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Conserved domains on  [gi|528482392|ref|XP_005165953|]
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histone deacetylase complex subunit SAP130a isoform X1 [Danio rerio]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
SAP130_C pfam16014
Histone deacetylase complex subunit SAP130 C-terminus;
650-1054 0e+00

Histone deacetylase complex subunit SAP130 C-terminus;


:

Pssm-ID: 464973 [Multi-domain]  Cd Length: 371  Bit Score: 544.91  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   650 TLVSSPRPSILRKKPVTEGAvrkcliqaqpsepnagrvdsgirlsgsprpagvKPKPDIHVAMAPPVMAAVEALVGHVGE 729
Cdd:pfam16014    1 ALGSSPRPSILRKKPATEGA---------------------------------KPKPDIHVAVAPPVTVAVEALPGQNSE 47
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   730 QQTLST--PVQHHSQAIPTLLAPPAPAPPSQPtaVLSALPATMAVTPPVPASMANAVASPTQPAASSTAALSSTL--PEV 805
Cdd:pfam16014   48 QQTASAspPSQHPAQAIPTILAPAAPPSQPSV--VLSTLPAAMAVTPPIPASMANVVAPPTQPAASSTAACAVSSvlPEI 125
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   806 KIKQEAEPMDTSQAVPlAPSLTGPAPSLSSQSSTLTVSsqPGELLPGASPRKKPRKQQHVISTEETEMVETNSTDEERAS 885
Cdd:pfam16014  126 KIKQEAEPMDTSQSVP-PLTPTSISPALTSLANNLSVP--AGDLLPGASPRKKPRKQQHVISTEEGEMMETNSTDEEKSA 202
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   886 SRAPGNRMERHESPPREYVDEDGVRYVPVRPRPPHTHLRQYRNPWKAAYHHFQRYSDIRVKEEKKGSLQDMANQRGVACR 965
Cdd:pfam16014  203 PKPLTSRAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKGTLQDMANQKGVTCR 282
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   966 AQGWKVHLCAAQLLQLSNLEHDVYSRLTTLQEGLIPKKRAGADDDLHRINELIQGNMQRCKLVMDQVTEARDTMMKVLDH 1045
Cdd:pfam16014  283 AQGWKIHLCAAQLLQLTNLEHDVYSRLTTLQEGLIPKKKAGTDDDLHRINELIQGNMQRCKLVMDQITEARDSMMKVLDH 362

                   ....*....
gi 528482392  1046 KDRVLKLLN 1054
Cdd:pfam16014  363 KDRVLKLLN 371
PHA03247 super family cl33720
large tegument protein UL36; Provisional
213-691 6.03e-07

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 54.17  E-value: 6.03e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  213 RGSAPLQIGSPATPHTFTSHLPRGAAAAAVMSSTKGPNVlRPAGGGSAGPSQPAAVQHIIHQPIQSRSLVTTSTAVLPTM 292
Cdd:PHA03247 2588 RPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDP-PPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRR 2666
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  293 V-APIPAARTQSPVINTTVTHATEMVHGRPVAIHPPPATINIQRPPTPRDTATRITLPSHPAIGGQKAQPPHTVTQKPIF 371
Cdd:PHA03247 2667 ArRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPA 2746
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  372 NTVTPVAAATVAPILATNTVPSATTTGSAAHTQMTSSTIVTMTMASHSSHATAVTTSAIPVAKVVPQPIAhtshspriqq 451
Cdd:PHA03247 2747 GPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAA---------- 2816
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  452 eysgerpnLIPISGHRSSPNPVTMEArsdnrpsvpvqfqyfLPTYPSPSYPLSHTYTPITSSVSTIRPYPVTAPAQSSAl 531
Cdd:PHA03247 2817 --------ALPPAASPAGPLPPPTSA---------------QPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA- 2872
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  532 paqtgVGVATTMHLnQMQLMALPSAQISTQNI-QPASMTAQGIQPAPigvqglhAAAPISTQTVQQAPVTTQQPQSEAKP 610
Cdd:PHA03247 2873 -----AKPAAPARP-PVRRLARPAVSRSTESFaLPPDQPERPPQPQA-------PPPPQPQPQPPPPPQPQPPPPPPPRP 2939
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  611 agvvlaESPAfvtNPIGSTFSGTQPVTTIVQTHTGAGAPTLVSSPRPSILRKKPVTEgavrkclIQAQPSEPNAGRVDSG 690
Cdd:PHA03247 2940 ------QPPL---APTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSRE-------APASSTPPLTGHSLSR 3003

