|
Name |
Accession |
Description |
Interval |
E-value |
| FMO-like |
pfam00743 |
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone ... |
2-531 |
0e+00 |
|
Flavin-binding monooxygenase-like; This family includes FMO proteins, cyclohexanone mono-oxygenase and a number of different mono-oxygenases.
Pssm-ID: 395602 [Multi-domain] Cd Length: 531 Bit Score: 915.71 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 2 GKKVAIVGAGVSGLAAIRCCLEEGLDPICFERSIDVGGLWKFSSHAEEGRASIYQSVFTNSSKEMMCFPDFPYPDDFPNY 81
Cdd:pfam00743 1 AKKVAVIGAGVSGLASIKCCLEEGLEPTCFERSDDIGGLWRFTENVEEGRASIYKSVITNTSKEMSCFSDFPFPEDYPNF 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 82 MHHSKLQEYITSFAQKKGLLRYIQFETLVSSIKKCSSFLTTGQWVVVTEKEGKQESVLFDAVMICSGHHVYPNMPTDSFP 161
Cdd:pfam00743 81 MHNSKFLEYFRMFAKEFDLLKYIQFKTTVCSVKKRPDFSTSGQWEVVTEHEGKQESAVFDAVMVCTGHHTNPHLPLESFP 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 162 GLEHFRGKCLHSRDYKGPGAFQGKKVLVIGLGNSASDIAVELSRLATQVIISTRSGSWIMSRVWNDGYPWDMVYVTRFTS 241
Cdd:pfam00743 161 GIEKFKGQYFHSRDYKHPEGFTGKRVLVIGIGNSGGDIAVELSHTAAQVFLSTRRGSWVLSRVSDHGYPWDMLFSTRFTS 240
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 242 FLRNILPSFVSDWLYIKKMNTWFKHENYGLMPLNGPLRKEPVFNDELPSRILCGMVTIKPIVTKFTETSAVFEDGTVFEA 321
Cdd:pfam00743 241 FLRNILPTSISNWLMEKQMNRRFNHENYGLKPKNRALSKEPVVNDDLPNRILCGAVKVKPNVKEFTETSAIFEDGTVEED 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 322 IDCVIFATGYGYAYPFLDDSIIKSRNNEVTLYKGIFPPQLEKPTMAVIGLVQSLGAAIPTADLQARWAAKVFTNTCVLPT 401
Cdd:pfam00743 321 IDVVIFATGYTFAFPFLEESLVKVENNKVSLYKYVFPPNLEKPTLAIIGLIQPLGSIIPTVELQARWATRVFKGLCTLPS 400
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 402 TNEMMDDIDEKMGKKLKWFG--QSHTLQTDYITYMDELSSFIGAKPNIPWLFLTDPQLALEVYFGPCSPYQFRLMGPGKW 479
Cdd:pfam00743 401 QSEMMAEINKRQEKKIKRFGdsQSHTIQTDYIDYMDELALFIGAKPNLLSLLLTDPKLALKLFFGPCTPYQYRLVGPGKW 480
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 568910720 480 DGARNAILTQWKRTVKPTRTRAVGEAQRPRHLYdLLRMLFFPVFFLAVLLTF 531
Cdd:pfam00743 481 EGARNAILTQWDRILKPLKTRVVEKSSSPASSF-TLKIFGLPVVLVAIFLIL 531
|
|
| CzcO |
COG2072 |
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ... |
5-390 |
2.13e-85 |
|
Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD [Inorganic ion transport and metabolism];
Pssm-ID: 441675 [Multi-domain] Cd Length: 414 Bit Score: 270.20 E-value: 2.13e-85
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 5 VAIVGAGVSGLAAIRCCLEEGLDPICFERSIDVGGLWkfsshaeegRASIYQSVFTNSSKEMMCFPDFPYPDDFPNYMHH 84
Cdd:COG2072 9 VVVIGAGQAGLAAAYHLRRAGIDFVVLEKADDVGGTW---------RDNRYPGLRLDTPSHLYSLPFFPNWSDDPDFPTG 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 85 SKLQEYITSFAQKKGLLRYIQFETLVSSIKKCSsflTTGQWVVVTEKEgkqESVLFDAVMICSGHHVYPNMPtdSFPGLE 164
Cdd:COG2072 80 DEILAYLEAYADKFGLRRPIRFGTEVTSARWDE---ADGRWTVTTDDG---ETLTARFVVVATGPLSRPKIP--DIPGLE 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 165 HFRGKCLHSRDYKGPGAFQGKKVLVIGLGNSASDIAVELSRLATQVIISTRSGSWIMSRvwnDGYPWDMvyvTRFTSFLR 244
