|
Name |
Accession |
Description |
Interval |
E-value |
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
28-737 |
0e+00 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 956.09 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 28 LGGDSTFFKSFNKCTEDDFEFPFAKTNLSKNGENIDSDPALQKVNFLPVLEQVGNS-DCHYQEGLKDSDLE--------- 97
Cdd:pfam05483 1 AGGDSNFFKSFNKCTEDDFEFPFAKSNLSKNGENIDSDPAFQKLNFLPMLEQVANSgDCHYQEGLKDSDFEnseglsrly 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 98 ----------------------------------------------FGNEKVSLKLEEGIQENKDLIKENNATRHLCNLL 131
Cdd:pfam05483 81 sklykeaekikkwkvsieaelkqkenklqenrkiieaqrkaiqelqFENEKVSLKLEEEIQENKDLIKENNATRHLCNLL 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 132 KETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRVQAENSRLEMHFKLKEDYEKIQHLEQEYKKEINDKEK 211
Cdd:pfam05483 161 KETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEK 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 212 QVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQ 291
Cdd:pfam05483 241 QVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQ 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 292 IATKTICQLTEEKETQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLT 371
Cdd:pfam05483 321 IATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFK 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 372 NNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQELIGLLQAREKEVHDLEIQLTAITTSEQYYSKEVKDLKTEL 451
Cdd:pfam05483 401 NNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTEL 480
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 452 ENEKLKNTELTSHCNKLSLENKELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQK 531
Cdd:pfam05483 481 EKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQK 560
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 532 RDEVKCKLDKSEEN---------------------CNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNK 590
Cdd:pfam05483 561 GDEVKCKLDKSEENarsieyevlkkekqmkilenkCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNK 640
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 591 LELELESAKQKFGEITDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKII 670
Cdd:pfam05483 641 LELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKII 720
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 530363232 671 EERDSELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKREAKENTATLKEKK 737
Cdd:pfam05483 721 EERDSELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKENTAILKDKK 787
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
187-739 |
4.09e-13 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 73.56 E-value: 4.09e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 187 KLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEkTKLQSENLKQSIEKQHHLT 266
Cdd:PRK03918 176 RRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEE-LKEEIEELEKELESLEGSK 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 267 KELEDIKVSLQRSVSTQKALEEDLQIATKTICQLtEEKETQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEkn 346
Cdd:PRK03918 255 RKLEEKIRELEERIEELKKEIEELEEKVKELKEL-KEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIK-- 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 347 edqlkiltmELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKG-TEQELIGLLQAREKEVHD 425
Cdd:PRK03918 332 ---------ELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGlTPEKLEKELEELEKAKEE 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 426 LEIQLTAITTSEQYYSKEVKDLKTELEneklkntELTSHCNKLSLENKELTQE-----TSDMTLELKNQQEDINNNKKQE 500
Cdd:PRK03918 403 IEEEISKITARIGELKKEIKELKKAIE-------ELKKAKGKCPVCGRELTEEhrkelLEEYTAELKRIEKELKEIEEKE 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 501 ERM---LKQIENLQETETQLRNELEyVREELKQKRDEVK-CKLDKSEENCNNLRKQVENKNKYIEELQQENKALKKKGTA 576
Cdd:PRK03918 476 RKLrkeLRELEKVLKKESELIKLKE-LAEQLKELEEKLKkYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEEL 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 577 ESKqLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIdKRCQHKIAEMV 656
Cdd:PRK03918 555 KKK-LAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKEL-KKLEEELDKAF 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 657 ALMEKHKHQYDKIIEERDSELGLYKSKEQEQ-SSLRASLEIELSNLKAELlsvkKQLEIEREEKEKLKREAKENTATLKE 735
Cdd:PRK03918 633 EELAETEKRLEELRKELEELEKKYSEEEYEElREEYLELSRELAGLRAEL----EELEKRREEIKKTLEKLKEELEEREK 708
|
....
gi 530363232 736 KKDK 739
Cdd:PRK03918 709 AKKE 712
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
76-662 |
5.98e-13 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 73.23 E-value: 5.98e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 76 VLEQVGNSDCHYQEGLkdSDLEFGNEKVSLKLEEGIQENKDLIKEnnatrhlcnLLKETCARSAEKTKKyEYEREETRQV 155
Cdd:pfam15921 304 IQEQARNQNSMYMRQL--SDLESTVSQLRSELREAKRMYEDKIEE---------LEKQLVLANSELTEA-RTERDQFSQE 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 156 YMDLNNNIEKMITafeelrvqaensrlEMHFKLKEdyekiQHLEQEYKKEINDKEKQVSL----LLIQITEKENKMKDLT 231
Cdd:pfam15921 372 SGNLDDQLQKLLA--------------DLHKREKE-----LSLEKEQNKRLWDRDTGNSItidhLRRELDDRNMEVQRLE 432
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 232 FLLEESRDKVNQLEEKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTeekeTQMEES 311
Cdd:pfam15921 433 ALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLT----ASLQEK 508
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 312 NKARAAHSFVVTEFETTVcsleELLRTEQQRLEKNEDQLKiltmelqkksseleemtkltnNKEVELEELKKVLGEKETL 391
Cdd:pfam15921 509 ERAIEATNAEITKLRSRV----DLKLQELQHLKNEGDHLR---------------------NVQTECEALKLQMAEKDKV 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 392 LYENKQFEKIAEELKGTEQELIGLLQAR----EKEVHDLEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNK 467
Cdd:pfam15921 564 IEILRQQIENMTQLVGQHGRTAGAMQVEkaqlEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSE 643
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 468 LSLENKELTQETSDMTLELKNQQEDINNNKKQEERMLKQIEN----LQETETQLRNELEYVREELKQKRDEVKcKLDKSE 543
Cdd:pfam15921 644 RLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNkseeMETTTNKLKMQLKSAQSELEQTRNTLK-SMEGSD 722
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 544 ENCNN----LRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEITDtyqkEIEDKKIS 619
Cdd:pfam15921 723 GHAMKvamgMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAG----ELEVLRSQ 798
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 530363232 620 EENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKH 662
Cdd:pfam15921 799 ERRLKEKVANMEVALDKASLQFAECQDIIQRQEQESVRLKLQH 841
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
131-530 |
1.42e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 72.01 E-value: 1.42e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 131 LKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRVQAENsrlemhfkLKEDYEKIQHLEQEYKKEINDKE 210
Cdd:TIGR02168 682 LEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISA--------LRKDLARLEAEVEQLEERIAQLS 753
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 211 KQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDL 290
Cdd:TIGR02168 754 KELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRI 833
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 291 QIATKTICQLTEEKETQMEEsnkaraahsfvvtefettVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKL 370
Cdd:TIGR02168 834 AATERRLEDLEEQIEELSED------------------IESLAAEIEELEELIEELESELEALLNERASLEEALALLRSE 895
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 371 TNNKEVELEELKKVLGEKETLLYE-NKQFEKIAEELKGTEQELIGLL-QAREKEVHDLEIQLT---AITTSEQYYSKEVK 445
Cdd:TIGR02168 896 LEELSEELRELESKRSELRRELEElREKLAQLELRLEGLEVRIDNLQeRLSEEYSLTLEEAEAlenKIEDDEEEARRRLK 975
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 446 DLKTELENekLKNTeltshcNKLSLENKELTQETSDmtlELKNQQEDINNNKKQEERMLKQIEnlQETETQLRNELEYVR 525
Cdd:TIGR02168 976 RLENKIKE--LGPV------NLAAIEEYEELKERYD---FLTAQKEDLTEAKETLEEAIEEID--REARERFKDTFDQVN 1042
|
....*
gi 530363232 526 EELKQ 530
Cdd:TIGR02168 1043 ENFQR 1047
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
396-697 |
7.40e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.58 E-value: 7.40e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 396 KQFEKIAEELKGTEQELIGL-LQAREKEVHDLEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKE 474
Cdd:COG1196 213 ERYRELKEELKELEAELLLLkLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYE 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 475 LTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELeyvrEELKQKRDEVKCKLDKSEENCNNLRKQVE 554
Cdd:COG1196 293 LLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEEL----EELEEELEEAEEELEEAEAELAEAEEALL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 555 NKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQkfgeitdtyqkEIEDKKISEENLLEEVEKAKVIA 634
Cdd:COG1196 369 EAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLE-----------RLERLEEELEELEEALAELEEEE 437
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 530363232 635 DEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKSKEQEQSSLRASLEIE 697
Cdd:COG1196 438 EEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAE 500
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
403-713 |
9.72e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 69.32 E-value: 9.72e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 403 EELKGTEQELIGLLQAREKEVHDLEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDM 482
Cdd:TIGR02168 680 EELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTEL 759
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 483 TLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEV---KCKLDKSEENCNNLRKQVENKNKY 559
Cdd:TIGR02168 760 EAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELtllNEEAANLRERLESLERRIAATERR 839
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 560 IEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAkqkfgeiTDTYQKEIEDKKISEENLLEEVEKAKVIADEAVK 639
Cdd:TIGR02168 840 LEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAL-------LNERASLEEALALLRSELEELSEELRELESKRSE 912
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 530363232 640 LQKEIDkRCQHKIAEMVALMEKHKHQYDKIIEERDSElglYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLE 713
Cdd:TIGR02168 913 LRRELE-ELREKLAQLELRLEGLEVRIDNLQERLSEE---YSLTLEEAEALENKIEDDEEEARRRLKRLENKIK 982
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
200-747 |
2.68e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.65 E-value: 2.68e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 200 QEYKKEIndKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRS 279
Cdd:COG1196 216 RELKEEL--KELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYEL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 280 VSTQKALEEDLQIATKTICQLTEEKETQMEESNKARAAHSFVVTEFETtvcsLEELLRTEQQRLEKNEDQLKILTMELQK 359
Cdd:COG1196 294 LAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEE----LEEELEEAEEELEEAEAELAEAEEALLE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 360 KSSELEEmtkltnnkevELEELKKVLGEKETLLYENKQFEKIAEELKGTEQELIGLLQAREKEVHDLEIQLTAITTSEQY 439
Cdd:COG1196 370 AEAELAE----------AEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEE 439
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 440 YSKEVKDLKTELENEKLKNTELTshcnKLSLENKELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQET--ETQL 517
Cdd:COG1196 440 EEEALEEAAEEEAELEEEEEALL----ELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGvkAALL 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 518 RNELEYVREELKQKRDEVKCKLDKSEENCNNLRKQVENKNKYIEELQQENKALKKKGTAEskqlnvyeikvnklELELES 597
Cdd:COG1196 516 LAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRAT--------------FLPLDK 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 598 AKQKFGEITDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHK--HQYDKIIEERDS 675
Cdd:COG1196 582 IRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLRevTLEGEGGSAGGS 661
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 530363232 676 ELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKREAKENTATLKEKKDKKTQTFLLE 747
Cdd:COG1196 662 LTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAE 733
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
107-736 |
1.29e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.46 E-value: 1.29e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 107 LEEGIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRVQAENSRLEMHF 186
Cdd:TIGR02168 237 LREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLER 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 187 KLKEDYEKIQHLEQ---EYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKLQSENLKQSIEKQH 263
Cdd:TIGR02168 317 QLEELEAQLEELESkldELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIA 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 264 HLTKELEDIKVSLQRSVSTQKALEEDLQIATKTIcQLTEEKETQMEESNKARAAHsfvvtEFETTVCSLEELLRTEQQRL 343
Cdd:TIGR02168 397 SLNNEIERLEARLERLEDRRERLQQEIEELLKKL-EEAELKELQAELEELEEELE-----ELQEELERLEEALEELREEL 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 344 EKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEK------------------------ETLLYENKQ-- 397
Cdd:TIGR02168 471 EEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQsglsgilgvlselisvdegyeaaiEAALGGRLQav 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 398 --------------------------------------------------------FEKIAEELKGTEQELIGLL----- 416
Cdd:TIGR02168 551 vvenlnaakkaiaflkqnelgrvtflpldsikgteiqgndreilkniegflgvakdLVKFDPKLRKALSYLLGGVlvvdd 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 417 ------------------------------------------QAREKEVHDLEIQLTAITTSEQYYSKEVKDLKTELEne 454
Cdd:TIGR02168 631 ldnalelakklrpgyrivtldgdlvrpggvitggsaktnssiLERRREIEELEEKIEELEEKIAELEKALAELRKELE-- 708
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 455 klknteltshcnklslenkELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELeyvrEELKQKRDE 534
Cdd:TIGR02168 709 -------------------ELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKEL----TELEAEIEE 765
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 535 VKCKLDKSEENCNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESakqkfgeitdtYQKEIE 614
Cdd:TIGR02168 766 LEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLES-----------LERRIA 834
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 615 DKKISEENLleeVEKAKVIADEAVKLQKEIDKrCQHKIAEMVALMEKHKHQYDKIIEERDselgLYKSKEQEQSSLRASL 694
Cdd:TIGR02168 835 ATERRLEDL---EEQIEELSEDIESLAAEIEE-LEELIEELESELEALLNERASLEEALA----LLRSELEELSEELREL 906
|
730 740 750 760
....*....|....*....|....*....|....*....|..
