAILHTLYGMSLKYDCLFFIEYFALDLIMdQDGSCKGVIAMSMEDG 187
Cdd:PRK05945 109 PDGRIAQRAFGGHSHN--------RTCYAADKTGHAILHELVNNLRRYGVTIYDEWYVMRLIL-EDNQAKGVVMYHIADG 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 188 SIHRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTGIFPAGCLMTEGCRGEGGILRNSE 267
Cdd:PRK05945 180 RLEVVRAKAVMFATGGYGRVFNTTSNDYASTGDGLAMTAIAGLPLEDMEFVQFHPTGLYPVGVLISEAVRGEGAYLINSE 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 268 GEPFMARYAPTAKDLASRDVVSRAMTLEIREGRGVGPN----KDHIYLHLDHLPAETLRERLPGISETAKIFAGVDVTKE 343
Cdd:PRK05945 260 GDRFMADYAPSRMELAPRDITSRAITLEIRAGRGINPDgsagGPFVYLDLRHMGKEKIMSRVPFCWEEAHRLVGVDAVTE 339
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 344 PIPVLPTVHYNMGGVPTNWKAQCLNptesDPNKIVPGLLAAGEAGSASVHGANRLGANSLLDLVVFGRTAADTVAEIVKP 423
Cdd:PRK05945 340 PMPVRPTVHYCMGGIPVNTDGRVRR----SADGLVEGFFAAGECACVSVHGANRLGSNSLLECVVYGRRTGAAIAEYVQG 415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 424 NSPPVTLPKDAGEATIDRFDKIRHAKGPVSTADLRSKLQRTMQTRAPVYRNGDDLKKGCEEVREIMKEYKDVGIKDRTLV 503
Cdd:PRK05945 416 RKLPEVDEQRYLKEAKQRIQALLDQSGTYRINQLRQQFQDCMTDHCGVFRTEEIMQEGLEKIQQLKQQYEQIYLDDKGKC 495
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 294955192 504 WNTDLIETLELENLITQAAQTIVSGEARKESRGAHAREDFTERDDKKWMKHSLSY 558
Cdd:PRK05945 496 WNTELIEALELRSLMVVGEIILTSALNRQESRGAHSREDYPQRDDQNFLKHTLAY 550
|
|
| PRK09231 |
PRK09231 |
fumarate reductase flavoprotein subunit; Validated |
29-567 |
7.72e-170 |
|
fumarate reductase flavoprotein subunit; Validated
Pssm-ID: 236421 [Multi-domain] Cd Length: 582 Bit Score: 494.15 E-value: 7.72e-170
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 29 LKTACISKVFPTRSHTVAAQGGINAALGNmtEDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPFSRTK 108
Cdd:PRK09231 30 LKIALISKVYPMRSHTVAAEGGSAAVAQD--HDSFDYHFHDTVAGGDWLCEQDVVEYFVHHCPTEMTQLEQWGCPWSRKP 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 109 EGKIYQRAFGGQSLKfgkggqayRCAAAADRTGHAILHTLYGMSLKYDCLF-FIEYFALDLIMDqDGSCKGVIAMSMEDG 187
Cdd:PRK09231 108 DGSVNVRRFGGMKIE--------RTWFAADKTGFHMLHTLFQTSLKYPQIQrFDEHFVLDILVD-DGHVRGLVAMNMMEG 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 188 SIHRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTGIFPAGCLMTEGCRGEGGILRNSE 267
Cdd:PRK09231 179 TLVQIRANAVVMATGGAGRVYRYNTNGGIVTGDGMGMAYRHGVPLRDMEFVQYHPTGLPGSGILMTEGCRGEGGILVNKD 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 268 GEPFMARYA---------PTAK--DLASRDVVSRAMTLEIREGRGV-GPNKDHIYLHLDHLPAETLRERLPGISETAKIF 335
Cdd:PRK09231 259 GYRYLQDYGlgpetplgePKNKymELGPRDKVSQAFWHEWRKGNTIsTPRGDVVYLDLRHLGEKKLHERLPFICELAKAY 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 336 AGVDVTKEPIPVLPTVHYNMGGVPTNwkAQCLNPtesdpnkiVPGLLAAGEAGSASVHGANRLGANSLLDLVVFGRTAAD 415
Cdd:PRK09231 339 VGVDPVKEPIPVRPTAHYTMGGIETD--QNCETR--------IKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRVAGE 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 416 TVAEIVKPNSPPVTLPKDA-GEATIDRFDKIRHAKGPVSTADLRSKLQRTMQTRAPVYRNGDDLKKGCEEVREIMKEYKD 494
Cdd:PRK09231 409 QAAERAATAGPGNEAALDAqAADVEQRLKALVNQEGGENWAKIRDEMGLSMEEGCGIYRTPELMQKTIDKLAELKERFKR 488
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 294955192 495 VGIKDRTLVWNTDLIETLELENLItQAAQTIV-SGEARKESRGAHARED--FTERDDKKWMKHSLSY---QTKPHVEES 567
Cdd:PRK09231 489 VRITDTSSVFNTDLLYTIELGYGL-DVAECMAhSALARKESRGAHQRLDegCTERDDVNFLKHTLAFynaDGTPRIEYS 566
|
|
| sdhA |
PRK06452 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
28-565 |
9.62e-155 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 180567 [Multi-domain] Cd Length: 566 Bit Score: 455.12 E-value: 9.62e-155
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 28 GLKTACISKVFPTRSHTVAAQGGINAAL-GNMT-EDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPFS 105
Cdd:PRK06452 28 GFKVAVISKVFPTRSHSAAAEGGIAAYIpGNSDpNDNPDYMTYDTVKGGDYLVDQDAAELLSNKSGEIVMLLERWGALFN 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 106 RTKEGKIYQRAFGGQSLKfgkggqayRCAAAADRTGHAILHTLYGMSLKYDCLFFIEYFALDLIMDqDGSCKGVIAMSME 185
Cdd:PRK06452 108 RQPDGRVAVRYFGGQTYP--------RTRFVGDKTGMALLHTLFERTSGLNVDFYNEWFSLDLVTD-NKKVVGIVAMQMK 178
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 186 DGSIHRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTGIFPAGCLMTEGCRGEGGILRN 265
Cdd:PRK06452 179 TLTPFFFKTKAVVLATGGMGMLYRHTTNSYINTGDGFGIALRAGAALKDPEFVQFHPTALYPSDVLISEAARGEGGILKN 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 266 SEGEPFMARYAPTAKDLASRDVVSRAMTLEIREGRGVgPNkDHIYLHLDHLPAETLRERLPGISETAKIFAGVDVTKEPI 345
Cdd:PRK06452 259 VKGERFMTKYAPKKLDLAPRDIVSRAIITEIREGRGF-PG-GYVGLDLTHLGEEYIKERLALAVEAAKSFAGVDAFTEPI 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 346 PVLPTVHYNMGGVPTNWKAQclnptesdpNKIVPGLLAAGEAGSASVHGANRLGANSLLDLVVFGRTAADTVAEIVKPNS 425
Cdd:PRK06452 337 PVRPAQHYYMGGIDVDIDGR---------NPDIVGLFSAGEAACVSVHGANRLGSNSLLDTLVFGQVTGRTVVQFLKSNP 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 426 --PPVTLPKDAGEATIDRFDKIRHAKGpVSTADLRSKLQRTMQTRAPVYRNGDDLKKGCEEVREIMKEYKDVGIKDRTLV 503
Cdd:PRK06452 408 gnPTSNYEKEAEKVVDDAYKFVKSESG-VHFGQILEKLRDTMWDYVGIYRDEGGLLNAMSEINKLRGMISNMYVTDKSKV 486
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 294955192 504 WNTDLIETLELENLITQAAQTIVSGEARKESRGAHAREDFTERDDKKWMKHSLSYQTKPHVE 565
Cdd:PRK06452 487 YNTEFFNALELRNMLDLALVIAKSALERKESRGAHYRTDYPDRDDNNWLKHTIAYLRGNTVE 548
|
|
| NadB |
COG0029 |
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the ... |
29-556 |
6.88e-146 |
|
Aspartate oxidase [Coenzyme transport and metabolism]; Aspartate oxidase is part of the Pathway/BioSystem: NAD biosynthesis
Pssm-ID: 439800 [Multi-domain] Cd Length: 521 Bit Score: 430.68 E-value: 6.88e-146
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 29 LKTACISKVFPTRSHTVAAQGGINAALGNmtEDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPFSRTK 108
Cdd:COG0029 27 GRVTLLTKGELGESNTRWAQGGIAAVLDP--GDSPELHIADTLAAGAGLCDPEAVRVLVEEGPERIRELIELGVPFDRDE 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 109 EGKIYQRAFGGQSlkfgkggqAYRCAAAADRTGHAILHTLYGMSLKYDCLFFIE-YFALDLIMDQDGSCKGVIAMSMEDG 187
Cdd:COG0029 105 DGELALTREGGHS--------RRRILHAGDATGREIERALLEAVRAHPNITVLEnHFAVDLITDADGRCVGAYVLDEKTG 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 188 SIHRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTGIFPAGC---LMTEGCRGEGGILR 264
Cdd:COG0029 177 EVETIRAKAVVLATGGAGQLYAYTTNPDVATGDGIAMAYRAGARLADMEFVQFHPTALYHPGApsfLISEAVRGEGAVLR 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 265 NSEGEPFMARYAPTAkDLASRDVVSRAMTLEIREGRGvgpnkDHIYLHLDHLPAETLRERLPGISETAKIFaGVDVTKEP 344
Cdd:COG0029 257 NADGERFMPDYHPRA-ELAPRDVVARAIDAEMKKTGG-----DCVYLDISHLDAEFIRERFPTIYARCLEL-GIDITKEP 329
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 345 IPVLPTVHYNMGGVPTNWKAQclnpTEsdpnkiVPGLLAAGEAGSASVHGANRLGANSLLDLVVFGRTAADTVAEIVKPN 424