Cdd:COG2072 152 DFAGEQLHSADWRNPVDLAGKRVLVVGTGASAVQIAPELARVAAHVTVFQRTPPWVLPR---PNYDPER---GRPANYLG 225
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 245 NILPSFVSD----WLYIKKMNTWFKHENYG-LMPLNGPLRKEPVFNDELPSRILCGMVTIK-PIVTKFTETSAVFEDGTV 318
Cdd:COG2072 226 LEAPPALNRrdarAWLRRLLRAQVKDPELGlLTPDYPPGCKRPLLSTDYYEALRRGNVELVtGGIERITEDGVVFADGTE 305
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568910720 319 FEAiDCVIFATGYGYAYPFLDDSIIKSRN--NEVTLYKGIFPPQLekPTMAVIGLVQSLGAA--IPTADLQARWAA 390
Cdd:COG2072 306 HEV-DVIVWATGFRADLPWLAPLDVRGRDgrSGPRAYLGVVVPGF--PNLFFLGPNSPSGHSslTLGAERQARYIA 378
|
|
| PLN02172 |
PLN02172 |
flavin-containing monooxygenase FMO GS-OX |
3-440 |
3.06e-50 |
|
flavin-containing monooxygenase FMO GS-OX
Pssm-ID: 215116 [Multi-domain] Cd Length: 461 Bit Score: 178.90 E-value: 3.06e-50
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 3 KKVAIVGAGVSGLAAIRCCLEEGLDPICFERSIDVGGLWKFSSHAEEG-----------RASIYQSVFTNSSKEMMCFPD 71
Cdd:PLN02172 11 QHVAVIGAGAAGLVAARELRREGHTVVVFEREKQVGGLWVYTPKSESDplsldptrsivHSSVYESLRTNLPRECMGYRD 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 72 FPY---PDDFPN----YMHHSKLQEYITSFAQKKGLLRYIQFETLVSSIKKcssflTTGQWVVVTEKEGK-QESVLFDAV 143
Cdd:PLN02172 91 FPFvprFDDESRdsrrYPSHREVLAYLQDFAREFKIEEMVRFETEVVRVEP-----VDGKWRVQSKNSGGfSKDEIFDAV 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 144 MICSGHHVYPNMPtdSFPGLEHFRGKCLHSRDYKGPGAFQGKKVLVIGLGNSASDIAVELSRLATQVIISTRSGswimsr 223
Cdd:PLN02172 166 VVCNGHYTEPNVA--HIPGIKSWPGKQIHSHNYRVPDPFKNEVVVVIGNFASGADISRDIAKVAKEVHIASRAS------ 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 224 vwndgypwdmvyvtrftsflrnilPSFVSDWLYIKKMNTWFKHEnyglmplngplrkepvfndelpsrilcgmvtikpIV 303
Cdd:PLN02172 238 ------------------------ESDTYEKLPVPQNNLWMHSE----------------------------------ID 259
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 304 TKFTETSAVFEDGTVFEAiDCVIFATGYGYAYPFLD-DSIIKSRNNEVT-LYKGIFPPQLeKPTMAVIGLvQSLGAAIPT 381
Cdd:PLN02172 260 TAHEDGSIVFKNGKVVYA-DTIVHCTGYKYHFPFLEtNGYMRIDENRVEpLYKHVFPPAL-APGLSFIGL-PAMGIQFVM 336
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568910720 382 ADLQARWAAKVFTNTCVLPTTNEMMDDIDEKMGkKLKWFGQ----SHTL---QTDYITYMDELSSF 440
Cdd:PLN02172 337 FEIQSKWVAAVLSGRVTLPSEDKMMEDINAWYA-SLEALGIpkryTHKLgkiQSEYLNWIAEECGC 401
|
|
| Pyr_redox_3 |
pfam13738 |
Pyridine nucleotide-disulphide oxidoreductase; |
75-357 |
4.13e-15 |
|
Pyridine nucleotide-disulphide oxidoreductase;
Pssm-ID: 404603 [Multi-domain] Cd Length: 296 Bit Score: 76.11 E-value: 4.13e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 75 PDDFPNYMHHSKLQ--EYITSFAQKKGLLryIQFETLVSSIKK-CSSFlttgqwVVVTEKEgkqesvLFDA--VMICSGH 149
Cdd:pfam13738 63 PAFTFNREHPSGNEyaEYLRRVADHFELP--INLFEEVTSVKKeDDGF------VVTTSKG------TYQAryVIIATGE 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 150 HVYPNMPtdsfpgleHFRGKCLHSRDYKGPGAFQGKKVLVIGLGNSASDIAVELSRLATQVIISTRSGSWimsrvwndgy 229