gi 530363232 695 EIELSNLKAELLSVKKQLEIEREEKEKLKREAKENTATLKEK 736
Cdd:TIGR02168 907 ESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEE 948
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
144-739 |
1.83e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.08 E-value: 1.83e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 144 KYEYEREETRQVYMDLNNNIEKMITAFEELRVQAEN-----SRLEMHFKLKEDYEKIQHL-----EQEYKKEINDKEKQV 213
Cdd:TIGR02168 169 KYKERRKETERKLERTRENLDRLEDILNELERQLKSlerqaEKAERYKELKAELRELELAllvlrLEELREELEELQEEL 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 214 SLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQ-- 291
Cdd:TIGR02168 249 KEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEel 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 292 -----IATKTICQLTEEKETQMEESNKARAAHS---FVVTEFETTVCSLEELLRTEQQ--------------RLEKNEDQ 349
Cdd:TIGR02168 329 eskldELAEELAELEEKLEELKEELESLEAELEeleAELEELESRLEELEEQLETLRSkvaqlelqiaslnnEIERLEAR 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 350 LKILTMELQKKSSELEEMtkLTNNKEVELEELKKVLGEKETLLYE-NKQFEKIAEELKGTEQELIGLLQAR---EKEVHD 425
Cdd:TIGR02168 409 LERLEDRRERLQQEIEEL--LKKLEEAELKELQAELEELEEELEElQEELERLEEALEELREELEEAEQALdaaERELAQ 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 426 LEIQLTAITTSEQYYSKEVKDLKTELEN---------------------EKLKNTELTSHCNKLSLENKE--------LT 476
Cdd:TIGR02168 487 LQARLDSLERLQENLEGFSEGVKALLKNqsglsgilgvlselisvdegyEAAIEAALGGRLQAVVVENLNaakkaiafLK 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 477 QETSD--MTLELKNQ-----QEDINNNKKQEERMLKQIENLQETETQLRNELEY-------------------------- 523
Cdd:TIGR02168 567 QNELGrvTFLPLDSIkgteiQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYllggvlvvddldnalelakklrpgyr 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 524 ------------------------VREELKQKRDEVKCKLDKSEENCNNLRKQVENKNKYIEELQQENKALKKKGTAESK 579
Cdd:TIGR02168 647 ivtldgdlvrpggvitggsaktnsSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSR 726
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 580 QLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDKrcqhkiaemvalM 659
Cdd:TIGR02168 727 QISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQ------------L 794
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 660 EKHKHQYDKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKREAKENTATLKEKKDK 739
Cdd:TIGR02168 795 KEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESE 874
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
136-782 |
4.24e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 64.01 E-value: 4.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 136 ARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRVQAENSRLEMHFKLKEDYEKIQHLEQEYKKEINDKEKQVSL 215
Cdd:PTZ00121 1277 ARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAA 1356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 216 LLIQITEKENKMKDLTflLEESRDKVNQLEEKT--KLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEE----D 289
Cdd:PTZ00121 1357 DEAEAAEEKAEAAEKK--KEEAKKKADAAKKKAeeKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEkkkaD 1434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 290 LQIATKTICQLTEEKETQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTK 369
Cdd:PTZ00121 1435 EAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADE 1514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 370 LTNNKEV-ELEELKKVLGEKETLLYENKQFEKIAEELKGTEQ----ELIGLLQAREKEVHDLEIQLTAITTSEQYYSKEV 444
Cdd:PTZ00121 1515 AKKAEEAkKADEAKKAEEAKKADEAKKAEEKKKADELKKAEElkkaEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARI 1594
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 445 KDLKTELENEKLKNTELTSHCNKLSLENKELTQETsdmtlELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYV 524
Cdd:PTZ00121 1595 EEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAE-----EEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKK 1669
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 525 REELKQKRDEVKCKLDKSEENCNNLRKQVENKNKyIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGE 604
Cdd:PTZ00121 1670 AEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKK-AEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEE 1748
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 605 ITdtyQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIE-ERDSELGLYKSK 683
Cdd:PTZ00121 1749 AK---KDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEgGKEGNLVINDSK 1825
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 684 EQEQSSLRasleiELSNLKAELLSVKKQLEIEREEKEKLKREAKENTATLKEKKDKKTQTF--LLETPEIYwKLDSKAVP 761
Cdd:PTZ00121 1826 EMEDSAIK-----EVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEeeIEEADEIE-KIDKDDIE 1899
|
650 660
....*....|....*....|.
gi 530363232 762 SQTVSRNFTSVDHGISKDKRD 782
Cdd:PTZ00121 1900 REIPNNNMAGKNNDIIDDKLD 1920
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
139-452 |
5.78e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.55 E-value: 5.78e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 139 AEKTKKYEYEREETRQVymdlNNNIEKMITAFEELRVQAEnsRLEMHFKLKEDYEKIQHLEQEYK-----KEINDKEKQV 213
Cdd:TIGR02169 166 AEFDRKKEKALEELEEV----EENIERLDLIIDEKRQQLE--RLRREREKAERYQALLKEKREYEgyellKEKEALERQK 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 214 SLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKLQSENLKQ-SIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQI 292
Cdd:TIGR02169 240 EAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDlGEEEQLRVKEKIGELEAEIASLERSIAEKERELED 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 293 ATKTICQLTEE---KETQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEemtK 369
Cdd:TIGR02169 320 AEERLAKLEAEidkLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLE---K 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 370 LTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQELIGLLQAREKEVHDLEIQLTAITTSEQYYSKEVKDLKT 449
Cdd:TIGR02169 397 LKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKE 476
|
...
gi 530363232 450 ELE 452
Cdd:TIGR02169 477 EYD 479
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
187-558 |
6.79e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.16 E-value: 6.79e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 187 KLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKLQSENLKQSIEKQHHLT 266
Cdd:TIGR02169 671 SEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLE 750
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 267 KELEDIKvslqrsvSTQKALEEDLQIATKTICQLTEEketqmEESNKARAAHSFV------VTEFETTVCSLEELLRTEQ 340
Cdd:TIGR02169 751 QEIENVK-------SELKELEARIEELEEDLHKLEEA-----LNDLEARLSHSRIpeiqaeLSKLEEEVSRIEARLREIE 818
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 341 QRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETllyenkqfekIAEELKGTEQELIGLLQARE 420
Cdd:TIGR02169 819 QKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEE----------ELEELEAALRDLESRLGDLK 888
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 421 KEVHDLEIQLTAIttseqyySKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMtLELKNQQEDINNNKKQE 500
Cdd:TIGR02169 889 KERDELEAQLREL-------ERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGED-EEIPEEELSLEDVQAEL 960
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 530363232 501 ERMLKQIENLQetETQLRNELEYvrEELKQKRDEVKCKLDKSEENCNNLRKQVENKNK 558
Cdd:TIGR02169 961 QRVEEEIRALE--PVNMLAIQEY--EEVLKRLDELKEKRAKLEEERKAILERIEEYEK 1014
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
87-739 |
2.00e-09 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 61.53 E-value: 2.00e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 87 YQEGLKDSDLEFGNEKVSLKLEEGIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKM 166
Cdd:pfam02463 212 YYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLL 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 167 ITAFEELRVQAENSRLEMHFK------LKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDK 240
Cdd:pfam02463 292 AKEEEELKSELLKLERRKVDDeeklkeSEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQL 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 241 VNQLEEKTKLQSENLKQSIEKqhhLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKETQMEESNKARAAHSF 320
Cdd:pfam02463 372 EEELLAKKKLESERLSSAAKL---KEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTE 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 321 VVTEFETT---------VCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETL 391
Cdd:pfam02463 449 EKEELEKQelkllkdelELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAH 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 392 LYENKQFEKIAEELKGTEQELIGLLQAREKEVHDLEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLE 471
Cdd:pfam02463 529 GRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQL 608
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 472 NKELTQETSDMTLELKNQ-QEDINNNKKQEERMLKQIENLQETETQLRNELEYVR-----EELKQKRDEVKCKLDKSEEN 545
Cdd:pfam02463 609 DKATLEADEDDKRAKVVEgILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEvkaslSELTKELLEIQELQEKAESE 688
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 546 CNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKISEENLLE 625
Cdd:pfam02463 689 LAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSE 768
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 626 EVEKAKVIADEAVKLQK---EIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLK 702
Cdd:pfam02463 769 LSLKEKELAEEREKTEKlkvEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKL 848
|
650 660 670
....*....|....*....|....*....|....*..
gi 530363232 703 AELLSVKKQLEIEREEKEKLKREAKENTATLKEKKDK 739
Cdd:pfam02463 849 EKLAEEELERLEEEITKEELLQELLLKEEELEEQKLK 885
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
159-671 |
2.24e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 61.19 E-value: 2.24e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 159 LNNNIEKMITAFEELRVQAENSRLEMHfKLKEDYEKIQHLEQEYKKEINDKEkqvsLLLIQITEKENKMKDLTFLLEESR 238
Cdd:TIGR04523 150 KEKELEKLNNKYNDLKKQKEELENELN-LLEKEKLNIQKNIDKIKNKLLKLE----LLLSNLKKKIQKNKSLESQISELK 224
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 239 DKVNQLEEKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEE-KETQMEESNKARAA 317
Cdd:TIGR04523 225 KQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQlNQLKSEISDLNNQK 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 318 HSFVVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEE----LKKVLGEKETLLY 393
Cdd:TIGR04523 305 EQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEkqneIEKLKKENQSYKQ 384
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 394 ENKQFEKIAEELKGTEQELIGLLQAREKEVHDLEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENK 473
Cdd:TIGR04523 385 EIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRE 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 474 ELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVRE-------------------ELKQKRDE 534
Cdd:TIGR04523 465 SLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKkisslkekieklesekkekESKISDLE 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 535 VKCKLDKSEENCNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEITDTYqKEIE 614
Cdd:TIGR04523 545 DELNKDDFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKEL-EKAK 623
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 530363232 615 DKKISEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIE 671
Cdd:TIGR04523 624 KENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKIDDIIE 680
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
300-601 |
3.32e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.72 E-value: 3.32e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 300 LTEEKETQMEE-SNKARAAHSFVVTEFETTVCSLEELLRteqqRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVEL 378
Cdd:COG1196 194 ILGELERQLEPlERQAEKAERYRELKEELKELEAELLLL----KLRELEAELEELEAELEELEAELEELEAELAELEAEL 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 379 EELKKVLGEKETLLyenkqfekiaEELKGTEQELI-------GLLQAREKEVHDLEIQLTAITTSEQYYSKEVKDLKTEL 451
Cdd:COG1196 270 EELRLELEELELEL----------EEAQAEEYELLaelarleQDIARLEERRRELEERLEELEEELAELEEELEELEEEL 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 452 ENEKLKNTELTSHCNKLSLENKELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYV---REEL 528
Cdd:COG1196 340 EELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALlerLERL 419
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 530363232 529 KQKRDEVKCKLDKSEENCNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQK 601
Cdd:COG1196 420 EEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAAR 492
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
97-742 |
3.70e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 60.93 E-value: 3.70e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 97 EFGNEKVSLKLEEGIQENKDLIKENNATRhlcnllkETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRvQ 176
Cdd:PTZ00121 1034 EYGNNDDVLKEKDIIDEDIDGNHEGKAEA-------KAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAK-K 1105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 177 AENSRLEMHFKLKEDYEKIqhlEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESR--DKVNQLEEKTKLQSEN 254
Cdd:PTZ00121 1106 TETGKAEEARKAEEAKKKA---EDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARkaEEARKAEDAKKAEAAR 1182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 255 LKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKETQMEESNKARAAHSFVVTEFETTVCSLEE 334
Cdd:PTZ00121 1183 KAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARM 1262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 335 LLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVEleELKKVLGEK---ETLLYENKQFEKIAEELKGTEQE 411
Cdd:PTZ00121 1263 AHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKAD--EAKKKAEEAkkaDEAKKKAEEAKKKADAAKKKAEE 1340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 412 ligllQAREKEVHDLEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLELKNQQE 491
Cdd:PTZ00121 1341 -----AKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAA 1415
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 492 D----------INNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKcKLDKSEENCNNLRKQVENKNKyIE 561
Cdd:PTZ00121 1416 AkkkadeakkkAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAK-KADEAKKKAEEAKKADEAKKK-AE 1493
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 562 ELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKfgEITDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQ 641
Cdd:PTZ00121 1494 EAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEA--KKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKK 1571
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 642 KEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEK 721
Cdd:PTZ00121 1572 AEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEE 1651
|
650 660
....*....|....*....|.
gi 530363232 722 LKREAKENTATLKEKKDKKTQ 742
Cdd:PTZ00121 1652 LKKAEEENKIKAAEEAKKAEE 1672
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
131-629 |
7.71e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 59.69 E-value: 7.71e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 131 LKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRVQAEnsRLEMHFKLKEDYEKIQHLEQEYKKEINDKE 210
Cdd:PRK03918 236 LKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVK--ELKELKEKAEEYIKLSEFYEEYLDELREIE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 211 KQVSLL----------LIQITEKENKMKDLTFLLEESRDKVNQLEEKTKLQSENLKQSIEKQHHLTK----ELEDIKVSL 276
Cdd:PRK03918 314 KRLSRLeeeingieerIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRltglTPEKLEKEL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 277 QRSVSTQKALEEDLQIATKTICQLTEEKETQMEESNKARAAHSFV-VTEFETTVCSLEELLRTE-------QQRLEKNED 348
Cdd:PRK03918 394 EELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCpVCGRELTEEHRKELLEEYtaelkriEKELKEIEE 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 349 QLKILTMELQKKSSELEEMTKLTNNKEV--ELEELKKVLGE--KETLLYENKQFEKIAEELKGTEQELIGLLQAREKEvH 424
Cdd:PRK03918 474 KERKLRKELRELEKVLKKESELIKLKELaeQLKELEEKLKKynLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKL-E 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 425 DLEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTEltshcnKLSLENKELtQETSDMTLELKNQQEDInnnkkqeERML 504
Cdd:PRK03918 553 ELKKKLAELEKKLDELEEELAELLKELEELGFESVE------ELEERLKEL-EPFYNEYLELKDAEKEL-------EREE 618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 505 KQIENLQETETQLRNELEYVREELKQKRDEVKCKLDK-SEENCNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNV 583
Cdd:PRK03918 619 KELKKLEEELDKAFEELAETEKRLEELRKELEELEKKySEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEK 698
|
490 500 510 520
....*....|....*....|....*....|....*....|....*....
gi 530363232 584 YEIKVNKLE---LELESAKQKFGEITDTYQKEIEDKKISEENLLEEVEK 629
Cdd:PRK03918 699 LKEELEEREkakKELEKLEKALERVEELREKVKKYKALLKERALSKVGE 747
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
332-646 |
1.05e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 59.31 E-value: 1.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 332 LEELLRTEQqRLEKNEDQLKILTMELQKKSSELEEMTKLTN-NKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQ 410
Cdd:TIGR02169 176 LEELEEVEE-NIERLDLIIDEKRQQLERLRREREKAERYQAlLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 411 ELIGLLQAREKEVHDLEIQLTAIT------TSEQY--YSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDM 482
Cdd:TIGR02169 255 KLTEEISELEKRLEEIEQLLEELNkkikdlGEEEQlrVKEKIGELEAEIASLERSIAEKERELEDAEERLAKLEAEIDKL 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 483 TLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKckldKSEENCNNLRKQVENKNKYIEE 562
Cdd:TIGR02169 335 LAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELK----DYREKLEKLKREINELKRELDR 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 563 LQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQK 642
Cdd:TIGR02169 411 LQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQR 490
|
....