                  .
gi 528482392  691 I 691
Cdd:PHA03247 3004 V 3004
 
Name Accession Description Interval E-value
SAP130_C pfam16014
Histone deacetylase complex subunit SAP130 C-terminus;
650-1054 0e+00

Histone deacetylase complex subunit SAP130 C-terminus;


Pssm-ID: 464973 [Multi-domain]  Cd Length: 371  Bit Score: 544.91  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   650 TLVSSPRPSILRKKPVTEGAvrkcliqaqpsepnagrvdsgirlsgsprpagvKPKPDIHVAMAPPVMAAVEALVGHVGE 729
Cdd:pfam16014    1 ALGSSPRPSILRKKPATEGA---------------------------------KPKPDIHVAVAPPVTVAVEALPGQNSE 47
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   730 QQTLST--PVQHHSQAIPTLLAPPAPAPPSQPtaVLSALPATMAVTPPVPASMANAVASPTQPAASSTAALSSTL--PEV 805
Cdd:pfam16014   48 QQTASAspPSQHPAQAIPTILAPAAPPSQPSV--VLSTLPAAMAVTPPIPASMANVVAPPTQPAASSTAACAVSSvlPEI 125
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   806 KIKQEAEPMDTSQAVPlAPSLTGPAPSLSSQSSTLTVSsqPGELLPGASPRKKPRKQQHVISTEETEMVETNSTDEERAS 885
Cdd:pfam16014  126 KIKQEAEPMDTSQSVP-PLTPTSISPALTSLANNLSVP--AGDLLPGASPRKKPRKQQHVISTEEGEMMETNSTDEEKSA 202
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   886 SRAPGNRMERHESPPREYVDEDGVRYVPVRPRPPHTHLRQYRNPWKAAYHHFQRYSDIRVKEEKKGSLQDMANQRGVACR 965
Cdd:pfam16014  203 PKPLTSRAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKGTLQDMANQKGVTCR 282
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   966 AQGWKVHLCAAQLLQLSNLEHDVYSRLTTLQEGLIPKKRAGADDDLHRINELIQGNMQRCKLVMDQVTEARDTMMKVLDH 1045
Cdd:pfam16014  283 AQGWKIHLCAAQLLQLTNLEHDVYSRLTTLQEGLIPKKKAGTDDDLHRINELIQGNMQRCKLVMDQITEARDSMMKVLDH 362

                   ....*....
gi 528482392  1046 KDRVLKLLN 1054
Cdd:pfam16014  363 KDRVLKLLN 371
PHA03247 PHA03247
large tegument protein UL36; Provisional
213-691 6.03e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 54.17  E-value: 6.03e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  213 RGSAPLQIGSPATPHTFTSHLPRGAAAAAVMSSTKGPNVlRPAGGGSAGPSQPAAVQHIIHQPIQSRSLVTTSTAVLPTM 292
Cdd:PHA03247 2588 RPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDP-PPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRR 2666
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  293 V-APIPAARTQSPVINTTVTHATEMVHGRPVAIHPPPATINIQRPPTPRDTATRITLPSHPAIGGQKAQPPHTVTQKPIF 371
Cdd:PHA03247 2667 ArRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPA 2746
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  372 NTVTPVAAATVAPILATNTVPSATTTGSAAHTQMTSSTIVTMTMASHSSHATAVTTSAIPVAKVVPQPIAhtshspriqq 451
Cdd:PHA03247 2747 GPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAA---------- 2816
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  452 eysgerpnLIPISGHRSSPNPVTMEArsdnrpsvpvqfqyfLPTYPSPSYPLSHTYTPITSSVSTIRPYPVTAPAQSSAl 531
Cdd:PHA03247 2817 --------ALPPAASPAGPLPPPTSA---------------QPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA- 2872
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  532 paqtgVGVATTMHLnQMQLMALPSAQISTQNI-QPASMTAQGIQPAPigvqglhAAAPISTQTVQQAPVTTQQPQSEAKP 610
Cdd:PHA03247 2873 -----AKPAAPARP-PVRRLARPAVSRSTESFaLPPDQPERPPQPQA-------PPPPQPQPQPPPPPQPQPPPPPPPRP 2939
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  611 agvvlaESPAfvtNPIGSTFSGTQPVTTIVQTHTGAGAPTLVSSPRPSILRKKPVTEgavrkclIQAQPSEPNAGRVDSG 690
Cdd:PHA03247 2940 ------QPPL---APTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSRE-------APASSTPPLTGHSLSR 3003

