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Conserved domains on  [gi|1387218110|ref|XP_005201023|]
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uncharacterized protein LOC512219 isoform X1 [Bos taurus]

Protein Classification

cationic amino acid transporter( domain architecture ID 1903485)

cationic amino acid transporter are involved in the transport of the cationic amino acids

Gene Ontology:  GO:0006865|GO:0015171
PubMed:  10931886
TCDB:  2.A.3.3

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
2A0303 super family cl47123
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
6-602 0e+00

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


The actual alignment was detected with superfamily member TIGR00906:

Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 524.38  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110   6 VHQFGQKLIRRQRLRPREGPEKRTARRLNTLDLIALGLGGTLGNGMYILVGEVSVYEAGPAIIICYLLAGLSTLLSGLCY 85
Cdd:TIGR00906   3 VLTFARCLIRRKIVDLDSREESKMKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDSGPAIVLSFLISGLAAVLSGFCY 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  86 AELAARVPRSGSVYLYSYVTMGQLCAFITGWNLILSYVMGTACVSRAWSAAFDSLIGNHISQAFQGTFSLNVPYFlATYA 165
Cdd:TIGR00906  83 AEFGARVPKAGSAYLYSYVTVGELWAFITGWNLILEYVIGTAAVARSWSAYFDELLNKQIGQFRRTYFKLNYDGL-AEYP 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 166 DFFALGLVLLLTGLLFLGARESTLVNKVFTGLNLLVLSFTILSGFIKGDPHNWKLTEEDyrlatsgssdtyslgplGSGG 245
Cdd:TIGR00906 162 DFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTKADVANWSITEEK-----------------GAGG 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 246 FLPFGFEGILQGAATCVYAFVGFDVIATTGKEVQNPRRSIPLGIVITIFIGFLAYFGVSAALTLMVPYYQIQPQSPLLQA 325
Cdd:TIGR00906 225 FMPYGFTGVLSGAATCFFAFIGFDAIATTGEEVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPDAPFPVA 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 326 FLHVGWNPARYVVAVGTLCALTSSLLGTMFTMPRLIYVMAEDGLLFRGLARLHGHRGTPIWAILVSGMLAAVLALLLELI 405
Cdd:TIGR00906 305 FEYVGWDPAKYIVAVGALCGMSTSLLGGMFPLPRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLFDLK 384
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 406 DLVYLVSIGTLLAYSLVAFSVLVLRYQPEQNFSKNEKKDDEIDISQWE--ASPSEPASEAGTSRTLKTLWFPTSTTPTVK 483
Cdd:TIGR00906 385 ALVDLLSIGTLLAYSLVAACVLILRYQPGLVYDQAKDTDEKDTLDSWVpfTSKSESQSEGFSLRTLFSGLILGLSILTTY 464
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 484 SGQIVYGCAfllvllliilslvlaqWPSQVFSGDPVLTTVavlllllitgVMAIIWRQPQDPTPLHFKVPALPVLPLVSI 563
Cdd:TIGR00906 465 GRAAIAEEA----------------WSIALLTLFLVLFLL----------VVLTIWRQPQNKQKVAFKVPLVPFLPALSI 518
                         570       580       590
                  ....*....|....*....|....*....|....*....
gi 1387218110 564 FVNIYLLMQMNTGTWVLFGIWMVIGFAIYFGYGIRHSLE 602
Cdd:TIGR00906 519 LINIFLMVQLDADTWVRFAIWMAIGFLIYFLYGIRHSLE 557
 
Name Accession Description Interval E-value
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
6-602 0e+00

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 524.38  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110   6 VHQFGQKLIRRQRLRPREGPEKRTARRLNTLDLIALGLGGTLGNGMYILVGEVSVYEAGPAIIICYLLAGLSTLLSGLCY 85
Cdd:TIGR00906   3 VLTFARCLIRRKIVDLDSREESKMKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDSGPAIVLSFLISGLAAVLSGFCY 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  86 AELAARVPRSGSVYLYSYVTMGQLCAFITGWNLILSYVMGTACVSRAWSAAFDSLIGNHISQAFQGTFSLNVPYFlATYA 165
Cdd:TIGR00906  83 AEFGARVPKAGSAYLYSYVTVGELWAFITGWNLILEYVIGTAAVARSWSAYFDELLNKQIGQFRRTYFKLNYDGL-AEYP 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 166 DFFALGLVLLLTGLLFLGARESTLVNKVFTGLNLLVLSFTILSGFIKGDPHNWKLTEEDyrlatsgssdtyslgplGSGG 245
Cdd:TIGR00906 162 DFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTKADVANWSITEEK-----------------GAGG 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 246 FLPFGFEGILQGAATCVYAFVGFDVIATTGKEVQNPRRSIPLGIVITIFIGFLAYFGVSAALTLMVPYYQIQPQSPLLQA 325
Cdd:TIGR00906 225 FMPYGFTGVLSGAATCFFAFIGFDAIATTGEEVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPDAPFPVA 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 326 FLHVGWNPARYVVAVGTLCALTSSLLGTMFTMPRLIYVMAEDGLLFRGLARLHGHRGTPIWAILVSGMLAAVLALLLELI 405
Cdd:TIGR00906 305 FEYVGWDPAKYIVAVGALCGMSTSLLGGMFPLPRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLFDLK 384
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 406 DLVYLVSIGTLLAYSLVAFSVLVLRYQPEQNFSKNEKKDDEIDISQWE--ASPSEPASEAGTSRTLKTLWFPTSTTPTVK 483
Cdd:TIGR00906 385 ALVDLLSIGTLLAYSLVAACVLILRYQPGLVYDQAKDTDEKDTLDSWVpfTSKSESQSEGFSLRTLFSGLILGLSILTTY 464
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 484 SGQIVYGCAfllvllliilslvlaqWPSQVFSGDPVLTTVavlllllitgVMAIIWRQPQDPTPLHFKVPALPVLPLVSI 563
Cdd:TIGR00906 465 GRAAIAEEA----------------WSIALLTLFLVLFLL----------VVLTIWRQPQNKQKVAFKVPLVPFLPALSI 518
                         570       580       590
                  ....*....|....*....|....*....|....*....
gi 1387218110 564 FVNIYLLMQMNTGTWVLFGIWMVIGFAIYFGYGIRHSLE 602
Cdd:TIGR00906 519 LINIFLMVQLDADTWVRFAIWMAIGFLIYFLYGIRHSLE 557
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
23-431 1.04e-63

