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Conserved domains on  [gi|564375420|ref|XP_006247871|]
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UNC93-like protein MFSD11 isoform X1 [Rattus norvegicus]

Protein Classification

UNC93-like protein MFSD11( domain architecture ID 13024469)

unc-93-like protein MFSD11 belongs to the major facilitator superfamily (MFS) of transporters that facilitate the transport across cytoplasmic or internal membranes of one or more from a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_MFSD11 cd17407
UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed ...
11-436 0e+00

UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed of UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET) and similar proteins, most of which are uncharacterized. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. Its expression is affected by altered energy homeostasis, suggesting plausible involvement in the energy regulation. MFSD11 belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340965  Cd Length: 387  Bit Score: 631.99  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  11 IVILGVAFMFMFTAFQTCGNVAQTVIRSLN--STDFHGSGYTSLAIIYGVFSASNLITPSVVAIVGPQISMFVSGLFYSI 88
Cdd:cd17407    1 VIILGVAFMFIFTAFQTCGNIEQTVIKSLNqgNTTFHGSGYTSLAIIYGVFAASNWIAPSVVAVIGPKWSMVVGGLTYSL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  89 YIAVFIQPFPWSFYTASVFIGIAAAVLWTAQGNCLTINSDEHTIGRNSGIFWALLQSSLFFGNLYIYFAWQGKTQISEND 168
Cdd:cd17407   81 FIASFIQPMTWSLYTASVLLGIGAAVLWTGQGNFLTINSDSETIGRNSGIFWALLQCSLLFGNLYVYFAFQGKTTISDHD 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 169 RRTVFIALTVISLVGTVLFFLIRKPDPENvlgeedescddqdmeatesaqnnvtkavdafkkslrlcvtKEMLLLSVTTA 248
Cdd:cd17407  161 RRTVFIVLTVISLVGVVLLFLLRKPPSEP----------------------------------------KEMLLLSVTFA 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 249 YTGLELTFFSGVYGTCIGAVNKFGTEEKSLIGLSGIFIGIGEILGGSLFGLLSKN-SRFGRNPVVLLGTLVHFVAFYLIF 327
Cdd:cd17407  201 YTGLELTFFSGVYGTCIGNTNKFGEDAKSLIGLSGIFIGIGEILGGGLFGILGKKtNRFGRDPIVLLGFVVHLIAFYLIF 280
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 328 LNMPGDAPIApvEGTNSSAYIRPSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAVFKFVQSICAAVAFFYS 407
Cdd:cd17407  281 LNIPSDAPIA--EGTNDSAYIEPSAYVALFCSFLLGFGDSCFNTQIYSILGFMYPEDSAPAFALFKFVQSIAAAIAFFYS 358
                        410       420
                 ....*....|....*....|....*....
gi 564375420 408 NYLLLHWQLLVMVIFGFFGTISFFAVEWD 436
Cdd:cd17407  359 NYLLLQWQLLILVVFGFLGTISFFLVEWK 387
 
Name Accession Description Interval E-value
MFS_MFSD11 cd17407
UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed ...
11-436 0e+00

UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed of UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET) and similar proteins, most of which are uncharacterized. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. Its expression is affected by altered energy homeostasis, suggesting plausible involvement in the energy regulation. MFSD11 belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340965  Cd Length: 387  Bit Score: 631.99  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  11 IVILGVAFMFMFTAFQTCGNVAQTVIRSLN--STDFHGSGYTSLAIIYGVFSASNLITPSVVAIVGPQISMFVSGLFYSI 88
Cdd:cd17407    1 VIILGVAFMFIFTAFQTCGNIEQTVIKSLNqgNTTFHGSGYTSLAIIYGVFAASNWIAPSVVAVIGPKWSMVVGGLTYSL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  89 YIAVFIQPFPWSFYTASVFIGIAAAVLWTAQGNCLTINSDEHTIGRNSGIFWALLQSSLFFGNLYIYFAWQGKTQISEND 168
Cdd:cd17407   81 FIASFIQPMTWSLYTASVLLGIGAAVLWTGQGNFLTINSDSETIGRNSGIFWALLQCSLLFGNLYVYFAFQGKTTISDHD 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 169 RRTVFIALTVISLVGTVLFFLIRKPDPENvlgeedescddqdmeatesaqnnvtkavdafkkslrlcvtKEMLLLSVTTA 248
Cdd:cd17407  161 RRTVFIVLTVISLVGVVLLFLLRKPPSEP----------------------------------------KEMLLLSVTFA 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 249 YTGLELTFFSGVYGTCIGAVNKFGTEEKSLIGLSGIFIGIGEILGGSLFGLLSKN-SRFGRNPVVLLGTLVHFVAFYLIF 327
Cdd:cd17407  201 YTGLELTFFSGVYGTCIGNTNKFGEDAKSLIGLSGIFIGIGEILGGGLFGILGKKtNRFGRDPIVLLGFVVHLIAFYLIF 280
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 328 LNMPGDAPIApvEGTNSSAYIRPSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAVFKFVQSICAAVAFFYS 407
Cdd:cd17407  281 LNIPSDAPIA--EGTNDSAYIEPSAYVALFCSFLLGFGDSCFNTQIYSILGFMYPEDSAPAFALFKFVQSIAAAIAFFYS 358
                        410       420
                 ....*....|....*....|....*....
gi 564375420 408 NYLLLHWQLLVMVIFGFFGTISFFAVEWD 436
Cdd:cd17407  359 NYLLLQWQLLILVVFGFLGTISFFLVEWK 387
UNC-93 pfam05978
Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 ...
45-431 2.40e-146

Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 from Caenorhabditis elegans and also includes protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain- containing protein 11 or protein ET). UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. UNC-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons.


Pssm-ID: 461792 [Multi-domain]  Cd Length: 379  Bit Score: 422.12  E-value: 2.40e-146
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420   45 HGSGYTSLAIIYGVFSASNLITPSVVAIVGPQISMFVSGLFYSIYIAVFIQPFPWSFYTASVFIGIAAAVLWTAQGNCLT 124
Cdd:pfam05978   7 AYAGYYSLAIIYFFFTFACLIAPSIVDKLTPKWSMVIGAACYAIFQLGFLFLNSYYLYFSSALLGFGAAFLWTGQGSYLS 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  125 INSDEHTIGRNSGIFWALLQSSLFFGNLYIYFAWQGKTQ---ISENDRRTVFIALTVISLVGTVLFFLIRKPDPENVLGE 201
Cdd:pfam05978  87 ENSTRETIERNTSISWAMLQSSLIGGGIFLFIVFQSGGQgdeISDGQIKLLYSVFTAISIVGIVVFAFLPSPDYENVLSS 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  202 EDEScddqdmeatesaqnnvTKAVDAFKKSLRLCVTKEMLLLSVTTAYTGLELTFFSGVYGTCIGAVNKFGTEEKSLIGL 281
Cdd:pfam05978 167 KEKI----------------QSFADQFKSTFRLLRTPKMLLLAVFFFYTGLEVSFWTSIYPTCISFTSKLGTNTTYLIAI 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  282 SGIFIGIGEILGGSLFGLLSKNSR-FGRNPVVLLGTLVHFVAFYLIFLNMPGDAPIAPVEGTNSsaYIRPSKEVAILCSF 360
Cdd:pfam05978 231 YSISTGLGQIIGGIFFGPLGKRIRkFGRDPTILLGTLLHLVYFILIYLSFPNDAPLHPTDGPGL--LITPSLYLAFIISF 308
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564375420  361 LLGLGDSCFNTQLLSILGFLYSEDSAPAFAVFKFVQSICAAVAFFYSNYLLLHWQLLVMVIFGFFGTISFF 431
Cdd:pfam05978 309 LLGFSDACWNTQIYSILADAYPEDSSQAFAVFKFYQSIASCVAFFYSPYLTLYWHLLILTIFSIFATICFF 379
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
2-403 7.08e-03