                  .
gi 528482392  691 I 691
Cdd:PHA03247 3004 V 3004
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
276-650 2.05e-04

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 45.68  E-value: 2.05e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   276 IQSRSLVTTSTAVLPTMVAPIPAARTQSPVINTTVTHATEMVHGRPVAIHPPpatINIQRPPTPRDTATRITLPSHPAIG 355
Cdd:pfam05109  404 IITRTATNATTTTHKVIFSKAPESTTTSPTLNTTGFAAPNTTTGLPSSTHVP---TNLTAPASTGPTVSTADVTSPTPAG 480
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   356 GQKAQPPHTVTQKPIFNTVTPVAAATVAPILATNT-VPSATTTGSAAHTQMTSSTIVTMTMASHSSHATAVTTSAIPVAK 434
Cdd:pfam05109  481 TTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTpTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPTP 560
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   435 VVPQPIAH----TSHSPRIQQEYSGERPNLIPISGHRSSPNPVTMEARSDNRPSVPVQFQyflPTYPSPSYPLSHTYTPI 510
Cdd:pfam05109  561 AVTTPTPNatipTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTS---PPKNATSAVTTGQHNIT 637
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   511 TSSVSTIRPYPVTApaqSSALPAQTGVGVATTMHLnqmQLMALPSAQISTQNIQPASMTAQGI---QPAPIGVQGLHAAA 587
Cdd:pfam05109  638 SSSTSSMSLRPSSI---SETLSPSTSDNSTSHMPL---LTSAHPTGGENITQVTPASTSTHHVstsSPAPRPGTTSQASG 711
                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 528482392   588 PISTQTVQQAPVTTQQPQSEAKPAGVVLAESPAFVTNPIGSTFSGTQPVTTIVQTHTGAGAPT 650
Cdd:pfam05109  712 PGNSSTSTKPGEVNVTKGTPPKNATSPQAPSGQKTAVPTVTSTGGKANSTTGGKHTTGHGART 774
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
215-435 5.80e-03

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 40.51  E-value: 5.80e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  215 SAPLQIGSPATPHTFTSHLPRGAAAAAVMSSTKGPNVLRPAGGGSAGPSQPAAVQHIIHQPIQSRSLVTTSTAVLPTMVA 294
Cdd:COG3469     1 SSSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  295 PIPAARTQSPVINTTVTHATEMVHGRPVAIHPPPATINIQRPPTPRDTATRITLPSHPAIGGQKAQPPHTVTQKPIFNTV 374
Cdd:COG3469    81 TATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETAT 160
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 528482392  375 TPVAAATvapilATNTVPSATTTGSAAhtqmTSSTIVTMTMASHSSHATAVTTSAIPVAKV 435
Cdd:COG3469   161 GGTTTTS-----TTTTTTSASTTPSAT----TTATATTASGATTPSATTTATTTGPPTPGL 212
 
Name Accession Description Interval E-value
SAP130_C pfam16014
Histone deacetylase complex subunit SAP130 C-terminus;
650-1054 0e+00

Histone deacetylase complex subunit SAP130 C-terminus;


