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Conserved domains on  [gi|354491961|ref|XP_003508121|]
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tectonic-3 [Cricetulus griseus]

Protein Classification

tectonic family protein( domain architecture ID 10544302)

tectonic family protein is a DUF1619 domain-containing protein similar to Homo sapiens tectonic proteins which are components of the tectonic-like complex, a complex localized at the transition zone of primary cilia and acting as a barrier that prevents diffusion of transmembrane proteins between the cilia and plasma membranes

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TCTN_DUF1619 pfam07773
Tectonic domain DUF1619; This is a conserved domain found in tectonic proteins (TCTN1/2/3) ...
 103-378 1.49e-74

Tectonic domain DUF1619; This is a conserved domain found in tectonic proteins (TCTN1/2/3) which contains a Cys rich N-terminal region. Although its function is currently unknown (this domain is also known as DUF1619), studies in TCTN2 suggest that it is indispensable for normal functions. These proteins form a complex required for hedgehog signalling transduction.


:

Pssm-ID: 462260  Cd Length: 315  Bit Score: 240.53  E-value: 1.49e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354491961  103 RTVFSFCLPGSVRSSSWVCVDNSLIFRSNSPFP--SRVFTDASGITQFCVRVNNSK---LNYFQKLQTVNATN--FQALA 175
Cdd:pfam07773  25 LSTFSSCLVGVVSGDSQLCSQKSAIFRSNLPPQrlFGLVTDQINPDLFCVQSSNNNsplGSFFQPPTSVPTPSnfEDSLY 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354491961  176 AEFGGPSFTWTSETQPPLP-FYRAGHPILTYYPSWSVvSSLRQPAaVGAGGFCAESNPAGFLESKSTTCTRFFRDLASSC 254
Cdd:pfam07773 105 KKFTGFSFASESDVSSSTSsGYKVGDPIQTYNPSSSV-GYLTLPQ-SSLSGQCVDNNPVAFLQNQSTSCTRRVTDLLDSC 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354491961  255 TSEPALDAATYYNFTVLkvpRGMTDLQNTKLQVPVTLASQ----------------TRPPLLSGNTCQNIVSQVIYEIET 318
Cdd:pfam07773 183 TTLPALSAASYTSNFIL---PAVPNSQVVPVTVQSTYLQSlnsgllttltstslrgSPSPLLNNGTCRNVVLEVKYVITY 259

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 354491961  319 NGTSGIQKVSVSFRQTNLTVKPgVSLQQDFIIHFRAFGQRMdafPTGPRSGNPGYLIGKP 378
Cdd:pfam07773 260 NGTGGITEATVSLVLANVSASQ-LPLQQRFQVSFLSANSES---ASESRSGNPGYVVGKP 315
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 17-76 5.76e-03

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 39.92  E-value: 5.76e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 354491961   17 PDAAGPQPSPTQALPTSSALGPETPEVATAAPPPDWSEGPTPWTPPMPENVTTDLLPALP 76
Cdd:PHA03247  407 PAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDP 466
 
Name Accession Description Interval E-value
TCTN_DUF1619 pfam07773
Tectonic domain DUF1619; This is a conserved domain found in tectonic proteins (TCTN1/2/3) ...
 103-378 1.49e-74

Tectonic domain DUF1619; This is a conserved domain found in tectonic proteins (TCTN1/2/3) which contains a Cys rich N-terminal region. Although its function is currently unknown (this domain is also known as DUF1619), studies in TCTN2 suggest that it is indispensable for normal functions. These proteins form a complex required for hedgehog signalling transduction.