Cdd:pfam13738 129 FDFPNKL--------GVPELPKHYSYVKDFHPYAGQKVVVIGGYNSAVDAALELVRKGARVTVLYRGSEW---------- 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 230 pwdmvyvtrftsflrNILPSFVSDWL--YIK-KMNTWFKHENYGLmplngplrkepVFNDElpsrilcgmvtikpiVTKF 306
Cdd:pfam13738 191 ---------------EDRDSDPSYSLspDTLnRLEELVKNGKIKA-----------HFNAE---------------VKEI 229
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568910720 307 TETSAV----FEDGTVFEAIDCVIFATGYGYAYPFLDDSIIKSRNN---------EVTLYKGIF 357
Cdd:pfam13738 230 TEVDVSykvhTEDGRKVTSNDDPILATGYHPDLSFLKKGLFELDEDgrpvlteetESTNVPGLF 293
|
|
| TrxB |
COG0492 |
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones]; |
4-215 |
2.51e-10 |
|
Thioredoxin reductase [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440258 [Multi-domain] Cd Length: 305 Bit Score: 61.67 E-value: 2.51e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 4 KVAIVGAGVSGLAAIRCCLEEGLDPICFERSiDVGG-LWKFSShaeegrasIYqsvftNsskemmcFPDFPYPDDFPNYM 82
Cdd:COG0492 2 DVVIIGAGPAGLTAAIYAARAGLKTLVIEGG-EPGGqLATTKE--------IE-----N-------YPGFPEGISGPELA 60
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 83 HHSKLQeyitsfAQKKGLlRYIqfETLVSSIKKcssflTTGQWVVVTEKEgkqESVLFDAVMICSGhhVYPNMPtdSFPG 162
Cdd:COG0492 61 ERLREQ------AERFGA-EIL--LEEVTSVDK-----DDGPFRVTTDDG---TEYEAKAVIIATG--AGPRKL--GLPG 119
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 568910720 163 LEHFRGKCLHsrdY----KGPgAFQGKKVLVIGLGNSASDIAVELSRLATQVIISTR 215
Cdd:COG0492 120 EEEFEGRGVS---YcatcDGF-FFRGKDVVVVGGGDSALEEALYLTKFASKVTLIHR 172
|
|
| YdhS |
COG4529 |
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only]; |
3-238 |
8.70e-08 |
|
Uncharacterized NAD(P)/FAD-binding protein YdhS [General function prediction only];
Pssm-ID: 443597 [Multi-domain] Cd Length: 466 Bit Score: 54.58 E-value: 8.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 3 KKVAIVGAGVSGLAAIRCCLEEGLDPIC---FERSIDVGglwkfsshaeEGRAsiYQsvfTNS--------SKEMmcFPD 71
Cdd:COG4529 6 KRIAIIGGGASGTALAIHLLRRAPEPLRitlFEPRPELG----------RGVA--YS---TDSpehllnvpAGRM--SAF 68
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 72 FPYPDDFPNYMHHSKLQ-----------------EYITSF-------AQKKGLLRYIQFEtlVSSIKKcssflTTGQWVV 127
Cdd:COG4529 69 PDDPDHFLRWLRENGARaapaidpdafvprrlfgEYLRERlaealarAPAGVRLRHIRAE--VVDLER-----DDGGYRV 141
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 128 VTEkEGkqESVLFDAVMICSGHHVypnmPTDsfPGLEHFRGKCLHSRDYKgPGAF----QGKKVLVIGLGNSASDIAVEL 203
Cdd:COG4529 142 TLA-DG--ETLRADAVVLATGHPP----PAP--PPGLAAGSPRYIADPWP-PGALaripPDARVLIIGTGLTAIDVVLSL 211
|
250 260 270
....*....|....*....|....*....|....*...
gi 568910720 204 SRLATQ---VIIStRSGswIMSRVWNDGYPWDMVYVTR 238
Cdd:COG4529 212 AARGHRgpiTALS-RRG--LLPRAHPPGAPLPLKFLTP 246
|
|
| Pyr_redox_2 |
pfam07992 |
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II ... |
3-331 |
2.63e-06 |
|
Pyridine nucleotide-disulphide oxidoreductase; This family includes both class I and class II oxidoreductases and also NADH oxidases and peroxidases. This domain is actually a small NADH binding domain within a larger FAD binding domain.
