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Conserved domains on  [gi|568961828|ref|XP_006511398|]
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iron-responsive element-binding protein 2 isoform X1 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
PTZ00092 super family cl36507
aconitate hydratase-like protein; Provisional
3-691 0e+00

aconitate hydratase-like protein; Provisional


The actual alignment was detected with superfamily member PTZ00092:

Pssm-ID: 240263 [Multi-domain]  Cd Length: 898  Bit Score: 942.90  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828   3 SPSAGYTFEYLIETLNGNSQKKFFNVPKLGGTKYDILPYSIRVLLEAAVRNCDGFLMKKEDVMNILDWK-TKQSNVEVPF 81
Cdd:PTZ00092   9 SSSRPNPFEKVLKTLKDGGSYKYYSLNELHDPRLKKLPYSIRVLLESAVRNCDEFDVTSKDVENILNWEeNSKKQIEIPF 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  82 FPARVVLQDFTGIPAMVDFAAMREAVKTLGGDPKKVHPACPTDLTVDHSLQIDFSKcaiqnapnpgggdlqkagklsplk 161
Cdd:PTZ00092  89 KPARVLLQDFTGVPAVVDLAAMRDAMKRLGGDPAKINPLVPVDLVIDHSVQVDFSR------------------------ 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 162 vqskklpcrgqttcrgscdsgelsrnsgtfssqientpvlcpfhlqpvpEPETVLKNQEVEFGRNRERLQFFKWSSGAFK 241
Cdd:PTZ00092 145 -------------------------------------------------SPDALELNQEIEFERNLERFEFLKWGSKAFK 175
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 242 NVAVIPPGTGMAHQVNLEYLSRVVFEETDLLFPDSVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVGC 321
Cdd:PTZ00092 176 NLLIVPPGSGIVHQVNLEYLARVVFNKDGLLYPDSVVGTDSHTTMINGLGVLGWGVGGIEAEAVMLGQPISMVLPEVVGF 255
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 322 ELTGSSNAFVTSIDIVLGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHLEHTGF 401
Cdd:PTZ00092 256 KLTGKLSEHVTATDLVLTVTSMLRKRGVVGKFVEFYGPGVKTLSLADRATIANMAPEYGATMGFFPIDEKTLDYLKQTGR 335
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 402 DKTKLESMEKYLKAVKLFRNDenSSEPEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKSDFQACLNEKVGFKGFQVAA 481
Cdd:PTZ00092 336 SEEKVELIEKYLKANGLFRTY--AEQIEYSDVLELDLSTVVPSVAGPKRPHDRVPLSDLKKDFTACLSAPVGFKGFGIPE 413
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 482 EKQSDTVSVRYDGSEYKLSHGSVVIAAVISCTNNCNPSVMLAAGLLAKKAVEIGLRVKPYIRTSLSPGSGMVTHYLSSSG 561
Cdd:PTZ00092 414 EKHEKKVKFTYKGKEYTLTHGSVVIAAITSCTNTSNPSVMLAAGLLAKKAVEKGLKVPPYIKTSLSPGSKVVTKYLEASG 493
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 562 VLPYLSKLGFDIVGYGCSTCVGNTAPLSEAVLNAVKQGDLVTCGVLSGNKHFEGRLCDCVRANYLASPPLVVAYAIAGTV 641
Cdd:PTZ00092 494 LLKYLEKLGFYTAGYGCMTCIGNSGDLDPEVSEAITNNDLVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGRV 573
                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|
gi 568961828 642 NIDFQTEPLGTDSTGKEIYLHDIWPSREEVHQMEEEHVILSMFKTLKEKV 691
Cdd:PTZ00092 574 NIDFETEPLGSDKTGKPVFLRDIWPSREEIQALEAKYVKPEMFKEVYSNI 623
 
Name Accession Description Interval E-value
PTZ00092 PTZ00092
aconitate hydratase-like protein; Provisional
3-691 0e+00

aconitate hydratase-like protein; Provisional


Pssm-ID: 240263 [Multi-domain]  Cd Length: 898  Bit Score: 942.90  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828   3 SPSAGYTFEYLIETLNGNSQKKFFNVPKLGGTKYDILPYSIRVLLEAAVRNCDGFLMKKEDVMNILDWK-TKQSNVEVPF 81
Cdd:PTZ00092   9 SSSRPNPFEKVLKTLKDGGSYKYYSLNELHDPRLKKLPYSIRVLLESAVRNCDEFDVTSKDVENILNWEeNSKKQIEIPF 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  82 FPARVVLQDFTGIPAMVDFAAMREAVKTLGGDPKKVHPACPTDLTVDHSLQIDFSKcaiqnapnpgggdlqkagklsplk 161
Cdd:PTZ00092  89 KPARVLLQDFTGVPAVVDLAAMRDAMKRLGGDPAKINPLVPVDLVIDHSVQVDFSR------------------------ 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 162 vqskklpcrgqttcrgscdsgelsrnsgtfssqientpvlcpfhlqpvpEPETVLKNQEVEFGRNRERLQFFKWSSGAFK 241
Cdd:PTZ00092 145 -------------------------------------------------SPDALELNQEIEFERNLERFEFLKWGSKAFK 175
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 242 NVAVIPPGTGMAHQVNLEYLSRVVFEETDLLFPDSVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVGC 321
Cdd:PTZ00092 176 NLLIVPPGSGIVHQVNLEYLARVVFNKDGLLYPDSVVGTDSHTTMINGLGVLGWGVGGIEAEAVMLGQPISMVLPEVVGF 255
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 322 ELTGSSNAFVTSIDIVLGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHLEHTGF 401
Cdd:PTZ00092 256 KLTGKLSEHVTATDLVLTVTSMLRKRGVVGKFVEFYGPGVKTLSLADRATIANMAPEYGATMGFFPIDEKTLDYLKQTGR 335
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 402 DKTKLESMEKYLKAVKLFRNDenSSEPEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKSDFQACLNEKVGFKGFQVAA 481
Cdd:PTZ00092 336 SEEKVELIEKYLKANGLFRTY--AEQIEYSDVLELDLSTVVPSVAGPKRPHDRVPLSDLKKDFTACLSAPVGFKGFGIPE 413
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 482 EKQSDTVSVRYDGSEYKLSHGSVVIAAVISCTNNCNPSVMLAAGLLAKKAVEIGLRVKPYIRTSLSPGSGMVTHYLSSSG 561
Cdd:PTZ00092 414 EKHEKKVKFTYKGKEYTLTHGSVVIAAITSCTNTSNPSVMLAAGLLAKKAVEKGLKVPPYIKTSLSPGSKVVTKYLEASG 493
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 562 VLPYLSKLGFDIVGYGCSTCVGNTAPLSEAVLNAVKQGDLVTCGVLSGNKHFEGRLCDCVRANYLASPPLVVAYAIAGTV 641
Cdd:PTZ00092 494 LLKYLEKLGFYTAGYGCMTCIGNSGDLDPEVSEAITNNDLVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGRV 573
                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|
gi 568961828 642 NIDFQTEPLGTDSTGKEIYLHDIWPSREEVHQMEEEHVILSMFKTLKEKV 691
Cdd:PTZ00092 574 NIDFETEPLGSDKTGKPVFLRDIWPSREEIQALEAKYVKPEMFKEVYSNI 623
AcnA COG1048
Aconitase A [Energy production and conversion]; Aconitase A is part of the Pathway/BioSystem: ...
19-685 0e+00