gi 530363232 643 EIDK 646
Cdd:TIGR02169 491 ELAE 494
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
180-727 |
1.05e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 59.31 E-value: 1.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 180 SRLEMHFKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEktklqsenLKQSI 259
Cdd:PRK03918 221 EELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKE--------LKEKA 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 260 EKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLtEEKETQMEESNKARAAHSFVVTEFETTVCSLEElLRTE 339
Cdd:PRK03918 293 EEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKEL-EEKEERLEELKKKLKELEKRLEELEERHELYEE-AKAK 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 340 QQRLEKNEDQLKILTMELQKKsseleEMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQElIGLLQAR 419
Cdd:PRK03918 371 KEELERLKKRLTGLTPEKLEK-----ELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGK-CPVCGRE 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 420 EKEVHDLEIQltaittseQYYSKEVKDLKTELeneklknteltshcnklslenKELTQETSDMTLELKNQQEDINNNKK- 498
Cdd:PRK03918 445 LTEEHRKELL--------EEYTAELKRIEKEL---------------------KEIEEKERKLRKELRELEKVLKKESEl 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 499 -QEERMLKQIENLQETETqlrnelEYVREELKQKRDEvkckLDKSEENCNNLRKQVENKNKYIEELQQENKAL----KKK 573
Cdd:PRK03918 496 iKLKELAEQLKELEEKLK------KYNLEELEKKAEE----YEKLKEKLIKLKGEIKSLKKELEKLEELKKKLaeleKKL 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 574 GTAESKQLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKiSEENLLEEVEKAKVIADEAVKLQKEIDKRcQHKIA 653
Cdd:PRK03918 566 DELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKD-AEKELEREEKELKKLEEELDKAFEELAET-EKRLE 643
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 530363232 654 EMVALMEKHKHQYDKiiEERDSELGLYKSKEQEQSSLRASLEiELSNLKAELLSVKKQLEIEREEKEKLKREAK 727
Cdd:PRK03918 644 ELRKELEELEKKYSE--EEYEELREEYLELSRELAGLRAELE-ELEKRREEIKKTLEKLKEELEEREKAKKELE 714
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
101-742 |
1.74e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.54 E-value: 1.74e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 101 EKVSLKLEEGIQENKDLIKE-NNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNnIEKMITAFEELRVQAEN 179
Cdd:TIGR02169 187 ERLDLIIDEKRQQLERLRRErEKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLAS-LEEELEKLTEEISELEK 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 180 SRLEMHFKLKEDYEKIQHLEQE----YKKEINDKEKQVSLLLIQITEKENKMKDLtfllEESRDKVNQLEEKTKLQSENL 255
Cdd:TIGR02169 266 RLEEIEQLLEELNKKIKDLGEEeqlrVKEKIGELEAEIASLERSIAEKERELEDA----EERLAKLEAEIDKLLAEIEEL 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 256 KQSIEKQH------------------HLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKETQMEESNKARAA 317
Cdd:TIGR02169 342 EREIEEERkrrdklteeyaelkeeleDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEE 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 318 HSFV----------VTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGE 387
Cdd:TIGR02169 422 LADLnaaiagieakINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARA 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 388 KETLLYENKQFEKIAEE-LKGTEQELIGLLQAREKEVHDLEI----QLTAITTSEQYYSKE----VKDLK----TELENE 454
Cdd:TIGR02169 502 SEERVRGGRAVEEVLKAsIQGVHGTVAQLGSVGERYATAIEVaagnRLNNVVVEDDAVAKEaielLKRRKagraTFLPLN 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 455 KLKNTELTSHCNKL--------------------------------SLE--------------NKELTQETSDMT---LE 485
Cdd:TIGR02169 582 KMRDERRDLSILSEdgvigfavdlvefdpkyepafkyvfgdtlvveDIEaarrlmgkyrmvtlEGELFEKSGAMTggsRA 661
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 486 LKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVK----------CKLDKSEENCNNLRKQVEN 555
Cdd:TIGR02169 662 PRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSdasrkigeieKEIEQLEQEEEKLKERLEE 741
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 556 KNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELES-----AKQKFGEITDTYQK------EIEDKKISEENLL 624
Cdd:TIGR02169 742 LEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDlearlSHSRIPEIQAELSKleeevsRIEARLREIEQKL 821
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 625 EEVEKAKVIADEAVKLQKEIDKRCQHKIAEmvalMEKHKHQYDKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLKAE 704
Cdd:TIGR02169 822 NRLTLEKEYLEKEIQELQEQRIDLKEQIKS----IEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQ 897
|
730 740 750
....*....|....*....|....*....|....*...
gi 530363232 705 LLSVKKQLEIEREEKEKLKREAKENTATLKEKKDKKTQ 742
Cdd:TIGR02169 898 LRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSE 935
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
234-555 |
2.18e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 58.14 E-value: 2.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 234 LEESRDKVNQLEEKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKETQMEESNK 313
Cdd:TIGR02168 679 IEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTE 758
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 314 araahsfvvtefettvcsLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLY 393
Cdd:TIGR02168 759 ------------------LEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAA 820
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 394 ENKQ-FEKIAEELKGTEQELIGLLQAREKEVHDLEI---QLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLS 469
Cdd:TIGR02168 821 NLRErLESLERRIAATERRLEDLEEQIEELSEDIESlaaEIEELEELIEELESELEALLNERASLEEALALLRSELEELS 900
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 470 LENKELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQEtetQLRNELEYVREELKQKRDEVKCKLDKSEENCNNL 549
Cdd:TIGR02168 901 EELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQE---RLSEEYSLTLEEAEALENKIEDDEEEARRRLKRL 977
|
....*.
gi 530363232 550 RKQVEN 555
Cdd:TIGR02168 978 ENKIKE 983
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
392-745 |
2.19e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.16 E-value: 2.19e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 392 LYENKQFEKIAEELKGTEQELIGLLQAR---EKEVHDLEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKL 468
Cdd:TIGR02169 670 RSEPAELQRLRERLEGLKRELSSLQSELrriENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSL 749
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 469 SLENKELTQETSDMTLELKNQQEDINNNKKQEERmLKQIENLQETEtQLRNELEYVREELKQKR---DEVKCKLDKSEEN 545
Cdd:TIGR02169 750 EQEIENVKSELKELEARIEELEEDLHKLEEALND-LEARLSHSRIP-EIQAELSKLEEEVSRIEarlREIEQKLNRLTLE 827
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 546 CNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEItdtyQKEIEDKKISEENLLE 625
Cdd:TIGR02169 828 KEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDL----KKERDELEAQLRELER 903
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 626 EVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKhqydKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLKA-- 703
Cdd:TIGR02169 904 KIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKG----EDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAiq 979
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 530363232 704 ELLSVKKQLEIEREEKEKLKREAKENTATLKEKKDKKTQTFL 745
Cdd:TIGR02169 980 EYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREVFM 1021
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
167-694 |
2.27e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 58.13 E-value: 2.27e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 167 ITAFEELRVQAENSRLEMHFKLKEDYEKIQHLEqEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEE 246
Cdd:PRK02224 222 IERYEEQREQARETRDEADEVLEEHEERREELE-TLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLA 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 247 KTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTE---EKETQMEESNKARAAHSFVVT 323
Cdd:PRK02224 301 EAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEEraeELREEAAELESELEEAREAVE 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 324 EFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYENKQFEkIAE 403
Cdd:PRK02224 381 DRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEAGKCPE-CGQ 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 404 ELKGTEQelIGLLQAREKEVHDLEIQLTAITTseqyyskEVKDLKTELEN-EKLKNTEltSHCNKLSLENKELTQETSDM 482
Cdd:PRK02224 460 PVEGSPH--VETIEEDRERVEELEAELEDLEE-------EVEEVEERLERaEDLVEAE--DRIERLEERREDLEELIAER 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 483 TLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELK---QKRDEVKCKLDkSEENCNNLRKQVENKNKY 559
Cdd:PRK02224 529 RETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAelnSKLAELKERIE-SLERIRTLLAAIADAEDE 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 560 IEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKqkfgeitdtYQKEIEDKKISEENLLEEVEKAKVIADEAVK 639
Cdd:PRK02224 608 IERLREKREALAELNDERRERLAEKRERKRELEAEFDEAR---------IEEAREDKERAEEYLEQVEEKLDELREERDD 678
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 530363232 640 LQKEIDKrCQHKIAEMVALMEKHKHqydkiIEERDSEL-GLYKSKEQEQSS---LRASL 694
Cdd:PRK02224 679 LQAEIGA-VENELEELEELRERREA-----LENRVEALeALYDEAEELESMygdLRAEL 731
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
340-578 |
6.16e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.93 E-value: 6.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 340 QQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYE-NKQFEKIAEELKGTEQELIGLLQA 418
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRAlEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 419 REKEVHDLEIQLTAITTSEQYYSKEVKdLKTELENEKLKNTELTshcnklslenKELTQETSDMTLELKNQQEDINNNKK 498
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALL-LSPEDFLDAVRRLQYL----------KYLAPARREQAEELRADLAELAALRA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 499 QEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEENCNNLRKQVENKNKYIEELQQENKALKKKGTAES 578
Cdd:COG4942 168 ELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAG 247
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
232-577 |
7.25e-08 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 56.77 E-value: 7.25e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 232 FLLEESRDKVNQLEEKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQiatkticQLTEEKETQMEES 311
Cdd:pfam12128 597 ASEEELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLR-------RLFDEKQSEKDKK 669
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 312 NKARAAH-SFVVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKltnnkeVELEELKKVLGEKET 390
Cdd:pfam12128 670 NKALAERkDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQVVEGALD------AQLALLKAAIAARRS 743
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 391 LLyenkqfekiAEELKGTEQELIGLLQAR---EKEVHDLEiqlTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNK 467
Cdd:pfam12128 744 GA---------KAELKALETWYKRDLASLgvdPDVIAKLK---REIRTLERKIERIAVRRQEVLRYFDWYQETWLQRRPR 811
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 468 LSLENKELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQ----ETETQLRNELEYVRE-----ELKQKRDEVKCK 538
Cdd:pfam12128 812 LATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQvrlsENLRGLRCEMSKLATlkedaNSEQAQGSIGER 891
|
330 340 350
....*....|....*....|....*....|....*....
gi 530363232 539 LDKSEENCNNLRKQVENKNKYIEELQQENKALKKKGTAE 577
Cdd:pfam12128 892 LAQLEDLKLKRDYLSESVKKYVEHFKNVIADHSGSGLAE 930
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
560-743 |
1.02e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.16 E-value: 1.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 560 IEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEITDTYQkEIEDKKISEENLLEEVEKakviadEAVK 639
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIR-ALEQELAALEAELAELEK------EIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 640 LQKEIDKRcQHKIAEMVALMEKH-KHQYDKIIEERDSELGLYKSKE--QEQSSLRASLEIELSNLKAELLSVKKQLEIER 716
Cdd:COG4942 95 LRAELEAQ-KEELAELLRALYRLgRQPPLALLLSPEDFLDAVRRLQylKYLAPARREQAEELRADLAELAALRAELEAER 173
|
170 180
....*....|....*....|....*..
gi 530363232 717 EEKEKLKREAKENTATLKEKKDKKTQT 743
Cdd:COG4942 174 AELEALLAELEEERAALEALKAERQKL 200
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
515-728 |
1.65e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.38 E-value: 1.65e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 515 TQLRNELEYVREELKQKRDEVKCKLDKSEENCNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELE 594
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 595 LESAKQKFGEITDTYQKEIEDKKI----SEENLLEEVEKAKVIADEAVKLQKEID--KRCQHKIAEMVALMEKHKHQYDK 668
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLalllSPEDFLDAVRRLQYLKYLAPARREQAEelRADLAELAALRAELEAERAELEA 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 669 IIEERDSELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKREAKE 728
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
94-616 |
2.14e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 55.03 E-value: 2.14e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 94 SDLEFGNEKVSLKLEEGIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEEL 173
Cdd:TIGR04523 221 SELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 174 RVQAENsrlEMHFKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTfllEESRDKVNQLEEKTKlQSE 253
Cdd:TIGR04523 301 NNQKEQ---DWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSE---SENSEKQRELEEKQN-EIE 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 254 NLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKETQMEESNKARAAHSFVVTEFETTVCSLE 333
Cdd:TIGR04523 374 KLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKE 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 334 ELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKvlgEKETLLYENKQFEKIAEELKGTEQELI 413
Cdd:TIGR04523 454 LIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNE---EKKELEEKVKDLTKKISSLKEKIEKLE 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 414 GLLQAREKEVHDLEIQLTAITTSEQY--YSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLELKNQQE 491
Cdd:TIGR04523 531 SEKKEKESKISDLEDELNKDDFELKKenLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEK 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 492 DINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEENCNNLRKQVENKNKYIEELQQENKAL- 570
Cdd:TIGR04523 611 KISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKIDDIIELMKDWLKELs 690
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 530363232 571 ---KKKGTAESKQLNVYEIKVNKLELELESAK-QKFGEITDTYQKEIEDK 616
Cdd:TIGR04523 691 lhyKKYITRMIRIKDLPKLEEKYKEIEKELKKlDEFSKELENIIKNFNKK 740
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
138-747 |
3.45e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 54.20 E-value: 3.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 138 SAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRVQAENSRLEMHFK-LKEDYEKIQHLEQEYKKEINDKEK---QV 213
Cdd:TIGR00618 251 AQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKaVTQIEQQAQRIHTELQSKMRSRAKllmKR 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 214 SLLLIQITEKENKMKDLTFLLEESrDKVNQLEEKTKLQSENLKQSIEKQHHLTKELEDIKvslqrsvstqkALEEDLQIA 293
Cdd:TIGR00618 331 AAHVKQQSSIEEQRRLLQTLHSQE-IHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKT-----------TLTQKLQSL 398
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 294 TKTICQLTEEKETQMEESNKARAAHSFVVTEFETTVCSLEELlRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNN 373
Cdd:TIGR00618 399 CKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYA-ELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQT 477
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 374 KEVELEELKKVlgeketllyeNKQFEKIAEELKGTEQELIGllQAREKEVHDLEIQLTAITTSE-QYYSKEVKDLKTELE 452
Cdd:TIGR00618 478 KEQIHLQETRK----------KAVVLARLLELQEEPCPLCG--SCIHPNPARQDIDNPGPLTRRmQRGEQTYAQLETSEE 545
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 453 NEKLKNTELTSHCNKLSLENKELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKR 532
Cdd:TIGR00618 546 DVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQ 625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 533 DEVKCKLdkSEENC-NNLRKQVENKNKYIEELQQENKALKKKGTAESKQLnvYEIKVNKLELELESAKQKFgeitdTYQK 611
Cdd:TIGR00618 626 DLQDVRL--HLQQCsQELALKLTALHALQLTLTQERVREHALSIRVLPKE--LLASRQLALQKMQSEKEQL-----TYWK 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 612 EIEDKKISEENLLEEVEKakviadEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGlYKSKEQEQSSLR 691
Cdd:TIGR00618 697 EMLAQCQTLLRELETHIE------EYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLK-ARTEAHFNNNEE 769
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 530363232 692 ASLEIELSnlkAELLSVKKQLEIEREEKEKLKREAKENTATLKEKKDKKTQTFLLE 747
Cdd:TIGR00618 770 VTAALQTG---AELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQ 822
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
194-744 |
6.07e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 53.58 E-value: 6.07e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 194 KIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTfllEESRDKVNQLEEK-TKLQSENLKQSIEKQH--------- 263
Cdd:pfam15921 332 ELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFS---QESGNLDDQLQKLlADLHKREKELSLEKEQnkrlwdrdt 408
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 264 -------HLTKELEDIKVSLQRSVSTQKALEEDLQiatkticQLTEEKETQMEESNKARAAHSFVVTEFETTVCSLE--- 333
Cdd:pfam15921 409 gnsitidHLRRELDDRNMEVQRLEALLKAMKSECQ-------GQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRkvv 481
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 334 ELLRTEQQRLEKNEDQLKILTMELQKKSSELE----EMTKLTNNKEVELEELKKVLGEKETLlyENKQFEKIAEELKGTE 409
Cdd:pfam15921 482 EELTAKKMTLESSERTVSDLTASLQEKERAIEatnaEITKLRSRVDLKLQELQHLKNEGDHL--RNVQTECEALKLQMAE 559
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 410 QE-LIGLLQAREKEVHDLEIQLTAITTSEQYyskEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLElkn 488
Cdd:pfam15921 560 KDkVIEILRQQIENMTQLVGQHGRTAGAMQV---EKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELE--- 633
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 489 QQEDINNNKKQeermLKQIENLQETETQLRNELEYVREELKQkrdevkckldkseencnnlrkqvenknkyieeLQQENK 568
Cdd:pfam15921 634 KVKLVNAGSER----LRAVKDIKQERDQLLNEVKTSRNELNS--------------------------------LSEDYE 677
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 569 ALKKKGTAESKQLnvyEIKVNKLELELESAkqkfgeitdtyQKEIEDKKiseeNLLEEVEKAKviaDEAVKLQKEIDKRC 648
Cdd:pfam15921 678 VLKRNFRNKSEEM---ETTTNKLKMQLKSA-----------QSELEQTR----NTLKSMEGSD---GHAMKVAMGMQKQI 736
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 649 QHKIAEMVALMEKhkhqyDKIIEERDSELGLYKSKEQEQSSlraSLEIELSNLKAELLSVKKQLEIEREEKEKLkreaKE 728
Cdd:pfam15921 737 TAKRGQIDALQSK-----IQFLEEAMTNANKEKHFLKEEKN---KLSQELSTVATEKNKMAGELEVLRSQERRL----KE 804
|
570
....*....|....*.