Pssm-ID: 462260  Cd Length: 315  Bit Score: 240.53  E-value: 1.49e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354491961  103 RTVFSFCLPGSVRSSSWVCVDNSLIFRSNSPFP--SRVFTDASGITQFCVRVNNSK---LNYFQKLQTVNATN--FQALA 175
Cdd:pfam07773  25 LSTFSSCLVGVVSGDSQLCSQKSAIFRSNLPPQrlFGLVTDQINPDLFCVQSSNNNsplGSFFQPPTSVPTPSnfEDSLY 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354491961  176 AEFGGPSFTWTSETQPPLP-FYRAGHPILTYYPSWSVvSSLRQPAaVGAGGFCAESNPAGFLESKSTTCTRFFRDLASSC 254
Cdd:pfam07773 105 KKFTGFSFASESDVSSSTSsGYKVGDPIQTYNPSSSV-GYLTLPQ-SSLSGQCVDNNPVAFLQNQSTSCTRRVTDLLDSC 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354491961  255 TSEPALDAATYYNFTVLkvpRGMTDLQNTKLQVPVTLASQ----------------TRPPLLSGNTCQNIVSQVIYEIET 318
Cdd:pfam07773 183 TTLPALSAASYTSNFIL---PAVPNSQVVPVTVQSTYLQSlnsgllttltstslrgSPSPLLNNGTCRNVVLEVKYVITY 259

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 354491961  319 NGTSGIQKVSVSFRQTNLTVKPgVSLQQDFIIHFRAFGQRMdafPTGPRSGNPGYLIGKP 378
Cdd:pfam07773 260 NGTGGITEATVSLVLANVSASQ-LPLQQRFQVSFLSANSES---ASESRSGNPGYVVGKP 315
PHA03247 PHA03247
large tegument protein UL36; Provisional
 17-76 5.76e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 39.92  E-value: 5.76e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 354491961   17 PDAAGPQPSPTQALPTSSALGPETPEVATAAPPPDWSEGPTPWTPPMPENVTTDLLPALP 76
Cdd:PHA03247  407 PAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDP 466
 
Name Accession Description Interval E-value
TCTN_DUF1619 pfam07773
Tectonic domain DUF1619; This is a conserved domain found in tectonic proteins (TCTN1/2/3) ...
 103-378 1.49e-74

Tectonic domain DUF1619; This is a conserved domain found in tectonic proteins (TCTN1/2/3) which contains a Cys rich N-terminal region. Although its function is currently unknown (this domain is also known as DUF1619), studies in TCTN2 suggest that it is indispensable for normal functions. These proteins form a complex required for hedgehog signalling transduction.


Pssm-ID: 462260  Cd Length: 315  Bit Score: 240.53  E-value: 1.49e-74
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354491961  103 RTVFSFCLPGSVRSSSWVCVDNSLIFRSNSPFP--SRVFTDASGITQFCVRVNNSK---LNYFQKLQTVNATN--FQALA 175
Cdd:pfam07773  25 LSTFSSCLVGVVSGDSQLCSQKSAIFRSNLPPQrlFGLVTDQINPDLFCVQSSNNNsplGSFFQPPTSVPTPSnfEDSLY 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354491961  176 AEFGGPSFTWTSETQPPLP-FYRAGHPILTYYPSWSVvSSLRQPAaVGAGGFCAESNPAGFLESKSTTCTRFFRDLASSC 254
Cdd:pfam07773 105 KKFTGFSFASESDVSSSTSsGYKVGDPIQTYNPSSSV-GYLTLPQ-SSLSGQCVDNNPVAFLQNQSTSCTRRVTDLLDSC 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 354491961  255 TSEPALDAATYYNFTVLkvpRGMTDLQNTKLQVPVTLASQ----------------TRPPLLSGNTCQNIVSQVIYEIET 318
Cdd:pfam07773 183 TTLPALSAASYTSNFIL---PAVPNSQVVPVTVQSTYLQSlnsgllttltstslrgSPSPLLNNGTCRNVVLEVKYVITY 259

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 354491961  319 NGTSGIQKVSVSFRQTNLTVKPgVSLQQDFIIHFRAFGQRMdafPTGPRSGNPGYLIGKP 378
Cdd:pfam07773 260 NGTGGITEATVSLVLANVSASQ-LPLQQRFQVSFLSANSES---ASESRSGNPGYVVGKP 315
PHA03247 PHA03247
large tegument protein UL36; Provisional
 17-76 5.76e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 39.92  E-value: 5.76e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 354491961   17 PDAAGPQPSPTQALPTSSALGPETPEVATAAPPPDWSEGPTPWTPPMPENVTTDLLPALP 76
Cdd:PHA03247  407 PAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGPAPPPERQPPAPATEPAPDDP 466
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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