Aconitase A [Energy production and conversion]; Aconitase A is part of the Pathway/BioSystem: Lysine biosynthesisTCA cycle


Pssm-ID: 440669 [Multi-domain]  Cd Length: 891  Bit Score: 854.01  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  19 GNSQKKFFNVPKLGGTKYDI--LPYSIRVLLEAAVRNCDGFLMKKEDVMNILDW-KTKQSNVEVPFFPARVVLQDFTGIP 95
Cdd:COG1048   14 GGKPYTYYSLPALEEAGGDIsrLPYSLKILLENLLRNEDGETVTEEDIKALANWlPKARGDDEIPFRPARVLMQDFTGVP 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  96 AMVDFAAMREAVKTLGGDPKKVHPACPTDLTVDHSLQIDFSkcaiqnapnpgggdlqkagklsplkvqskklpcrgqttc 175
Cdd:COG1048   94 AVVDLAAMRDAVARLGGDPKKINPLVPVDLVIDHSVQVDYF--------------------------------------- 134
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 176 rGSCDSGElsrnsgtfssqientpvlcpfhlqpvpepetvlKNQEVEFGRNRERLQFFKWSSGAFKNVAVIPPGTGMAHQ 255
Cdd:COG1048  135 -GTPDALE---------------------------------KNLELEFERNRERYQFLKWGQQAFDNFRVVPPGTGIVHQ 180
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 256 VNLEYLSRVVFEE----TDLLFPDSVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVGCELTGSSNAFV 331
Cdd:COG1048  181 VNLEYLAFVVWTReedgETVAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVVGVKLTGKLPEGV 260
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 332 TSIDIVLGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHLEHTGFDKTKLESMEK 411
Cdd:COG1048  261 TATDLVLTVTEMLRKKGVVGKFVEFFGPGLASLSLADRATIANMAPEYGATCGFFPVDEETLDYLRLTGRSEEQIELVEA 340
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 412 YLKAVKLFRNDEnSSEPEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKSDFQACLNEKVGfkgfqvaaEKQSDTVSVR 491
Cdd:COG1048  341 YAKAQGLWRDPD-APEPYYSDVLELDLSTVEPSLAGPKRPQDRIPLSDLKEAFRAALAAPVG--------EELDKPVRVE 411
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 492 YDGSEYKLSHGSVVIAAVISCTNNCNPSVMLAAGLLAKKAVEIGLRVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGF 571
Cdd:COG1048  412 VDGEEFELGHGAVVIAAITSCTNTSNPSVMIAAGLLAKKAVEKGLKVKPWVKTSLAPGSKVVTDYLERAGLLPYLEALGF 491
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 572 DIVGYGCSTCVGNTAPLSEAVLNAVKQGDLVTCGVLSGNKHFEGRLCDCVRANYLASPPLVVAYAIAGTVNIDFQTEPLG 651
Cdd:COG1048  492 NVVGYGCTTCIGNSGPLPPEISEAIEENDLVVAAVLSGNRNFEGRIHPDVKANFLASPPLVVAYALAGTVDIDLTTDPLG 571
                        650       660       670
                 ....*....|....*....|....*....|....
gi 568961828 652 TDSTGKEIYLHDIWPSREEVHQMEEEHVILSMFK 685
Cdd:COG1048  572 TDKDGKPVYLKDIWPSGEEIPAAVFKAVTPEMFR 605
aconitase_1 TIGR01341
aconitate hydratase 1; This model represents one form of the TCA cycle enzyme aconitate ...
25-691 0e+00

aconitate hydratase 1; This model represents one form of the TCA cycle enzyme aconitate hydratase, also known as aconitase and citrate hydro-lyase. It is found in bacteria, archaea, and eukaryotic cytosol. It has been shown to act also as an iron-responsive element binding protein in animals and may have the same role in other eukaryotes. [Energy metabolism, TCA cycle]