gi 530363232 729 NTATLKEKKDKKTQTF 744
Cdd:pfam15921 805 KVANMEVALDKASLQF 820
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
237-728 |
2.88e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.51 E-value: 2.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 237 SRDKVNQLEEKTKLQSENLKQSIEKQHhLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKETQMEESNKARA 316
Cdd:TIGR00618 183 LMEFAKKKSLHGKAELLTLRSQLLTLC-TPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQL 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 317 AHSFV--VTEFETTVCSLEEL------------LRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELK 382
Cdd:TIGR00618 262 LKQLRarIEELRAQEAVLEETqerinrarkaapLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIE 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 383 KVLGEKETLLYENKQFEKIAEELKGTEQELIGLLQAREKeVHDLEIQLTAITTSEQYYSKEVKDLKTE--------LENE 454
Cdd:TIGR00618 342 EQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQH-IHTLQQQKTTLTQKLQSLCKELDILQREqatidtrtSAFR 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 455 KLKNTELTSHCN-KLSLENKELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRD 533
Cdd:TIGR00618 421 DLQGQLAHAKKQqELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQ 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 534 EVKCKLDKSEENCNNLRKQ----------VENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKL---ELELESAKQ 600
Cdd:TIGR00618 501 EEPCPLCGSCIHPNPARQDidnpgpltrrMQRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIqqsFSILTQCDN 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 601 KFGEITDTYQKEIED-KKISEENLLEEVEKAKVIADEAVKLQKEIDKR----CQHKIAEMVALMEKHKHQYDKIIEERDS 675
Cdd:TIGR00618 581 RSKEDIPNLQNITVRlQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQdvrlHLQQCSQELALKLTALHALQLTLTQERV 660
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 530363232 676 ELGLYKSKEQEQSSL--RASLEIELSNLKAELLSVKKQLE----IEREEKEKLKREAKE 728
Cdd:TIGR00618 661 REHALSIRVLPKELLasRQLALQKMQSEKEQLTYWKEMLAqcqtLLRELETHIEEYDRE 719
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
108-628 |
2.96e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 51.19 E-value: 2.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 108 EEGIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRVQAENSRLEmhfk 187
Cdd:PRK02224 233 RETRDEADEVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDAD---- 308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 188 lKEDYEKIQHLEQEYKKEINDKEKQVSLlliQITEKENKMKDLtflleesRDKVNQLEEktklQSENLKqsiEKQHHLTK 267
Cdd:PRK02224 309 -AEAVEARREELEDRDEELRDRLEECRV---AAQAHNEEAESL-------REDADDLEE----RAEELR---EEAAELES 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 268 ELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKETQMEESNKARAAHSFVVTEfettVCSLEELLRTEQQRLEKNE 347
Cdd:PRK02224 371 ELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRER----EAELEATLRTARERVEEAE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 348 DQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQELIGLLQAREKEVHDLE 427
Cdd:PRK02224 447 ALLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIERLEERREDLEELIA 526
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 428 IQLTAI-TTSEQYYS--KEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLELKN------QQEDINNNKK 498
Cdd:PRK02224 527 ERRETIeEKRERAEElrERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESlerirtLLAAIADAED 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 499 QEERMLKQIENLQETETQLRNELEYVREELKQKRDEVkckldkSEENCNNLRKQVENKNKYIEELQQENKALKKKGTAES 578
Cdd:PRK02224 607 EIERLREKREALAELNDERRERLAEKRERKRELEAEF------DEARIEEAREDKERAEEYLEQVEEKLDELREERDDLQ 680
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 530363232 579 KQLNVYEikvNKLElELESAKQKfgeitdtyQKEIEDKKISEENLLEEVE 628
Cdd:PRK02224 681 AEIGAVE---NELE-ELEELRER--------REALENRVEALEALYDEAE 718
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
331-675 |
3.57e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.22 E-value: 3.57e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 331 SLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKvlgEKETLLYENKQFEKIAEELKGTEQ 410
Cdd:TIGR02169 671 SEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEK---EIEQLEQEEEKLKERLEELEEDLS 747
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 411 ELIGLLQAREKEVHDLEIQLTAITTSEQYYSKEVKDLKTELENEKLKN-----TELTSHCNKLSLENKELTQETSDMTLE 485
Cdd:TIGR02169 748 SLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEiqaelSKLEEEVSRIEARLREIEQKLNRLTLE 827
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 486 LKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKckldKSEENCNNLRKQVENKNKYIEELQQ 565
Cdd:TIGR02169 828 KEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALR----DLESRLGDLKKERDELEAQLRELER 903
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 566 enkalkKKGTAESkQLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKkiSEENLLEEVEKAKVIADEAVKLQKEID 645
Cdd:TIGR02169 904 ------KIEELEA-QIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIP--EEELSLEDVQAELQRVEEEIRALEPVN 974
|
330 340 350
....*....|....*....|....*....|
gi 530363232 646 KRCQHKIAEMVALMEKHKHQYDKIIEERDS 675
Cdd:TIGR02169 975 MLAIQEYEEVLKRLDELKEKRAKLEEERKA 1004
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
368-601 |
3.79e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 3.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 368 TKLTNNKEVELEELKKVLGEKETLLYEN-KQFEKIAEELKGTEQELIgllqAREKEVHDLEIQLTAITTSEQYYSKEVKD 446
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALkKEEKALLKQLAALERRIA----ALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 447 LKTELENEKLKNTELTSHCNKLSLENKeltqetsdmtLELKNQQEDINNNKKQEERMLKQIENLQETETQLR---NELEY 523
Cdd:COG4942 95 LRAELEAQKEELAELLRALYRLGRQPP----------LALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRadlAELAA 164
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 530363232 524 VREELKQKRDEVKCKLDKSEENCNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQK 601
Cdd:COG4942 165 LRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
203-740 |
4.00e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.79 E-value: 4.00e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 203 KKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVST 282
Cdd:TIGR04523 46 KNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVE 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 283 QKALEEDLQIATKTICQLTEEKETQMEESNKARAAHSFVVTEFEtTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSS 362
Cdd:TIGR04523 126 LNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKE-ELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLS 204
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 363 ELEEMTKLTNNKEVELEELKKVLGE-KETLLYENKQFEKIAEELKGTEQELIGLLQAREKEVHDLEIQLTAITTSEQYYS 441
Cdd:TIGR04523 205 NLKKKIQKNKSLESQISELKKQNNQlKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIK 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 442 ---KEVKDLKTELENEKLKnteltshcnKLSLENKELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLR 518
Cdd:TIGR04523 285 eleKQLNQLKSEISDLNNQ---------KEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSE 355
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 519 NELEYVREELKQKRDEV---KCKLDKSEENCNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELEL 595
Cdd:TIGR04523 356 SENSEKQRELEEKQNEIeklKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETI 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 596 ESAKQKFGEITDT---YQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALmEKHKHQYDKIIEE 672
Cdd:TIGR04523 436 IKNNSEIKDLTNQdsvKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKL-NEEKKELEEKVKD 514
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 530363232 673 RDSELGLYKSKEQEQSSLRASLEIELSNLKAELLSV-----KKQLEIEREEKEKLKREAKENTATLKEKKDKK 740
Cdd:TIGR04523 515 LTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDdfelkKENLEKEIDEKNKEIEELKQTQKSLKKKQEEK 587
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
221-736 |
4.74e-06 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 50.56 E-value: 4.74e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 221 TEKENKMKDLTFLLEESRDKVNQLE-EKTKLQS--ENLKQSIEKQHHLTKELEDIKVSLQRSVstqKALEEDLQIATKTI 297
Cdd:pfam01576 71 QELEEILHELESRLEEEEERSQQLQnEKKKMQQhiQDLEEQLDEEEAARQKLQLEKVTTEAKI---KKLEEDILLLEDQN 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 298 CQLTEEKEtQMEESnkaraahsfvVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVE 377
Cdd:pfam01576 148 SKLSKERK-LLEER----------ISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGE 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 378 LEELKKVLGEKETllyenkQFEKIAEELKGTEQELIGLLQAREKEVHDLEIQLTAITTSEQYYSkevkDLKTELENEKLK 457
Cdd:pfam01576 217 STDLQEQIAELQA------QIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRELEAQIS----ELQEDLESERAA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 458 NTELTSHCNKLSLENKELTQETSDmTLELKNQQEDINNNKKQEERMLKQieNLQETETQLRNELEYVREELKQKRDEVKC 537
Cdd:pfam01576 287 RNKAEKQRRDLGEELEALKTELED-TLDTTAAQQELRSKREQEVTELKK--ALEEETRSHEAQLQEMRQKHTQALEELTE 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 538 KLDKSEENCNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLEL---ELESAKQKFGEITDTYQKEIE 614
Cdd:pfam01576 364 QLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQArlsESERQRAELAEKLSKLQSELE 443
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 615 dkkiSEENLLEEVEKakviadEAVKLQKEIDKRCQ--HKIAEMVALMEKHKHQYDKIIEERDSELGLYKSKEQEQSSLRA 692
Cdd:pfam01576 444 ----SVSSLLNEAEG------KNIKLSKDVSSLESqlQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKR 513
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 530363232 693 SLEIELSNLKAELLSVKKQLEIE-------REEKEKLKREAKENTATLKEK 736
Cdd:pfam01576 514 NVERQLSTLQAQLSDMKKKLEEDagtlealEEGKKRLQRELEALTQQLEEK 564
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
321-740 |
6.55e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 50.06 E-value: 6.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 321 VVTEFETTVCSLEELLRTE---QQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYENKQ 397
Cdd:PRK03918 170 VIKEIKRRIERLEKFIKRTeniEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELES 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 398 FEKIAEELKGTEQELIGLLQAREKEVHDLEiqltaittseqyysKEVKDLKtELENEKLKNTELTSHCNKLSLENKELTQ 477
Cdd:PRK03918 250 LEGSKRKLEEKIRELEERIEELKKEIEELE--------------EKVKELK-ELKEKAEEYIKLSEFYEEYLDELREIEK 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 478 ETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEENCNNLRKqVENKN 557
Cdd:PRK03918 315 RLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEK-LEKEL 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 558 KYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKF----GEITDTYQKEI-----EDKKISEENLLEEVE 628
Cdd:PRK03918 394 EELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCpvcgRELTEEHRKELleeytAELKRIEKELKEIEE 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 629 KAKVIADEAVKLQKEIDKrcQHKIAEMVALMEKhkhqydkiIEERDSELGLYKSKEQEQSSLrasleiELSNLKAELLSV 708
Cdd:PRK03918 474 KERKLRKELRELEKVLKK--ESELIKLKELAEQ--------LKELEEKLKKYNLEELEKKAE------EYEKLKEKLIKL 537
|
410 420 430
....*....|....*....|....*....|..
gi 530363232 709 KKQLEIEREEKEKLKREAKENTATLKEKKDKK 740
Cdd:PRK03918 538 KGEIKSLKKELEKLEELKKKLAELEKKLDELE 569
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
331-725 |
7.43e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 50.12 E-value: 7.43e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 331 SLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTkltNNKEVELEELKKVLGEKETLL---------YENKQFEKI 401
Cdd:pfam15921 128 AMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDML---EDSNTQIEQLRKMMLSHEGVLqeirsilvdFEEASGKKI 204
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 402 AEELKGTEQELIGLLQAREKEVHDLEIQLTAITTSEQYYSKEVKDLKTELENEklknTELTshcnkLSLENKELTQETSD 481
Cdd:pfam15921 205 YEHDSMSTMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKSESQNK----IELL-----LQQHQDRIEQLISE 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 482 MTLELKNQQEDINNNKKQEERMLKQIENLQEtetQLRNE-------LEYVREELKQKRDEVKCKLDKSEENCNNLRKQVE 554
Cdd:pfam15921 276 HEVEITGLTEKASSARSQANSIQSQLEIIQE---QARNQnsmymrqLSDLESTVSQLRSELREAKRMYEDKIEELEKQLV 352
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 555 NKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEITDtyqkEIEDKKISEENLLEEVEKAKVIA 634
Cdd:pfam15921 353 LANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRLWD----RDTGNSITIDHLRRELDDRNMEV 428
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 635 DEAVKLQKEIDKRCQ-----------------HKIAEMVALMEKHKHQYDKIIEERDSELGLYKSKEQEQSSLRASLE-- 695
Cdd:pfam15921 429 QRLEALLKAMKSECQgqmerqmaaiqgkneslEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQek 508
|
410 420 430
....*....|....*....|....*....|...