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 38.42  E-value: 7.08e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420   2 SPESKKLFNIVILGVAFMFMFTAFQTCGNVAQTVIRSLNSTDFHGSGYTSLAIIygVFSASNLITPSVVAIVGPQISMFV 81
Cdd:COG2814    3 ATPRRRWLALLALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLL--GAALGAPLAGRLADRFGRRRVLLL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  82 SGLFYSI-YIAVFIQPFPWSFYTASVFIGIAAAVLWTAQGNCLTINSDEHTIGRNSGIFWALLQSSLFFGN-----LYIY 155
Cdd:COG2814   81 GLLLFALgSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPllgglLADL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 156 FAWqgktqisendrRTVFIALTVISLVGTVLFFLIRKpdpenvlgeedescddqdmeatESAQNNVTKAVDAFKKSLRLC 235
Cdd:COG2814  161 FGW-----------RWVFLVNAVLALLALLLLLRLLP----------------------ESRPAARARLRGSLRELLRRP 207
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 236 VTKEMLLLSVTTAYTGLELTFFSGVYgtcigAVNKFGTEEkSLIGLSGIFIGIGEILGGSLFGLLSKnsRFGRNPVVLLG 315
Cdd:COG2814  208 RLLLLLLLAFLLGFGFFALFTYLPLY-----LQEVLGLSA-SAAGLLLALFGLGGVLGALLAGRLAD--RFGRRRLLLIG 279
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 316 TLVHFVAFYLIFLNmpgdapiapvegtnssayirPSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAP-AFAVFKF 394
Cdd:COG2814  280 LLLLALGLLLLALA--------------------GSLWLLLLALFLLGFGFGLLFPLLQALVAELAPPEARGrASGLYNS 339

                 ....*....
gi 564375420 395 VQSICAAVA 403
Cdd:COG2814  340 AFFLGGPLA 348
 
Name Accession Description Interval E-value
MFS_MFSD11 cd17407
UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed ...
11-436 0e+00

UNC93-like Major facilitator superfamily domain-containing protein 11; This group is composed of UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET) and similar proteins, most of which are uncharacterized. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. Its expression is affected by altered energy homeostasis, suggesting plausible involvement in the energy regulation. MFSD11 belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340965  Cd Length: 387  Bit Score: 631.99  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  11 IVILGVAFMFMFTAFQTCGNVAQTVIRSLN--STDFHGSGYTSLAIIYGVFSASNLITPSVVAIVGPQISMFVSGLFYSI 88
Cdd:cd17407    1 VIILGVAFMFIFTAFQTCGNIEQTVIKSLNqgNTTFHGSGYTSLAIIYGVFAASNWIAPSVVAVIGPKWSMVVGGLTYSL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  89 YIAVFIQPFPWSFYTASVFIGIAAAVLWTAQGNCLTINSDEHTIGRNSGIFWALLQSSLFFGNLYIYFAWQGKTQISEND 168
Cdd:cd17407   81 FIASFIQPMTWSLYTASVLLGIGAAVLWTGQGNFLTINSDSETIGRNSGIFWALLQCSLLFGNLYVYFAFQGKTTISDHD 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 169 RRTVFIALTVISLVGTVLFFLIRKPDPENvlgeedescddqdmeatesaqnnvtkavdafkkslrlcvtKEMLLLSVTTA 248
Cdd:cd17407  161 RRTVFIVLTVISLVGVVLLFLLRKPPSEP----------------------------------------KEMLLLSVTFA 200
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 249 YTGLELTFFSGVYGTCIGAVNKFGTEEKSLIGLSGIFIGIGEILGGSLFGLLSKN-SRFGRNPVVLLGTLVHFVAFYLIF 327
Cdd:cd17407  201 YTGLELTFFSGVYGTCIGNTNKFGEDAKSLIGLSGIFIGIGEILGGGLFGILGKKtNRFGRDPIVLLGFVVHLIAFYLIF 280
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 328 LNMPGDAPIApvEGTNSSAYIRPSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAVFKFVQSICAAVAFFYS 407
Cdd:cd17407  281 LNIPSDAPIA--EGTNDSAYIEPSAYVALFCSFLLGFGDSCFNTQIYSILGFMYPEDSAPAFALFKFVQSIAAAIAFFYS 358
                        410       420
                 ....*....|....*....|....*....
gi 564375420 408 NYLLLHWQLLVMVIFGFFGTISFFAVEWD 436
Cdd:cd17407  359 NYLLLQWQLLILVVFGFLGTISFFLVEWK 387
UNC-93 pfam05978
Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 ...
45-431 2.40e-146