Pssm-ID: 273562 [Multi-domain]  Cd Length: 876  Bit Score: 791.31  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828   25 FFNVPKLGGTKYDI--LPYSIRVLLEAAVRNCDGFLMKKEDVMNILDWKTKQ-SNVEVPFFPARVVLQDFTGIPAMVDFA 101
Cdd:TIGR01341   5 YYSLKALEESGGKIskLPYSIRILLESVLRNLDGFSITEEDIENILKWKIGEvADTEIAFKPARVVMQDFTGVPAVVDLA 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  102 AMREAVKTLGGDPKKVHPACPTDLTVDHSLQIDfskcaiqnapnpgggdlqKAGklsplkvqskklpcrgqttcrgscds 181
Cdd:TIGR01341  85 AMREAMKNLGGDPKKINPLVPVDLVIDHSVQVD------------------YYG-------------------------- 120
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  182 gelsrnsgtfssqientpvlcpfhlqpvpEPETVLKNQEVEFGRNRERLQFFKWSSGAFKNVAVIPPGTGMAHQVNLEYL 261
Cdd:TIGR01341 121 -----------------------------TEYALEFNMELEFERNLERYQFLKWAQKAFRNFRVVPPGTGIIHQVNLEYL 171
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  262 SRVVFEE----TDLLFPDSVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVGCELTGSSNAFVTSIDIV 337
Cdd:TIGR01341 172 ATVVFKAevdgELTAYPDSLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPYYMNVPEVIGVKLTGKLQEGVTATDLV 251
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  338 LGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHLEHTGFDKTKLESMEKYLKAVK 417
Cdd:TIGR01341 252 LTVTQMLRKKGVVGKFVEFFGPGLSELSLADRATIANMAPEYGATCGFFPIDDVTLQYLRLTGRDGDHVELVEKYARAQG 331
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  418 LFRNDenSSEPEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKSDFQACLNEKVGFKGFQVAAEKQSDTVsvryDGSEY 497
Cdd:TIGR01341 332 LFYDD--SEEPRYTDVVELDLSDVEPSVAGPKRPQDRIPLREVKAKFSKELEKNGGDKGFTLRKEPLKKKV----NGQNK 405
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  498 KLSHGSVVIAAVISCTNNCNPSVMLAAGLLAKKAVEIGLRVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFDIVGYG 577
Cdd:TIGR01341 406 QLEDGAVVIAAITSCTNTSNPSVMLGAGLLAKKAVELGLKVPPYVKTSLAPGSKVVTDYLAESGLLPYLEELGFNLVGYG 485
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  578 CSTCVGNTAPLSEAVLNAVKQGDLVTCGVLSGNKHFEGRLCDCVRANYLASPPLVVAYAIAGTVNIDFQTEPLGTDSTGK 657
Cdd:TIGR01341 486 CTTCIGNSGPLPKYVEEAIKKNDLEVYAVLSGNRNFEGRIHPLVKGNYLASPPLVVAYALAGNIDINLYTEPIGTDKDGK 565
                         650       660       670
                  ....*....|....*....|....*....|....
gi 568961828  658 EIYLHDIWPSREEVHQMEEEHVILSMFKTLKEKV 691
Cdd:TIGR01341 566 PVYLRDIWPSNKEIAAYVNMAVKPEMFKKEYENI 599
AcnA_IRP cd01586
Aconitase A catalytic domain; Aconitase A catalytic domain. This is the major form of the TCA ...
85-641 0e+00

Aconitase A catalytic domain; Aconitase A catalytic domain. This is the major form of the TCA cycle enzyme aconitate hydratase, also known as aconitase and citrate hydrolyase. It includes bacterial and archaeal aconitase A, and the eukaryotic cytosolic form of aconitase. This group also includes sequences that have been shown to act as an iron-responsive element (IRE) binding protein in animals and may have the same role in other eukaryotes.


Pssm-ID: 153136  Cd Length: 404  Bit Score: 701.75  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  85 RVVLQDFTGIPAMVDFAAMREAVKTLGGDPKKVHPACPTDLTVDHSLQIDFSKCaiqnapnpgggdlqkagklsplkvqs 164
Cdd:cd01586    1 RVILQDFTGVPAVVDLAAMRDAVKRLGGDPEKINPLIPVDLVIDHSVQVDFYGT-------------------------- 54
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 165 kklpcrgqttcrgscdsgelsrnsgtfssqientpvlcpfhlqpvpePETVLKNQEVEFGRNRERLQFFKWSSGAFKNVA 244
Cdd:cd01586   55 -----------------------------------------------ADALAKNMKLEFERNRERYEFLKWGQKAFKNLR 87
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 245 VIPPGTGMAHQVNLEYLSRVVF----EETDLLFPDSVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVG 320
Cdd:cd01586   88 VVPPGTGIIHQVNLEYLARVVFtseeDGDGVAYPDSVVGTDSHTTMINGLGVLGWGVGGIEAEAVMLGQPISMLLPEVVG 167
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 321 CELTGSSNAFVTSIDIVLGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDnvtlrhlehtg 400
Cdd:cd01586  168 VKLTGKLRPGVTATDLVLTVTQMLRKVGVVGKFVEFFGPGVAKLSVADRATIANMAPEYGATCGFFPVD----------- 236
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 401 fdktklesmekylkavklfrndenssepeySQVIQINLNSIVASVSGPKRPQDRVAVtdmksdfqaclnekvgfkgfqva 480
Cdd:cd01586  237 ------------------------------TQVVELDLSTVEPSVSGPKRPQDRVPL----------------------- 263
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 481 aekqsdtvsvrydgseyklsHGSVVIAAVISCTNNCNPSVMLAAGLLAKKAVEIGLRVKPYIRTSLSPGSGMVTHYLSSS 560
Cdd:cd01586  264 --------------------HGSVVIAAITSCTNTSNPSVMLAAGLLAKKAVELGLKVKPYVKTSLAPGSRVVTKYLEAS 323
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 561 GVLPYLSKLGFDIVGYGCSTCVGNTAPLSEAVLNAVKQGDLVTCGVLSGNKHFEGRLCDCVRANYLASPPLVVAYAIAGT 640
Cdd:cd01586  324 GLLPYLEKLGFHVVGYGCTTCIGNSGPLPEEVEEAIKENDLVVAAVLSGNRNFEGRIHPLVRANYLASPPLVVAYALAGT 403

                 .
gi 568961828 641 V 641
Cdd:cd01586  404 V 404
Aconitase pfam00330
Aconitase family (aconitate hydratase);
78-639 0e+00

Aconitase family (aconitate hydratase);