Pssm-ID: 400379 [Multi-domain] Cd Length: 301 Bit Score: 49.24 E-value: 2.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 3 KKVAIVGAGVSGLAAIRCCLEEGLDPICfersIDVGGLWKfsshaeeGRASIYQSVFTNSSKemmcfpDFPYPDDFPNYM 82
Cdd:pfam07992 1 YDVVVIGGGPAGLAAALTLAQLGGKVTL----IEDEGTCP-------YGGCVLSKALLGAAE------APEIASLWADLY 63
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 83 HHskLQEYITSFAQK-KGLLryiqfETLVSSIkkcssFLTTGQWVVVTEKEGKQESVLFDAVMICSGHHvyPNMPTdsFP 161
Cdd:pfam07992 64 KR--KEEVVKKLNNGiEVLL-----GTEVVSI-----DPGAKKVVLEELVDGDGETITYDRLVIATGAR--PRLPP--IP 127
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 162 GLEHFRGKclHSRDYKGPGAFQ----GKKVLVIGLGNSASDIAVELSRLATQVIISTRSgswimsrvwndgypwdmvyvt 237
Cdd:pfam07992 128 GVELNVGF--LVRTLDSAEALRlkllPKRVVVVGGGYIGVELAAALAKLGKEVTLIEAL--------------------- 184
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 238 rftSFLRNILPSFVSDWL--YIKKMNTWFKHEnyglmplngplrkepvfndelpsrilcgmVTIKPIVTKFTETSAVFED 315
Cdd:pfam07992 185 ---DRLLRAFDEEISAALekALEKNGVEVRLG-----------------------------TSVKEIIGDGDGVEVILKD 232
|
330
....*....|....*.
gi 568910720 316 GTVFEAiDCVIFATGY 331
Cdd:pfam07992 233 GTEIDA-DLVVVAIGR 247
|
|
| HemY |
COG1232 |
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen ... |
3-40 |
4.25e-06 |
|
Protoporphyrinogen oxidase HemY/PPOX [Coenzyme transport and metabolism]; Protoporphyrinogen oxidase HemY/PPOX is part of the Pathway/BioSystem: Heme biosynthesis
Pssm-ID: 440845 [Multi-domain] Cd Length: 443 Bit Score: 49.06 E-value: 4.25e-06
10 20 30
....*....|....*....|....*....|....*...
gi 568910720 3 KKVAIVGAGVSGLAAIRCCLEEGLDPICFERSIDVGGL 40
Cdd:COG1232 2 KRVAVIGGGIAGLTAAYRLAKAGHEVTVLEASDRVGGL 39
|
|
| GltD |
COG0493 |
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport ... |
2-212 |
5.23e-06 |
|
NADPH-dependent glutamate synthase beta chain or related oxidoreductase [Amino acid transport and metabolism, General function prediction only]; NADPH-dependent glutamate synthase beta chain or related oxidoreductase is part of the Pathway/BioSystem: Glutamine biosynthesis
Pssm-ID: 440259 [Multi-domain] Cd Length: 434 Bit Score: 48.98 E-value: 5.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 2 GKKVAIVGAGVSGLAA----IRccleEGLDPICFERSIDVGGlwkfsshaeegrasiyqsvftnsskeMMCF--PDFPYP 75
Cdd:COG0493 121 GKKVAVVGSGPAGLAAayqlAR----AGHEVTVFEALDKPGG--------------------------LLRYgiPEFRLP 170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 76 DDFpnymhhskLQEYItsfaqkKGLLRY-IQFETlvssikkcssflttGQWV--VVTEKEGKQEsvlFDAVMICSGHHVY 152
Cdd:COG0493 171 KDV--------LDREI------ELIEALgVEFRT--------------NVEVgkDITLDELLEE---FDAVFLATGAGKP 219
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 153 PNMPtdsFPGlEHFRGkCLHSRDY-------KGPGAF--QGKKVLVIGLGNSASDIAVELSRL-ATQVII 212