Ion channel regulatory protein UNC-93; The proteins in this family are represented by UNC-93 from Caenorhabditis elegans and also includes protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain- containing protein 11 or protein ET). UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. UNC-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons.


Pssm-ID: 461792 [Multi-domain]  Cd Length: 379  Bit Score: 422.12  E-value: 2.40e-146
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420   45 HGSGYTSLAIIYGVFSASNLITPSVVAIVGPQISMFVSGLFYSIYIAVFIQPFPWSFYTASVFIGIAAAVLWTAQGNCLT 124
Cdd:pfam05978   7 AYAGYYSLAIIYFFFTFACLIAPSIVDKLTPKWSMVIGAACYAIFQLGFLFLNSYYLYFSSALLGFGAAFLWTGQGSYLS 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  125 INSDEHTIGRNSGIFWALLQSSLFFGNLYIYFAWQGKTQ---ISENDRRTVFIALTVISLVGTVLFFLIRKPDPENVLGE 201
Cdd:pfam05978  87 ENSTRETIERNTSISWAMLQSSLIGGGIFLFIVFQSGGQgdeISDGQIKLLYSVFTAISIVGIVVFAFLPSPDYENVLSS 166
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  202 EDEScddqdmeatesaqnnvTKAVDAFKKSLRLCVTKEMLLLSVTTAYTGLELTFFSGVYGTCIGAVNKFGTEEKSLIGL 281
Cdd:pfam05978 167 KEKI----------------QSFADQFKSTFRLLRTPKMLLLAVFFFYTGLEVSFWTSIYPTCISFTSKLGTNTTYLIAI 230
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  282 SGIFIGIGEILGGSLFGLLSKNSR-FGRNPVVLLGTLVHFVAFYLIFLNMPGDAPIAPVEGTNSsaYIRPSKEVAILCSF 360
Cdd:pfam05978 231 YSISTGLGQIIGGIFFGPLGKRIRkFGRDPTILLGTLLHLVYFILIYLSFPNDAPLHPTDGPGL--LITPSLYLAFIISF 308
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 564375420  361 LLGLGDSCFNTQLLSILGFLYSEDSAPAFAVFKFVQSICAAVAFFYSNYLLLHWQLLVMVIFGFFGTISFF 431
Cdd:pfam05978 309 LLGFSDACWNTQIYSILADAYPEDSSQAFAVFKFYQSIASCVAFFYSPYLTLYWHLLILTIFSIFATICFF 379
MFS_unc93_like cd17338
Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is ...
11-436 5.62e-119