Cdd:COG0029 330 IPVAPAAHYTMGGVATDLDGR----TS------IPGLYAVGEVACTGVHGANRLASNSLLEGLVFGRRAAEDIAARLAES 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 425 SPPVTLPkdageatiDRFDKIRHAKGPVSTADLRSKLQRTMQTRAPVYRNGDDLKKGCEEVREIMKEYKDVgikDRTLVW 504
Cdd:COG0029 400 PLPPEIP--------EWDESVTDPDEEVLIAHLRDELRRLMWDYVGIVRTAKGLERALRRLELLREEIEEY---ANFRVS 468
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 294955192 505 NtdliETLELENLITqAAQTIV-SGEARKESRGAHAREDFTERDDkKWMKHSL 556
Cdd:COG0029 469 R----DLLELRNLLL-VAELIVrAALARKESRGAHYRSDYPETDP-AWRRHTV 515
|
|
| PRK08626 |
PRK08626 |
fumarate reductase flavoprotein subunit; Provisional |
28-565 |
3.08e-139 |
|
fumarate reductase flavoprotein subunit; Provisional
Pssm-ID: 181507 [Multi-domain] Cd Length: 657 Bit Score: 418.61 E-value: 3.08e-139
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 28 GLKTACISKVFPTRSHTVAAQGGINAALGN--MTE-DDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPF 104
Cdd:PRK08626 28 GLDTIVLSLVPAKRSHSAAAQGGMQASLGNavKGEgDNEDVHFADTVKGSDWGCDQEVARMFVHTAPKAVRELAAWGVPW 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 105 SRTKEGK---------------------IYQRAFGGQslkfgkggQAYRCAAAADRTGHAILHTLYGMSLKYDCLFFIEY 163
Cdd:PRK08626 108 TRVTAGPrtvvingekvtitekeeahglINARDFGGT--------KKWRTCYTADGTGHTMLYAVDNEAIKLGVPVHDRK 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 164 FALDLIMDqDGSCKGVIAMSMEDGSIHRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGL-PLQDLEFVQFHP 242
Cdd:PRK08626 180 EAIALIHD-GKRCYGAVVRCLITGELRAYVAKATLIATGGYGRIYKVTTNAVICEGIGAAIALETGVaPLGNMEAVQFHP 258
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 243 TGIFPAGCLMTEGCRGEGGILRNSEGEPFMARYAPTAKDLASRDVVSRAMTLEIREGRGV-GPNKDHIYLHLDHLPAETL 321
Cdd:PRK08626 259 TAIVPSGILVTEGCRGDGGLLRDKDGYRFMPDYEPEKKELASRDVVSRRMTEHIRKGKGVkSPYGPHLWLDIRILGRKHI 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 322 RERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGVPTNWKAQclNPTesdpnkiVPGLLAAGEAGSASVHGANRLGAN 401
Cdd:PRK08626 339 ETNLREVQEICENFLGIDPAKDWIPVRPTQHYSMGGIRTNPTGE--SYG-------LKGLFSAGEAACWDMHGFNRLGGN 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 402 SLLDLVVFGRTAADTVAEIVKPNSPPV--TLPKDAGEATIDRFDKIRHAKGPVSTADLRSKLQRTMQTRAPVYRNGDDLK 479
Cdd:PRK08626 410 SLAETVVAGMIVGKYVADFCLGNELEIdtALVEKFVKKQQDRIDELIAGEGKENVFEIKNEMQEIMMEKVGIFRNGPELE 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 480 KGCEEVREIMKEYKDVGIKDRTLVWNTDLIETLELENLItQAAQTIVSG-EARKESRGAHAREDFTERDDKKWMKHSLSY 558
Cdd:PRK08626 490 KAVKELQELLERSKNIGLKSKKRGANPELEEALRVPRML-KLALCVAYGaLARTESRGAHAREDYPKRNDRDWLNRTLAS 568
|
570
....*....|..
gi 294955192 559 -----QTKPHVE 565
Cdd:PRK08626 569 wpegeALEPTLE 580
|
|
| sdhA |
PRK06263 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
25-566 |
5.32e-130 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 235758 [Multi-domain] Cd Length: 543 Bit Score: 390.88 E-value: 5.32e-130
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 25 VAHGLKTACISKVFPTRSH-TVAAQGGINAALGNmtEDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLP 103
Cdd:PRK06263 26 AERGKNVVIVSKGLFGKSGcTVMAEGGYNAVLNP--EDSFEKHFEDTMKGGAYLNDPKLVEILVKEAPKRLKDLEKFGAL 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 104 FSRTKEGKIYQRAFGGQSLKfgkggqayRCAAAADRTGHAILHTLYGMSLKYDCLFFIEYFALDLIMDQDGSCKGVIAMS 183
Cdd:PRK06263 104 FDRTEDGEIAQRPFGGQSFN--------RTCYAGDRTGHEMMMGLMEYLIKERIKILEEVMAIKLIVDENREVIGAIFLD 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 184 MEDGSIHRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTG-IFPA---GCLMTEGCRGE 259
Cdd:PRK06263 176 LRNGEIFPIYAKATILATGGAGQLYPITSNPIQKTGDGFAIAYRAGAELIDMEMVQFHPTGmVYPYsgrGILVTEAVRGE 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 260 GGILRNSEGEPFMARYAPTAKDLASRDVVSRAMTLEIREGRGVgpNKDHIYLHLDHLPAETLRERLPGISETAKIFaGVD 339
Cdd:PRK06263 256 GGILYNKNGERFMKRYDPERMELSTRDVVARAIYTEIQEGRGT--NHGGVYLDVTHLPDEVIEEKLETMLEQFLDV-GVD 332
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 340 VTKEPIPVLPTVHYNMGGVPTNWKAQclnpTEsdpnkiVPGLLAAGEAgSASVHGANRLGANSLLDLVVFGRTAADTVAE 419
Cdd:PRK06263 333 IRKEPMEVAPTAHHFMGGIRINEDCE----TN------IPGLFACGEV-AGGVHGANRLGGNALADTQVFGAIAGKSAAK 401
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 420 IVKPNSPpvTLPKDAGEATIDRF-DKIRHAKGPVSTADLRSKLQRTMQTRAPVYRNGDDLKKGCEEVREIMKEYKDVGIK 498
Cdd:PRK06263 402 NAENNEF--KKVNRSVEEDIARIkSEIKFLNGSINPYDLIDELKKTMWDYVSIVRNEKGLKKALEEINELKEKLKDLKVN 479
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 294955192 499 DRtlvwnTDLIETLELENLITQAAQTIVSGEARKESRGAHAREDFTERDDkKWMKHSLSYQTKPHVEE 566
Cdd:PRK06263 480 GI-----VDFNKALELENMILVAELVIKSALLRKESRGAHYREDYPETND-EWFGNIILNKNKIKFEK 541
|
|
| SdhA |
COG1053 |
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and ... |
17-422 |
7.27e-128 |
|
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit [Energy production and conversion]; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit is part of the Pathway/BioSystem: TCA cycle
Pssm-ID: 440673 [Multi-domain] Cd Length: 443 Bit Score: 381.87 E-value: 7.27e-128
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 17 GLRAASGLVAHGLKTACISKVFPTRSHTVAAQGGINAALGNMT----EDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQ 92
Cdd:COG1053 15 GLRAALEAAEAGLKVLVLEKVPPRGGHTAAAQGGINAAGTNVQkaagEDSPEEHFYDTVKGGDGLADQDLVEALAEEAPE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 93 VVLELESYGLPFSRTKEGKIYQraFGGQSLKfgkggqayRCAAAADRTGHAILHTLYGMSLKYDCLFFIEYFALDLIMDq 172
Cdd:COG1053 95 AIDWLEAQGVPFSRTPDGRLPQ--FGGHSVG--------RTCYAGDGTGHALLATLYQAALRLGVEIFTETEVLDLIVD- 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 173 DGSCKGVIAMsMEDGSIHRFGAHQTVIATGGYGRAYQS------------CTSAHTCTGDGGGMVSRAGLPLQDLEFVQF 240
Cdd:COG1053 164 DGRVVGVVAR-DRTGEIVRIRAKAVVLATGGFGRNYEMraeylpeaegalSTNAPGNTGDGIAMALRAGAALADMEFVQF 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 241 HPTGIFPAGCLMTEGCRG-EGGILRNSEGEPFMARYAPtakdlasRDVVSRAMTLEIREGrgvgpnkDHIYLHLDHLP-- 317
Cdd:COG1053 243 HPTGLPGDGGLISEGARGkPGGILVNKEGERFMNEYAP-------RDVVSRAILEEIDEP-------AYLVLDLRHRRrl 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 318 -----------AETLRErLP--------GISETAKIF-----AGVDVTKE-----------PIPVLPTVHYNMGGVPTNW 362
Cdd:COG1053 309 eeyleagylvkADTIEE-LAaklgidaaELAATVARYnaaakAGVDPRGTclgpikegpfyAIPVRPGVHYTMGGLRVDA 387
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 363 KAQCLNptesDPNKIVPGLLAAGEAgSASVHGANRLGANSLLDLVVFGRTAADTVAEIVK 422
Cdd:COG1053 388 DARVLD----ADGTPIPGLYAAGEA-AGSVHGANRLGGNSLGDALVFGRIAGRHAAEYAK 442
|
|
| FAD_binding_2 |
pfam00890 |
FAD binding domain; This family includes members that bind FAD. This family includes the ... |
27-403 |
1.89e-119 |
|
FAD binding domain; This family includes members that bind FAD. This family includes the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase.