gi 530363232 696 ---IELSNlkAELLSVKKQLEIEREEKEKLKRE 725
Cdd:pfam15921 509 eraIEATN--AEITKLRSRVDLKLQELQHLKNE 539
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
234-570 |
7.60e-06 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 49.51 E-value: 7.60e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 234 LEESRDKVNQLEEKTKLQSENLKQSIEKQH-HLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKETQMEEsn 312
Cdd:pfam07888 46 LLQAQEAANRQREKEKERYKRDREQWERQRrELESRVAELKEELRQSREKHEELEEKYKELSASSEELSEEKDALLAQ-- 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 313 kaRAAHSFVVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLL 392
Cdd:pfam07888 124 --RAAHEARIRELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSL 201
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 393 YENKQFEKIAEELKGTEQELIGLLQAREKEVHDLEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLEN 472
Cdd:pfam07888 202 AQRDTQVLQLQDTITTLTQKLTTAHRKEAENEALLEELRSLQERLNASERKVEGLGEELSSMAAQRDRTQAELHQARLQA 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 473 KELTQETSDMTLEL--------KNQQEDINNNKKQEERMLKQIENLQETETQL---RNELEYVREELKQKRDEVKCKLDK 541
Cdd:pfam07888 282 AQLTLQLADASLALregrarwaQERETLQQSAEADKDRIEKLSAELQRLEERLqeeRMEREKLEVELGREKDCNRVQLSE 361
|
330 340
....*....|....*....|....*....
gi 530363232 542 SEENCNNLRKQVENKNKYIEELQQENKAL 570
Cdd:pfam07888 362 SRRELQELKASLRVAQKEKEQLQAEKQEL 390
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
171-705 |
1.04e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.55 E-value: 1.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 171 EELRVQAENSRLemhFKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKL 250
Cdd:COG1196 279 LELELEEAQAEE---YELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEE 355
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 251 QSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKETQMEESNKARAAHSFVvtefettvc 330
Cdd:COG1196 356 AEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEEL--------- 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 331 sLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQ 410
Cdd:COG1196 427 -EEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEG 505
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 411 ELIGLLQAREKEVHDLEIQLTA--ITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQEtsdmTLELKN 488
Cdd:COG1196 506 FLEGVKAALLLAGLRGLAGAVAvlIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRAT----FLPLDK 581
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 489 QQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVkckldkseencnnlRKQVENKNKYIEELQQENK 568
Cdd:COG1196 582 IRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLV--------------AARLEAALRRAVTLAGRLR 647
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 569 ALKKKGTAESKQLNVYEIKVNKLELELESAKQKfgeitdtyQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDKRC 648
Cdd:COG1196 648 EVTLEGEGGSAGGSLTGGSRRELLAALLEAEAE--------LEELAERLAEEELELEEALLAEEEEERELAEAEEERLEE 719
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 530363232 649 QHKIAEMVALMEKHKHQYDKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLKAEL 705
Cdd:COG1196 720 ELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
511-739 |
1.09e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.61 E-value: 1.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 511 QETETQLRNELEYVREELKQKRDEvkckLDKSEENCNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNK 590
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKE----LAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 591 LELELESAKQKFGEITDTYQKeiedkkISEENLLEEVEKAKVIADEAVKLQ--KEIDKRCQHKIAEMVALMEKHKHQYDK 668
Cdd:COG4942 95 LRAELEAQKEELAELLRALYR------LGRQPPLALLLSPEDFLDAVRRLQylKYLAPARREQAEELRADLAELAALRAE 168
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 530363232 669 IIEERDSELGLYKSKEQEQSslrasleiELSNLKAELLSVKKQLEIEREEKEKLKREAKENTATLKEKKDK 739
Cdd:COG4942 169 LEAERAELEALLAELEEERA--------ALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIAR 231
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
203-748 |
1.35e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 49.27 E-value: 1.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 203 KKEINDKEKQVSLLLIQITEKENKMKDLtflLEESRDKVNQLEEKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVST 282
Cdd:TIGR00606 400 IERQEDEAKTAAQLCADLQSKERLKQEQ---ADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILEL 476
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 283 QKALeedlqiaTKTICQLTEEKETQMEESNKARaahsfvVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSS 362
Cdd:TIGR00606 477 DQEL-------RKAERELSKAEKNSLTETLKKE------VKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKD 543
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 363 ELEEMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQELIGL---LQAREKEVHDLEIQLTAITTSEQY 439
Cdd:TIGR00606 544 KMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLnkeLASLEQNKNHINNELESKEEQLSS 623
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 440 YSKEVKDLkTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLRN 519
Cdd:TIGR00606 624 YEDKLFDV-CGSQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQS 702
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 520 ELEYVREELKQKRDEVKCKLDKSEENCNNLRKQ---VENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELE 596
Cdd:TIGR00606 703 KLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRqsiIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEE 782
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 597 SAKQKFGEITDTYQKEIEdkkiseenlLEEVEKAkvIADEAVKLQKEIDKRCQHKIAEMValmEKHKHQYDKIIeerdSE 676
Cdd:TIGR00606 783 SAKVCLTDVTIMERFQME---------LKDVERK--IAQQAAKLQGSDLDRTVQQVNQEK---QEKQHELDTVV----SK 844
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 530363232 677 LGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKREAKENTATLKEKKDKKTQTFLLET 748
Cdd:TIGR00606 845 IELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLET 916
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
178-756 |
1.48e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 48.89 E-value: 1.48e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 178 ENSRLEMHFKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKLQSENLKQ 257
Cdd:TIGR00606 523 EMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELAS 602
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 258 SIEKQHHLTKELEDIKVSLQR------SVSTQKALEEDLQIATKTICQLTEEK----------ETQMEESNKARAAHSFV 321
Cdd:TIGR00606 603 LEQNKNHINNELESKEEQLSSyedklfDVCGSQDEESDLERLKEEIEKSSKQRamlagatavySQFITQLTDENQSCCPV 682
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 322 VTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEketLLYENKQFEKI 401
Cdd:TIGR00606 683 CQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPE---LRNKLQKVNRD 759
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 402 AEELKGTEQELIGLLQAREKEVHDLEIQLTAITTSEQYYsKEVKDLKTELENEKLKnteltSHCNKLSLENKELTQETSD 481
Cdd:TIGR00606 760 IQRLKNDIEEQETLLGTIMPEEESAKVCLTDVTIMERFQ-MELKDVERKIAQQAAK-----LQGSDLDRTVQQVNQEKQE 833
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 482 MTLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKR--DEVKCKLDKSEENCNNLRKQVENKN-- 557
Cdd:TIGR00606 834 KQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQqfEEQLVELSTEVQSLIREIKDAKEQDsp 913
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 558 --KYIEELQQENKALKKKGTAESK----QLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKISEENLLEEVEKAK 631
Cdd:TIGR00606 914 leTFLEKDQQEKEELISSKETSNKkaqdKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQLEECEKHQ 993
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 632 VIADEAVKLQKEI--DKRCQHKIAEMVALMEKHKHQYDKIIEERDSELG-LYKSKEQEQSSLRASLEIELSNLKAELLSV 708
Cdd:TIGR00606 994 EKINEDMRLMRQDidTQKIQERWLQDNLTLRKRENELKEVEEELKQHLKeMGQMQVLQMKQEHQKLEENIDLIKRNHVLA 1073
|
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 530363232 709 KKQLEIEREEKEKLKREAKENTATLKEKKDKKTQTFLLETPEIYWKLD 756
Cdd:TIGR00606 1074 LGRQKGYEKEIKHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLD 1121
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
200-532 |
1.58e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 48.81 E-value: 1.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 200 QEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVN-QLEEKTKLQSENLKQSIEKQHHLTK-----ELEDIK 273
Cdd:TIGR00618 559 ASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEkLSEAEDMLACEQHALLRKLQPEQDLqdvrlHLQQCS 638
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 274 VSLQRSVSTQKALEEDL-----QIATKTICQLTEEKETQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEKNED 348
Cdd:TIGR00618 639 QELALKLTALHALQLTLtqervREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDR 718
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 349 QLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTE-QELIGLLQAREKEVHDLE 427
Cdd:TIGR00618 719 EFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAElSHLAAEIQFFNRLREEDT 798
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 428 IQLTAITTSEQYYSKEVKDLKTeLENEKLKNTELTSHcnklslenkELTQETSDMTLELKNQQEDINNNKKQEERMLKQI 507
Cdd:TIGR00618 799 HLLKTLEAEIGQEIPSDEDILN-LQCETLVQEEEQFL---------SRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQ 868
|
330 340
....*....|....*....|....*
gi 530363232 508 ENLqeteTQLRNELEYVREELKQKR 532
Cdd:TIGR00618 869 AKI----IQLSDKLNGINQIKIQFD 889
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
264-737 |
2.15e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 48.52 E-value: 2.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 264 HLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLtEEKETQMEESNKARAAHSFVVTEFETTVCSLEELlRTEQQRL 343
Cdd:PRK03918 173 EIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREI-NEISSELPELREELEKLEKEVKELEELKEEIEEL-EKELESL 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 344 EKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETL--LYEN---------KQFEKIAEELKGTEQEL 412
Cdd:PRK03918 251 EGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLseFYEEyldelreieKRLSRLEEEINGIEERI 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 413 IGL------LQAREKEVHDLEIQLTAITTSEQYYsKEVKDLKTELENEKLKNTELTShcNKLSLENKELTQETSDMTLEL 486
Cdd:PRK03918 331 KELeekeerLEELKKKLKELEKRLEELEERHELY-EEAKAKKEELERLKKRLTGLTP--EKLEKELEELEKAKEEIEEEI 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 487 KNQQEDINNNKKQEERMLKQIENLQE------------TETQLRNELEYVREELKQKRDEVKcKLDKSEENCNNLRKQVE 554
Cdd:PRK03918 408 SKITARIGELKKEIKELKKAIEELKKakgkcpvcgrelTEEHRKELLEEYTAELKRIEKELK-EIEEKERKLRKELRELE 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 555 NKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEIT---DTYQKEIEDKKISEENLLEEVEKAK 631
Cdd:PRK03918 487 KVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKgeiKSLKKELEKLEELKKKLAELEKKLD 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 632 VIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSElglykSKEQEQSSLRASLEIELSNLKAELLSVKKQ 711
Cdd:PRK03918 567 ELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAE-----KELEREEKELKKLEEELDKAFEELAETEKR 641
|
490 500
....*....|....*....|....*.
gi 530363232 712 LEIEREEKEKLKREAKENTATLKEKK 737
Cdd:PRK03918 642 LEELRKELEELEKKYSEEEYEELREE 667
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
473-646 |
2.64e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.52 E-value: 2.64e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 473 KELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEEN------- 545
Cdd:COG3883 26 SELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALYRSggsvsyl 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 546 ---------------CNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEITDTYQ 610
Cdd:COG3883 106 dvllgsesfsdfldrLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLA 185
|
170 180 190
....*....|....*....|....*....|....*.
gi 530363232 611 kEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDK 646
Cdd:COG3883 186 -QLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAA 220
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
580-742 |
3.88e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.13 E-value: 3.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 580 QLNVYEIKVNKLELELESAKQKfgeiTDTYQKEIEDKKISEENLLEEVEKAKviaDEAVKLQKEIDKRcQHKIAEMVALM 659
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAE----LDALQAELEELNEEYNELQAELEALQ---AEIDKLQAEIAEA-EAEIEERREEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 660 EKH-KHQY----------------------------DKIIEERDSELGLYKSKEQEQSSLRASLEI---ELSNLKAELLS 707
Cdd:COG3883 89 GERaRALYrsggsvsyldvllgsesfsdfldrlsalSKIADADADLLEELKADKAELEAKKAELEAklaELEALKAELEA 168
|
170 180 190
....*....|....*....|....*....|....*
gi 530363232 708 VKKQLEIEREEKEKLKREAKENTATLKEKKDKKTQ 742
Cdd:COG3883 169 AKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEA 203
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
321-562 |
4.55e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.60 E-value: 4.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 321 VVTEFETTVCSLEELLRTEQQrLEKNEDQLKILTmELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYENKQfEK 400
Cdd:COG4913 223 TFEAADALVEHFDDLERAHEA-LEDAREQIELLE-PIRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAEL-EE 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 401 IAEELKGTEQElIGLLQAREKEVHDLEIQLTAittseQYYS---KEVKDLKTELENeklknteLTSHCNKLSLENKELTQ 477
Cdd:COG4913 300 LRAELARLEAE-LERLEARLDALREELDELEA-----QIRGnggDRLEQLEREIER-------LERELEERERRRARLEA 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 478 ETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEENCNNLRKQVENKN 557
Cdd:COG4913 367 LLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALR 446
|
....*
gi 530363232 558 KYIEE 562
Cdd:COG4913 447 DALAE 451
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
195-628 |
4.78e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.07 E-value: 4.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 195 IQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKlQSENLKQSIEKQHHLTKELEDIKv 274
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEE-ELEELEAELEELREELEKLEKLL- 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 275 SLQRSVSTQKALEEDLQIatktICQLTEEKETQMEESNKARAAHSFVVTEFETTVCSLEELLRteqQRLEKNEDQLKILT 354
Cdd:COG4717 126 QLLPLYQELEALEAELAE----LPERLEELEERLEELRELEEELEELEAELAELQEELEELLE---QLSLATEEELQDLA 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 355 MELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQE-LIGLLQAREKEVHDLEIQLTAI 433
Cdd:COG4717 199 EELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAaALLALLGLGGSLLSLILTIAGV 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 434 TT---------------SEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLELKNQQEDINNNKK 498
Cdd:COG4717 279 LFlvlgllallflllarEKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEE 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 499 QEERMlkQIENLQETETQLRNELE-------YVREELKQKRDEVKCKLDKSEENCNNLRKQVENKNKYIEELQQENKALK 571
Cdd:COG4717 359 LEEEL--QLEELEQEIAALLAEAGvedeeelRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEE 436
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 530363232 572 KKgtaesKQLNVYEIKVNKLELELESAKQKFGEITDtyQKEIEDKKISEENLLEEVE 628
Cdd:COG4717 437 LE-----EELEELEEELEELREELAELEAELEQLEE--DGELAELLQELEELKAELR 486
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
352-735 |
7.79e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.30 E-value: 7.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 352 ILTMELQKKSSELEemTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQELIGLLQAREK---EVHDLEI 428
Cdd:COG4717 46 MLLERLEKEADELF--KPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEElreELEKLEK 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 429 QLTAITTSEQYYS--KEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLELKNQQEDinnNKKQEERMLKQ 506
Cdd:COG4717 124 LLQLLPLYQELEAleAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLA---TEEELQDLAEE 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 507 IENLQETETQLRNELEYVREELKQKRDEVKcKLDKSEENCNNLRKQVENKNKYI----------EELQQENKALKKKGTA 576
Cdd:COG4717 201 LEELQQRLAELEEELEEAQEELEELEEELE-QLENELEAAALEERLKEARLLLLiaaallallgLGGSLLSLILTIAGVL 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 577 ----------------ESKQLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKL 640
Cdd:COG4717 280 flvlgllallflllarEKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEEL 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 641 QKEIDKRCQHKiaEMVALMEKHKHQYDKIIEERDSELGLYKSKEQEQSSLRASLE------------IELSNLKAELLSV 708
Cdd:COG4717 360 EEELQLEELEQ--EIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEellgeleelleaLDEEELEEELEEL 437
|
410 420
....*....|....*....|....*..