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 216.69  E-value: 1.04e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  23 EGPEKRTARRLNTLDLIALGLGGTLGNGMYILVGEVSVYeAGPAIIICYLLAGLSTLLSGLCYAELAARVPRSGSVYLYS 102
Cdd:COG0531     3 RGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGL-AGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 103 YVTMGQLCAFITGWNLILSYVMGTACVSRAWSAAFDSLIGNHISQAFQGTFslnvpYFLATYADFFalglvllltgllfl 182
Cdd:COG0531    82 RRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVL-----ILLLTLLNLR-------------- 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 183 GARESTLVNKVFTGLNLLVLSFTILSGFIKGDPHNWKlteedyrlatsgssdtyslgplgsgGFLPF--GFEGILQGAAT 260
Cdd:COG0531   143 GVKESAKVNNILTVLKLLVLLLFIVVGLFAFDPANFT-------------------------PFLPAggGLSGVLAALAL 197
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 261 CVYAFVGFDVIATTGKEVQNPRRSIPLGIVITIFIGFLAYFGVSAALTLMVPYYQI-QPQSPLLQAFLHVGWNPARYVVA 339
Cdd:COG0531   198 AFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYILVSLALTGVVPYDELaASGAPLADAAEAVFGPWGAILIA 277
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 340 VGTLCALTSSLLGTMFTMPRLIYVMAEDGLLFRGLARLHGHRGTPIWAILVSG--MLAAVLALLLELIDLVYLVSIGTLL 417
Cdd:COG0531   278 LGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKVHPRFGTPVNAILLTGviALLLLLLGAASFTALASLASVGVLL 357
                         410
                  ....*....|....
gi 1387218110 418 AYSLVAFSVLVLRY 431
Cdd:COG0531   358 AYLLVALAVIVLRR 371
AA_permease pfam00324
Amino acid permease;
58-391 8.52e-23

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 102.01  E-value: 8.52e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  58 VSVYEAGPA-IIICYLLAGLSTLLSGLCYAELAARVPRSGSVYLYSYVTMGQLCAFITGWNLILSYVMGtacvsrawsAA 136
Cdd:pfam00324  21 SVLGQAGPAgALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGWNYWLSWITV---------LA 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 137 FDSLIGNHISQaFQGTFSlNVPYFLATYADFFALGLVLLLTGLLFLGARES-TLVNKVFTGLNLLVLSFTILSGFIKGDp 215
Cdd:pfam00324  92 LELTAASILIQ-FWELVP-DIPYLWVWGAVFLVLLTIINLVGVKWYGEAEFwFALIKIIAIIGFIIVGIILLSGGNPND- 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 216 hnwklteedyrlatsGSSDTYSLGPLGSGGFLPFGFEGILQGAATCVYAFVGFDVIATTGKEVQNPRRSIPLGIVITIFI 295
Cdd:pfam00324 169 ---------------GAIFRYLGDNGGKNNFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWR 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 296 GFLAYFGVSAALTLMVPY-------YQIQPQSPLLQAFLHVGWNPARYVVAVGTLCALTSSLLGTMFTMPRLIYVMAEDG 368
Cdd:pfam00324 234 ITIFYILSLLAIGLLVPWndpgllnDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDG 313
                         330       340
                  ....*....|....*....|...
gi 1387218110 369 LLFRGLARlHGHRGTPIWAILVS 391
Cdd:pfam00324 314 LAPKFLKK-VDKRGVPLRAILVS 335
PRK10238 PRK10238
aromatic amino acid transporter AroP;
53-393 1.09e-13

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 73.45  E-value: 1.09e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  53 ILVGEVSVYE-AGPAIIICYLLAGLSTLLSGLCYAELAARVPRSGSVYLYSYVTMGQLCAFITGWNLILSYVMgtacVSR 131
Cdd:PRK10238   32 LFLGSASVIQsAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVLYVL----VAM 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 132 AWSAAfdslIGNHISQAFQgtfslNVPYFlATYADFFALGLVLLLTGLLFLGARESTlvnkvFTGLNLLVLSFTILSGfi 211
Cdd:PRK10238  108 AELTA----VGKYIQFWYP-----EIPTW-VSAAVFFVVINAINLTNVKVFGEMEFW-----FAIIKVIAVVAMIIFG-- 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 212 kgdphNWKLteedyrLATSGSSDTYSLGPLGSGGFLPFGFEGILQGAATCVYAFVGFDVIATTGKEVQNPRRSIPLGIVI 291
Cdd:PRK10238  171 -----GWLL------FSGNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 292 TIFIGFLAYFGVSAALTLMVPYYQIQPQ-SPLLQAFLHVGWNPARYVVAVGTLCALTSSLLGTMFTMPRLIYVMAEDGLL 370
Cdd:PRK10238  240 VIYRILIFYIGSLAVLLSLMPWTRVTADtSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNA 319
                         330       340
                  ....*....|....*....|...
gi 1387218110 371 FRGLARLHgHRGTPIWAILVSGM 393
Cdd:PRK10238  320 PKALASVD-KRGVPVNTILVSAL 341
 