Unc-93 family of the Major Facilitator Superfamily of transporters; The Unc-93 family is composed of Caenorhabditis elegans uncoordinated protein 93 (also called putative potassium channel regulatory protein unc-93) and similar proteins including three vertebrate members: protein unc-93 homolog A (UNC93A), protein unc-93 homolog B1 (UNC93B1), and UNC93-like protein MFSD11 (also called major facilitator superfamily domain-containing protein 11 or protein ET). Unc-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. The human UNC93A gene is located in a region of the genome that is frequently associated with ovarian cancer, however, there is no evidence that UNC93A has a tumor suppressor function. UNC93B1 controls intracellular trafficking and transport of a subset of Toll-like receptors (TLRs), including TLR3, TLR7 and TLR9, from the endoplasmic reticulum to endolysosomes where they can engage pathogen nucleotides and activate signaling cascades. MFSD11 is ubiquitously expressed in the periphery and the central nervous system of mice, where it is expressed in excitatory and inhibitory mouse brain neurons. The unc93-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340896 [Multi-domain]  Cd Length: 388  Bit Score: 352.80  E-value: 5.62e-119
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  11 IVILGVAFMFMFTAFQTCGNVAQTVIRSlnstdfhGSGYTSLAIIYGVFSASNLITPSVVAIVGPQISMFVSGLFYSIYI 90
Cdd:cd17338    1 VIILSFGFLLIFLAYSALQNLQTSLHEN-------GLGSISLGILYSSFAVSSFIAPLLVKLLGEKITLVLGGLGYAIFI 73
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  91 AVFIQPFPWSFYTASVFIGIAAAVLWTAQGNCLTINSDEHTIGRNSGIFWALLQSSLFFGNLYIYFAWQGKTQISenDRR 170
Cdd:cd17338   74 ASNIFPIWGTLVPASIILGFAAAILWTAQGTYITRISDESNIGRNFGIFWSIFQLSQVFGNLISLALLNHSKGSS--GTT 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 171 TVFIALTVISLVGTVLFFLIRKPDPENVLGEEDeSCDDQDMEatesaqnnvtkAVDAFKKSLRLCVTKEMLLLSVTTAYT 250
Cdd:cd17338  152 ILFIVFMAIMLVGIILLFFLRGPDNEVITEIES-SSVGESME-----------KKNLFKLPFTLLKDKRFLLLIPLLIYS 219
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 251 GLELTFFSGVYGTCIGAVnkfgTEEKSLIGLSGIFIGIGEILGGSLFGLLSKNsRFGRNPVVLLGTLVHFVAFYLIFLNM 330
Cdd:cd17338  220 GLEQTFFSGVFTLIIGTP----TTGIARVGYVMAVYGFGDALGSLVAGLLSDW-RFGRIVLAVIGAFVHIASLILLFLSG 294
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 331 PGDapiapvegtnssAYIRPSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAPAFAVFKFVQSICAAVAFFYSNYL 410
Cdd:cd17338  295 NVT------------PYGLGGSWLAYVSAILWGLGDAIFNTQIYALLGSLYENDSESAFAVYKLWQSIATAIAYFLSPYL 362
                        410       420
                 ....*....|....*....|....*.
gi 564375420 411 LLHWQLLVMVIFGFFGTISFFAVEWD 436
Cdd:cd17338  363 PLFVKLFVLLALLILLAIFFLFVELK 388
MFS_unc93A_like cd17406
Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of ...
11-435 1.52e-33

Protein unc-93 homolog A and similar proteins of the Major Facilitator Superfamily of transporters; This subfamily is composed of Caenorhabditis elegans Uncoordinated protein 93 (also called putative potassium channel regulatory protein unc-93), human protein unc-93 homolog A (HmUnc-93A or UNC93A), and similar proteins. Unc-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. The human UNC93A gene is located in a region of the genome that is frequently associated with ovarian cancer, however, there is no evidence that UNC93A has a tumor suppressor function. This unc93A-like subfamily belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340964 [Multi-domain]  Cd Length: 390  Bit Score: 130.07  E-value: 1.52e-33
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  11 IVILGVAFMFMFTAFQTCGNVaQTvirSLNSTDfhGSGYTSLAIIYGVFSASNLITPSVV-AIVGPQISMFVSGLFYSIY 89
Cdd:cd17406    1 LLVISFAFLLLFTAFQGLQNL-QS---SLNSDD--GLGVVSLSVIYASLIVSCMFLPPLLiKKLGCKWTIVLSMFCYVLY 74
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  90 IAVFIQPFPWSFYTASVFIGIAAAVLWTAQGNCLTINSDEHT----------IGRNSGIFWALLQSSLFFGNLYIYFAWQ 159
Cdd:cd17406   75 IAANFYPSWYTLIPASIILGFGAAPLWSAKCTYLTESGNRYAkltgksgddvINRFFGIFFMIFQSSQIWGNLISSLVFS 154
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 160 GKTQISENDRRTVFIALTVIslvgTVLFFLirkpDPENVLGEEDEscddqdmeatesaQNNVTKAVDAFKKSLRLCVTKE 239
Cdd:cd17406  155 QSLIYTLLGIYLGCGILAVI----IVAVFL----DPLKRDKEKRK-------------QETKFSVLSLLLATFKHLKDPR 213
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 240 MLLLSVTTAYTGLELTFFSGVYG----TCIGAVNKfgteekslIGLSGIFIGIGEILGGSLFGLLSKnsRFGRNPVVLLG 315
Cdd:cd17406  214 QLLLIPLTIYSGLEQAFLSGDFTksyvTCALGIWN--------VGYVMICFGVVNALCSFLFGRLVK--YTGRIPLFALG 283
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 316 TLVHFVAFYLIFLNMPgdapiapvegtnssayiRPSkEVAILCSF--LLGLGDSCFNTQLLSILGFLYSEDSAPAFAVFK 393
Cdd:cd17406  284 ALVNLGLIIALLLWEP-----------------DPD-QLAIFFVFagLWGMADAVWQTQINALYGVLFPKNKEAAFSNYR 345
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|..
gi 564375420 394 FVQSICAAVAFFYSNYLLLHWQLLVMVIFGFFGTISFFAVEW 435
Cdd:cd17406  346 LWESLGFVIAFAYSNFLCVYVKLYILLAVLLLGMVGYGVVEY 387
MFS_unc93-like cd06178
Uncharacterized Unc-93-like proteins of the Major Facilitator Superfamily of transporters; ...
9-418 1.11e-11