Pssm-ID: 395718 [Multi-domain] Cd Length: 398 Bit Score: 358.52 E-value: 1.89e-119
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 27 HGLKTACISKVFPTRSHTVAAQGGINAAL-GNMT-EDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPF 104
Cdd:pfam00890 21 AGLKVAVVEKGQPFGGATAWSSGGIDALGnPPQGgIDSPELHPTDTLKGLDELADHPYVEAFVEAAPEAVDWLEALGVPF 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 105 SRTKEGKIYQRAFGGQSLKfgkggqAYRCAAAADR-----TGHAILHTLYGMSLKYDCLFFIEYFALDLIMDqDGSCKGV 179
Cdd:pfam00890 101 SRTEDGHLDLRPLGGLSAT------WRTPHDAADRrrglgTGHALLARLLEGLRKAGVDFQPRTAADDLIVE-DGRVTGA 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 180 IAMSMEDGSIHRFGA-HQTVIATGGYGR---------AYQSCTSAHTCTGDGGGMVSRAGLPLQD--LEFVQFHPTGIFP 247
Cdd:pfam00890 174 VVENRRNGREVRIRAiAAVLLATGGFGRlaelllpaaGYADTTNPPANTGDGLALALRAGAALTDdlMEFVQFHPTSLVG 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 248 ----AGCLMtEGCRGEGGILRNSEGEPFMaryaptaKDLASRDVVSRAMT-LEIREGRGvgpnkDHIYLHLDH-LPAETL 321
Cdd:pfam00890 254 irlgSGLLI-EALRGEGGILVNKDGRRFM-------NELASRDVVSRAITrNEIDEGRG-----ANVYLDASGsLDAEGL 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 322 RERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGVPTNWKAQclnpTESDPNKIVPGLLAAGEAGSASVHGANRLGAN 401
Cdd:pfam00890 321 EATLPAINEEAIFGLDVDPYDRPIPVFPAQHYTMGGVRTDENGR----VLDADGQPIPGLYAAGEVACGGVHGANRLGGN 396
|
..
gi 294955192 402 SL 403
Cdd:pfam00890 397 SL 398
|
|
| sdhA |
PRK07803 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
4-553 |
1.39e-111 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236101 [Multi-domain] Cd Length: 626 Bit Score: 346.25 E-value: 1.39e-111
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 4 HFYDAVVVGAGGAGLRAASGLVAHGLKTACISKVFPTRSHTVAAQGGINAALGNM-TEDDWRWHAYDTVKGSDWLGDQDA 82
Cdd:PRK07803 7 HSYDVVVIGAGGAGLRAAIEARERGLRVAVVCKSLFGKAHTVMAEGGCAAAMGNVnPKDNWQVHFRDTMRGGKFLNNWRM 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 83 IEHMCRLAPQVVLELESYGLPFSRTKEGKIYQRAFGGQSlkfgkggqaY-RCAAAADRTGHAILHTL------------- 148
Cdd:PRK07803 87 AELHAKEAPDRVWELETYGALFDRTKDGRISQRNFGGHT---------YpRLAHVGDRTGLELIRTLqqkivslqqedha 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 149 ----YGMSLKydclFFIEYFALDLIMDqDGSCKGVIAMSMEDGSIHRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGM 224
Cdd:PRK07803 158 elgdYEARIK----VFAECTITELLKD-GGRIAGAFGYWRESGRFVLFEAPAVVLATGGIGKSFKVTSNSWEYTGDGHAL 232
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 225 VSRAGLPLQDLEFVQFHPTG-IFPA---GCLMTEGCRGEGGILRNSEGEPFMARYAP------TA--------------- 279
Cdd:PRK07803 233 ALRAGATLINMEFVQFHPTGmVWPPsvkGILVTEGVRGDGGVLKNSEGKRFMFDYIPdvfkgqYAeteeeadrwykdndn 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 280 ----KDLASRDVVSRAMTLEIREGRGvgpnKDHIYLHLD---HLPAETLRERLPGISETAKIFAGVDVTKEPIPVLPTVH 352
Cdd:PRK07803 313 nrrpPELLPRDEVARAINSEVKAGRG----SPHGGVYLDiasRLPAEEIKRRLPSMYHQFKELADVDITKEPMEVGPTCH 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 353 YNMGGVptnwkaqclnptESDPN---KIVPGLLAAGEAgSASVHGANRLGANSLLDLVVFGRTAADTVAEIVKPNSPPVT 429
Cdd:PRK07803 389 YVMGGV------------EVDPDtgaATVPGLFAAGEC-AGGMHGSNRLGGNSLSDLLVFGRRAGLGAADYVRGLGSRPA 455
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 430 LPKDAGEATIDR----FDKIRHAKGPVStadLRSKLQRTMQTRAPVYRNGDDLKKGCEEVREIMKEYKDVGIKDRTLV-- 503
Cdd:PRK07803 456 VSEEAVDAAAREalapFERPAGAENPYT---LHAELQQTMNDLVGIIRKEDEIEQALEKLAELKERAANVSVEGHRQYnp 532
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 294955192 504 -WNTdlieTLELENLITQAAQTIVSGEARKESRGAHAREDFTERdDKKWMK 553
Cdd:PRK07803 533 gWHL----ALDLRNMLLVSECVARAALERTESRGGHTRDDHPGM-DPEWRR 578
|
|
| sdhA |
PRK08641 |
succinate dehydrogenase flavoprotein subunit; Reviewed |
41-570 |
2.03e-102 |
|
succinate dehydrogenase flavoprotein subunit; Reviewed
Pssm-ID: 236319 [Multi-domain] Cd Length: 589 Bit Score: 321.15 E-value: 2.03e-102
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 41 RSHTVAAQGGINAALGNMTEDDWRW-HAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPFSRTKEGKIYQRAFGG 119
Cdd:PRK08641 39 RSHSVCAQGGINGAVNTKGEGDSPWiHFDDTVYGGDFLANQPPVKAMCEAAPGIIHLLDRMGVMFNRTPEGLLDFRRFGG 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 120 QslkfgkggQAYRCAAAADRTGHAILHTLYGMSLKYDCLFFIEYFA----LDLIMDQDGSCKGVIAMSMEDGSIHRFGAH 195
Cdd:PRK08641 119 T--------LHHRTAFAGATTGQQLLYALDEQVRRYEVAGLVTKYEgwefLGAVLDDEGVCRGIVAQDLFTMEIESFPAD 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 196 QTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTGIfPAG---CLMTEGCRGEGG-ILRNSEGEP- 270
Cdd:PRK08641 191 AVIMATGGPGIIFGKSTNSTINTGSAASRVYQQGAYYANGEFIQIHPTAI-PGDdklRLMSESARGEGGrVWTYKDGKPw 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 271 -FMARYAPTAKDLASRDVVSRAM-TLEIREGRGVGpNKDHIYLHLDHLPAETLRERLPGISETAKIFAGVDVTKEPIPVL 348
Cdd:PRK08641 270 yFLEEKYPAYGNLVPRDIATREIfDVCVEQKLGIN-GENMVYLDLSHKDPKELDIKLGGILEIYEKFTGDDPRKVPMKIF 348
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 349 PTVHYNMGGVPTNWKaQCLNptesdpnkiVPGLLAAGEAgSASVHGANRLGANSLLDLVVFGRTAADTVAEIVK-----P 423
Cdd:PRK08641 349 PAVHYSMGGLWVDYD-QMTN---------IPGLFAAGEC-DYSYHGANRLGANSLLSAIYGGMVAGPNAVEYIKglgksA 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 424 NSPPVTLPKDAGEATIDRFDKIRHAKGPVSTADLRSKLQRTMQTRAPVYRNGDDLKKGCEEVREIMKEYKDVGIKDRTLV 503
Cdd:PRK08641 418 DDVSSSVFEQALKQEQEKFDNILSMDGTENAYVLHKELGEWMTDNVTVVRENDKLLETDEKIQELMERYKRISVNDTSRW 497
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 294955192 504 WNTDLIETLELENLItQAAQTIVSGE-ARKESRGAHAREDFTERDDKKWMKHSLSYQTKPHVEESVSY 570
Cdd:PRK08641 498 SNQGASFTRQLWNML-ELARVITIGAlNRNESRGAHYKPEFPERNDENWLKTTMATYTPEGEEPEFSY 564
|
|
| sdhA_Bsu |
TIGR01811 |
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis ... |
39-553 |
1.64e-97 |
|
succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup; This model represents the succinate dehydrogenase flavoprotein subunit as found in the low-GC Gram-positive bacteria and a few other lineages. This enzyme may act in a complete or partial TCA cycle, or act in the opposite direction as fumarate reductase. In some but not all species, succinate dehydrogenase and fumarate reductase may be encoded as separate isozymes. [Energy metabolism, TCA cycle]
Pssm-ID: 130870 [Multi-domain] Cd Length: 603 Bit Score: 308.70 E-value: 1.64e-97
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 39 PTRSHTVAAQGGINAALGNMTEDDWRW-HAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPFSRTKEGKIYQRAF 117
Cdd:TIGR01811 33 PRRAHSIAAQGGINGAVNTKGDGDSPWrHFDDTVKGGDFRARESPVKRLAVASPEIIDLMDAMGVPFAREYGGLLDTRSF 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 118 GGQslkfgkggQAYRCAAAADRTGHAILHTLYGMSLKYDCLFFIEYFA----LDLIMDQDGSCKGVIAMSMEDGSIHRFG 193
Cdd:TIGR01811 113 GGV--------QVSRTAYARGQTGQQLLLALDSALRRQIAAGLVEKYEgwemLDIIVVDGNRARGIIARNLVTGEIETHS 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 194 AHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTGIFPAGC------LMTEGCRGEGGI----- 262