Name Accession Description Interval E-value
2A0303 TIGR00906
cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides ...
6-602 0e+00

cationic amino acid transport permease; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273330 [Multi-domain]  Cd Length: 557  Bit Score: 524.38  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110   6 VHQFGQKLIRRQRLRPREGPEKRTARRLNTLDLIALGLGGTLGNGMYILVGEVSVYEAGPAIIICYLLAGLSTLLSGLCY 85
Cdd:TIGR00906   3 VLTFARCLIRRKIVDLDSREESKMKRCLTTWDLMALGIGSTIGAGIYVLTGEVARNDSGPAIVLSFLISGLAAVLSGFCY 82
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  86 AELAARVPRSGSVYLYSYVTMGQLCAFITGWNLILSYVMGTACVSRAWSAAFDSLIGNHISQAFQGTFSLNVPYFlATYA 165
Cdd:TIGR00906  83 AEFGARVPKAGSAYLYSYVTVGELWAFITGWNLILEYVIGTAAVARSWSAYFDELLNKQIGQFRRTYFKLNYDGL-AEYP 161
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 166 DFFALGLVLLLTGLLFLGARESTLVNKVFTGLNLLVLSFTILSGFIKGDPHNWKLTEEDyrlatsgssdtyslgplGSGG 245
Cdd:TIGR00906 162 DFFAVCLILLLAVLLSFGVKESAWVNKIFTAINILVLLFVIIAGFTKADVANWSITEEK-----------------GAGG 224
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 246 FLPFGFEGILQGAATCVYAFVGFDVIATTGKEVQNPRRSIPLGIVITIFIGFLAYFGVSAALTLMVPYYQIQPQSPLLQA 325
Cdd:TIGR00906 225 FMPYGFTGVLSGAATCFFAFIGFDAIATTGEEVKNPQRAIPIGIVTSLLVCFVAYFLMSAALTLMMPYYLLDPDAPFPVA 304
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 326 FLHVGWNPARYVVAVGTLCALTSSLLGTMFTMPRLIYVMAEDGLLFRGLARLHGHRGTPIWAILVSGMLAAVLALLLELI 405
Cdd:TIGR00906 305 FEYVGWDPAKYIVAVGALCGMSTSLLGGMFPLPRVIYAMARDGLLFKWLAQINSKTKTPINATVVSGAIAALMAFLFDLK 384
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 406 DLVYLVSIGTLLAYSLVAFSVLVLRYQPEQNFSKNEKKDDEIDISQWE--ASPSEPASEAGTSRTLKTLWFPTSTTPTVK 483
Cdd:TIGR00906 385 ALVDLLSIGTLLAYSLVAACVLILRYQPGLVYDQAKDTDEKDTLDSWVpfTSKSESQSEGFSLRTLFSGLILGLSILTTY 464
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 484 SGQIVYGCAfllvllliilslvlaqWPSQVFSGDPVLTTVavlllllitgVMAIIWRQPQDPTPLHFKVPALPVLPLVSI 563
Cdd:TIGR00906 465 GRAAIAEEA----------------WSIALLTLFLVLFLL----------VVLTIWRQPQNKQKVAFKVPLVPFLPALSI 518
                         570       580       590
                  ....*....|....*....|....*....|....*....
gi 1387218110 564 FVNIYLLMQMNTGTWVLFGIWMVIGFAIYFGYGIRHSLE 602
Cdd:TIGR00906 519 LINIFLMVQLDADTWVRFAIWMAIGFLIYFLYGIRHSLE 557
PotE COG0531
Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];
23-431 1.04e-63

Serine transporter YbeC, amino acid:H+ symporter family [Amino acid transport and metabolism];


Pssm-ID: 440297 [Multi-domain]  Cd Length: 438  Bit Score: 216.69  E-value: 1.04e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  23 EGPEKRTARRLNTLDLIALGLGGTLGNGMYILVGEVSVYeAGPAIIICYLLAGLSTLLSGLCYAELAARVPRSGSVYLYS 102
Cdd:COG0531     3 RGESSELKRKLGLFDLVALGVGAIIGAGIFVLPGLAAGL-AGPAAILAWLIAGLLALLVALSYAELASAFPRAGGAYTYA 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 103 YVTMGQLCAFITGWNLILSYVMGTACVSRAWSAAFDSLIGNHISQAFQGTFslnvpYFLATYADFFalglvllltgllfl 182
Cdd:COG0531    82 RRALGPLLGFLAGWALLLSYVLAVAAVAVAFGGYLSSLFPAGGSVLIALVL-----ILLLTLLNLR-------------- 142
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 183 GARESTLVNKVFTGLNLLVLSFTILSGFIKGDPHNWKlteedyrlatsgssdtyslgplgsgGFLPF--GFEGILQGAAT 260
Cdd:COG0531   143 GVKESAKVNNILTVLKLLVLLLFIVVGLFAFDPANFT-------------------------PFLPAggGLSGVLAALAL 197
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 261 CVYAFVGFDVIATTGKEVQNPRRSIPLGIVITIFIGFLAYFGVSAALTLMVPYYQI-QPQSPLLQAFLHVGWNPARYVVA 339
Cdd:COG0531   198 AFFAFTGFEAIANLAEEAKNPKRNIPRAIILSLLIVGVLYILVSLALTGVVPYDELaASGAPLADAAEAVFGPWGAILIA 277
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 340 VGTLCALTSSLLGTMFTMPRLIYVMAEDGLLFRGLARLHGHRGTPIWAILVSG--MLAAVLALLLELIDLVYLVSIGTLL 417
Cdd:COG0531   278 LGALLSLLGALNASILGASRLLYAMARDGLLPKVFAKVHPRFGTPVNAILLTGviALLLLLLGAASFTALASLASVGVLL 357
                         410
                  ....*....|....
gi 1387218110 418 AYSLVAFSVLVLRY 431
Cdd:COG0531   358 AYLLVALAVIVLRR 371
AA_permease pfam00324
Amino acid permease;
58-391 8.52e-23