Pssm-ID: 459764  Cd Length: 460  Bit Score: 535.85  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828   78 EVPFFPARVVLQDFTGIPAMVDFAAMREAVKTLGGDPKKVHPACPTDLTVDHSlqidfskcaiqnapnpgggdlqkagkl 157
Cdd:pfam00330  15 SLLYIPDRVLMHDVTSPQAFVDLRAAGRAVRRPGGTPATIDHLVPTDLVIDHA--------------------------- 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  158 splkvqskklpcrgqttcrgscdsgelsrnsgtfssqientpvlcpfhlqpvpePETVLKNQEVEFGRNRERLQFFKWSS 237
Cdd:pfam00330  68 ------------------------------------------------------PDALDKNIEDEISRNKEQYDFLEWNA 93
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  238 GAFkNVAVIPPGTGMAHQVNLEYLsrvvfeetdLLFPD-SVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLP 316
Cdd:pfam00330  94 KKF-GIRFVPPGQGIVHQVGLEYG---------LALPGmTIVGTDSHTTTHGGLGALAFGVGGSEAEHVLATQPLEMKKP 163
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  317 EVVGCELTGSSNAFVTSIDIVLGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHL 396
Cdd:pfam00330 164 KVVGVKLTGKLPPGVTAKDVILAIIGKLGVKGGTGKVVEFFGPGVRSLSMEGRATICNMAIEYGATAGLFPPDETTFEYL 243
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  397 EHTGFDKTKLEsmEKYLKAVKLFRNDENsSEPEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKSD-FQACLNEKVGFK 475
Cdd:pfam00330 244 RATGRPEAPKG--EAYDKAVAWKTLASD-PGAEYDKVVEIDLSTIEPMVTGPTRPQDAVPLSELVPDpFADAVKRKAAER 320
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  476 gfqvaaekqsdTVSVRYDGSEYKLSHGSVVIAAVISCTNNCNPSVMLAAGLLaKKAVEIGLRVKPYIRTSLSPGSGMVTH 555
Cdd:pfam00330 321 -----------ALEYMGLGPGTPLSDGKVDIAFIGSCTNSSIEDLRAAAGLL-KKAVEKGLKVAPGVKASVVPGSEVVRA 388
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  556 YLSSSGVLPYLSKLGFDIVGYGCSTCVGNTAPLSEavlnavkqGDlvtCGVLSGNKHFEGRLCDCVRAnYLASPPLVVAY 635
Cdd:pfam00330 389 YAEAEGLDKILEEAGFEWRGPGCSMCIGNSDRLPP--------GE---RCVSSSNRNFEGRQGPGGRT-HLASPALVAAA 456

                  ....
gi 568961828  636 AIAG 639
Cdd:pfam00330 457 AIAG 460
 
Name Accession Description Interval E-value
PTZ00092 PTZ00092
aconitate hydratase-like protein; Provisional
3-691 0e+00

aconitate hydratase-like protein; Provisional


Pssm-ID: 240263 [Multi-domain]  Cd Length: 898  Bit Score: 942.90  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828   3 SPSAGYTFEYLIETLNGNSQKKFFNVPKLGGTKYDILPYSIRVLLEAAVRNCDGFLMKKEDVMNILDWK-TKQSNVEVPF 81
Cdd:PTZ00092   9 SSSRPNPFEKVLKTLKDGGSYKYYSLNELHDPRLKKLPYSIRVLLESAVRNCDEFDVTSKDVENILNWEeNSKKQIEIPF 88
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  82 FPARVVLQDFTGIPAMVDFAAMREAVKTLGGDPKKVHPACPTDLTVDHSLQIDFSKcaiqnapnpgggdlqkagklsplk 161
Cdd:PTZ00092  89 KPARVLLQDFTGVPAVVDLAAMRDAMKRLGGDPAKINPLVPVDLVIDHSVQVDFSR------------------------ 144
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 162 vqskklpcrgqttcrgscdsgelsrnsgtfssqientpvlcpfhlqpvpEPETVLKNQEVEFGRNRERLQFFKWSSGAFK 241
Cdd:PTZ00092 145 -------------------------------------------------SPDALELNQEIEFERNLERFEFLKWGSKAFK 175
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 242 NVAVIPPGTGMAHQVNLEYLSRVVFEETDLLFPDSVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVGC 321
Cdd:PTZ00092 176 NLLIVPPGSGIVHQVNLEYLARVVFNKDGLLYPDSVVGTDSHTTMINGLGVLGWGVGGIEAEAVMLGQPISMVLPEVVGF 255
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 322 ELTGSSNAFVTSIDIVLGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHLEHTGF 401
Cdd:PTZ00092 256 KLTGKLSEHVTATDLVLTVTSMLRKRGVVGKFVEFYGPGVKTLSLADRATIANMAPEYGATMGFFPIDEKTLDYLKQTGR 335
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 402 DKTKLESMEKYLKAVKLFRNDenSSEPEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKSDFQACLNEKVGFKGFQVAA 481
Cdd:PTZ00092 336 SEEKVELIEKYLKANGLFRTY--AEQIEYSDVLELDLSTVVPSVAGPKRPHDRVPLSDLKKDFTACLSAPVGFKGFGIPE 413
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 482 EKQSDTVSVRYDGSEYKLSHGSVVIAAVISCTNNCNPSVMLAAGLLAKKAVEIGLRVKPYIRTSLSPGSGMVTHYLSSSG 561
Cdd:PTZ00092 414 EKHEKKVKFTYKGKEYTLTHGSVVIAAITSCTNTSNPSVMLAAGLLAKKAVEKGLKVPPYIKTSLSPGSKVVTKYLEASG 493
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 562 VLPYLSKLGFDIVGYGCSTCVGNTAPLSEAVLNAVKQGDLVTCGVLSGNKHFEGRLCDCVRANYLASPPLVVAYAIAGTV 641
Cdd:PTZ00092 494 LLKYLEKLGFYTAGYGCMTCIGNSGDLDPEVSEAITNNDLVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVAYALAGRV 573
                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|
gi 568961828 642 NIDFQTEPLGTDSTGKEIYLHDIWPSREEVHQMEEEHVILSMFKTLKEKV 691
Cdd:PTZ00092 574 NIDFETEPLGSDKTGKPVFLRDIWPSREEIQALEAKYVKPEMFKEVYSNI 623
PRK09277 PRK09277
aconitate hydratase AcnA;
9-691 0e+00

aconitate hydratase AcnA;