Cdd:TIGR01811 185 ADAVILATGGYGNVFGKSTNAMNSNASAAWRAYEQGAYFANPEFIQIHPTAIPVDGTwqsklrLMSESLRNDGRIwtpke 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 263 -------LRNSEGEP--FMARYAPTAKDLASRDVVSRAMTLEIREGRGVGPNKDHIYLHLDH----LPAETLRERLPGIS 329
Cdd:TIGR01811 265 kndnrdpNTIPEDKRdyFLERRYPAFGNLVPRDIASRAIFQVCDAGKGVGPGENAVYLDFSDaderLGRKEIDAKYGNLF 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 330 ETAKIFAGVDVTKEPIPVLPTVHYNMGGVptnWkaqclnpTESDPNKIVPGLLAAGEAgSASVHGANRLGANSLLDLVVF 409
Cdd:TIGR01811 345 EMYEKFTGDDPYKVPMRIFPAVHYTMGGL---W-------VDYDQMTNIPGLFAAGEC-DFSQHGANRLGANSLLSAIAD 413
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 410 GRTAA-DTVAEIVKPNSPPVTLPKDAGEA------TIDRFDKIRHAKGPVSTADLRSKLQRTMQTRAPVYRNGDDLKKGC 482
Cdd:TIGR01811 414 GYFALpFTIPNYLGPELSSEDMPEDAPEFqaalaeEQERFDRLLKMRGDENPYYLHRELGEIMTENCGVSRNNEKLLKTD 493
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 294955192 483 EEVREIMKEY-KDVGIKDRTLVWNTDLIETLELENLITQAAQTIVSGEARKESRGAHAREDF------TERDDKKWMK 553
Cdd:TIGR01811 494 EKIRELRERFwKNIDIPGTTKESNQVLEFARRVADYLELAELMCLDALNRNESCGAHFRPEFptpdgeAERNDEEFLK 571
|
|
| PLN02815 |
PLN02815 |
L-aspartate oxidase |
27-550 |
3.11e-96 |
|
L-aspartate oxidase
Pssm-ID: 215436 [Multi-domain] Cd Length: 594 Bit Score: 305.10 E-value: 3.11e-96
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 27 HGlKTACISKVFPTRSHTVAAQGGINAALGnmTEDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPFSR 106
Cdd:PLN02815 51 YG-TVAIITKDEPHESNTNYAQGGVSAVLD--PSDSVESHMRDTIVAGAFLCDEETVRVVCTEGPERVKELIAMGASFDH 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 107 TKEGKIYQRAFGGQSlkfgkggqAYRCAAAADRTGHAILHTLYGMSLKYDCLFFIEY-FALDLIMDQDGS---CKGVIAM 182
Cdd:PLN02815 128 GEDGNLHLAREGGHS--------HHRIVHAADMTGREIERALLEAVKNDPNITFFEHhFAIDLLTSQDGGsivCHGADVL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 183 SMEDGSIHRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTGIFPAGC------------ 250
Cdd:PLN02815 200 DTRTGEVVRFISKVTLLASGGAGHIYPSTTNPLVATGDGIAMAHRAQAVVSNMEFVQFHPTALADEGLpikpakarenaf 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 251 LMTEGCRGEGGILRNSEGEPFMARYAPTAkDLASRDVVSRAMTLEIREGrgvgpNKDHIYLHLDHLPAETLRERLPGI-S 329
Cdd:PLN02815 280 LITEAVRGDGGILYNLAGERFMPLYDERA-ELAPRDVVARSIDDQLKKR-----NEKYVLLDISHKPREEILSHFPNIaA 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 330 ETAKIfaGVDVTKEPIPVLPTVHYNMGGVPTNwkaqcLNPTESdpnkiVPGLLAAGEAGSASVHGANRLGANSLLDLVVF 409
Cdd:PLN02815 354 ECLKR--GLDITKQPIPVVPAAHYMCGGVRTG-----LQGETN-----VQGLYAAGEVACTGLHGANRLASNSLLEALVF 421
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 410 GRTAADTVAEIVKPNSPPVTLPKDAGEATIdRFDKIRHAKGPVS--TADLRSKLQRTMQTRAPVYRNGDDLKKGCEEVRE 487
Cdd:PLN02815 422 ARRAVQPSIDHMARALRDVSAAAAWARPVA-PTALADSVMDEILewTAVVRKELQRIMWNYVGIVRSTERLETAERKLEE 500
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 294955192 488 IMKEYKDVgIKDRTLVWNTDLIETLELENLITQAAQTIVSGEARKESRGAHAREDFTERDDKK 550
Cdd:PLN02815 501 LEAEWEAI-LFRHGWKPTMVGLEACEMRNLFCVAKLVVSSALARKESRGLHYTTDYPELVESE 562
|
|
| nadB |
TIGR00551 |
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase ... |
34-543 |
4.60e-87 |
|
L-aspartate oxidase; L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA. [Biosynthesis of cofactors, prosthetic groups, and carriers, Pyridine nucleotides]
Pssm-ID: 273131 [Multi-domain] Cd Length: 489 Bit Score: 278.22 E-value: 4.60e-87
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 34 ISKVFPTRSHTVAAQGGINAALGNmtEDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPFSRTKEGKIY 113
Cdd:TIGR00551 30 ITKASVTDSNSYYAQGGIAAALAE--TDSIDAHVEDTLAAGAGICDEEAVWFVVSDGSEAVQFLVSHGVTFDRNEQGGVA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 114 QRAFGGQSLKfgkggqayRCAAAADRTGHAILHTLYGMSLKYDCLFFIE-YFALDLIMDqDGSCKGViaMSMEDGSIHRF 192
Cdd:TIGR00551 108 LTREGGHSYP--------RIFHAGDATGREIIPTLEKHARSEPNVNIIEgEFALDLLIE-TGRCAGV--FVQGSGTLETL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 193 GAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTGIFPAGC---LMTEGCRGEGGILRNSEGE 269
Cdd:TIGR00551 177 HADAVVLATGGFGGLYRFTTNPKNSTGDGIALAWRAGVPVRDLEFVQFHPTALIKPRVryfLITEAVRGEGAKLVDRDGE 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 270 PFMARYAPTAkDLASRDVVSRAMTLEIREGrgvgpNKDHIYLHLDHLPAetLRERLPGISETAKiFAGVDVTKEPIPVLP 349
Cdd:TIGR00551 257 RFMADRHPRG-ELAPRDIVARAIDMEMAEG-----GGDCVFLDASGIEN--FKDRFPTIYAVCR-GAGIDPEREPIPVAP 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 350 TVHYNMGGVPTNWKAQclnpTEsdpnkiVPGLLAAGEAGSASVHGANRLGANSLLDLVVFGRTAADTVAEivkpnsPPvt 429
Cdd:TIGR00551 328 GAHYTMGGISVDAFGR----TT------IPGLYAIGETACTGLHGANRLASNSLLECLVFGLRAARTISR------EP-- 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 430 lPKDAGEATIDRFDKIRhakgpVSTADLRSKLQRTMQTRAPVYRNGDDLKKGCEEVREIMKeyKDVGIKDrtlvwntDLI 509
Cdd:TIGR00551 390 -PYASREYQSGVWDEPR-----SENPLDRHELQHKMSSLRSVLWNHAGIVRLEWSLREALR--KLVEIQD-------EVD 454
|
490 500 510
....*....|....*....|....*....|....*
gi 294955192 510 ETLELENLiTQAAQTIV-SGEARKESRGAHAREDF 543
Cdd:TIGR00551 455 ERMELSNL-KLVAKLVTiSALKREESRGAHYRLDY 488
|
|
| PRK07512 |
PRK07512 |
L-aspartate oxidase; Provisional |
47-547 |
4.86e-84 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236036 [Multi-domain] Cd Length: 513 Bit Score: 271.01 E-value: 4.86e-84
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 47 AQGGINAALGnmTEDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPFSRTKEGKIyqrafggqSLKFGK 126
Cdd:PRK07512 50 AQGGIAAALG--PDDSPALHAADTLAAGAGLCDPAVAALITAEAPAAIEDLLRLGVPFDRDADGRL--------ALGLEA 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 127 GGQAYRCA-AAADRTGHAILHTLYGMSLKYDCLFFIE-YFALDLIMDqDGSCKGVIAMSmeDGSIHRFGAHQTVIATGGY 204
Cdd:PRK07512 120 AHSRRRIVhVGGDGAGAAIMRALIAAVRATPSITVLEgAEARRLLVD-DGAVAGVLAAT--AGGPVVLPARAVVLATGGI 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 205 GRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTGI----FPAGcLMTEGCRGEGGILRNSEGEPFMARYAPTAk 280
Cdd:PRK07512 197 GGLYAVTTNPAGAFGQGLALAARAGAVIADPEFVQFHPTAIdigrDPAP-LATEALRGEGAILINEDGERFMADIHPGA- 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 281 DLASRDVVSRAMTLEIREGRGVgpnkdhiYLHLDHLPAETLRERLPGISEtAKIFAGVDVTKEPIPVLPTVHYNMGGVPT 360
Cdd:PRK07512 275 ELAPRDVVARAVFAEIAAGRGA-------FLDARAALGAHFATRFPTVYA-ACRSAGIDPARQPIPVAPAAHYHMGGIAV 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 361 NwkaqcLNPTESdpnkiVPGLLAAGEAGSASVHGANRLGANSLLDLVVFGRTAADTVAEIVKPNSPPVTLPkdageatid 440
Cdd:PRK07512 347 D-----ADGRSS-----LPGLWAAGEVASTGLHGANRLASNSLLEAVVFAARAAEDIAGTPAAAAAPLSAA--------- 407
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 441 rfdkirhAKGPVSTADLrSKLQRTMQTRAPVYRNGDDLKKGCEEVREImkEYKDVGIKDRTLVwntdlietlelENLITQ 520
Cdd:PRK07512 408 -------AAPALDPADL-ALLRPIMSRHVGVLRDADGLRRAIAALLPL--EAGAGPAADPATV-----------ALLIAV 466
|
490 500
....*....|....*....|....*..