Amino acid permease;


Pssm-ID: 366028 [Multi-domain]  Cd Length: 467  Bit Score: 102.01  E-value: 8.52e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  58 VSVYEAGPA-IIICYLLAGLSTLLSGLCYAELAARVPRSGSVYLYSYVTMGQLCAFITGWNLILSYVMGtacvsrawsAA 136
Cdd:pfam00324  21 SVLGQAGPAgALLGYLISGVVIFLVMLSLGEISTNGPVSGGFYTYASRFLGPSLGFATGWNYWLSWITV---------LA 91
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 137 FDSLIGNHISQaFQGTFSlNVPYFLATYADFFALGLVLLLTGLLFLGARES-TLVNKVFTGLNLLVLSFTILSGFIKGDp 215
Cdd:pfam00324  92 LELTAASILIQ-FWELVP-DIPYLWVWGAVFLVLLTIINLVGVKWYGEAEFwFALIKIIAIIGFIIVGIILLSGGNPND- 168
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 216 hnwklteedyrlatsGSSDTYSLGPLGSGGFLPFGFEGILQGAATCVYAFVGFDVIATTGKEVQNPRRSIPLGIVITIFI 295
Cdd:pfam00324 169 ---------------GAIFRYLGDNGGKNNFPPGFGKGFISVFVIAFFAFTGIELVGIAAGEVKNPEKSIPKAILQVIWR 233
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 296 GFLAYFGVSAALTLMVPY-------YQIQPQSPLLQAFLHVGWNPARYVVAVGTLCALTSSLLGTMFTMPRLIYVMAEDG 368
Cdd:pfam00324 234 ITIFYILSLLAIGLLVPWndpgllnDSASAASPFVIFFKFLGISGLAPLINAVILTAALSAANSSLYSGSRMLYSLARDG 313
                         330       340
                  ....*....|....*....|...
gi 1387218110 369 LLFRGLARlHGHRGTPIWAILVS 391
Cdd:pfam00324 314 LAPKFLKK-VDKRGVPLRAILVS 335
AA_permease_C pfam13906
C-terminus of AA_permease; This is the C-terminus of AA-permease enzymes that is not captured ...
550-600 5.25e-22

C-terminus of AA_permease; This is the C-terminus of AA-permease enzymes that is not captured by the models pfam00324 and pfam13520.


Pssm-ID: 464034  Cd Length: 51  Bit Score: 89.18  E-value: 5.25e-22
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1387218110 550 FKVPALPVLPLVSIFVNIYLLMQMNTGTWVLFGIWMVIGFAIYFGYGIRHS 600
Cdd:pfam13906   1 FKVPLVPFLPALSILVNIYLMVQLDSLTWIRFGIWMLIGLLIYFGYGIRHS 51
AnsP COG1113
L-asparagine transporter or related permease [Amino acid transport and metabolism];
63-392 2.10e-21

L-asparagine transporter or related permease [Amino acid transport and metabolism];


Pssm-ID: 440730 [Multi-domain]  Cd Length: 458  Bit Score: 97.50  E-value: 2.10e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  63 AGPAIIICYLLAGLSTLLSGLCYAELAARVPRSGSVYLYSYVTMGQLCAFITGWNLILSYVMG-----TAC--------- 128
Cdd:COG1113    46 AGPAVLLSYLIAGLIVFLVMRALGEMAVANPVSGSFSDYAREYLGPWAGFVTGWLYWFFWVLVgmaeaTAVgiylqfwfp 125
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 129 -VSR-AWSAAFDSLIG--NHISQAFQGTFSlnvpYFLAtyadffalglvllltgllflgarestLVnKVFTGLNLLVL-S 203
Cdd:COG1113   126 dVPQwVWALVFLVLLTaiNLLSVKLFGEFE----FWFA--------------------------LI-KVVAIVAFIVVgL 174
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 204 FTILSGFikgdphnwklteedyrlaTSGSSDTYSLGPL-GSGGFLPFGFEGILQGAATCVYAFVGFDVIATTGKEVQNPR 282
Cdd:COG1113   175 LLIFFGF------------------GLPGGPPAGLSNLwDHGGFFPNGIGGVLAALQIVVFAFGGIELVGIAAAEAKDPE 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 283 RSIPL---GIVITIFIgFlaYFGVSAALTLMVPYYQIQP-QSPLLQAFLHVGWNPARYVVAVGTLCALTSSLLGTMFTMP 358
Cdd:COG1113   237 KTIPKainSVIWRILL-F--YVGSLFVILALVPWNQIGAgGSPFVTVFSLLGIPAAAGIMNFVVLTAALSSLNSGLYSTS 313
                         330       340       350
                  ....*....|....*....|....*....|....
gi 1387218110 359 RLIYVMAEDGLLFRGLARLhGHRGTPIWAILVSG 392
Cdd:COG1113   314 RMLYSLAERGDAPKFFGKL-SKRGVPVRAILLSA 346
AA_permease_2 pfam13520
Amino acid permease;
63-435 6.24e-18

Amino acid permease;