Pssm-ID: 236445 [Multi-domain]  Cd Length: 888  Bit Score: 868.29  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828   9 TFEYLiETLNGNSQK-KFFNVPKL---GGTKYDILPYSIRVLLEAAVRNCDGFLMKKEDVMNILDW-KTKQSNVEVPFFP 83
Cdd:PRK09277   6 SFKAR-KTLEVGGKSyDYYSLRALeakGLGDISRLPYSLRVLLENLLRNEDGRSVTEEDIEALAEWlPKAKPDREIPFRP 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  84 ARVVLQDFTGIPAMVDFAAMREAVKTLGGDPKKVHPACPTDLTVDHSLQIDFskcaiqnapnpgGGDlqkagklsplkvq 163
Cdd:PRK09277  85 ARVVMQDFTGVPAVVDLAAMRDAIADLGGDPAKINPLVPVDLVIDHSVQVDY------------FGT------------- 139
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 164 skklpcrgqttcrgscdsgelsrnsgtfssqientpvlcpfhlqpvpePETVLKNQEVEFGRNRERLQFFKWSSGAFKNV 243
Cdd:PRK09277 140 ------------------------------------------------PDAFEKNVELEFERNEERYQFLKWGQKAFDNF 171
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 244 AVIPPGTGMAHQVNLEYLSRVVFEETD---LLFPDSVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVG 320
Cdd:PRK09277 172 RVVPPGTGICHQVNLEYLAPVVWTREDgelVAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPSSMLIPEVVG 251
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 321 CELTGSSNAFVTSIDIVLGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHLEHTG 400
Cdd:PRK09277 252 VKLTGKLPEGVTATDLVLTVTEMLRKKGVVGKFVEFFGEGLASLSLADRATIANMAPEYGATCGFFPIDEETLDYLRLTG 331
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 401 FDKTKLESMEKYLKAVKLFRNDEnsSEPEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKSDFQAclNEKVGFKGFQVA 480
Cdd:PRK09277 332 RDEEQVALVEAYAKAQGLWRDPL--EEPVYTDVLELDLSTVEPSLAGPKRPQDRIPLSDVKEAFAK--SAELGVQGFGLD 407
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 481 AEKQsdtvsvrydGSEYKLSHGSVVIAAVISCTNNCNPSVMLAAGLLAKKAVEIGLRVKPYIRTSLSPGSGMVTHYLSSS 560
Cdd:PRK09277 408 EAEE---------GEDYELPDGAVVIAAITSCTNTSNPSVMIAAGLLAKKAVEKGLKVKPWVKTSLAPGSKVVTDYLEKA 478
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 561 GVLPYLSKLGFDIVGYGCSTCVGNTAPLSEAVLNAVKQGDLVTCGVLSGNKHFEGRLCDCVRANYLASPPLVVAYAIAGT 640
Cdd:PRK09277 479 GLLPYLEALGFNLVGYGCTTCIGNSGPLPPEIEKAINDNDLVVTAVLSGNRNFEGRIHPLVKANYLASPPLVVAYALAGT 558
                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|.
gi 568961828 641 VNIDFQTEPLGTDSTGKEIYLHDIWPSREEVHQMEEEHVILSMFKTLKEKV 691
Cdd:PRK09277 559 VDIDLEKDPLGTDKDGNPVYLKDIWPSDEEIDAVVAKAVKPEMFRKEYADV 609
AcnA COG1048
Aconitase A [Energy production and conversion]; Aconitase A is part of the Pathway/BioSystem: ...
19-685 0e+00

Aconitase A [Energy production and conversion]; Aconitase A is part of the Pathway/BioSystem: Lysine biosynthesisTCA cycle


Pssm-ID: 440669 [Multi-domain]  Cd Length: 891  Bit Score: 854.01  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  19 GNSQKKFFNVPKLGGTKYDI--LPYSIRVLLEAAVRNCDGFLMKKEDVMNILDW-KTKQSNVEVPFFPARVVLQDFTGIP 95
Cdd:COG1048   14 GGKPYTYYSLPALEEAGGDIsrLPYSLKILLENLLRNEDGETVTEEDIKALANWlPKARGDDEIPFRPARVLMQDFTGVP 93
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  96 AMVDFAAMREAVKTLGGDPKKVHPACPTDLTVDHSLQIDFSkcaiqnapnpgggdlqkagklsplkvqskklpcrgqttc 175
Cdd:COG1048   94 AVVDLAAMRDAVARLGGDPKKINPLVPVDLVIDHSVQVDYF--------------------------------------- 134
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 176 rGSCDSGElsrnsgtfssqientpvlcpfhlqpvpepetvlKNQEVEFGRNRERLQFFKWSSGAFKNVAVIPPGTGMAHQ 255
Cdd:COG1048  135 -GTPDALE---------------------------------KNLELEFERNRERYQFLKWGQQAFDNFRVVPPGTGIVHQ 180
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 256 VNLEYLSRVVFEE----TDLLFPDSVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVGCELTGSSNAFV 331
Cdd:COG1048  181 VNLEYLAFVVWTReedgETVAYPDTLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPVSMLIPEVVGVKLTGKLPEGV 260
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 332 TSIDIVLGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHLEHTGFDKTKLESMEK 411
Cdd:COG1048  261 TATDLVLTVTEMLRKKGVVGKFVEFFGPGLASLSLADRATIANMAPEYGATCGFFPVDEETLDYLRLTGRSEEQIELVEA 340
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 412 YLKAVKLFRNDEnSSEPEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKSDFQACLNEKVGfkgfqvaaEKQSDTVSVR 491
Cdd:COG1048  341 YAKAQGLWRDPD-APEPYYSDVLELDLSTVEPSLAGPKRPQDRIPLSDLKEAFRAALAAPVG--------EELDKPVRVE 411
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 492 YDGSEYKLSHGSVVIAAVISCTNNCNPSVMLAAGLLAKKAVEIGLRVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGF 571
Cdd:COG1048  412 VDGEEFELGHGAVVIAAITSCTNTSNPSVMIAAGLLAKKAVEKGLKVKPWVKTSLAPGSKVVTDYLERAGLLPYLEALGF 491
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 572 DIVGYGCSTCVGNTAPLSEAVLNAVKQGDLVTCGVLSGNKHFEGRLCDCVRANYLASPPLVVAYAIAGTVNIDFQTEPLG 651
Cdd:COG1048  492 NVVGYGCTTCIGNSGPLPPEISEAIEENDLVVAAVLSGNRNFEGRIHPDVKANFLASPPLVVAYALAGTVDIDLTTDPLG 571
                        650       660       670
                 ....*....|....*....|....*....|....
gi 568961828 652 TDSTGKEIYLHDIWPSREEVHQMEEEHVILSMFK 685
Cdd:COG1048  572 TDKDGKPVYLKDIWPSGEEIPAAVFKAVTPEMFR 605
PLN00070 PLN00070
aconitate hydratase
1-691 0e+00