Pssm-ID: 464973 [Multi-domain]  Cd Length: 371  Bit Score: 544.91  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   650 TLVSSPRPSILRKKPVTEGAvrkcliqaqpsepnagrvdsgirlsgsprpagvKPKPDIHVAMAPPVMAAVEALVGHVGE 729
Cdd:pfam16014    1 ALGSSPRPSILRKKPATEGA---------------------------------KPKPDIHVAVAPPVTVAVEALPGQNSE 47
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   730 QQTLST--PVQHHSQAIPTLLAPPAPAPPSQPtaVLSALPATMAVTPPVPASMANAVASPTQPAASSTAALSSTL--PEV 805
Cdd:pfam16014   48 QQTASAspPSQHPAQAIPTILAPAAPPSQPSV--VLSTLPAAMAVTPPIPASMANVVAPPTQPAASSTAACAVSSvlPEI 125
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   806 KIKQEAEPMDTSQAVPlAPSLTGPAPSLSSQSSTLTVSsqPGELLPGASPRKKPRKQQHVISTEETEMVETNSTDEERAS 885
Cdd:pfam16014  126 KIKQEAEPMDTSQSVP-PLTPTSISPALTSLANNLSVP--AGDLLPGASPRKKPRKQQHVISTEEGEMMETNSTDEEKSA 202
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   886 SRAPGNRMERHESPPREYVDEDGVRYVPVRPRPPHTHLRQYRNPWKAAYHHFQRYSDIRVKEEKKGSLQDMANQRGVACR 965
Cdd:pfam16014  203 PKPLTSRAEKRKSPPKEYIDEEGVRYVPVRPRPPITLLRHYRNPWKAAYHHFQRYSDVRVKEEKKGTLQDMANQKGVTCR 282
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   966 AQGWKVHLCAAQLLQLSNLEHDVYSRLTTLQEGLIPKKRAGADDDLHRINELIQGNMQRCKLVMDQVTEARDTMMKVLDH 1045
Cdd:pfam16014  283 AQGWKIHLCAAQLLQLTNLEHDVYSRLTTLQEGLIPKKKAGTDDDLHRINELIQGNMQRCKLVMDQITEARDSMMKVLDH 362

                   ....*....
gi 528482392  1046 KDRVLKLLN 1054
Cdd:pfam16014  363 KDRVLKLLN 371
PHA03247 PHA03247
large tegument protein UL36; Provisional
213-691 6.03e-07

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 54.17  E-value: 6.03e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  213 RGSAPLQIGSPATPHTFTSHLPRGAAAAAVMSSTKGPNVlRPAGGGSAGPSQPAAVQHIIHQPIQSRSLVTTSTAVLPTM 292
Cdd:PHA03247 2588 RPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDP-PPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRR 2666
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  293 V-APIPAARTQSPVINTTVTHATEMVHGRPVAIHPPPATINIQRPPTPRDTATRITLPSHPAIGGQKAQPPHTVTQKPIF 371
Cdd:PHA03247 2667 ArRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPA 2746
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  372 NTVTPVAAATVAPILATNTVPSATTTGSAAHTQMTSSTIVTMTMASHSSHATAVTTSAIPVAKVVPQPIAhtshspriqq 451
Cdd:PHA03247 2747 GPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAA---------- 2816
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  452 eysgerpnLIPISGHRSSPNPVTMEArsdnrpsvpvqfqyfLPTYPSPSYPLSHTYTPITSSVSTIRPYPVTAPAQSSAl 531
Cdd:PHA03247 2817 --------ALPPAASPAGPLPPPTSA---------------QPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA- 2872
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  532 paqtgVGVATTMHLnQMQLMALPSAQISTQNI-QPASMTAQGIQPAPigvqglhAAAPISTQTVQQAPVTTQQPQSEAKP 610
Cdd:PHA03247 2873 -----AKPAAPARP-PVRRLARPAVSRSTESFaLPPDQPERPPQPQA-------PPPPQPQPQPPPPPQPQPPPPPPPRP 2939
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  611 agvvlaESPAfvtNPIGSTFSGTQPVTTIVQTHTGAGAPTLVSSPRPSILRKKPVTEgavrkclIQAQPSEPNAGRVDSG 690
Cdd:PHA03247 2940 ------QPPL---APTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSRE-------APASSTPPLTGHSLSR 3003

                  .
gi 528482392  691 I 691
Cdd:PHA03247 3004 V 3004
PHA03247 PHA03247
large tegument protein UL36; Provisional
91-448 4.34e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 48.01  E-value: 4.34e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   91 VRPYPQVQAPGQsPALPQHVPIQPSPPvtlAAPSvhllqgqqpslTEGSVKATLKPPMPSRLIAPAPALSQGHIPVPAKV 170
Cdd:PHA03247 2661 VSRPRRARRLGR-AAQASSPPQRPRRR---AARP-----------TVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGP 2725
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  171 SGHITVPLESSIAPASIPVATISGQQGqsnlhqlmatnvqifrgsAPLQIGSPATPHTftshlPRGAAAAAVMSSTKGPN 250
Cdd:PHA03247 2726 AAARQASPALPAAPAPPAVPAGPATPG------------------GPARPARPPTTAG-----PPAPAPPAAPAAGPPRR 2782
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  251 VLRPAGGGSA-------GPSQPAAVQHIIHQPIQSRSLVTTSTAVLPTMVAPIPAA-RTQSPVINTTVTHATEMVHGRPV 322
Cdd:PHA03247 2783 LTRPAVASLSesreslpSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTApPPPPGPPPPSLPLGGSVAPGGDV 2862
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  323 AIHPPPATINIQRPPTPRDTATRITLP-------SHPAIGGQKAQPPHTVTQKPIFNTVTPVAAATVAPILATNTVPS-- 393
Cdd:PHA03247 2863 RRRPPSRSPAAKPAAPARPPVRRLARPavsrsteSFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQpp 2942
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 528482392  394 -ATTTGSAAHTQMTSSTIVTMTMASHSSHATAVTTSAIPVAKVVPQPiAHTSHSPR 448
Cdd:PHA03247 2943 lAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAP-ASSTPPLT 2997
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
276-650 2.05e-04