Pssm-ID: 404414 [Multi-domain]  Cd Length: 427  Bit Score: 86.60  E-value: 6.24e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  63 AGPAIIICYLLAGLSTLLSG-LCYAELAARVPRSGSVYLYSYVTMGQLCAFITGWNLILSYVMGTACVSrawSAAFDSLI 141
Cdd:pfam13520  28 GGPALIVWGWIAAIIFSLAVgLVYAELSSALPRSGGIYVYLENAFGKFVAFLAGWSNWFAYVLGLASSA---SVAASYLL 104
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 142 GnhisqAFQGTFSLNVPYFLATYADFFAlglvlLLTGLLFLGARESTLVNKVFTGLNLLV-LSFTILSGFIKGDPHnwkl 220
Cdd:pfam13520 105 S-----ALGPDLVPTTWLTYGIAIAILI-----IFAIINIRGVRESAKIQNILGILKLLLpLILIIILGLVTADGG---- 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 221 teedyrlatsgssdTYSLGPLGSGGFLPFGFEGILQGAATCVYAFVGFDVIATTGKEVqnPRRSIPLGIVITIFIGFLAY 300
Cdd:pfam13520 171 --------------GFNLLSGEWHTFFPDGWPGVFAGFLGVLWSFTGFESAANVSEEV--KKRNVPKAIFIGVIIVGVLY 234
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 301 FGVSAALTLMVPYYQIQPQSPLLQ----AFLHVGWNPARYVVAVGTLCALTSSLLGTMFTMPRLIYVMAEDGLL--FRGL 374
Cdd:pfam13520 235 ILVNIAFFGVVPDDEIALSSGLGQvaalLFQAVGGKWGAIIVVILLALSLLGAVNTAIVGASRLLYALARDGVLpfSRFF 314
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1387218110 375 ARLHgHRGTPIWAILVSGMLAAVLALLLELIDLVY-----LVSIGTLLAYSLVAFSVLVLRYQPEQ 435
Cdd:pfam13520 315 AKVN-KFGSPIRAIILTAILSLILLLLFLLSPAAYnallsLSAYGYLLSYLLPIIGLLILRKKRPD 379
2A0308 TIGR00911
L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and ...
68-436 2.08e-15

L-type amino acid transporter; [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273332 [Multi-domain]  Cd Length: 501  Bit Score: 79.41  E-value: 2.08e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  68 IICYLLAGLSTLLSGLCYAELAARVPRSGSVYLYSYVTMGQLCAFITGWnlILSYVMGTAcvsrawSAAFDSLI-GNHIS 146
Cdd:TIGR00911  80 LIMWAVCGIFSIVGALVYAELGTTIPKSGGEYNYILEVFGPLLAFLRLW--IELLVIRPG------SQAVNALNfAIYIL 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 147 QAFqgtFSLNVPYFLAtyADFFALGLVLLLTGLLFLGARESTLVNKVFTGLNLLVLSFTILSGFI---KGDPHNWkltee 223
Cdd:TIGR00911 152 TPV---FPDCEVPEWA--IRLVAVLCVLLLTLVNCLSVKWATRVQDIFTACKLLALLLIIITGWVqlgKGGVESL----- 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 224 DYRLATSGSSDTYSLGPLGsggflpfgfegILQGaatcVYAFVGFDVIATTGKEVQNPRRSIPLGIVITIFIGFLAYFGV 303
Cdd:TIGR00911 222 NPKNAFEGTETSAGGIVLA-----------FYSG----IWAYGGWNYLNFVTEEVKNPYRTLPIAIIISMPIVTFIYVLT 286
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 304 SAALTLMVPYYQIQPQSPLLQAFLHVGWNPARYVVAVGTLCALTSSLLGTMFTMPRLIYVMAEDGLLFRGLARLHGHRGT 383
Cdd:TIGR00911 287 NIAYFTVLSPEELLASLAVAVDFGERLLGVMSWAMPALVGLSCFGSVNGSLFSSSRLFFVGGREGHLPSLLSMIHVKRLT 366
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1387218110 384 PIWAILVSGMLAAVLALLLELIDLVYLVSIGTLLAYSLVAFSVLVLRYQ-PEQN 436
Cdd:TIGR00911 367 PLPSLLIVCTLTLLMLFSGDIYSLINLISFANWLFNALAVAGLLWLRYKrPEMN 420
LysP COG0833
Amino acid permease [Amino acid transport and metabolism];
59-391 1.18e-14

Amino acid permease [Amino acid transport and metabolism];


Pssm-ID: 440595 [Multi-domain]  Cd Length: 467  Bit Score: 76.75  E-value: 1.18e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  59 SVYEAGP-AIIICYLLAGLSTLLSGLCYAELAARVPRSGSVYLYSYVTMGQLCAFITGWNLILSYV--MGTACVSRA--- 132
Cdd:COG0833    39 TISQAGPgGALLAYLLGGLMVYFLMTSLGELAVAMPVSGSFQTYATRFIDPAFGFAVGWNYWLNWAitVAAELTAAGiim 118
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 133 -----------WSAAFDSLIgnhisqafqgtFSLNvpyflATYADFFAlglvllltgllflgarES----TLVnKVFTGL 197
Cdd:COG0833   119 qywfpdvpvwiWSLLFLALI-----------FLLN-----ALSVKAFG----------------ESefwfSLI-KVITVI 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 198 NLLVLSFTILSGFIKGDP---HNWKlteedyrlatsgssdtyslgplGSGGFLPFGFEGILQGAATCVYAFVGFDVIATT 274
Cdd:COG0833   166 AFIIVGLLMIFGIIGGHApgfSNFT----------------------TGDGPFPGGFLAILGVMMIVGFSFQGTELIGIA 223
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 275 GKEVQNPRRSIPLGIViTIFIGFLAYFGVS-AALTLMVPYYqiQP---QSPLLQAFLHVGWNPARYVVAVGTLCALTSSL 350
Cdd:COG0833   224 AGESENPEKTIPKAIR-QVFWRILLFYILAiFVIAALIPYT--DAgvaESPFTLVFERAGIPYAADIMNAVILTAVLSAG 300
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1387218110 351 LGTMFTMPRLIYVMAEDGLLFRGLARLHgHRGTPIWAILVS 391
Cdd:COG0833   301 NSGLYASTRMLWSLAKEGMAPKIFAKLN-KRGVPLNALLAT 340
PRK10238 PRK10238
aromatic amino acid transporter AroP;
53-393 1.09e-13

aromatic amino acid transporter AroP;