aconitate hydratase


Pssm-ID: 215047 [Multi-domain]  Cd Length: 936  Bit Score: 792.85  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828   1 MDSPSAGYTFEYLIETL---NGNSQKKFFNVPKLGGTKYDILPYSIRVLLEAAVRNCDGFLMKKEDVMNILDW-KTKQSN 76
Cdd:PLN00070  36 FASMASENPFKGILTSLpkpGGGEFGKYYSLPALNDPRIDKLPYSIRILLESAIRNCDNFQVTKEDVEKIIDWeNTSPKQ 115
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  77 VEVPFFPARVVLQDFTGIPAMVDFAAMREAVKTLGGDPKKVHPACPTDLTVDHSLQIDFSKCAiqNApnpgggdlqkagk 156
Cdd:PLN00070 116 VEIPFKPARVLLQDFTGVPAVVDLACMRDAMNNLGGDPNKINPLVPVDLVIDHSVQVDVARSE--NA------------- 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 157 lsplkvqskklpcrgqttcrgscdsgelsrnsgtfssqientpvlcpfhlqpvpepetVLKNQEVEFGRNRERLQFFKWS 236
Cdd:PLN00070 181 ----------------------------------------------------------VQANMELEFQRNKERFAFLKWG 202
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 237 SGAFKNVAVIPPGTGMAHQVNLEYLSRVVFEETDLLFPDSVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLP 316
Cdd:PLN00070 203 STAFQNMLVVPPGSGIVHQVNLEYLGRVVFNTDGILYPDSVVGTDSHTTMIDGLGVAGWGVGGIEAEAAMLGQPMSMVLP 282
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 317 EVVGCELTGSSNAFVTSIDIVLGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHL 396
Cdd:PLN00070 283 GVVGFKLSGKLRDGVTATDLVLTVTQMLRKHGVVGKFVEFYGEGMSELSLADRATIANMSPEYGATMGFFPVDHVTLQYL 362
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 397 EHTGFDKTKLESMEKYLKAVKLFRnDENSSEPE--YSQVIQINLNSIVASVSGPKRPQDRVAVTDMKSDFQACLNEKVGF 474
Cdd:PLN00070 363 KLTGRSDETVAMIEAYLRANKMFV-DYNEPQQErvYSSYLELDLEDVEPCISGPKRPHDRVPLKEMKADWHSCLDNKVGF 441
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 475 KGFQVAAEKQSDTVSVRYDGSEYKLSHGSVVIAAVISCTNNCNPSVMLAAGLLAKKAVEIGLRVKPYIRTSLSPGSGMVT 554
Cdd:PLN00070 442 KGFAVPKEAQSKVAKFSFHGQPAELRHGSVVIAAITSCTNTSNPSVMLGAGLVAKKACELGLEVKPWIKTSLAPGSGVVT 521
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 555 HYLSSSGVLPYLSKLGFDIVGYGCSTCVGNTAPLSEAVLNAVKQGDLVTCGVLSGNKHFEGRLCDCVRANYLASPPLVVA 634
Cdd:PLN00070 522 KYLLKSGLQKYLNQQGFHIVGYGCTTCIGNSGELDESVASAITENDIVAAAVLSGNRNFEGRVHPLTRANYLASPPLVVA 601
                        650       660       670       680       690
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 568961828 635 YAIAGTVNIDFQTEPLGTDSTGKEIYLHDIWPSREEVHQMEEEHVILSMFKTLKEKV 691
Cdd:PLN00070 602 YALAGTVDIDFEKEPIGTGKDGKDVFFRDIWPSNEEVAEVVQSSVLPDMFKSTYEAI 658
aconitase_1 TIGR01341
aconitate hydratase 1; This model represents one form of the TCA cycle enzyme aconitate ...
25-691 0e+00

aconitate hydratase 1; This model represents one form of the TCA cycle enzyme aconitate hydratase, also known as aconitase and citrate hydro-lyase. It is found in bacteria, archaea, and eukaryotic cytosol. It has been shown to act also as an iron-responsive element binding protein in animals and may have the same role in other eukaryotes. [Energy metabolism, TCA cycle]