gi 294955192 521 AAQtivsgeARKESRGAHAREDFTERD 547
Cdd:PRK07512 467 AAL------AREESRGAHFRTDFPLTA 487
|
|
| PRK08071 |
PRK08071 |
L-aspartate oxidase; Provisional |
34-546 |
5.16e-82 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236147 [Multi-domain] Cd Length: 510 Bit Score: 265.70 E-value: 5.16e-82
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 34 ISKVFPTRSHTVAAQGGINAALGnmTEDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPFSRTKEGKiy 113
Cdd:PRK08071 31 ITKKTKRNSNSHLAQGGIAAAVA--TYDSPNDHFEDTLVAGCHHNNERAVRYLVEEGPKEIQELIENGMPFDGDETGP-- 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 114 qrafggqsLKFGK-GGQAYR--CAAAADRTGHAILHTLYGMSLKYdcLFFIEY-FALDLIMdQDGSCKGVIAMSmEDGSI 189
Cdd:PRK08071 107 --------LHLGKeGAHRKRriLHAGGDATGKNLLEHLLQELVPH--VTVVEQeMVIDLII-ENGRCIGVLTKD-SEGKL 174
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 190 HRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTGIFPAG-C--LMTEGCRGEGGILRNS 266
Cdd:PRK08071 175 KRYYADYVVLASGGCGGLYAFTSNDKTITGDGLAMAYRAGAELVDLEFIQFHPTMLYANGrCvgLVSEAVRGEGAVLINE 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 267 EGEPFMARYAPTaKDLASRDVVSRAMTLEIREGRGVgpnkdhiYLHLDHLPaeTLRERLPGISETAKIfAGVDVTKEPIP 346
Cdd:PRK08071 255 DGRRFMMGIHPL-ADLAPRDVVARAIHEELLSGEKV-------YLNISSIQ--NFEERFPTISALCEK-NGVDIETKRIP 323
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 347 VLPTVHYNMGGVPTNwkaqCLNPTEsdpnkiVPGLLAAGEAGSASVHGANRLGANSLLDLVVFGRTAADtvaEIVKPNSP 426
Cdd:PRK08071 324 VVPGAHFLMGGVKTN----LDGETS------IPGLYAIGEVACTGVHGANRLASNSLLEGLVFGKRAAE---HILTKATK 390
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 427 PVTLPKDAGEatidrfdKIRHAKGPVSTadlRSKLQRTMQTRAPVYRNGDDLKkgceevrEIMKEYKDVGIKDRTLVWNT 506
Cdd:PRK08071 391 PRLNPFAEKE-------KKFIVLNHLPT---KEEIQEKMMKYVGIVRTEQSLS-------EAKRWLEKYGVRNMILDHDA 453
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 294955192 507 DLIETLELENLITQAAQTIVSGEARKESRGAHAREDFTER 546
Cdd:PRK08071 454 LTNEEIELSHMLTVAKLIVVSALQRTESRGGHYRSDYPHR 493
|
|
| PRK07804 |
PRK07804 |
L-aspartate oxidase; Provisional |
28-554 |
6.25e-79 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236102 [Multi-domain] Cd Length: 541 Bit Score: 258.36 E-value: 6.25e-79
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 28 GLKTACISKVFPTRSHTVAAQGGINAALGNmtEDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPFSRT 107
Cdd:PRK07804 39 GRRVLVVTKAALDDGSTRWAQGGIAAVLDP--GDSPEAHVADTLVAGAGLCDPDAVRSLVAEGPRAVRELVALGARFDES 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 108 KEGKIYQRAFGGQSlkfgkggqAYRCA-AAADRTGHAILHTLyGMSLKYDCLFFIEY-FALDLIMDQDGSCKGVIAMSME 185
Cdd:PRK07804 117 PDGRWALTREGGHS--------RRRIVhAGGDATGAEVQRAL-DAAVRADPLDIREHaLALDLLTDGTGAVAGVTLHVLG 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 186 DGSIHRFGAHQT---VIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTGIFPAGC------LMTEGC 256
Cdd:PRK07804 188 EGSPDGVGAVHApavVLATGGLGQLYAATTNPAGSTGDGVALALRAGAAVSDLEFVQFHPTVLFLGPAaggqrpLISEAV 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 257 RGEGGILRNSEGEPFMARYAPTAkDLASRDVVSRAMTLEIREgRGVgpnkDHIYLhlDHLPAETLRERLPGISETAKIfA 336
Cdd:PRK07804 268 RGEGAILVDAQGNRFMAGVHPLA-DLAPRDVVAKAIDRRMKA-TGD----DHVYL--DARGIEGFARRFPTITASCRA-A 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 337 GVDVTKEPIPVLPTVHYNMGGVPTNwkaqclnpteSDPNKIVPGLLAAGEAGSASVHGANRLGANSLLDLVVFGRTAADT 416
Cdd:PRK07804 339 GIDPVRQPIPVAPAAHYSCGGVVTD----------VYGRTSVPGLYAAGEVACTGVHGANRLASNSLLEGLVVGERAGAA 408
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 417 VAEIVKPNSPPVTLPKDAGEatidrfdkirhakGPVSTADLRSKLQRTMQTRAPVYRNGDDLKKGCEEVReimkeykdvG 496
Cdd:PRK07804 409 AAAHAAAAGRPRATPAVGPE-------------PGLLPALDRAELQRAMTRGAGVLRSAAGLARAADRLA---------A 466
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 294955192 497 IKDRTLVWNTDlieTLELENLITQAAQTIVSGEARKESRGAHAREDFTERDDkKWMKH 554
Cdd:PRK07804 467 GAPARVVPGRA---DWEDTNLTLVARALVAAALARTESRGCHWREDFPDTDD-EWARS 520
|
|
| PRK07395 |
PRK07395 |
L-aspartate oxidase; Provisional |
6-556 |
3.40e-76 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236010 [Multi-domain] Cd Length: 553 Bit Score: 251.50 E-value: 3.40e-76
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 6 YDAVVVGAGGAGLRAASGLVAHgLKTACISKVFPTRSHTVAAQGGINAALGnmTEDDWRWHAYDTVKGSDWLGDQDAIEH 85
Cdd:PRK07395 10 FDVLVVGSGAAGLYAALCLPSH-LRVGLITKDTLKTSASDWAQGGIAAAIA--PDDSPKLHYEDTLKAGAGLCDPEAVRF 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 86 MCRLAPQVVLELESYGLPFSRTkegkiyqrafgGQSLKFG--KGGQAYRCAAAADRTGHAILHTLYGMSLKYDCLFFI-E 162
Cdd:PRK07395 87 LVEQAPEAIASLVEMGVAFDRH-----------GQHLALTleAAHSRPRVLHAADTTGRAIVTTLTEQVLQRPNIEIIsQ 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 163 YFALDLIMD-QDGSCKGVIAMSmeDGSIHRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFH 241
Cdd:PRK07395 156 ALALSLWLEpETGRCQGISLLY--QGQITWLRAGAVILATGGGGQVFAQTTNPAVSTGDGVALAWRAGAQLRDLEFFQFH 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 242 PTGIFPAGC---LMTEGCRGEGGILRNSEGEPFMARYAPtAKDLASRDVVSRAMTLEIREgRGVGPNKDHIYLHLDHLPA 318
Cdd:PRK07395 234 PTALTKPGAprfLISEAVRGEGAHLVDAQGRRFAFDYHP-AGELAPRDVVSRAIFSHLQK-TATDPATAHVWLDLRPIPA 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 319 ETLRERLPGISETAKIFaGVDVTKEPIPVLPTVHYNMGGVPTNWKAQclnpTEsdpnkiVPGLLAAGEAGSASVHGANRL 398
Cdd:PRK07395 312 ERIRRRFPNIIRVCQKW-GIDVFQEPIPVAPAAHYWMGGVVTDLNNQ----TS------IPGLYAVGETASTGVHGANRL 380
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 399 GANSLLDLVVFGRTAADTVAEIVKPNSPPVT---LPKDAGEATIDrFDKIRHakgpvstadLRSKLQRTMQTRAPVYRNG 475
Cdd:PRK07395 381 ASNSLLECLVFAAQLAQLELPIEPPASPDLPpisFIIDASQWKNE-QEQIQR---------IRQELPELVWQSAGICREA 450
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 476 DDLKKGCEEVREIMKEYKDVGIK--------DRTLVWNTDLIET-----LELENLITQAAQTIVSGEARKESRGAHARED 542
Cdd:PRK07395 451 DTLERAIAQVEQWQQQLAALPLSqflanlppGQTVSFNGPDAEQqlrlwAETRNLLDIAYLILKSALFRTESRGGHYRLD 530
|
570
....*....|....