Pssm-ID: 182324 [Multi-domain]  Cd Length: 456  Bit Score: 73.45  E-value: 1.09e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  53 ILVGEVSVYE-AGPAIIICYLLAGLSTLLSGLCYAELAARVPRSGSVYLYSYVTMGQLCAFITGWNLILSYVMgtacVSR 131
Cdd:PRK10238   32 LFLGSASVIQsAGPGIILGYAIAGFIAFLIMRQLGEMVVEEPVAGSFSHFAYKYWGSFAGFASGWNYWVLYVL----VAM 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 132 AWSAAfdslIGNHISQAFQgtfslNVPYFlATYADFFALGLVLLLTGLLFLGARESTlvnkvFTGLNLLVLSFTILSGfi 211
Cdd:PRK10238  108 AELTA----VGKYIQFWYP-----EIPTW-VSAAVFFVVINAINLTNVKVFGEMEFW-----FAIIKVIAVVAMIIFG-- 170
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 212 kgdphNWKLteedyrLATSGSSDTYSLGPLGSGGFLPFGFEGILQGAATCVYAFVGFDVIATTGKEVQNPRRSIPLGIVI 291
Cdd:PRK10238  171 -----GWLL------FSGNGGPQATVSNLWDQGGFLPHGFTGLVMMMAIIMFSFGGLELVGITAAEADNPEQSIPKATNQ 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 292 TIFIGFLAYFGVSAALTLMVPYYQIQPQ-SPLLQAFLHVGWNPARYVVAVGTLCALTSSLLGTMFTMPRLIYVMAEDGLL 370
Cdd:PRK10238  240 VIYRILIFYIGSLAVLLSLMPWTRVTADtSPFVLIFHELGDTFVANALNIVVLTAALSVYNSCVYCNSRMLFGLAQQGNA 319
                         330       340
                  ....*....|....*....|...
gi 1387218110 371 FRGLARLHgHRGTPIWAILVSGM 393
Cdd:PRK10238  320 PKALASVD-KRGVPVNTILVSAL 341
frlA PRK11357
amino acid permease;
31-392 1.61e-12

amino acid permease;


Pssm-ID: 183096 [Multi-domain]  Cd Length: 445  Bit Score: 69.88  E-value: 1.61e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  31 RRLNTLDLIALGLGGTLGNGMYILVGEVSVYEAGPAI-IICYLLAGLSTLLSGLCYAELAARVPRSGSVYLYSYVTMGQL 109
Cdd:PRK11357    8 RKLGFWAVLAIAVGTTVGSGIFVSVGEVAKAAGTPWLtVLAFVIGGLIVIPQMCVYAELSTAYPENGADYVYLKNAGSRP 87
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 110 CAFITGWNLILS------YVMGTACVSR-AWSAAFDSLIGNHISQAFQGTFSLnvpyflatyadffalglvlLLTGLLFL 182
Cdd:PRK11357   88 LAFLSGWASFWAndapslSIMALAIVSNlGFLTPIDPLLGKFIAAGLIIAFML-------------------LHLRSVEG 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 183 GARESTLVNKvftglnLLVLSFTILSG----FIKGDphnwklteedyrlaTSGSSDTYSLGPLGsggflpfGFEGILQGA 258
Cdd:PRK11357  149 GAAFQTLITI------AKIIPFTIVIGlgifWFKAE--------------NFAAPTTTAIGATG-------SFMALLAGI 201
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 259 ATCVYAFVGFDVIATTGKEVQNPRRSIPLGIVITIFIGFLAYFGVSAALTLMVPYYQIQ-PQSPLLQAFLHVG--WNPAR 335
Cdd:PRK11357  202 SATSWSYTGMASICYMTGEIKNPGKTMPRALIGSCLLVLVLYTLLALVISGLMPFDKLAnSETPISDALTWIPalGSTAG 281
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1387218110 336 YVVAVGTLCALTSSLLGTMFTMPRLIYVMAEDGLLFRGLARLHGHRGTPIWAILVSG 392
Cdd:PRK11357  282 IFVAITAMIVILGSLSSCVMYQPRLEYAMAKDNLFFKCFGHVHPKYNTPDVSIILQG 338
PRK10249 PRK10249
phenylalanine transporter; Provisional
63-392 3.74e-11

phenylalanine transporter; Provisional


Pssm-ID: 236667  Cd Length: 458  Bit Score: 65.78  E-value: 3.74e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  63 AGPAIIICYLLAGLSTLLSGLCYAELAARVPRSGSVYLYSYVTMGQLCAFITGWNLILSYVM-GTACVSRAwsaafdsli 141
Cdd:PRK10249   52 AGPAVLLGYGVAGIIAFLIMRQLGEMVVEEPVSGSFAHFAYKYWGPFAGFLSGWNYWVMFVLvGMAELTAA--------- 122
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 142 GNHISQAFQgtfslNVPYFLATYADFFALGLVLLLTGLLFLGARESTLVNKVFTGLNLLVLSFTILSGFIKGDPHN---- 217
Cdd:PRK10249  123 GIYMQYWFP-----DVPTWIWAAAFFIIINAVNLVNVRLYGETEFWFALIKVLAIIGMIGFGLWLLFSGHGGEKASidnl 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 218 WKlteedyrlatsgssdtyslgplgSGGFLPFGFEGILQGAATCVYAFVGFDVIATTGKEVQNPRRSIPLGIVITIFIGF 297
Cdd:PRK10249  198 WR-----------------------YGGFFATGWNGLILSLAVIMFSFGGLELIGITAAEARDPEKSIPKAVNQVVYRIL 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 298 LAYFGVSAALTLMVPYYQIQP-QSPLLQAFLHVGWNPARYVVAVGTLCALTSSLLGTMFTMPRLIYVMAEDGLLFRGLAR 376
Cdd:PRK10249  255 LFYIGSLVVLLALYPWVEVKSnSSPFVMIFHNLDSNVVASALNFVILVASLSVYNSGVYSNSRMLFGLSVQGNAPKFLTR 334
                         330
                  ....*....|....*.
gi 1387218110 377 LhGHRGTPIWAILVSG 392
Cdd:PRK10249  335 V-SRRGVPINSLMLSG 349
PRK11049 PRK11049
D-alanine/D-serine/glycine permease; Provisional
229-377 1.27e-09

