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Conserved domains on  [gi|568923057|ref|XP_006501672|]
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protein AKNAD1 isoform X1 [Mus musculus]

Protein Classification

AKNA domain-containing protein( domain architecture ID 10575473)

AKNA domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
AKNA pfam12443
AT-hook-containing transcription factor; This domain family is found in eukaryotes, and is ...
 322-414 1.46e-31

AT-hook-containing transcription factor; This domain family is found in eukaryotes, and is approximately 110 amino acids in length. This family contains a transcription factor which regulates the expression of the costimulatory molecules on lymphocytes.


:

Pssm-ID: 463585  Cd Length: 95  Bit Score: 117.94  E-value: 1.46e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568923057  322 SQQIQVQPATHtCQEPLTGLEPEKCCLNLTPT-PQKDPFSN-SYIFQKISHGKQMCQKLKEQTDQLKNKVQEFSKRIKQD 399
Cdd:pfam12443   1 FQQLKAAPAAL-EEEYLTGCRSETLALKLSSSkGQPGPFDPsRELEAEIYQLGQRLQELKDQTDQLKQKVEEFSKDIAQD 79

                          90
                  ....*....|....*
gi 568923057  400 SFCHLQDIRLMNKEH 414
Cdd:pfam12443  80 SPGPHQDAHLPLPSG 94
 
Name Accession Description Interval E-value
AKNA pfam12443
AT-hook-containing transcription factor; This domain family is found in eukaryotes, and is ...
 322-414 1.46e-31

AT-hook-containing transcription factor; This domain family is found in eukaryotes, and is approximately 110 amino acids in length. This family contains a transcription factor which regulates the expression of the costimulatory molecules on lymphocytes.


Pssm-ID: 463585  Cd Length: 95  Bit Score: 117.94  E-value: 1.46e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568923057  322 SQQIQVQPATHtCQEPLTGLEPEKCCLNLTPT-PQKDPFSN-SYIFQKISHGKQMCQKLKEQTDQLKNKVQEFSKRIKQD 399
Cdd:pfam12443   1 FQQLKAAPAAL-EEEYLTGCRSETLALKLSSSkGQPGPFDPsRELEAEIYQLGQRLQELKDQTDQLKQKVEEFSKDIAQD 79

                          90
                  ....*....|....*
gi 568923057  400 SFCHLQDIRLMNKEH 414
Cdd:pfam12443  80 SPGPHQDAHLPLPSG 94
 
Name Accession Description Interval E-value
AKNA pfam12443
AT-hook-containing transcription factor; This domain family is found in eukaryotes, and is ...
 322-414 1.46e-31

AT-hook-containing transcription factor; This domain family is found in eukaryotes, and is approximately 110 amino acids in length. This family contains a transcription factor which regulates the expression of the costimulatory molecules on lymphocytes.


Pssm-ID: 463585  Cd Length: 95  Bit Score: 117.94  E-value: 1.46e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568923057  322 SQQIQVQPATHtCQEPLTGLEPEKCCLNLTPT-PQKDPFSN-SYIFQKISHGKQMCQKLKEQTDQLKNKVQEFSKRIKQD 399
Cdd:pfam12443   1 FQQLKAAPAAL-EEEYLTGCRSETLALKLSSSkGQPGPFDPsRELEAEIYQLGQRLQELKDQTDQLKQKVEEFSKDIAQD 79

                          90
                  ....*....|....*
gi 568923057  400 SFCHLQDIRLMNKEH 414
Cdd:pfam12443  80 SPGPHQDAHLPLPSG 94
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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