gi 294955192 543 FTErDDKKWMKHSL 556
Cdd:PRK07395 531 YPQ-TDPAWQVHTL 543
|
|
| PRK09077 |
PRK09077 |
L-aspartate oxidase; Provisional |
25-549 |
1.05e-75 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236374 [Multi-domain] Cd Length: 536 Bit Score: 249.83 E-value: 1.05e-75
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 25 VAHGLKTACISKVFPTRSHTVAAQGGINAALGnmTEDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPF 104
Cdd:PRK09077 27 LAEHRRVAVLSKGPLSEGSTFYAQGGIAAVLD--ETDSIESHVEDTLIAGAGLCDEDAVRFIAENAREAVQWLIDQGVPF 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 105 SRTKEGKIYQRAF----GGQSLKfgkggqayRCAAAADRTGHAILHTLYGMSLKYDCLFFIE-YFALDLI----MDQDGS 175
Cdd:PRK09077 105 TTDEQANGEEGYHltreGGHSHR--------RILHAADATGKAVQTTLVERARNHPNITVLErHNAIDLItsdkLGLPGR 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 176 -CKGVIAMSMEDGSIHRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTGIFPAGC---L 251
Cdd:PRK09077 177 rVVGAYVLNRNKERVETIRAKFVVLATGGASKVYLYTTNPDIASGDGIAMAWRAGCRVANMEFNQFHPTCLYHPQArsfL 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 252 MTEGCRGEGGILRNSEGEPFMARYAPTAkDLASRDVVSRAMTLEIREgRGVgpnkDHIYLHLDHLPAETLRERLPGISET 331
Cdd:PRK09077 257 ITEALRGEGAYLKLPDGTRFMPDFDERA-ELAPRDIVARAIDHEMKR-LGA----DCVYLDISHKPADFIRQHFPTIYER 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 332 AKIFaGVDVTKEPIPVLPTVHYNMGGVPTNWKAQclnpteSDpnkiVPGLLAAGEAGSASVHGANRLGANSLLDLVVFGR 411
Cdd:PRK09077 331 CLEL-GIDITKEPIPVVPAAHYTCGGVMVDLHGR------TD----LDGLYAIGEVSYTGLHGANRMASNSLLECLVYGR 399
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 412 TAADTVAEIVKPNSPPVTLP-------KDAGEATI--DRFDKIRHAK----GPVSTadlRSKLQRTmQTRAPVYRngddl 478
Cdd:PRK09077 400 SAAEDILSRLPKAPMPPTLPawdesrvTDSDEEVViqHNWHELRLFMwdyvGIVRT---TKRLERA-LHRIRLLQ----- 470
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 294955192 479 kkgcEEVREIMKEYKdvgikdrtlVWNtDLietLELENLItQAAQTIV-SGEARKESRGAHAREDFTERDDK 549
Cdd:PRK09077 471 ----QEIDEYYANFR---------VSN-NL---LELRNLV-QVAELIVrCAMERKESRGLHYTLDYPELLPE 524
|
|
| sdhA |
PRK07573 |
fumarate reductase/succinate dehydrogenase flavoprotein subunit; |
36-552 |
2.93e-60 |
|
fumarate reductase/succinate dehydrogenase flavoprotein subunit;
Pssm-ID: 236054 [Multi-domain] Cd Length: 640 Bit Score: 210.83 E-value: 2.93e-60
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 36 KVF-----PTRSHTVAAQGGINAALGNMTEDD--WRwHAYDTVKGsdwlGDQDAIEHMC-RLA---PQVVLELESYGLPF 104
Cdd:PRK07573 62 KVFcyqdsPRRAHSIAAQGGINAAKNYQNDGDsvYR-LFYDTVKG----GDFRAREANVyRLAevsVNIIDQCVAQGVPF 136
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 105 SRTKEGKIYQRAFGG-Q-SLKF---GKGGQA--YRCAAAADR---TGHAILHTLYGMslkydclffieyfaLDLIMDqDG 174
Cdd:PRK07573 137 AREYGGLLANRSFGGaQvSRTFyarGQTGQQllLGAYQALSRqiaAGTVKMYTRTEM--------------LDLVVV-DG 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 175 SCKGVIAMSMEDGSIHRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTGIFPAG----- 249
Cdd:PRK07573 202 RARGIVARNLVTGEIERHTADAVVLATGGYGNVFYLSTNAMGSNATAIWRAHKKGAYFANPCFTQIHPTCIPVSGdyqsk 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 250 -CLMTEGCRGEGGI--------LRNSEGEP------FMARYAPTAKDLASRDVVSRAMTLEIREGRGVGPNKDHIYLHL- 313
Cdd:PRK07573 282 lTLMSESLRNDGRIwvpkkkgdKRKPNDIPeeerdyYLERRYPAFGNLVPRDVASRAAKERCDAGRGVGPTGLGVYLDFa 361
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 314 ---DHLPAETLRERLPGISETAKIFAGVDVTKEPIPVLPTVHYNMGGVptnWKAQCLNPTesdpnkiVPGLLAAGEAgSA 390
Cdd:PRK07573 362 daiKRLGKDVIRERYGNLFDMYERITGENPYETPMRIYPAVHYTMGGL---WVDYNLMST-------IPGLFVIGEA-NF 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 391 SVHGANRLGANSLLD-LV----VFGRTAADTVAEIVKPNSPPVTLP--KDAGEATIDRFDKIRHAKGPVSTADLRSKLQR 463
Cdd:PRK07573 431 SDHGANRLGASALMQgLAdgyfVLPYTIGNYLADTIGTPKVSTDHPefKEAEAEVQDRIDRLLNIKGKRTVDSFHRELGK 510
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 464 TMQTRAPVYRNGDDLKKGCEEVREIMKE-YKDVGIKDRTLVWNTDL------IETLELENLITQAAQtivsgeARKESRG 536
Cdd:PRK07573 511 IMWDYCGMARNEEGLKKALEKIRALREEfWKNVRVPGSADELNQELekagrvADFLELGELMCRDAL------HREESCG 584
|
570 580
....*....|....*....|..