D-alanine/D-serine/glycine permease; Provisional


Pssm-ID: 236830  Cd Length: 469  Bit Score: 60.90  E-value: 1.27e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 229 TSGSSDTYSLGPL-GSGGFLPFGFEGILQGAATCVYAFVGFDVIATTGKEVQNPRRSIPLGI-VITIFIgflAYFGVSAA 306
Cdd:PRK11049  187 QSPTGVEASFAHLwNDGGMFPKGLSGFFAGFQIAVFAFVGIELVGTTAAETKDPEKSLPRAInSIPIRI---IMFYVFAL 263
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1387218110 307 LTLM--VPYYQIQP-QSPLLQAFLHVGWNPARYVVAVGTLCALTSSLLGTMFTMPRLIYVMAEDGLLFRGLARL 377
Cdd:PRK11049  264 IVIMsvTPWSSVVPdKSPFVELFVLVGLPAAASVINFVVLTSAASSANSGVFSTSRMLFGLAQEGVAPKAFAKL 337
PRK11387 PRK11387
S-methylmethionine permease;
241-391 2.60e-07

S-methylmethionine permease;


Pssm-ID: 236904  Cd Length: 471  Bit Score: 53.32  E-value: 2.60e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 241 LGSGGFLPFGFEGILQGAATCVYAFVGFDVIATTGKEVQNPRRSIPLGIVITIFIGFLAYFGVSAALTLMVPYYQIQ-PQ 319
Cdd:PRK11387  195 LTAEGWFPHGGLPILMTMVAVNFAFSGTELIGIAAGETENPAKVIPVAIRTTIARLVIFFVGTVLVLAALIPMQQAGvEK 274
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1387218110 320 SPLLQAFLHVGWNPARYVVAVGTLCALTSSLLGTMFTMPRLIYVMAEDGLLFRGLARLHGhRGTPIWAILVS 391
Cdd:PRK11387  275 SPFVLVFEKVGIPYAADIFNFVILTAILSAANSGLYASGRMLWSLSNEGTLPACFARLTK-RGIPLTALSVS 345
PRK15049 PRK15049
L-asparagine permease;
63-377 1.12e-06

L-asparagine permease;


Pssm-ID: 185009  Cd Length: 499  Bit Score: 51.54  E-value: 1.12e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  63 AGPAIIICYLLAGLSTLLSGLCYAELAARVPRSGSVYLYSYVTMGQLCAFITGWNLILSYVMgTACVSRAWSAAFdslig 142
Cdd:PRK15049   59 AGPALALVYLICGLFSFFILRALGELVLHRPSSGSFVSYAREFLGEKAAYVAGWMYFINWAM-TGIVDITAVALY----- 132
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 143 NHISQAFQGtfslnVPYFLatyadfFALGLVLLLTGLLFLGARESTLVNKVFTGLNLLVLSFTILSGFI---KGDPHNWK 219
Cdd:PRK15049  133 MHYWGAFGG-----VPQWV------FALAALTIVGTMNMIGVKWFAEMEFWFALIKVLAIVTFLVVGTVflgSGQPLDGN 201
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 220 LTeeDYRLATSgssdtyslgplgSGGFLPFGFEGILQGAATCVYAFVGFDVIATTGKEVQNPRRSIPLGIVITIFIGFLA 299
Cdd:PRK15049  202 TT--GFHLITD------------NGGFFPHGLLPALVLIQGVVFAFASIEMVGTAAGECKDPQTMVPKAINSVIWRIGLF 267
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1387218110 300 YFGVSAALTLMVPYYQIQP-QSPLLQAFLHVGWNPARYVVAVGTLCALTSSLLGTMFTMPRLIYVMAEDGLLFRGLARL 377
Cdd:PRK15049  268 YVGSVVLLVMLLPWSAYQAgQSPFVTFFSKLGVPYIGSIMNIVVLTAALSSLNSGLYCTGRILRSMAMGGSAPSFMAKM 346
PRK10197 PRK10197
GABA permease;
58-391 2.89e-06

GABA permease;


Pssm-ID: 182297  Cd Length: 446  Bit Score: 50.01  E-value: 2.89e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  58 VSVYEAGPAIIICYLLAGLSTLLSGLCYAELAARVPRSGSVYLYSYVTMGQLCAFITGWNLILSYVMGTACVSRAWSAAF 137
Cdd:PRK10197   18 VAIAEAGPAVLLAYLFAGLLVVMIMRMLAEMAVATPDTGSFSTYADKAIGRWAGYTIGWLYWWFWVLVIPLEANIAAMIL 97
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 138 DSLIGnhisqafqgtfslNVPYFLATYADFFALGLVLLLTGLLFLGARESTLVNKVFTGLNLLVLSFTILSGFikgdphn 217
Cdd:PRK10197   98 HSWVP-------------GIPIWLFSLVITLALTGSNLLSVKNYGEFEFWLALCKVIAILAFIFLGAVAISGF------- 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 218 wklteedYRLA-TSGSSDTYSlgplgSGGFLPFGFEGILQGAATCVYAFVGFDVIATTGKEVQNPRRSIPLG---IVITI 293
Cdd:PRK10197  158 -------YPYAeVSGISRLWD-----SGGFMPNGFGAVLSAMLITMFSFMGAEIVTIAAAESDTPEKHIVRAtnsVIWRI 225
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 294 FIGFL-AYFGVSAALTLMVPYYQIQPQSPLLQAFLHVGWnpARYVVAVGTLCALTSSLLGTMFTMPRLIYVMAEDGLLFR 372
Cdd:PRK10197  226 SIFYLcSIFVVVALIPWNMPGLKAVGSYRSVLELLNIPH--AKLIMDCVILLSVTSCLNSALYTASRMLYSLSRRGDAPA 303
                         330
                  ....*....|....*....
gi 1387218110 373 GLARLHGHRgTPIWAILVS 391
Cdd:PRK10197  304 VMGKINRSK-TPYVAVLLS 321
proY PRK10580
putative proline-specific permease; Provisional
243-390 3.49e-06