Pssm-ID: 273562 [Multi-domain]  Cd Length: 876  Bit Score: 791.31  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828   25 FFNVPKLGGTKYDI--LPYSIRVLLEAAVRNCDGFLMKKEDVMNILDWKTKQ-SNVEVPFFPARVVLQDFTGIPAMVDFA 101
Cdd:TIGR01341   5 YYSLKALEESGGKIskLPYSIRILLESVLRNLDGFSITEEDIENILKWKIGEvADTEIAFKPARVVMQDFTGVPAVVDLA 84
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  102 AMREAVKTLGGDPKKVHPACPTDLTVDHSLQIDfskcaiqnapnpgggdlqKAGklsplkvqskklpcrgqttcrgscds 181
Cdd:TIGR01341  85 AMREAMKNLGGDPKKINPLVPVDLVIDHSVQVD------------------YYG-------------------------- 120
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  182 gelsrnsgtfssqientpvlcpfhlqpvpEPETVLKNQEVEFGRNRERLQFFKWSSGAFKNVAVIPPGTGMAHQVNLEYL 261
Cdd:TIGR01341 121 -----------------------------TEYALEFNMELEFERNLERYQFLKWAQKAFRNFRVVPPGTGIIHQVNLEYL 171
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  262 SRVVFEE----TDLLFPDSVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVGCELTGSSNAFVTSIDIV 337
Cdd:TIGR01341 172 ATVVFKAevdgELTAYPDSLVGTDSHTTMINGLGVLGWGVGGIEAEAAMLGQPYYMNVPEVIGVKLTGKLQEGVTATDLV 251
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  338 LGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHLEHTGFDKTKLESMEKYLKAVK 417
Cdd:TIGR01341 252 LTVTQMLRKKGVVGKFVEFFGPGLSELSLADRATIANMAPEYGATCGFFPIDDVTLQYLRLTGRDGDHVELVEKYARAQG 331
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  418 LFRNDenSSEPEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKSDFQACLNEKVGFKGFQVAAEKQSDTVsvryDGSEY 497
Cdd:TIGR01341 332 LFYDD--SEEPRYTDVVELDLSDVEPSVAGPKRPQDRIPLREVKAKFSKELEKNGGDKGFTLRKEPLKKKV----NGQNK 405
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  498 KLSHGSVVIAAVISCTNNCNPSVMLAAGLLAKKAVEIGLRVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFDIVGYG 577
Cdd:TIGR01341 406 QLEDGAVVIAAITSCTNTSNPSVMLGAGLLAKKAVELGLKVPPYVKTSLAPGSKVVTDYLAESGLLPYLEELGFNLVGYG 485
                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  578 CSTCVGNTAPLSEAVLNAVKQGDLVTCGVLSGNKHFEGRLCDCVRANYLASPPLVVAYAIAGTVNIDFQTEPLGTDSTGK 657
Cdd:TIGR01341 486 CTTCIGNSGPLPKYVEEAIKKNDLEVYAVLSGNRNFEGRIHPLVKGNYLASPPLVVAYALAGNIDINLYTEPIGTDKDGK 565
                         650       660       670
                  ....*....|....*....|....*....|....
gi 568961828  658 EIYLHDIWPSREEVHQMEEEHVILSMFKTLKEKV 691
Cdd:TIGR01341 566 PVYLRDIWPSNKEIAAYVNMAVKPEMFKKEYENI 599
acnA PRK12881
aconitate hydratase AcnA;
9-685 0e+00

aconitate hydratase AcnA;


Pssm-ID: 237246 [Multi-domain]  Cd Length: 889  Bit Score: 764.09  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828   9 TFEYLIETLNGNSQKKFFNVPKLG---GTKYDILPYSIRVLLEAAVRNCDGFLMKKEDVMNILDWK-TKQSNVEVPFFPA 84
Cdd:PRK12881   5 LHKTLKEFDVGGKTYKFYSLPALGkelGGDLARLPVSLRVLLENLLRNEDGKKVTEEHLEALANWLpERKSDDEIPFVPA 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  85 RVVLQDFTGIPAMVDFAAMREAVKTLGGDPKKVHPACPTDLTVDHSLQIDFskcaiqnapnpgGGDlqkagklsplkvqs 164
Cdd:PRK12881  85 RVVMQDFTGVPALVDLAAMRDAAAEAGGDPAKINPLVPVDLVVDHSVAVDY------------FGQ-------------- 138
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 165 kklpcrgqttcrgscdsgelsrnsgtfssqientpvlcpfhlqpvpePETVLKNQEVEFGRNRERLQFFKWSSGAFKNVA 244
Cdd:PRK12881 139 -----------------------------------------------KDALDLNMKIEFQRNAERYQFLKWGMQAFDNFR 171
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 245 VIPPGTGMAHQVNLEYLSRVVFEETD----LLFPDSVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVG 320
Cdd:PRK12881 172 VVPPGTGIMHQVNLEYLARVVHTKEDdgdtVAYPDTLVGTDSHTTMINGIGVLGWGVGGIEAEAVMLGQPVYMLIPDVVG 251
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 321 CELTGSSNAFVTSIDIVLGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHLEHTG 400
Cdd:PRK12881 252 VELTGKLREGVTATDLVLTVTEMLRKEGVVGKFVEFFGEGVASLTLGDRATIANMAPEYGATMGFFPVDEQTLDYLRLTG 331
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 401 FDKTKLESMEKYLKAVKLFRNDENssEPEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKSDFQACLNEKVGFKGFQVA 480
Cdd:PRK12881 332 RTEAQIALVEAYAKAQGLWGDPKA--EPRYTRTLELDLSTVAPSLAGPKRPQDRIALGNVKSAFSDLFSKPVAENGFAKK 409
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 481 AEkqsdtvsvryDGSEYKLSHGSVVIAAVISCTNNCNPSVMLAAGLLAKKAVEIGLRVKPYIRTSLSPGSGMVTHYLSSS 560
Cdd:PRK12881 410 AQ----------TSNGVDLPDGAVAIAAITSCTNTSNPSVLIAAGLLAKKAVERGLTVKPWVKTSLAPGSKVVTEYLERA 479
                        570       580       590       600       610       620       630       640
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 561 GVLPYLSKLGFDIVGYGCSTCVGNTAPLSEAVLNAVKQGDLVTCGVLSGNKHFEGRLCDCVRANYLASPPLVVAYAIAGT 640
Cdd:PRK12881 480 GLLPYLEKLGFGIVGYGCTTCIGNSGPLTPEIEQAITKNDLVAAAVLSGNRNFEGRIHPNIKANFLASPPLVVAYALAGT 559
                        650       660       670       680
                 ....*....|....*....|....*....|....*....|....*
gi 568961828 641 VNIDFQTEPLGTDSTGKEIYLHDIWPSREEVHQMEEEHVILSMFK 685
Cdd:PRK12881 560 VRRDLMTEPLGKGKDGRPVYLKDIWPSSAEIDALVAFAVDPEDFR 604
AcnA_IRP cd01586
Aconitase A catalytic domain; Aconitase A catalytic domain. This is the major form of the TCA ...
85-641 0e+00

Aconitase A catalytic domain; Aconitase A catalytic domain. This is the major form of the TCA cycle enzyme aconitate hydratase, also known as aconitase and citrate hydrolyase. It includes bacterial and archaeal aconitase A, and the eukaryotic cytosolic form of aconitase. This group also includes sequences that have been shown to act as an iron-responsive element (IRE) binding protein in animals and may have the same role in other eukaryotes.