gi 530363232 709 KKQLEIEREEKEKLKREAKENTATLKE 735
Cdd:COG4717 438 EEELEELEEELEELREELAELEAELEQ 464
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
471-758 |
9.31e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 46.50 E-value: 9.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 471 ENKELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEENCNNLR 550
Cdd:pfam02463 174 ALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEI 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 551 KQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKISEENLLEEVEKA 630
Cdd:pfam02463 254 ESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKE 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 631 KVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQydkiiEERDSELGLYKSKEQEQSSLRASlEIELSNLKAELLSVKK 710
Cdd:pfam02463 334 KEEIEELEKELKELEIKREAEEEEEEELEKLQEKL-----EQLEEELLAKKKLESERLSSAAK-LKEEELELKSEEEKEA 407
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 530363232 711 QLEIEREEKEKLKREAKENTATLKEKKDKKTQTFLLETPEIYWKLDSK 758
Cdd:pfam02463 408 QLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEK 455
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
234-455 |
1.01e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 234 LEESRDKVNQLEEKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKETQMEESNK 313
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEA 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 314 ARAAHSFVVTEFETT--VCSLEELLRTEQ-QRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKvlgEKET 390
Cdd:COG4942 102 QKEELAELLRALYRLgrQPPLALLLSPEDfLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERA---ELEA 178
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 530363232 391 LLYENKQFEKIAEELKGTEQELIGLLQAREKEvhdLEIQLTAITTSEQYYSKEVKDLKTELENEK 455
Cdd:COG4942 179 LLAELEEERAALEALKAERQKLLARLEKELAE---LAAELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
174-610 |
1.19e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.91 E-value: 1.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 174 RVQAENSRLEMHFKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKEnKMKDLTFLLEESRDKVNQLEEKTKlQSE 253
Cdd:COG4717 72 ELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLE-KLLQLLPLYQELEALEAELAELPE-RLE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 254 NLKQSIEKQHHLTKELEDIKVSLQRsvsTQKALEEDLQiatkticQLTEEKETQMEESNKARAAhsfvvtefettvcsLE 333
Cdd:COG4717 150 ELEERLEELRELEEELEELEAELAE---LQEELEELLE-------QLSLATEEELQDLAEELEE--------------LQ 205
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 334 ELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKltNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGTEQELI 413
Cdd:COG4717 206 QRLAELEEELEEAQEELEELEEELEQLENELEAAAL--EERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVL 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 414 GLL------QAREKEVHDLEI-QLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLEL 486
Cdd:COG4717 284 GLLallfllLAREKASLGKEAeELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEEL 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 487 ------KNQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEEncNNLRKQVENKNKYI 560
Cdd:COG4717 364 qleeleQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDE--EELEEELEELEEEL 441
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 530363232 561 EELQQENKALKKKGTAESKQLNVYEI--KVNKLELELESAKQKFGEITDTYQ 610
Cdd:COG4717 442 EELEEELEELREELAELEAELEQLEEdgELAELLQELEELKAELRELAEEWA 493
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
188-771 |
1.24e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 46.05 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 188 LKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKE----NKMKDLTFLLEESRDKVNQLEEKTKLQSEnlkqsiekqh 263
Cdd:PRK01156 188 LEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSieynNAMDDYNNLKSALNELSSLEDMKNRYESE---------- 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 264 hltkeledikvslqrsvstQKALEEDLQIATKTICQLTEEKETQME-ESNKARAAHSFVVTEFE--TTVCSLEELLRTEQ 340
Cdd:PRK01156 258 -------------------IKTAESDLSMELEKNNYYKELEERHMKiINDPVYKNRNYINDYFKykNDIENKKQILSNID 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 341 QRLEKNEDQLKILTmELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYE----NKQFEKIAEELKGTEQELIGLL 416
Cdd:PRK01156 319 AEINKYHAIIKKLS-VLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSieslKKKIEEYSKNIERMSAFISEIL 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 417 QAREKEVHDLEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENK------ELTQETSDMTL------ 484
Cdd:PRK01156 398 KIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVcpvcgtTLGEEKSNHIInhynek 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 485 ---------ELKNQQEDINNNKKQEERMLKQIE----NLQETETQLRNELEYVREELKQKRDEVKCKLDKSEENCNnlrk 551
Cdd:PRK01156 478 ksrleekirEIEIEVKDIDEKIVDLKKRKEYLEseeiNKSINEYNKIESARADLEDIKIKINELKDKHDKYEEIKN---- 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 552 qvENKNKYIEELQQEN---------------KALKKKGTAESKQLNVYEIKVNKLELELESAKQkfgeITDTYQKEIEDK 616
Cdd:PRK01156 554 --RYKSLKLEDLDSKRtswlnalavislidiETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKS----YIDKSIREIENE 627
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 617 KISEENLLEEVEKAKVIADeavKLQKEIDKrCQHKIAEMvalmekhkhqydKIIEERDSELglyKSKEQEQSSLRASLEI 696
Cdd:PRK01156 628 ANNLNNKYNEIQENKILIE---KLRGKIDN-YKKQIAEI------------DSIIPDLKEI---TSRINDIEDNLKKSRK 688
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 530363232 697 ELSNLKAELLSVKKQLEIEREEKEKLKREAKENTATL-KEKKDKKTQTFLLETPEIYWKLDSKAVPSQTVSRNFTS 771
Cdd:PRK01156 689 ALDDAKANRARLESTIEILRTRINELSDRINDINETLeSMKKIKKAIGDLKRLREAFDKSGVPAMIRKSASQAMTS 764
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
187-423 |
1.40e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.14 E-value: 1.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 187 KLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKLQSENLKQSIEKQHHLT 266
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQK 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 267 KELEDIKVSLQRSvSTQKALE--------EDLQIATKTICQLTEEKETQMEESNKARAAhsfvvtefettvcsleelLRT 338
Cdd:COG4942 104 EELAELLRALYRL-GRQPPLAlllspedfLDAVRRLQYLKYLAPARREQAEELRADLAE------------------LAA 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 339 EQQRLEKNEDQLKILTMELQKKSSELEemtKLTNNKEVELEELKKVLGEKETllyENKQFEKIAEELKGTEQELIGLLQA 418
Cdd:COG4942 165 LRAELEAERAELEALLAELEEERAALE---ALKAERQKLLARLEKELAELAA---ELAELQQEAEELEALIARLEAEAAA 238
|
....*
gi 530363232 419 REKEV 423
Cdd:COG4942 239 AAERT 243
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
440-643 |
2.07e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 45.45 E-value: 2.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 440 YSKEVKDLKTELENEKLKNTELtshcNKLSLENKELTQETSDMTlelKNQQED-INNNKKQEERMLKQIENLQETETQLR 518
Cdd:COG5022 873 SAQRVELAERQLQELKIDVKSI----SSLKLVNLELESEIIELK---KSLSSDlIENLEFKTELIARLKKLLNNIDLEEG 945
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 519 NELEYVREELKQKRDEVKCKLDKSEENCNNLRKQ----VENKNKYIEELQQENKAL------KKKGTAESKQLNVYEIKV 588
Cdd:COG5022 946 PSIEYVKLPELNKLHEVESKLKETSEEYEDLLKKstilVREGNKANSELKNFKKELaelskqYGALQESTKQLKELPVEV 1025
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 530363232 589 nkleLELESAKQKFGEITDTYQKEIEDKKISEENLLEEVEKAKviADEAVKLQKE 643
Cdd:COG5022 1026 ----AELQSASKIISSESTELSILKPLQKLKGLLLLENNQLQA--RYKALKLRRE 1074
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
504-674 |
2.09e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.76 E-value: 2.09e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 504 LKQIENLQETETQLRnELEYVREELKQKRDEVKCKLDKSEENCNNLRKQVENKNKYIEELQQENKALKKKGTAESKQLNv 583
Cdd:COG1579 6 LRALLDLQELDSELD-RLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLG- 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 584 yEIKVNK----LELELESAKqkfgeitdtyqKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALM 659
Cdd:COG1579 84 -NVRNNKeyeaLQKEIESLK-----------RRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEEL 151
|
170
....*....|....*
gi 530363232 660 EKHKHQYDKIIEERD 674
Cdd:COG1579 152 AELEAELEELEAERE 166
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
395-702 |
2.65e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.51 E-value: 2.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 395 NKQFEKIAEELKGTEQELIGL---LQAREKEVHDLEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLE 471
Cdd:COG4372 44 QEELEQLREELEQAREELEQLeeeLEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKE 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 472 NKELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELEY-----VREELKQKRDEVKCKLDKSEENC 546
Cdd:COG4372 124 RQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQAlseaeAEQALDELLKEANRNAEKEEELA 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 547 NNLRKQV-ENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKISEENLLE 625
Cdd:COG4372 204 EAEKLIEsLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAAL 283
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 530363232 626 EVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLK 702
Cdd:COG4372 284 ELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLVGLLDNDVLELLS 360
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
503-747 |
2.80e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 44.53 E-value: 2.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 503 MLKQIENLQETETQLRNELEYVR-EELKQKrdevkckldkSEENCNNLRKQVENKNKYIEELQQENKALKKkgtaESKQL 581
Cdd:PRK05771 61 KLRSYLPKLNPLREEKKKVSVKSlEELIKD----------VEEELEKIEKEIKELEEEISELENEIKELEQ----EIERL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 582 NVYE-IKVN-KLELELESAKQKFGEItdtyqkeiedKKISEENLLEEVEKAKVIADEAVKlqkeidkrcqhkiAEMVALM 659
Cdd:PRK05771 127 EPWGnFDLDlSLLLGFKYVSVFVGTV----------PEDKLEELKLESDVENVEYISTDK-------------GYVYVVV 183
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 660 EKHKHQYDKIIEE-RDSELGLYKSKEQEQSS-LRASLEIELSNLKAELLSVKKQLEIEREEKEKLKREAKENTATLKEK- 736
Cdd:PRK05771 184 VVLKELSDEVEEElKKLGFERLELEEEGTPSeLIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELERa 263
|
250
....*....|....*.
gi 530363232 737 ----KDKKT-QTFLLE 747
Cdd:PRK05771 264 ealsKFLKTdKTFAIE 279
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
204-422 |
3.31e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 3.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 204 KEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKLQSENLKQsiekqhhLTKELEDIKVSLQRSVSTQ 283
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRA-------LEQELAALEAELAELEKEI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 284 KALEEDLQIATKTICQLTEEKETQMEESNKARAAHSFVVTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSE 363
Cdd:COG4942 93 AELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAE 172
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 530363232 364 LEEMTKLTNNKEVELEELKKVLGEKETLLY----ENKQFEKIAEELKGTEQELIGLLQAREKE 422
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLArlekELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
522-735 |
3.40e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.24 E-value: 3.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 522 EYVREELKQKRDEVKCKLDKSEENCNNLRKQVENKNKYIEELQQENK--ALKKKGTAESKQLNVYEIKVNKLELELESAK 599
Cdd:COG3206 160 AYLEQNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGlvDLSEEAKLLLQQLSELESQLAEARAELAEAE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 600 QKFgeitDTYQKEIEDKKISEENLLEEVEKAKVIADEAvKLQKEIDKrcqhkiaemvaLMEKHKHQYDKIIEERDSELGL 679
Cdd:COG3206 240 ARL----AALRAQLGSGPDALPELLQSPVIQQLRAQLA-ELEAELAE-----------LSARYTPNHPDVIALRAQIAAL 303
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 530363232 680 YKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEK----------LKREAKENTATLKE 735
Cdd:COG3206 304 RAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAElpeleaelrrLEREVEVARELYES 369
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
337-687 |
3.62e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 44.34 E-value: 3.62e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 337 RTEQQRLEKNEDQLkiLTMELQKKSSELEEMTKLTNN---KEVELEELKKVLGEKETLLYE-NKQFEKIAEELKGTEQEl 412
Cdd:pfam17380 287 RQQQEKFEKMEQER--LRQEKEEKAREVERRRKLEEAekaRQAEMDRQAAIYAEQERMAMErERELERIRQEERKRELE- 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 413 igllQAREKEVhdleiqltaitTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLELKNQQed 492
Cdd:pfam17380 364 ----RIRQEEI-----------AMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIR-- 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 493 innnKKQEERMLKQIENLQETETQlrnELEYVREELKQKRDEVKckldkseencnNLRKQVENKNKYIEELQQEnkalkk 572
Cdd:pfam17380 427 ----AEQEEARQREVRRLEEERAR---EMERVRLEEQERQQQVE-----------RLRQQEEERKRKKLELEKE------ 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 573 kgtaESKQLNVYEIKVNKLELELESAKQKFgeITDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEIDKRcqHKI 652
Cdd:pfam17380 483 ----KRDRKRAEEQRRKILEKELEERKQAM--IEEERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEER--RRI 554
|
330 340 350
....*....|....*....|....*....|....*
gi 530363232 653 AEMVALMEKHKHQYDKIIEERDSELGLYKSKEQEQ 687
Cdd:pfam17380 555 QEQMRKATEERSRLEAMEREREMMRQIVESEKARA 589
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
558-732 |
6.92e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.23 E-value: 6.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 558 KYIEELQQENKALKKKGTAESKQlnvyEIKVNKLELELESaKQKFGEITDTyQKEIEDKKISEENLLEEVEKAKviaDEA 637
Cdd:PRK12704 42 RILEEAKKEAEAIKKEALLEAKE----EIHKLRNEFEKEL-RERRNELQKL-EKRLLQKEENLDRKLELLEKRE---EEL 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 638 VKLQKEIDKRCQHkiaemvalMEKHKHQYDKIIEERDSEL----GLykSKEQEQSSLRASLEIELSNLKAELLSvkkqlE 713
Cdd:PRK12704 113 EKKEKELEQKQQE--------LEKKEEELEELIEEQLQELerisGL--TAEEAKEILLEKVEEEARHEAAVLIK-----E 177
|
170
....*....|....*....
gi 530363232 714 IEREEKEKLKREAKENTAT 732
Cdd:PRK12704 178 IEEEAKEEADKKAKEILAQ 196
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
518-742 |
6.99e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.52 E-value: 6.99e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 518 RNELEYVREELkqkrDEVKCKLDKSEENCNNLRKQVENKNKYiEELQQENKalKKKGTAESKQLNVYEIKVNKLELELES 597
Cdd:TIGR02169 176 LEELEEVEENI----ERLDLIIDEKRQQLERLRREREKAERY-QALLKEKR--EYEGYELLKEKEALERQKEAIERQLAS 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 598 AKQKFGEITDTYQkEIEDKKISEENLLEEVEK--AKVIADEAVKLQKEIDK------RCQHKIAEMVALMEKHKHQYDKI 669
Cdd:TIGR02169 249 LEEELEKLTEEIS-ELEKRLEEIEQLLEELNKkiKDLGEEEQLRVKEKIGEleaeiaSLERSIAEKERELEDAEERLAKL 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 670 IEERD---SELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIE--------------REEKEKLKREAKENTAT 732
Cdd:TIGR02169 328 EAEIDkllAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVdkefaetrdelkdyREKLEKLKREINELKRE 407
|
250
....*....|
gi 530363232 733 LKEKKDKKTQ 742
Cdd:TIGR02169 408 LDRLQEELQR 417
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
470-572 |
7.13e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 43.31 E-value: 7.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 470 LENKELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLRNELE-------YVREELKQKRDEVKCKLDKS 542
Cdd:COG2433 385 LIEKELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELEekderieRLERELSEARSEERREIRKD 464
|
90 100 110
....*....|....*....|....*....|....*.