Uncharacterized Unc-93-like proteins of the Major Facilitator Superfamily of transporters; This subfamily consists of uncharacterized proteins, mainly from fungi and plants, with similarity to Caenorhabditis elegans uncoordinated protein 93 (also called putative potassium channel regulatory protein unc-93). Unc-93 acts as a regulatory subunit of a multi-subunit potassium channel complex that may function in coordinating muscle contraction in C. elegans. The unc93-like subfamily belongs to the Unc-93 family of the Major Facilitator Superfamily (MFS) of transporters. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340867  Cd Length: 415  Bit Score: 66.16  E-value: 1.11e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420   9 FNIVILG-VAFMF--MFTAFQTCG---NVAQTVIRSLNstdfhgsgytslAIIYGVFSASNLITPSVVAIVGPQISMFVS 82
Cdd:cd06178    1 TQVVLVGlVCFCCpgMFNALTGLGgggQVDPTVANNAN------------TALYATFAVFGFFGGGIFNLLGPRLTLAFG 68
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  83 GLFYSIYIAVF----IQPFPWSFYTASVFIGIAAAVLWTAQGNCLTINSDEHTIGRNSGIFWALLQSSLFFGNLYIYFAW 158
Cdd:cd06178   69 GTGYPLYAGSLlsynHVQNQGFVIFAGAILGIGAGLLWTAQGAIMLSYPTENQKGRFIAIFWVIFNLGGVIGSLIPFGLN 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 159 QGKTQISENDrrTVFIALTVISLVGTVL-FFLIrkpDPENVLGEEDESCddqdmeateSAQNNVTKAVDAFKKSLRLCVT 237
Cdd:cd06178  149 YHSTSATVND--ATYIAFIVLMAVGAVLaLLLL---DPPKVVRKDGGRV---------AAIKSATWVSEELKLLLKLFKD 214
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 238 KEMLLLS----VTTAYTGLELTFFSGVYgtcigavnkFGTEEKSLIGLsgIFIGIgEILGGSLFGLLSKNSRFGRNPVVL 313
Cdd:cd06178  215 PKMLLLFpaffASNWFYTYQFNGVNGYL---------FNLRTRSLNNV--LYWGA-QMFGAYVIGYLLDAKFMSRRTRAF 282
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 314 LGTLVHFVAF--------YLIFLNMPGDA-PIAPVEGTNSSAYIRPskevAILCSFlLGLGDSCFNTQLLSILGFLYSED 384
Cdd:cd06178  283 IGLAIVFVIGmaiwggglAFQLSYTRDDVkPTPKIDDKTGRRYAGP----FVLYLF-YGILDAIYQTYVYWTMGALSNDP 357
                        410       420       430       440
                 ....*....|....*....|....*....|....*....|...
gi 564375420 385 SAPA-FA-VFKFVQSICAAVAFF-------YSNYLLLHWQLLV 418
Cdd:cd06178  358 RKLArYAgFYKGIQSAGAAIAWRldalkvsYMTQLIICWVLLA 400
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
46-328 1.69e-04