Cdd:COG0493 220 RDLG---IPG-EDLKG-VHSAMDFltavnlgEAPDTIlaVGKRVVVIGGGNTAMDCARTALRLgAESVTI 284
|
|
| PRK12770 |
PRK12770 |
putative glutamate synthase subunit beta; Provisional |
2-215 |
6.86e-05 |
|
putative glutamate synthase subunit beta; Provisional
Pssm-ID: 237197 [Multi-domain] Cd Length: 352 Bit Score: 44.98 E-value: 6.86e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 2 GKKVAIVGAGVSGLAA---IRCcleEGLDPICFERSIDVGGLWKFSSH-----AEEGRASIYQ-----SVFTNSSKEMmc 68
Cdd:PRK12770 18 GKKVAIIGAGPAGLAAagyLAC---LGYEVHVYDKLPEPGGLMLFGIPefripIERVREGVKEleeagVVFHTRTKVC-- 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 69 fpdfpypddFPNYMHHSKLQEYITsfaqkkgllRYIQFETLVSSikkcssflttgqwvvvtekegkqesvlFDAVMICSG 148
Cdd:PRK12770 93 ---------CGEPLHEEEGDEFVE---------RIVSLEELVKK---------------------------YDAVLIATG 127
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 568910720 149 HHV--YPNMPTDSFPG-------LEHFRGKCLHSRDYKGPGAFQGKKVLVIGLGNSASDIAVELSRL-ATQVIISTR 215
Cdd:PRK12770 128 TWKsrKLGIPGEDLPGvysaleyLFRIRAAKLGYLPWEKVPPVEGKKVVVVGAGLTAVDAALEAVLLgAEKVYLAYR 204
|
|
| MurD |
COG0771 |
UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell wall/membrane/envelope biogenesis]; ... |
2-34 |
1.82e-04 |
|
UDP-N-acetylmuramoylalanine-D-glutamate ligase [Cell wall/membrane/envelope biogenesis]; UDP-N-acetylmuramoylalanine-D-glutamate ligase is part of the Pathway/BioSystem: Mureine biosynthesis
Pssm-ID: 440534 [Multi-domain] Cd Length: 445 Bit Score: 43.92 E-value: 1.82e-04
10 20 30
....*....|....*....|....*....|...
gi 568910720 2 GKKVAIVGAGVSGLAAIRCCLEEGLDPICFERS 34
Cdd:COG0771 4 GKKVLVLGLGKSGLAAARLLAKLGAEVTVSDDR 36
|
|
| PRK07233 |
PRK07233 |
hypothetical protein; Provisional |
4-40 |
4.09e-04 |
|
hypothetical protein; Provisional
Pssm-ID: 235977 [Multi-domain] Cd Length: 434 Bit Score: 42.95 E-value: 4.09e-04
10 20 30
....*....|....*....|....*....|....*..
gi 568910720 4 KVAIVGAGVSGLAAIRCCLEEGLDPICFERSIDVGGL 40
Cdd:PRK07233 1 KIAIVGGGIAGLAAAYRLAKRGHEVTVFEADDQLGGL 37
|
|
| COG3380 |
COG3380 |
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]; |
1-145 |
7.76e-04 |
|
Predicted NAD/FAD-dependent oxidoreductase [General function prediction only];
Pssm-ID: 442607 [Multi-domain] Cd Length: 331 Bit Score: 41.79 E-value: 7.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 1 MGKKVAIVGAGVSGLAAIRCCLEEGLDPICFERSIDVGGlwKFSS-HAEEGRASIYQSVFTNSSkemmcfPDF------- 72
Cdd:COG3380 2 SMPDIAIIGAGIAGLAAARALQDAGHEVTVFEKSRGVGG--RMATrRLDGGRFDHGAQYFTARD------PRFqalveew 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 73 -------PYPDDFPNYMHHSKLQE-------YI-----TSFAqkKGLLR--YIQFETLVSSIKKcssflTTGQWVVVTEK 131
Cdd:COG3380 74 laaglvaPWTFDFVVLDADGLVSPrddgeprYVgvpgmNALA--KHLAAglDVRLGTRVTALER-----DGDGWRLTDED 146
|
170
....*....|....