gi 530363232 543 EE------NCNNLRKQVENKNKYIEELQQENKALKK 572
Cdd:COG2433 465 REisrldrEIERLERELEEERERIEELKRKLERLKE 500
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
612-728 |
7.13e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 43.31 E-value: 7.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 612 EIEDKKISEENLLEEVEKAKVIADEAVKLQKEiDKRCQhKIAEMVALMEKHKHQYDKIIEERDSELG-----LYKSKEQE 686
Cdd:COG2433 380 EALEELIEKELPEEEPEAEREKEHEERELTEE-EEEIR-RLEEQVERLEAEVEELEAELEEKDERIErlereLSEARSEE 457
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 530363232 687 QSSLRAslEIELSNLKAELLSVKKQLEIEREEKEKLKREAKE 728
Cdd:COG2433 458 RREIRK--DREISRLDREIERLERELEEERERIEELKRKLER 497
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
554-743 |
7.73e-04 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 43.28 E-value: 7.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 554 ENKNKYIEELQQENKALKKKgtaeSKQLNVYEIKVNKLELELESAKQKFgeitdtyqKEIEDKKISEenLLEEVEKAKVI 633
Cdd:PRK00409 516 EKLNELIASLEELERELEQK----AEEAEALLKEAEKLKEELEEKKEKL--------QEEEDKLLEE--AEKEAQQAIKE 581
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 634 A-DEAVKLQKEIDKRCQHKIAEMVA--LMEKHKHqYDKIIEERDSELglyKSKEQEQSSLRASLEIELSNL--KAELLSV 708
Cdd:PRK00409 582 AkKEADEIIKELRQLQKGGYASVKAheLIEARKR-LNKANEKKEKKK---KKQKEKQEELKVGDEVKYLSLgqKGEVLSI 657
|
170 180 190
....*....|....*....|....*....|....*...
gi 530363232 709 KKQLEIEREE---KEKLKREAKENTATLKEKKDKKTQT 743
Cdd:PRK00409 658 PDDKEAIVQAgimKMKVPLSDLEKIQKPKKKKKKKPKT 695
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
101-753 |
8.89e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 43.42 E-value: 8.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 101 EKVSLKLEEGIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRVQAENS 180
Cdd:pfam02463 341 EKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDL 420
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 181 RLEMHFKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKLQSENLKQSIE 260
Cdd:pfam02463 421 LKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQ 500
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 261 KQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQL------------TEEKETQMEESNKARAAHSFVVTEFETT 328
Cdd:pfam02463 501 KESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENykvaistaviveVSATADEVEERQKLVRALTELPLGARKL 580
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 329 VCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEELKGT 408
Cdd:pfam02463 581 RLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAE 660
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 409 EQELIGLLQAREKEVHDLEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLELKN 488
Cdd:pfam02463 661 KSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKL 740
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 489 QQEDINN-----NKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEENCNNLRKQVENKNKYIEEL 563
Cdd:pfam02463 741 LKQKIDEeeeeeEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEE 820
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 564 QQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQ-KFGEITDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQK 642
Cdd:pfam02463 821 QLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELErLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKK 900
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 643 EIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKS---------------KEQEQSSLRASLEIELSNLKAELLS 707
Cdd:pfam02463 901 ELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELlleeadekekeennkEEEEERNKRLLLAKEELGKVNLMAI 980
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 530363232 708 VKKQLEIEREEKEKLKRE-AKENTATLKEKKDKKTQTFLLETPEIYW 753
Cdd:pfam02463 981 EEFEEKEERYNKDELEKErLEEEKKKLIRAIIEETCQRLKEFLELFV 1027
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
171-558 |
9.41e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.02 E-value: 9.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 171 EELRVQAEnSRLEMHFKLKEDYEKIQHLEQEYKKEINdkekqVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKL 250
Cdd:PRK04863 789 EQLRAERE-ELAERYATLSFDVQKLQRLHQAFSRFIG-----SHLAVAFEADPEAELRQLNRRRVELERALADHESQEQQ 862
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 251 QSENLKQSIEKQHHLTKELEDIKVslqrsvstqkaLEEDlqiatkTICQLTEEKETQMEESNKARAahsfVVTEFETTVC 330
Cdd:PRK04863 863 QRSQLEQAKEGLSALNRLLPRLNL-----------LADE------TLADRVEEIREQLDEAEEAKR----FVQQHGNALA 921
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 331 SLEELLRTEQQRLEKNEdqlkiltmELQKKSSELEEMTKLTNNKEVELEELKKVlgeKETLLYENkqfekiAEELKGTEQ 410
Cdd:PRK04863 922 QLEPIVSVLQSDPEQFE--------QLKQDYQQAQQTQRDAKQQAFALTEVVQR---RAHFSYED------AAEMLAKNS 984
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 411 ELIGLLQAREKEV-HDLEIQLTAITTSEQYYSKEVKDLkteleneklknTELTSHCNKLSLENKELTQETSDMTLelknq 489
Cdd:PRK04863 985 DLNEKLRQRLEQAeQERTRAREQLRQAQAQLAQYNQVL-----------ASLKSSYDAKRQMLQELKQELQDLGV----- 1048
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 530363232 490 QEDINNNKKQEERMLKQIENLQETETQlRNELEYVREELKQKRDEVKCKLDKSEENCNNLRKQVENKNK 558
Cdd:PRK04863 1049 PADSGAEERARARRDELHARLSANRSR-RNQLEKQLTFCEAEMDNLTKKLRKLERDYHEMREQVVNAKA 1116
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
505-646 |
1.19e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.98 E-value: 1.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 505 KQIENLQETETQLRNELEyvreELKQKRDEVKCKLDKSEENCNNLRKQV-ENKNKYIEELQQENKALKKKGTAESKQLNV 583
Cdd:COG4913 288 RRLELLEAELEELRAELA----RLEAELERLEARLDALREELDELEAQIrGNGGDRLEQLEREIERLERELEERERRRAR 363
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 530363232 584 YEIKVNKLELELESAKQKFGEItdtyQKEIEDKKISEENLLEEVEKAKV-IADEAVKLQKEIDK 646
Cdd:COG4913 364 LEALLAALGLPLPASAEEFAAL----RAEAAALLEALEEELEALEEALAeAEAALRDLRRELRE 423
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
150-274 |
1.71e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 42.12 E-value: 1.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 150 EETRQVYMDLNNNIEKMITAFEELRVQAENSRLEMHF------KLKEDYEK------------IQHLEQEYKKEINDKEK 211
Cdd:PRK00409 505 EEAKKLIGEDKEKLNELIASLEELERELEQKAEEAEAllkeaeKLKEELEEkkeklqeeedklLEEAEKEAQQAIKEAKK 584
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 530363232 212 QVSLLLIQITEKEnKMKDLTFLLEESRDKVNQLEEKTKLQSENLKQSIEKQHHLtKELEDIKV 274
Cdd:PRK00409 585 EADEIIKELRQLQ-KGGYASVKAHELIEARKRLNKANEKKEKKKKKQKEKQEEL-KVGDEVKY 645
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
101-414 |
1.78e-03 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 42.35 E-value: 1.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 101 EKVSLKLEEGIQENKDLIKENNATRhlcNLLKETCARSAEKTKKYEYEREETRQVYMDLNNNIEKMITAFEELRVQAENs 180
Cdd:TIGR02168 739 EAEVEQLEERIAQLSKELTELEAEI---EELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTL- 814
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 181 rlemhfkLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKLQSENLKQSIE 260
Cdd:TIGR02168 815 -------LNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEE 887
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 261 KQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKE--TQMEESNKARAAHSFVVT-----EFETTVCSLE 333
Cdd:TIGR02168 888 ALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEglEVRIDNLQERLSEEYSLTleeaeALENKIEDDE 967
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 334 ELLRTEQQRLEKNEDQLKILTM----ELQKKSSELEEMTKLTNNKEVELEELKKVLGE--KETLLYENKQFEKIAEELKG 407
Cdd:TIGR02168 968 EEARRRLKRLENKIKELGPVNLaaieEYEELKERYDFLTAQKEDLTEAKETLEEAIEEidREARERFKDTFDQVNENFQR 1047
|
....*..
gi 530363232 408 TEQELIG 414
Cdd:TIGR02168 1048 VFPKLFG 1054
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
337-712 |
2.26e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 41.96 E-value: 2.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 337 RTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYE---------------------N 395
Cdd:TIGR00606 206 QMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKimkldneikalksrkkqmekdN 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 396 KQFEKIAEE-LKGTEQELIGLLQAREKEVHDLEIQLTAITTSEQYYSKEVKDL---KTELENE----KLKNTELTSHCNK 467
Cdd:TIGR00606 286 SELELKMEKvFQGTDEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLnqeKTELLVEqgrlQLQADRHQEHIRA 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 468 LSLENKEL-------------------------------------TQETSDMTLELKNQQEDINNNKKQEERMLKQIENL 510
Cdd:TIGR00606 366 RDSLIQSLatrleldgfergpfserqiknfhtlvierqedeaktaAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELK 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 511 QETETQLRNELEYVREELKQKRDEVKCKLDKSEENCNNLRK-QVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVN 589
Cdd:TIGR00606 446 KEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERElSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEME 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 590 KLELELESAKQKFGEITDTYQKEIEDKKISEENLLEEVEKA------KVIADEAVKLQKEIDKRCQH--KIAEMVALMEK 661
Cdd:TIGR00606 526 QLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLgyfpnkKQLEDWLHSKSKEINQTRDRlaKLNKELASLEQ 605
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|.
gi 530363232 662 HKHQYDKIIEERDSELGLYKSKEQEQSSLRAsLEIELSNLKAELLSVKKQL 712
Cdd:TIGR00606 606 NKNHINNELESKEEQLSSYEDKLFDVCGSQD-EESDLERLKEEIEKSSKQR 655
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
111-722 |
3.21e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 41.60 E-value: 3.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 111 IQENKDLIKENNATRHLCNLLKETCARSAEKTKKYE------------YEREETRQVYMDL-------------NNNIEK 165
Cdd:COG5022 827 KREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSllkketiylqsaQRVELAERQLQELkidvksisslklvNLELES 906
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 166 MITafeELRVQAENS-RLEMHFKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQL 244
Cdd:COG5022 907 EII---ELKKSLSSDlIENLEFKTELIARLKKLLNNIDLEEGPSIEYVKLPELNKLHEVESKLKETSEEYEDLLKKSTIL 983
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 245 EEKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEdLQIATKTICQLTEEKETQMEESNkaraahsfvvte 324
Cdd:COG5022 984 VREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVAE-LQSASKIISSESTELSILKPLQK------------ 1050
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 325 fettvcsLEELLRTEQQRLEKNEDQLKiLTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYENKQFEKIAEE 404
Cdd:COG5022 1051 -------LKGLLLLENNQLQARYKALK-LRRENSLLDDKQLYQLESTENLLKTINVKDLEVTNRNLVKPANVLQFIVAQM 1122
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 405 LK-GTEQELIGLLqarEKEVHDLEI--QLTAITTSEQYYSKEVKDLKTELENEKLKNT--ELTSHCNKLSLENKELTQET 479
Cdd:COG5022 1123 IKlNLLQEISKFL---SQLVNTLEPvfQKLSVLQLELDGLFWEANLEALPSPPPFAALseKRLYQSALYDEKSKLSSSEV 1199
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 480 SDMTLELKNQQEDINNN---KKQEERMLKQIENLQETETQLrNELEYVREELKQKRDEVKCKL-DKSEENCNNLRKQVEN 555
Cdd:COG5022 1200 NDLKNELIALFSKIFSGwprGDKLKKLISEGWVPTEYSTSL-KGFNNLNKKFDTPASMSNEKLlSLLNSIDNLLSSYKLE 1278
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 556 KNKYIEELQQENKALKkkgtaeSKQLNVYEIKVNKLELELESAKQKFGEITDTY--QKEIEDKKISEENLLEEVEKAKVI 633
Cdd:COG5022 1279 EEVLPATINSLLQYIN------VGLFNALRTKASSLRWKSATEVNYNSEELDDWcrEFEISDVDEELEELIQAVKVLQLL 1352
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 634 ADEAVKLQKEIDKRCQHKIAEMVALMEKHK-----HQYDKIIEERDSELGLyKSKEQEQSSLRASLE---IELSNLKAEL 705
Cdd:COG5022 1353 KDDLNKLDELLDACYSLNPAEIQNLKSRYDpadkeNNLPKEILKKIEALLI-KQELQLSLEGKDETEvhlSEIFSEEKSL 1431
|
650
....*....|....*..
gi 530363232 706 LSVKKQLEIEREEKEKL 722
Cdd:COG5022 1432 ISLDRNSIYKEEVLSSL 1448
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
234-422 |
3.29e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.97 E-value: 3.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 234 LEESRDKVNQLE-EKTKLQSE--NLKQSIEKqhhLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTEEKETQMEE 310
Cdd:COG3883 18 IQAKQKELSELQaELEAAQAEldALQAELEE---LNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 311 SNKARAAHSFV--------VTEFETTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELK 382
Cdd:COG3883 95 LYRSGGSVSYLdvllgsesFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELE 174
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 530363232 383 KVLGEKETLLYENKQFEKIAEELKGTEQELIGLLQAREKE 422
Cdd:COG3883 175 AQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAA 214
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
171-768 |
3.31e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 41.50 E-value: 3.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 171 EELRVQAENSRLEMHFKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQLEEKTKL 250
Cdd:pfam02463 176 KKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIES 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 251 QSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKticQLTEEKETQMEESNKARAAHSFVVTEFETTVC 330
Cdd:pfam02463 256 SKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKS---ELLKLERRKVDDEEKLKESEKEKKKAEKELKK 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 331 SLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEV---ELEELKKVLGEKETLLYENKQFEKIAEELKG 407
Cdd:pfam02463 333 EKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKkklESERLSSAAKLKEEELELKSEEEKEAQLLLE 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 408 TEQELIGLLQAREKEVHDLEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKELTQETSDMTLELK 487
Cdd:pfam02463 413 LARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSR 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 488 NQQEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEvKCKLDKSEENCNNLRKQVENKNKYIEELQQEN 567
Cdd:pfam02463 493 QKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVE-NYKVAISTAVIVEVSATADEVEERQKLVRALT 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 568 KALKKKGTA--ESKQLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKISEENLLEEVEKAKVIADEAVKLQKEID 645
Cdd:pfam02463 572 ELPLGARKLrlLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKG 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 646 KRCQHKIAEMVALMEKHKhQYDKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKRE 725
Cdd:pfam02463 652 VSLEEGLAEKSEVKASLS-ELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEA 730
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 530363232 726 AKENTATLKEKKDKKTQTFLLETPEIYWKLDSKAVPSQTVSRN 768
Cdd:pfam02463 731 QDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKE 773
|
|
| PRK00106 |
PRK00106 |
ribonuclease Y; |
467-653 |
3.32e-03 |
|
ribonuclease Y;
Pssm-ID: 178867 [Multi-domain] Cd Length: 535 Bit Score: 41.01 E-value: 3.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 467 KLSLENKELT-----QETSDMTLELKNQQEDINNNKKQEERMLKQiENLQETETQLRNELEYVREELKQKRDEVKCKLDK 541
Cdd:PRK00106 27 KSAKEAAELTllnaeQEAVNLRGKAERDAEHIKKTAKRESKALKK-ELLLEAKEEARKYREEIEQEFKSERQELKQIESR 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 542 SEENCNNLRKQVENKNKYIEELQQENKALKKKgtaeSKQLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKiSEE 621
Cdd:PRK00106 106 LTERATSLDRKDENLSSKEKTLESKEQSLTDK----SKHIDEREEQVEKLEEQKKAELERVAALSQAEAREIILAE-TEN 180
|
170 180 190
....*....|....*....|....*....|....*..