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 45.68  E-value: 2.05e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   276 IQSRSLVTTSTAVLPTMVAPIPAARTQSPVINTTVTHATEMVHGRPVAIHPPpatINIQRPPTPRDTATRITLPSHPAIG 355
Cdd:pfam05109  404 IITRTATNATTTTHKVIFSKAPESTTTSPTLNTTGFAAPNTTTGLPSSTHVP---TNLTAPASTGPTVSTADVTSPTPAG 480
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   356 GQKAQPPHTVTQKPIFNTVTPVAAATVAPILATNT-VPSATTTGSAAHTQMTSSTIVTMTMASHSSHATAVTTSAIPVAK 434
Cdd:pfam05109  481 TTSGASPVTPSPSPRDNGTESKAPDMTSPTSAVTTpTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPTPNATSPTP 560
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   435 VVPQPIAH----TSHSPRIQQEYSGERPNLIPISGHRSSPNPVTMEARSDNRPSVPVQFQyflPTYPSPSYPLSHTYTPI 510
Cdd:pfam05109  561 AVTTPTPNatipTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTS---PPKNATSAVTTGQHNIT 637
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   511 TSSVSTIRPYPVTApaqSSALPAQTGVGVATTMHLnqmQLMALPSAQISTQNIQPASMTAQGI---QPAPIGVQGLHAAA 587
Cdd:pfam05109  638 SSSTSSMSLRPSSI---SETLSPSTSDNSTSHMPL---LTSAHPTGGENITQVTPASTSTHHVstsSPAPRPGTTSQASG 711
                          330       340       350       360       370       380
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 528482392   588 PISTQTVQQAPVTTQQPQSEAKPAGVVLAESPAFVTNPIGSTFSGTQPVTTIVQTHTGAGAPT 650
Cdd:pfam05109  712 PGNSSTSTKPGEVNVTKGTPPKNATSPQAPSGQKTAVPTVTSTGGKANSTTGGKHTTGHGART 774
Chi1 COG3469
Chitinase [Carbohydrate transport and metabolism];
215-435 5.80e-03

Chitinase [Carbohydrate transport and metabolism];


Pssm-ID: 442692 [Multi-domain]  Cd Length: 534  Bit Score: 40.51  E-value: 5.80e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  215 SAPLQIGSPATPHTFTSHLPRGAAAAAVMSSTKGPNVLRPAGGGSAGPSQPAAVQHIIHQPIQSRSLVTTSTAVLPTMVA 294
Cdd:COG3469     1 SSSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTA 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  295 PIPAARTQSPVINTTVTHATEMVHGRPVAIHPPPATINIQRPPTPRDTATRITLPSHPAIGGQKAQPPHTVTQKPIFNTV 374
Cdd:COG3469    81 TATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETAT 160
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 528482392  375 TPVAAATvapilATNTVPSATTTGSAAhtqmTSSTIVTMTMASHSSHATAVTTSAIPVAKV 435
Cdd:COG3469   161 GGTTTTS-----TTTTTTSASTTPSAT----TTATATTASGATTPSATTTATTTGPPTPGL 212
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
236-576 7.66e-03