putative proline-specific permease; Provisional


Pssm-ID: 182566 [Multi-domain]  Cd Length: 457  Bit Score: 49.82  E-value: 3.49e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 243 SGGFLPFGFEGILQGAATCVYAFVGFDVIATTGKEVQNPRRSIPLGIVITIFIGFLAYFGVSAALTLMVPYYQIQPQ-SP 321
Cdd:PRK10580  190 NGGFFSNGWLGMVMSLQMVMFAYGGIEIIGITAGEAKDPEKSIPRAINSVPMRILVFYVGTLFVIMSIYPWNQVGTNgSP 269
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1387218110 322 LLQAFLHVGWNPARYVVAVGTLCALTSSLLGTMFTMPRLIYVMAEDGLLFRGLARLhGHRGTPIWAILV 390
Cdd:PRK10580  270 FVLTFQHMGITFAASILNFVVLTASLSAINSDVFGVGRMLHGMAEQGSAPKIFSKT-SRRGIPWVTVLV 337
2A0310 TIGR00913
amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]
251-392 6.29e-06

amino acid permease (yeast); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273334  Cd Length: 478  Bit Score: 49.20  E-value: 6.29e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 251 FEGILQGAATCVYAFVGFDVIATTGKEVQNPRRSIPLGIVITIFIGFLAYFGVSAALTLMVPYYQIQpqspLLQAFLHVG 330
Cdd:TIGR00913 196 FKGVCSVFVTAAFSFGGTELVALTAGEAANPRKSIPRAAKRTFWRILVFYILTLFLIGFLVPYNDPR----LLSSSSSSD 271
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1387218110 331 WNPARYVVAVGT--------------LCALTSSLLGTMFTMPRLIYVMAEDGLLFRGLARLHgHRGTPIWAILVSG 392
Cdd:TIGR00913 272 SAASPFVIAIQNhgikvlphifnaviLISVLSAANSSLYASSRTLYALAHQGLAPKIFAYVD-RRGVPYVAVIVSS 346
2A0304 TIGR00907
amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides ...
65-391 6.93e-06

amino acid permease (GABA permease); [Transport and binding proteins, Amino acids, peptides and amines]


Pssm-ID: 273331 [Multi-domain]  Cd Length: 482  Bit Score: 48.97  E-value: 6.93e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110  65 PAIIICYLLAGLSTLLSGLCYAELAARVPRSGSVYLYSYVTMGQ----LCAFITGWNLILSYVMGTAcvSRAWSAAfdsl 140
Cdd:TIGR00907  47 MSIVWGWIIAGAGSICIALSLAELSSAYPTSGGQYFWSAKLAPPrqmpFASWMTGWFNLAGQVAGTA--STDLSVA---- 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 141 ignhisQAFQGTFSLNVPYFLATYADFFALGLVLLLTGLLFLGARESTLV-------NKVFTGLNLLVLSFTILSgFIKG 213
Cdd:TIGR00907 121 ------QLILGIVSLTTPGREYIPTRWHIFGIMIGIHLIHALINSLPTKWlpritssAAYWSLLGFLTICITLLA-CKSP 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 214 DPHNWKLTEEDYRLATsgssdtyslgplgsGGFLPFGFE---GILQGAatcvYAFVGFDVIATTGKEVQNPRRSIPLGIV 290
Cdd:TIGR00907 194 KFNDGKFVFTNFNNST--------------GGWKPGGFAfllGLLNPA----WSMTGYDGTAHMAEEIENPEVVGPRAII 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 291 ITIFIGFLAYFGVSAALTLMVPYYQIQPQSPLLQAFL---HVGWNPARYVVAVGTLCALTSSLLGT--MFTMPRLIYVMA 365
Cdd:TIGR00907 256 GAVAIGIVTGFCFNIVLFFSMGDIDSLISSTTGQPIAqifYNALGNKAGAIFLLCLILVTSFFCAItcMTANSRMIYAFS 335
                         330       340
                  ....*....|....*....|....*...
gi 1387218110 366 EDGLL--FRGLARLHGHRGTPIWAILVS 391
Cdd:TIGR00907 336 RDGGLpfSPLWSRVNPRTQVPLNAVWLS 363
PRK10746 PRK10746
putative transport protein YifK; Provisional
244-391 1.63e-03

putative transport protein YifK; Provisional


Pssm-ID: 182694  Cd Length: 461  Bit Score: 41.34  E-value: 1.63e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1387218110 244 GGFLPFGFEGILQGAATCVYAFVGFDVIATTGKEVQNPRRSIPLGIVITIFIGFLAYFGVSAALTLMVPYYQIQPQ-SPL 322
Cdd:PRK10746  192 GGFFAGGWKGFLTALCIVVASYQGVELIGITAGEAKNPQVTLRSAVGKVLWRILIFYVGAIFVIVTIFPWNEIGSNgSPF 271
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1387218110 323 LQAFLHVGWNPARYVVAVGTLCALTSSLLGTMFTMPRLIYVMAEDGLLFRGLARLHGHrGTPIWAILVS 391
Cdd:PRK10746  272 VLTFAKIGITAAAGIINFVVLTAALSGCNSGMYSCGRMLYALAKNRQLPAAMAKVSRH-GVPVAGVAVS 339
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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