gi 294955192 537 AHAREDF-TE-----RDDKKWM 552
Cdd:PRK07573 585 GHFREEHqTEdgealRDDENFA 606
|
|
| PRK06175 |
PRK06175 |
L-aspartate oxidase; Provisional |
29-446 |
2.43e-59 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 180442 [Multi-domain] Cd Length: 433 Bit Score: 203.38 E-value: 2.43e-59
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 29 LKTACISKVFPTRSHTVAAQGGINAALGnmtEDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPFSRTK 108
Cdd:PRK06175 27 LKILMVSKGKLNECNTYLAQGGISVARN---KDDITSFVEDTLKAGQYENNLEAVKILANESIENINKLIDMGLNFDKDE 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 109 EGKIYQRAfGGQSLKfgkggqayRCAAAADRTGHAILHTLYGMSLKYDCLFFIE--YFaLDLIMDqDGSCKGviAMSMED 186
Cdd:PRK06175 104 KELSYTKE-GAHSVN--------RIVHFKDNTGKKVEKILLKKVKKRKNITIIEncYL-VDIIEN-DNTCIG--AICLKD 170
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 187 GSIHRFGAHQTVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTGIFPAGC-----LMTEGCRGEGG 261
Cdd:PRK06175 171 NKQINIYSKVTILATGGIGGLFKNSTNQRIITGDGIAIAIRNNIKIKDLDYIQIHPTAFYEETIegkkfLISESVRGEGG 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 262 ILRNSEGEPFMaryaptaKDLASRDVVSRAMTLEIREgrgvgPNKDHIYLHLDHLPAETLRERLPGISETAKIfAGVDVT 341
Cdd:PRK06175 251 KLLNSKGERFV-------DELLPRDVVTKAILEEMKK-----TGSNYVYLDITFLDKDFLKNRFPTIYEECLK-RGIDIT 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 342 KEPIPVLPTVHYNMGGVPTNwkaqcLNPTESDPNkivpgLLAAGEAGSASVHGANRLGANSLLDLVVFGRTAADTVAEIV 421
Cdd:PRK06175 318 KDAIPVSPAQHYFMGGIKVD-----LNSKTSMKN-----LYAFGEVSCTGVHGANRLASNSLLEGLVFSKRGAEKINSEI 387
|
410 420 430
....*....|....*....|....*....|....*.
gi 294955192 422 ---KPNSPPVTLPKDAGEA--------TIDRFDKIR 446
Cdd:PRK06175 388 dniKLNITKVYTLKHDVEYysllnkkiIIKEIEKLR 423
|
|
| Succ_DH_flav_C |
pfam02910 |
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate ... |
458-570 |
6.36e-55 |
|
Fumarate reductase flavoprotein C-term; This family contains fumarate reductases, succinate dehydrogenases and L-aspartate oxidases.
Pssm-ID: 460743 [Multi-domain] Cd Length: 129 Bit Score: 181.49 E-value: 6.36e-55
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 458 RSKLQRTMQTRAPVYRNGDDLKKGCEEVREIMKEYKDVGIKDRTLVWNTDLIETLELENLITQAAQTIVSGEARKESRGA 537
Cdd:pfam02910 1 RRELQKTMQDNVGVFRTEEGLKEALEKIQELRERYKNVRVTDKSKVFNTELIEALELANLLELAEATARSALARKESRGA 80
|
90 100 110
....*....|....*....|....*....|...
gi 294955192 538 HAREDFTERDDKKWMKHSLSYQTKPHVEESVSY 570
Cdd:pfam02910 81 HAREDYPERDDENWLKHTLAYYDGDDGGPRLEY 113
|
|
| PRK08401 |
PRK08401 |
L-aspartate oxidase; Provisional |
39-543 |
3.97e-46 |
|
L-aspartate oxidase; Provisional
Pssm-ID: 236259 [Multi-domain] Cd Length: 466 Bit Score: 168.83 E-value: 3.97e-46
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 39 PTRSHTVAAQGGInaALGNMTEDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVVLELESYGLPF--SRTKEGKIYQRA 116
Cdd:PRK08401 34 IKKSNSYLAQAGI--AFPILEGDSIRAHVLDTIRAGKYINDEEVVWNVISKSSEAYDFLTSLGLEFegNELEGGHSFPRV 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 117 FggqSLKfgkggqayrcaaaaDRTGHAILHTLYgMSLKYDCLFFIEYFALDLIMdQDGSCKGVIAmsmeDGSIHRFGAhq 196
Cdd:PRK08401 112 F---TIK--------------NETGKHIIKILY-KHARELGVNFIRGFAEELAI-KNGKAYGVFL----DGELLKFDA-- 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 197 TVIATGGYGRAYQSCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTG-IFPAGC-LMTEGCRGEGGILRNSEGEPFMar 274
Cdd:PRK08401 167 TVIATGGFSGLFKFTAGSPLNLGTLIGDAVMKGAPARDLEFVQFHPTGfIGKRGTyLISEAVRGAGAKLVTGDGERFV-- 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 275 yaptaKDLASRDVVSRAMTLEIREGRGVgpnkdhiylHLDHLPAETLRERLPGISETAKIfAGVDVTKEPIPVLPTVHYN 354
Cdd:PRK08401 245 -----NELETRDIVARAIYRKMQEGKGV---------FLDATGIEDFKRRFPQIYAFLRK-EGIDPSRDLIPVTPIAHYT 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 355 MGG--VPTNWKAQclnptesdpnkiVPGLLAAGEAGSASVHGANRLGANSLLDLVVFGRTAADTVAEiVKPnsppvtlpk 432
Cdd:PRK08401 310 IGGisVDTFYRTG------------IKNLYAIGEAASNGFHGANRLASNSLLECIVSGLEVARTISR-ERP--------- 367
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 433 dageatidrfdKIRHAKGPVSTAdlrsklqrtmqtrapvYRNGDdlkkgCEEVREIMKEYKDVGIKDRTLVWNTDLIETL 512
Cdd:PRK08401 368 -----------KLREVKEPPYHG----------------YELGD-----VDSIREILWNHAGIVRSEESLREGLKKLEGI 415
|
490 500 510
....*....|....*....|....*....|..
gi 294955192 513 ELENLITQAAQTIV-SGEARKESRGAHAREDF 543
Cdd:PRK08401 416 EADPRLKLLAKGVLeCALAREESRGAHYREDF 447
|
|
| flavo_cyto_c |
TIGR01813 |
flavocytochrome c; This model describes a family of redox proteins related to the succinate ... |
47-415 |
8.15e-40 |
|
flavocytochrome c; This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton. [Energy metabolism, Electron transport]
Pssm-ID: 273816 [Multi-domain] Cd Length: 439 Bit Score: 150.57 E-value: 8.15e-40
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 47 AQGGINAALGNM-----TEDDWRWHAYDTVKGSDWLGDQDAIEHMCRLAPQVV-LELESYGLpfsrtKEGKIYQraFGGQ 120
Cdd:TIGR01813 42 AAGGMNAAGTDQqkalgIEDSPELFIKDTLKGGRGINDPELVRILAEESKDAVdWLQDGVGA-----RLDDLIQ--LGGH 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 121 SLKfgkggQAYRCAAAAdRTGHAILHTLYGMSLKYDCLFFIEYFALDLIMDQDGSCKGVIAMsMEDGSIHRFGAHQTVIA 200
Cdd:TIGR01813 115 SVP-----RAHRPTGGA-ASGAEIVQTLYKKAKKEGIDTRLNSKVEDLIQDDQGSVVGVVVK-GKGKGIYIKAAKAVVLA 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 201 TGGYGRAYQ------------SCTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPTG-IFPAGCLMTEGCRGEGGILRNSE 267
Cdd:TIGR01813 188 TGGFGSNKEmiakydptlkhlGSTNQPGATGDGLLMAEKIGAALVDMDYIQAHPTAsPDEGGFLISEAVRGYGAILVNKT 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 268 GEPFM-----------ARYAPTAKD---LASRDVVSRAMTLEIREGRGVGPNKDHI---YLHLDhLPAETLRERLPGISE 330
Cdd:TIGR01813 268 GERFMnelatrdkvsdAILAQPGKDaylIFDDDVYKKAKMVDNYYRLGVAYKGDSLeelAKQFG-IPAAALKQTIKDYNG 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 331 TA----------KIFAGVDVTKEP---IPVLPTVHYNMGGVPTNWKAQCLNPTesdpNKIVPGLLAAGEAgSASVHGANR 397
Cdd:TIGR01813 347 YVasgkdtpfgrPMDMPTDLSKAPyyaIKVTPGVHHTMGGVKINTKAEVLDAN----GKPIPGLFAAGEV-TGGVHGANR 421
|
410
....*....|....*...