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 43.72  E-value: 1.69e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  46 GSGYTSLAIIYGVFSASNLITPSVVAI----VGPQISMFVSGLFYSI-YIAVFIQPFPWSFYTASVFIGIAAAVLWTAQG 120
Cdd:cd17325   27 GASVAQIGLIVAAYALAQLLFSPPAGRlsdrFGRKRLLLLGLLLLAVsTLLFAFATSYWQLLLARFLQGLASAAVWPAAM 106
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 121 NCLTINSDEHTIGRNSGIFWALLQSSLFFGNL---YIYFAWqgktqisenDRRTVFIALTVISLVGTVLFFLIRKPDPEn 197
Cdd:cd17325  107 ALIADIAPPEERGRAMGIFSSAIGLGFLIGPLlggLLADAL---------GYRAPFLVCAALALLALVLALLLLPEPRP- 176
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 198 vlgeedescddqdmeateSAQNNVTKAVDAFKKSLRLCVTKEMLLLSVTTAYTGLELTFFSGVYGTCIGAVNKFGTeekS 277
Cdd:cd17325  177 ------------------PPNKRAVSAARLRSGLRLLLRDRRLLALFLAIFVLAFAFGALEPFLPLYAAELGGLSP---A 235
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|.
gi 564375420 278 LIGLSGIFIGIGEILGGSLFGLLSknSRFGRNPVVLLGTLVHFVAFYLIFL 328
Cdd:cd17325  236 QIGLLFGAQGLASALSQPPAGKLS--DRIGRKPLILIGLLLSAVALLLLPL 284
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
2-403 7.08e-03

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 38.42  E-value: 7.08e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420   2 SPESKKLFNIVILGVAFMFMFTAFQTCGNVAQTVIRSLNSTDFHGSGYTSLAIIygVFSASNLITPSVVAIVGPQISMFV 81
Cdd:COG2814    3 ATPRRRWLALLALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLL--GAALGAPLAGRLADRFGRRRVLLL 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420  82 SGLFYSI-YIAVFIQPFPWSFYTASVFIGIAAAVLWTAQGNCLTINSDEHTIGRNSGIFWALLQSSLFFGN-----LYIY 155
Cdd:COG2814   81 GLLLFALgSLLCALAPSLWLLLAARFLQGLGAGALFPAALALIADLVPPERRGRALGLLGAGLGLGPALGPllgglLADL 160
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 156 FAWqgktqisendrRTVFIALTVISLVGTVLFFLIRKpdpenvlgeedescddqdmeatESAQNNVTKAVDAFKKSLRLC 235
Cdd:COG2814  161 FGW-----------RWVFLVNAVLALLALLLLLRLLP----------------------ESRPAARARLRGSLRELLRRP 207
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 236 VTKEMLLLSVTTAYTGLELTFFSGVYgtcigAVNKFGTEEkSLIGLSGIFIGIGEILGGSLFGLLSKnsRFGRNPVVLLG 315
Cdd:COG2814  208 RLLLLLLLAFLLGFGFFALFTYLPLY-----LQEVLGLSA-SAAGLLLALFGLGGVLGALLAGRLAD--RFGRRRLLLIG 279
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 564375420 316 TLVHFVAFYLIFLNmpgdapiapvegtnssayirPSKEVAILCSFLLGLGDSCFNTQLLSILGFLYSEDSAP-AFAVFKF 394
Cdd:COG2814  280 LLLLALGLLLLALA--------------------GSLWLLLLALFLLGFGFGLLFPLLQALVAELAPPEARGrASGLYNS 339

                 ....*....
gi 564375420 395 VQSICAAVA 403
Cdd:COG2814  340 AFFLGGPLA 348
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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