gi 568910720 132 EgkQESVLFDAVMI 145
Cdd:COG3380 147 G--EEYGPFDAVVL 158
|
|
| COG3349 |
COG3349 |
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function ... |
1-39 |
1.05e-03 |
|
Uncharacterized protein, contains NAD-binding domain and a Fe-S cluster [General function prediction only];
Pssm-ID: 442577 [Multi-domain] Cd Length: 445 Bit Score: 41.76 E-value: 1.05e-03
10 20 30 40
....*....|....*....|....*....|....*....|
gi 568910720 1 MGKKVAIVGAGVSGL-AAIRCClEEGLDPICFERSIDVGG 39
Cdd:COG3349 2 MPPRVVVVGGGLAGLaAAVELA-EAGFRVTLLEARPRLGG 40
|
|
| PRK12769 |
PRK12769 |
putative oxidoreductase Fe-S binding subunit; Reviewed |
2-43 |
1.14e-03 |
|
putative oxidoreductase Fe-S binding subunit; Reviewed
Pssm-ID: 183733 [Multi-domain] Cd Length: 654 Bit Score: 41.66 E-value: 1.14e-03
10 20 30 40
....*....|....*....|....*....|....*....|..
gi 568910720 2 GKKVAIVGAGVSGLAAIRCCLEEGLDPICFERSIDVGGLWKF 43
Cdd:PRK12769 327 DKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTF 368
|
|
| NAD_binding_9 |
pfam13454 |
FAD-NAD(P)-binding; |
6-149 |
1.33e-03 |
|
FAD-NAD(P)-binding;
Pssm-ID: 433222 [Multi-domain] Cd Length: 155 Bit Score: 39.57 E-value: 1.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 6 AIVGAGVSGLAA----IRCCLEEGLDPICFERS-IDVGGLWkFSSHAEEGRasiyqsvfTNS-SKEMMCFPDfpYPDDFP 79
Cdd:pfam13454 1 AIVGGGPSGLALlerlLARAPKRPLEITLFDPSpPGAGGVY-RTDQSPEHL--------LNVpASRMSLFPD--DPPHFL 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568910720 80 NYMHHSKLQEYIT-----SFAQKKGLLRYIQ--FETLVS------SIKKCSSFLT------TGQWVVVTekegKQESVLF 140
Cdd:pfam13454 70 EWLRARGALDEAPgldpdDFPPRALYGRYLRdrFEEALArapagvTVRVHRARVTdlrprgDGYRVLLA----DGRTLAA 145
|
....*....
gi 568910720 141 DAVMICSGH 149
Cdd:pfam13454 146 DAVVLATGH 154
|
|
| gltD |
PRK12810 |
glutamate synthase subunit beta; Reviewed |
2-40 |
1.47e-03 |
|
glutamate synthase subunit beta; Reviewed
Pssm-ID: 237213 [Multi-domain] Cd Length: 471 Bit Score: 41.30 E-value: 1.47e-03
10 20 30 40
....*....|....*....|....*....|....*....|...
gi 568910720 2 GKKVAIVGAGVSGLAA----IRCcleeGLDPICFERSIDVGGL 40
Cdd:PRK12810 143 GKKVAVVGSGPAGLAAadqlARA----GHKVTVFERADRIGGL 181
|
|
| NAD_binding_8 |
pfam13450 |
NAD(P)-binding Rossmann-like domain; |
7-67 |
2.30e-03 |
|
NAD(P)-binding Rossmann-like domain;
Pssm-ID: 433218 [Multi-domain] Cd Length: 67 Bit Score: 36.74 E-value: 2.30e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568910720 7 IVGAGVSGLAAIRCCLEEGLDPICFERSIDVGGLWkfSSHAEEGR-----ASIYQSVFTNSSKEMM 67
Cdd:pfam13450 1 IVGAGLAGLVAAALLAKRGFRVLVLEKRDRLGGNA--YSYRVPGYvfdygAHIFHGSDEPNVRDLL 64
|
|
| YobN |
COG1231 |
Monoamine oxidase [Amino acid transport and metabolism]; |
2-39 |
6.55e-03 |
|
Monoamine oxidase [Amino acid transport and metabolism];
Pssm-ID: 440844 [Multi-domain] Cd Length: 440 Bit Score: 39.13 E-value: 6.55e-03
10 20 30
....*....|....*....|....*....|....*...
gi 568910720 2 GKKVAIVGAGVSGLAAIRCCLEEGLDPICFERSIDVGG 39
Cdd:COG1231 7 GKDVVIVGAGLAGLAAARELRKAGLDVTVLEARDRVGG 44
|
|
|