gi 294955192 398 LGANSLLDLVVFGRTAAD 415
Cdd:TIGR01813 422 LGGNAIADCIVFGRIAGE 439
|
|
| PRK06481 |
PRK06481 |
flavocytochrome c; |
169-422 |
1.12e-28 |
|
flavocytochrome c;
Pssm-ID: 180584 [Multi-domain] Cd Length: 506 Bit Score: 119.55 E-value: 1.12e-28
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 169 IMDQDGSCKGViAMSMEDGSIHRFGAHQTVIATGGYGRAYQ------------SCTSAHTCTGDGGGMVSRAGLPLQDLE 236
Cdd:PRK06481 216 ITEKDGKVTGV-KVKINGKETKTISSKAVVVTTGGFGANKDmiakyrpdlkgyVTTNQEGSTGDGIKMIEKLGGTTVDMD 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 237 FVQFHPTGIFPAGCLMTEGCRGEGGILRNSEGEPFM-----------------ARYAPTAKDLASRDVVSrAMTLEIREG 299
Cdd:PRK06481 295 QIQIHPTVQQSKSYLIGEAVRGEGAILVNQKGKRFGneldtrdkvsaainklpEKYAYVVFDSGVKDRVK-AIAQYEEKG 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 300 RGV-GPNKDHIYLHLDhLPAETLRERLPGISETAKI--------FAGVD--VTKEP---IPVLPTVHYNMGGVPTNWKAQ 365
Cdd:PRK06481 374 FVEeGKTIDELAKKIN-VPAETLTKTLDTWNKAVKNkkdeafgrTTGMDndLSTGPyyaIKIAPGIHYTMGGVKINTNTE 452
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 294955192 366 CLNpTESDPnkiVPGLLAAGEAgSASVHGANRLGANSLLDLVVFGRTAADTVAEIVK 422
Cdd:PRK06481 453 VLK-KDGSP---ITGLYAAGEV-TGGLHGENRIGGNSVADIIIFGRQAGTQSAEFAK 504
|
|
| PTZ00306 |
PTZ00306 |
NADH-dependent fumarate reductase; Provisional |
179-422 |
4.48e-21 |
|
NADH-dependent fumarate reductase; Provisional
Pssm-ID: 140327 [Multi-domain] Cd Length: 1167 Bit Score: 97.93 E-value: 4.48e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 179 VIAMSMEDGSIHRFGAHQTVIATGGYG--RAYQS-------------CTSAHTCTGDGGGMVSRAGLPLQDLEFVQFHPT 243
Cdd:PTZ00306 594 YKQASDASGQVMDLLADAVILATGGFSndHTPNSllreyapqlsgfpTTNGPWATGDGVKLARKLGATLVDMDKVQLHPT 673
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 244 GIF-------PAGCLMTEGCRGEGGILRNSEGEPFMaryaptaKDLASRDVVSRAMTLEIREGRGVGP------------ 304
Cdd:PTZ00306 674 GLIdpkdpsnRTKYLGPEALRGSGGVLLNKNGERFV-------NELDLRSVVSQAIIAQGNEYPGSGGskfaycvlneaa 746
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 305 -------------NKDHIYLHLDHL---------PAETLRERLPGISETAK-----------IFAGVDVTKEPIPV---L 348
Cdd:PTZ00306 747 aklfgknslgfywKRLGLFQRVDDVkglakligcPVENLHRTLETYERLSTkkvacpltgkvVFPCVVGTQGPYYVafvT 826
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 349 PTVHYNMGGVPTNWKAQCL------NPTEsDPNKIVpGLLAAGEAgSASVHGANRLGANSLLDLVVFGRTAADTVAEIVK 422
Cdd:PTZ00306 827 PSIHYTMGGCLISPSAEMQmednsvNIFE-DRRPIL-GLFGAGEV-TGGVHGGNRLGGNSLLECVVFGKIAGDRAATILQ 903
|
|
| PRK06854 |
PRK06854 |
adenylyl-sulfate reductase subunit alpha; |
41-553 |
3.78e-12 |
|
adenylyl-sulfate reductase subunit alpha;
Pssm-ID: 235879 [Multi-domain] Cd Length: 608 Bit Score: 68.80 E-value: 3.78e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 41 RSHTVAaQG--GINAALG-NMTEDDWrwhaYDTVKGsDWLG--DQDAIEHMCRLAPQVVLELESYGLPFSRTKEGKiYQR 115
Cdd:PRK06854 49 RSGAVA-QGlsAINAYIGeGETPEDY----VRYVRK-DLMGivREDLVYDIARHVDSVVHLFEEWGLPIWKDENGK-YVR 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 116 AfGGQSLKFGkgGQAYRC--AAAADRTGHA-ILHTLygmslkydclffieyFALDLIMDqDGSCKGVIAMSMEDGSIHRF 192
Cdd:PRK06854 122 R-GRWQIMIN--GESYKPivAEAAKKALGDnVLNRV---------------FITDLLVD-DNRIAGAVGFSVRENKFYVF 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 193 GAHQTVIATGG----Y---------GRAYQSCTSahtcTGDGGGMVSRAGLPLQDLEfVQFHPT----GIFPAGCLMteg 255
Cdd:PRK06854 183 KAKAVIVATGGaagiYrprspgegrGRMWYPPFN----TGSGYAMGIRAGAEMTTFE-NRFIPLrfkdGYGPVGAWF--- 254
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 256 cRGEGGILRNSEGEPFMARYAPTAKDLASRDVVSR--------AMTLEIREGRGvgPnkdhIYLHLDH-LPAETLRERL- 325
Cdd:PRK06854 255 -LLFKAKAVNALGEEYEAKNAAELKKYVPYADYKPiptclrnyATVEENKAGRG--P----IYMDTEEaLQDKHLESELw 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 326 -------PGIsetAKIFAGVDV--TKEPIPVLPTVHYNMGGVPTNWKAQCLNPTESDPNKI---------VPGLLAAGEA 387
Cdd:PRK06854 328 edfldmtPGQ---ALLWAAQNIepEEENSEIMGTEPYIVGSHSGASGYWVSGPEDWVPEEYkwgynrmttVEGLFAAGDV 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 388 GSASVH----GA---NRLGANS----LLDLVVFGRTAADTVAEIVKPNsppVTLPKDAGEATIDRFDKIRHAKGPVSTAD 456
Cdd:PRK06854 405 VGGSPHkfssGSfaeGRIAAKAavryILDNKDEKPEIDDDQIEELKKE---IYAPLERYEEFKDYSTDPDVNPNYISPEQ 481
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 457 LRSKLQRTMQTRA----PVYR-NGDDLKKGCEEVREIMKEYKDVGIKDrtlvwNTDLIETLELENLITQAAQTIVSGEAR 531
Cdd:PRK06854 482 LEERLQKIMDEYAggisTNYTtNEKLLEIALELLEMLEEDSEKLAARD-----LHELMRCWELKHRLLVAEAHIRHLLFR 556
|
570 580
....*....|....*....|....
gi 294955192 532 KESR--GAHAREDFTERDDKKWMK 553
Cdd:PRK06854 557 KETRwpGYYERADYPGKDDENWKC 580
|
|
| PRK08275 |
PRK08275 |
putative oxidoreductase; Provisional |
74-556 |
2.01e-11 |
|
putative oxidoreductase; Provisional
Pssm-ID: 181346 [Multi-domain] Cd Length: 554 Bit Score: 66.61 E-value: 2.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 74 SDWLGDQDAIEHMCRLAPQVVLELESYGLPFSRTKEG-----KIYQraFGGQSLKFgkggqayrcaaaadRTGHAILHTL 148
Cdd:PRK08275 80 NDGIVDQKAVYAYAEHSFETIQQLDRWGVKFEKDETGdyavkKVHH--MGSYVLPM--------------PEGHDIKKVL 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 149 YGMSLKYDCLFFIEYFALDLIMDQDGSCKGVIAMSMEDGSIHRFGAHQTVIATGGYGR-----------AYQSCTSAhtc 217
Cdd:PRK08275 144 YRQLKRARVLITNRIMATRLLTDADGRVAGALGFDCRTGEFLVIRAKAVILCCGAAGRlglpasgylfgTYENPTNA--- 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 218 tGDGGGMVSRAGLPLQDLEFVQFHP-------------TGIFpagclmtegcrgeGGILRNSEGEPFMARYAPtakdlas 284
Cdd:PRK08275 221 -GDGYAMAYHAGAELANLECFQINPlikdyngpacayvTGPL-------------GGYTANAKGERFIECDYW------- 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 285 rdvvSRAMTLEI-RE-GRGVGPnkdhIYLHLDHLPAETLRErlpgISE--------TAKIF---AGVDVTKEPIP-VLPT 350
Cdd:PRK08275 280 ----SGQMMWEFyQElQSGNGP----VFLKLDHLAEETIQT----IETilhtnerpSRGRFhegRGTDYRQQMVEmHISE 347
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 351 VHYNMG----GVPTNWKAQclnptesdpnKIVPGLLAAGEAgsASVhganrlGANSLLDLVVFGRTAADTVAEIVKPNSP 426
Cdd:PRK08275 348 IGFCSGhsasGVWVNEKAE----------TTVPGLYAAGDM--ASV------PHNYMLGAFTYGWFAGENAAEYVAGRDL 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 294955192 427 PVTLPKDAgEATIDR-FDKIRHAKGpVSTADLRSKLQRTMQTRAPVYRNGDDLKKGCEEVREIMKEYKDVGIKDrtlvWN 505
Cdd:PRK08275 410 PEVDAAQV-EAERARvLAPLHREDG-LPPAQVEYKLRRLVNDYLQPPKVTRKMEIGLQRFAEIREDLERIKARD----PH 483
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 294955192 506 tDLIETLELENLITQAAQTIVSGEARKESRGA--HAREDFTERDDKKWMKHSL 556
Cdd:PRK08275 484 -ELMRALEVSSIRDCAEMAARASLFRTESRWGlyHYRVDFPERNDAEWFCHTH 535
|
|
| PRK12834 |
PRK12834 |
putative FAD-binding dehydrogenase; Reviewed |
355-419 |
7.19e-03 |
|
putative FAD-binding dehydrogenase; Reviewed
Pssm-ID: 183782 [Multi-domain] Cd Length: 549 Bit Score: 39.11 E-value: 7.19e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 294955192 355 MGGVPTNWKAQCLNPTesdpNKIVPGLLAAGEA---GSASVHGANRLGANSLLDLVVFGRTAADTVAE 419
Cdd:PRK12834 485 LGGLETDLDSRVLGAD----GTPLPGLYAAGEAagfGGGGVHGYNALEGTFLGGCIFSGRAAGRAAAR 548
|
|
| |