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 40.33  E-value: 7.66e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   236 GAAAAAVMSSTKGPNVLRPAGGGSAGPSQPAAVQHIIHQPIQSRSLVTTSTAVLPTMVAPIPAARTQSPVINTTVTHATE 315
Cdd:pfam17823  105 GAADGAASRALAAAASSSPSSAAQSLPAAIAALPSEAFSAPRAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTA 184
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   316 MVHGRPVAIHPPPATINIQRPPTP-RDTATRITLPSHPAIGGQKAQPPHTV----TQKPIFNTVTPVAAATVAPILATNT 390
Cdd:pfam17823  185 ASSTTAASSAPTTAASSAPATLTPaRGISTAATATGHPAAGTALAAVGNSSpaagTVTAAVGTVTPAALATLAAAAGTVA 264
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   391 VPSATTTGSAAHTQMTS--STIVTMTMASHSSHATAVTTSAIPVAKVVPQPIAHTSHSPRIQQEYSGERPNLIPISGHRS 468
Cdd:pfam17823  265 SAAGTINMGDPHARRLSpaKHMPSDTMARNPAAPMGAQAQGPIIQVSTDQPVHNTAGEPTPSPSNTTLEPNTPKSVASTN 344
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392   469 SPNPVTMEARSDNRPSVPVQfqyFLPTYPSPSYPLSHTYT---PITSSVSTIRPYPVTAPAQ--SSALPAQTGVGvATTM 543
Cdd:pfam17823  345 LAVVTTTKAQAKEPSASPVP---VLHTSMIPEVEATSPTTqpsPLLPTQGAAGPGILLAPEQvaTEATAGTASAG-PTPR 420
                          330       340       350
                   ....*....|....*....|....*....|...
gi 528482392   544 HLNQMQLMALPSAQISTQNiQPASMTAQGIQPA 576
Cdd:pfam17823  421 SSGDPKTLAMASCQLSTQG-QYLVVTTDPLTPA 452
PHA03247 PHA03247
large tegument protein UL36; Provisional
258-847 9.88e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 40.31  E-value: 9.88e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  258 GSAGPSQPAAVQHIIHQPIQSRSLVTTSTAVLPTMVAPIPAARTQSPVINTTVTHATEMVHGRPVAIHPPPATiniQRPP 337
Cdd:PHA03247 2610 GPAPPSPLPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQR---PRRR 2686
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  338 TPRDTATRITLPSHPAIGGQKAQPPHTVTQKPIFNTVTPVAAATVAPILATNTVPSATTTGSAAHTQMTSSTIVTMTMAS 417
Cdd:PHA03247 2687 AARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGP 2766
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  418 HSSHATAVTTSAIPVAKVVPqPIAHTSHSPRIQQEYSGERPNLIPISGHRSSPNPVTMEARSDNRPSVPVqfqyflPTYP 497
Cdd:PHA03247 2767 PAPAPPAAPAAGPPRRLTRP-AVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQ------PTAP 2839
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  498 SPSYPLSHTYTPITSSVSTIRPYPVTAPAQSSAlpaqtgVGVATTMHLnQMQLMALPSAQISTQNI-QPASMTAQGIQPA 576
Cdd:PHA03247 2840 PPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPA------AKPAAPARP-PVRRLARPAVSRSTESFaLPPDQPERPPQPQ 2912
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  577 PigvqglhAAAPISTQTVQQAPVTTQQPQSEAKPagvvlaESPAfvtNPIGSTFSGTQPVTTIVQTHTGAGAPTLVSSPR 656
Cdd:PHA03247 2913 A-------PPPPQPQPQPPPPPQPQPPPPPPPRP------QPPL---APTTDPAGAGEPSGAVPQPWLGALVPGRVAVPR 2976
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  657 PSILRKKPvtegavrkcliqaqpsepnagrvdsgirlsgsPRPAGVKPKPDIHVAMAPPVMAAVEALVGHVGeqqtlstp 736
Cdd:PHA03247 2977 FRVPQPAP--------------------------------SREAPASSTPPLTGHSLSRVSSWASSLALHEE-------- 3016
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 528482392  737 vqhhsqaiptllappapappsqptavlsalpatmavTPPVPASMANAVASPTQPAASSTAALSSTLPEvkiKQEAEPMDT 816
Cdd:PHA03247 3017 ------------------------------------TDPPPVSLKQTLWPPDDTEDSDADSLFDSDSE---RSDLEALDP 3057
                         570       580       590
                  ....*....|....*....|....*....|.
gi 528482392  817 SQAVPLAPSLTGPAPSLSSQSSTLTVSSQPG 847
Cdd:PHA03247 3058 LPPEPHDPFAHEPDPATPEAGARESPSSQFG 3088
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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