gi 530363232 622 NLLEEV-----EKAKVIADEAVKLQKEIDKRCQHKIA 653
Cdd:PRK00106 181 KLTHEIatrirEAEREVKDRSDKMAKDLLAQAMQRLA 217
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
616-736 |
3.47e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.92 E-value: 3.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 616 KKISEENLLEEVEKAKVIADEAvklQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELG-LYKSKEQEQSSLRASL 694
Cdd:PRK12704 26 KKIAEAKIKEAEEEAKRILEEA---KKEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQkLEKRLLQKEENLDRKL 102
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 530363232 695 EiELSNLKAELLSVKKQLEIEREEKEKLKREAKENTATLKEK 736
Cdd:PRK12704 103 E-LLEKREEELEKKEKELEQKQQELEKKEEELEELIEEQLQE 143
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
219-432 |
3.52e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.58 E-value: 3.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 219 QITEKENKMKDLTFLLEESRDKVNQLEEKtklqsenlkqsIEKqhhLTKELEDIKVSLQRSVSTQKALEEDLQIATKTIC 298
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAE-----------LEE---LNEEYNELQAELEALQAEIDKLQAEIAEAEAEIE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 299 QLTEEKETQMEESNKARAAHSFVVTEFETTvcSLEELLrTEQQRLEK-NEDQLKILTmELQKKSSELEEMTKLTNNKEVE 377
Cdd:COG3883 83 ERREELGERARALYRSGGSVSYLDVLLGSE--SFSDFL-DRLSALSKiADADADLLE-ELKADKAELEAKKAELEAKLAE 158
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 530363232 378 LEELKKVL-GEKETLLYENKQFEKIAEELKGTEQELIGLLQAREKEVHDLEIQLTA 432
Cdd:COG3883 159 LEALKAELeAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAA 214
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
503-768 |
4.12e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 41.11 E-value: 4.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 503 MLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEENCN---NLRKQVENKNKYIEELQQENKALKKKGTAESK 579
Cdd:pfam02463 140 QGGKIEIIAMMKPERRLEIEEEAAGSRLKRKKKEALKKLIEETENlaeLIIDLEELKLQELKLKEQAKKALEYYQLKEKL 219
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 580 QLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKK---ISEENLLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMV 656
Cdd:pfam02463 220 ELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKqeiEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELK 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 657 ALMEKHKHQYdKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKREAKENTATLKEK 736
Cdd:pfam02463 300 SELLKLERRK-VDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAK 378
|
250 260 270
....*....|....*....|....*....|..
gi 530363232 737 KDKKTQTFLLETPEIYWKLDSKAVPSQTVSRN 768
Cdd:pfam02463 379 KKLESERLSSAAKLKEEELELKSEEEKEAQLL 410
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
158-667 |
4.15e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.05 E-value: 4.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 158 DLNNNIEKMITAFEELRvqaensrlEMHFKLKEDYEKIQHLE------QEYKKEINDKEKQVSLLLI--------QITEK 223
Cdd:COG4913 222 DTFEAADALVEHFDDLE--------RAHEALEDAREQIELLEpirelaERYAAARERLAELEYLRAAlrlwfaqrRLELL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 224 ENKMKDLTFLLEESRDKVNQLEEKTKLQSENLkQSIEKQH---------HLTKELEDIKVSLQRSVSTQKALEEDLQIAt 294
Cdd:COG4913 294 EAELEELRAELARLEAELERLEARLDALREEL-DELEAQIrgnggdrleQLEREIERLERELEERERRRARLEALLAAL- 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 295 kticQLTEEKETQMEESNKARAAHsfvvtefetTVCSLEELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNK 374
Cdd:COG4913 372 ----GLPLPASAEEFAALRAEAAA---------LLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNI 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 375 EVELEELKKVlgeketllyenkqfekIAEELKGTEQEL--IG-LLQAREKEvhdlEIQLTAITT-----------SEQYY 440
Cdd:COG4913 439 PARLLALRDA----------------LAEALGLDEAELpfVGeLIEVRPEE----ERWRGAIERvlggfaltllvPPEHY 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 441 SK-----------------EVKDLKTELENEKLK-------------------NTELTSHCNKLSLEN-KELTQETSDMT 483
Cdd:COG4913 499 AAalrwvnrlhlrgrlvyeRVRTGLPDPERPRLDpdslagkldfkphpfrawlEAELGRRFDYVCVDSpEELRRHPRAIT 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 484 LEL----------KNQQEDIN-------NNKKQEERMLKQIENLQETETQLRNELEYVREELK--QKRDEVKCKLDKSEE 544
Cdd:COG4913 579 RAGqvkgngtrheKDDRRRIRsryvlgfDNRAKLAALEAELAELEEELAEAEERLEALEAELDalQERREALQRLAEYSW 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 545 NCNNL-------------RKQVENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEITDTYQk 611
Cdd:COG4913 659 DEIDVasaereiaeleaeLERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLE- 737
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 530363232 612 EIEDKKISE-----ENLLEEVEKAKVIADEAVKLQKEIDK---RCQHKIAEMVALMEKHKHQYD 667
Cdd:COG4913 738 AAEDLARLElrallEERFAAALGDAVERELRENLEERIDAlraRLNRAEEELERAMRAFNREWP 801
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
333-544 |
6.93e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 39.81 E-value: 6.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 333 EELLRTEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKkvlgeketllyenKQFEKIAEELKGTEQEL 412
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQ-------------AEIDKLQAEIAEAEAEI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 413 IGLLQAREKEVHDLEIQLTAITTSEQYY-SKEVKDLktelenekLKNTELTshcNKLSLENKELTQETSDMTLELKNQQE 491
Cdd:COG3883 82 EERREELGERARALYRSGGSVSYLDVLLgSESFSDF--------LDRLSAL---SKIADADADLLEELKADKAELEAKKA 150
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 530363232 492 DINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVKCKLDKSEE 544
Cdd:COG3883 151 ELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEA 203
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
355-707 |
7.24e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 40.27 E-value: 7.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 355 MELQKKSSELEE------MTKLTNNKEVELEELKKVlGEKETLLyeNKQFEKIAEELKGTEQELIGLLQAREKEVHDLEi 428
Cdd:PLN02939 84 MELPQKSTSSDDdhnrasMQRDEAIAAIDNEQQTNS-KDGEQLS--DFQLEDLVGMIQNAEKNILLLNQARLQALEDLE- 159
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 429 qltAITTSEQYYSKEVKDLKTELENeklkntelTSHCNKLSLENKELTQETSDMTLELKNQ-QEDINNNKKQEERMLKQI 507
Cdd:PLN02939 160 ---KILTEKEALQGKINILEMRLSE--------TDARIKLAAQEKIHVEILEEQLEKLRNElLIRGATEGLCVHSLSKEL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 508 ENLQETETQLRNELEYVREELkqkrDEVKckldKSEENCNNLRKQVENKNKYIEELQQENKALKKK-GTAESKQLNVYEI 586
Cdd:PLN02939 229 DVLKEENMLLKDDIQFLKAEL----IEVA----ETEERVFKLEKERSLLDASLRELESKFIVAQEDvSKLSPLQYDCWWE 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 587 KVNKLELELESAKQKFGEITDTYQK--EIEDKKISEENLLEEVEKAKV------IADEAVKLQKEIDKRCQHKIAEMVAL 658
Cdd:PLN02939 301 KVENLQDLLDRATNQVEKAALVLDQnqDLRDKVDKLEASLKEANVSKFssykveLLQQKLKLLEERLQASDHEIHSYIQL 380
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 530363232 659 mekhkhqYDKIIEERDSELGlyKSKEQeqsSLRASLEIELSNLKAELLS 707
Cdd:PLN02939 381 -------YQESIKEFQDTLS--KLKEE---SKKRSLEHPADDMPSEFWS 417
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
187-639 |
7.40e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 40.42 E-value: 7.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 187 KLKEDYEKIQHLEQEYKKEIN-------DKEKQVSLLLIQITEKenKMKDLTFLLEESRDKVNQLEEKTKLQSE----NL 255
Cdd:TIGR01612 1204 KDKTSLEEVKGINLSYGKNLGklflekiDEEKKKSEHMIKAMEA--YIEDLDEIKEKSPEIENEMGIEMDIKAEmetfNI 1281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 256 KQSIEKQHHLTKELEDIKVSLQRSVSTQkaLEEDLQiATKTICQLTEEKETQMEESNKaraaHSFVVTEFETTVCSLEEL 335
Cdd:TIGR01612 1282 SHDDDKDHHIISKKHDENISDIREKSLK--IIEDFS-EESDINDIKKELQKNLLDAQK----HNSDINLYLNEIANIYNI 1354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 336 LRTeqQRLEKNEDQLKILTMELQKKS----SELEEMTKL--TNNKEVELEE-----------------LKKVLGEKETLL 392
Cdd:TIGR01612 1355 LKL--NKIKKIIDEVKEYTKEIEENNknikDELDKSEKLikKIKDDINLEEckskiestlddkdidecIKKIKELKNHIL 1432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 393 YE----NKQFEKIAEELKGTEQELIGLLQAREKEVHDLEIQLTAITTSEQYYSKEVKDLKtelenEKLKNTELTSHCNKL 468
Cdd:TIGR01612 1433 SEesniDTYFKNADENNENVLLLFKNIEMADNKSQHILKIKKDNATNDHDFNINELKEHI-----DKSKGCKDEADKNAK 1507
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 469 SLE-NKELTQETSDMTLELKNQ------QEDINNNKKQEERMLKQIENLQETETQLRNELEYVREELKQKRDEVK---CK 538
Cdd:TIGR01612 1508 AIEkNKELFEQYKKDVTELLNKysalaiKNKFAKTKKDSEIIIKEIKDAHKKFILEAEKSEQKIKEIKKEKFRIEddaAK 1587
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 539 LDKSEENCNNLRKQVEN-KNKY--IEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAK----QKFGEITDTYQK 611
Cdd:TIGR01612 1588 NDKSNKAAIDIQLSLENfENKFlkISDIKKKINDCLKETESIEKKISSFSIDSQDTELKENGDNlnslQEFLESLKDQKK 1667
|
490 500
....*....|....*....|....*...
gi 530363232 612 EIEDKKISEENLLEEVEKAKVIADEAVK 639
Cdd:TIGR01612 1668 NIEDKKKELDELDSEIEKIEIDVDQHKK 1695
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
396-748 |
7.88e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 40.00 E-value: 7.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 396 KQFEKIAEELKGTEQELIGLlqarEKEVHDLEIQLTAITTSEQYYSKEVKDLKTELENEKLKNTELTSHCNKLSLENKEL 475
Cdd:TIGR04523 40 KKLKTIKNELKNKEKELKNL----DKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKND 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 476 TQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQETETQLR---NELEYVREELKQKRDEVKCKLDKSEENCNNLRKQ 552
Cdd:TIGR04523 116 KEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNnkyNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNK 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 553 ----------VENKNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKISEEN 622
Cdd:TIGR04523 196 llklelllsnLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKE 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 623 LLEEVEKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKSKEQEQSSLRASLEIELSNLK 702
Cdd:TIGR04523 276 LEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSE 355
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 530363232 703 AELLSVKKQLEierEEKEKLKREAKENTATLKEKKDKKTQTFLLET 748
Cdd:TIGR04523 356 SENSEKQRELE---EKQNEIEKLKKENQSYKQEIKNLESQINDLES 398
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
245-739 |
9.04e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 39.77 E-value: 9.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 245 EEKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQIATKTICQLTE-----------------EKETQ 307
Cdd:pfam01576 4 EEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETELCAEAEEmrarlaarkqeleeilhELESR 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 308 MEESNKARAAHSFVVTEFETTVCSLEELLRTEQQ-----RLEKNEDQLKILTME------------LQKKSSELEEMTKL 370
Cdd:pfam01576 84 LEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAarqklQLEKVTTEAKIKKLEedillledqnskLSKERKLLEERISE 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 371 TNNKEVELEELKKVLGEKET--------LLYENKQFEKIAEELKGTEQELIGLLQAREKEVHDLEIQLTAITTSEQYYSK 442
Cdd:pfam01576 164 FTSNLAEEEEKAKSLSKLKNkheamisdLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEE 243
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 443 EVKDLKTELENEKLKNTELTSHCNKLSLENKELtqetsdmtlelknqQEDINNNKKQEERMLKQIENLQETETQLRNELE 522
Cdd:pfam01576 244 ELQAALARLEEETAQKNNALKKIRELEAQISEL--------------QEDLESERAARNKAEKQRRDLGEELEALKTELE 309
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 523 ------YVREELKQKRDEVKCKLDKS-EENCNNLRKQVEN----KNKYIEELQQENKALKKKGTAESKQLNVYEIKVNKL 591
Cdd:pfam01576 310 dtldttAAQQELRSKREQEVTELKKAlEEETRSHEAQLQEmrqkHTQALEELTEQLEQAKRNKANLEKAKQALESENAEL 389
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 530363232 592 ELELESAKQKFGEiTDTYQKEIEDKKISEENLLEEVEKAKV-IADEAVKLQKEIDkrcqhKIAEMVALMEKHKHQYDKII 670
Cdd:pfam01576 390 QAELRTLQQAKQD-SEHKRKKLEGQLQELQARLSESERQRAeLAEKLSKLQSELE-----SVSSLLNEAEGKNIKLSKDV 463
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 530363232 671 EERDSELGLYKSKEQEQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKREAKENTATLKEKKDK 739
Cdd:pfam01576 464 SSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDMKKK 532
|
|
| |