Pssm-ID: 153136  Cd Length: 404  Bit Score: 701.75  E-value: 0e+00
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  85 RVVLQDFTGIPAMVDFAAMREAVKTLGGDPKKVHPACPTDLTVDHSLQIDFSKCaiqnapnpgggdlqkagklsplkvqs 164
Cdd:cd01586    1 RVILQDFTGVPAVVDLAAMRDAVKRLGGDPEKINPLIPVDLVIDHSVQVDFYGT-------------------------- 54
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 165 kklpcrgqttcrgscdsgelsrnsgtfssqientpvlcpfhlqpvpePETVLKNQEVEFGRNRERLQFFKWSSGAFKNVA 244
Cdd:cd01586   55 -----------------------------------------------ADALAKNMKLEFERNRERYEFLKWGQKAFKNLR 87
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 245 VIPPGTGMAHQVNLEYLSRVVF----EETDLLFPDSVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVG 320
Cdd:cd01586   88 VVPPGTGIIHQVNLEYLARVVFtseeDGDGVAYPDSVVGTDSHTTMINGLGVLGWGVGGIEAEAVMLGQPISMLLPEVVG 167
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 321 CELTGSSNAFVTSIDIVLGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDnvtlrhlehtg 400
Cdd:cd01586  168 VKLTGKLRPGVTATDLVLTVTQMLRKVGVVGKFVEFFGPGVAKLSVADRATIANMAPEYGATCGFFPVD----------- 236
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 401 fdktklesmekylkavklfrndenssepeySQVIQINLNSIVASVSGPKRPQDRVAVtdmksdfqaclnekvgfkgfqva 480
Cdd:cd01586  237 ------------------------------TQVVELDLSTVEPSVSGPKRPQDRVPL----------------------- 263
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 481 aekqsdtvsvrydgseyklsHGSVVIAAVISCTNNCNPSVMLAAGLLAKKAVEIGLRVKPYIRTSLSPGSGMVTHYLSSS 560
Cdd:cd01586  264 --------------------HGSVVIAAITSCTNTSNPSVMLAAGLLAKKAVELGLKVKPYVKTSLAPGSRVVTKYLEAS 323
                        490       500       510       520       530       540       550       560
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 561 GVLPYLSKLGFDIVGYGCSTCVGNTAPLSEAVLNAVKQGDLVTCGVLSGNKHFEGRLCDCVRANYLASPPLVVAYAIAGT 640
Cdd:cd01586  324 GLLPYLEKLGFHVVGYGCTTCIGNSGPLPEEVEEAIKENDLVVAAVLSGNRNFEGRIHPLVRANYLASPPLVVAYALAGT 403

                 .
gi 568961828 641 V 641
Cdd:cd01586  404 V 404
Aconitase pfam00330
Aconitase family (aconitate hydratase);
78-639 0e+00

Aconitase family (aconitate hydratase);


Pssm-ID: 459764  Cd Length: 460  Bit Score: 535.85  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828   78 EVPFFPARVVLQDFTGIPAMVDFAAMREAVKTLGGDPKKVHPACPTDLTVDHSlqidfskcaiqnapnpgggdlqkagkl 157
Cdd:pfam00330  15 SLLYIPDRVLMHDVTSPQAFVDLRAAGRAVRRPGGTPATIDHLVPTDLVIDHA--------------------------- 67
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  158 splkvqskklpcrgqttcrgscdsgelsrnsgtfssqientpvlcpfhlqpvpePETVLKNQEVEFGRNRERLQFFKWSS 237
Cdd:pfam00330  68 ------------------------------------------------------PDALDKNIEDEISRNKEQYDFLEWNA 93
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  238 GAFkNVAVIPPGTGMAHQVNLEYLsrvvfeetdLLFPD-SVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLP 316
Cdd:pfam00330  94 KKF-GIRFVPPGQGIVHQVGLEYG---------LALPGmTIVGTDSHTTTHGGLGALAFGVGGSEAEHVLATQPLEMKKP 163
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  317 EVVGCELTGSSNAFVTSIDIVLGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHL 396
Cdd:pfam00330 164 KVVGVKLTGKLPPGVTAKDVILAIIGKLGVKGGTGKVVEFFGPGVRSLSMEGRATICNMAIEYGATAGLFPPDETTFEYL 243
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  397 EHTGFDKTKLEsmEKYLKAVKLFRNDENsSEPEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKSD-FQACLNEKVGFK 475
Cdd:pfam00330 244 RATGRPEAPKG--EAYDKAVAWKTLASD-PGAEYDKVVEIDLSTIEPMVTGPTRPQDAVPLSELVPDpFADAVKRKAAER 320
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  476 gfqvaaekqsdTVSVRYDGSEYKLSHGSVVIAAVISCTNNCNPSVMLAAGLLaKKAVEIGLRVKPYIRTSLSPGSGMVTH 555
Cdd:pfam00330 321 -----------ALEYMGLGPGTPLSDGKVDIAFIGSCTNSSIEDLRAAAGLL-KKAVEKGLKVAPGVKASVVPGSEVVRA 388
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  556 YLSSSGVLPYLSKLGFDIVGYGCSTCVGNTAPLSEavlnavkqGDlvtCGVLSGNKHFEGRLCDCVRAnYLASPPLVVAY 635
Cdd:pfam00330 389 YAEAEGLDKILEEAGFEWRGPGCSMCIGNSDRLPP--------GE---RCVSSSNRNFEGRQGPGGRT-HLASPALVAAA 456

                  ....
gi 568961828  636 AIAG 639
Cdd:pfam00330 457 AIAG 460
Aconitase cd01351
Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and ...
85-641 3.38e-133

Aconitase catalytic domain; Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle; Aconitase catalytic domain. Aconitase (aconitate hydratase) catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. Cis-aconitate is formed as an intermediate product during the course of the reaction. In eukaryotes two isozymes of aconitase are known to exist: one found in the mitochondrial matrix and the other found in the cytoplasm. Aconitase, in its active form, contains a 4Fe-4S iron-sulfur cluster; three cysteine residues have been shown to be ligands of the 4Fe-4S cluster. This is the Aconitase core domain, including structural domains 1, 2 and 3, which binds the Fe-S cluster. The aconitase family also contains the following proteins: - Iron-responsive element binding protein (IRE-BP), a cytosolic protein that binds to iron-responsive elements (IREs). IREs are stem-loop structures found in the 5'UTR of ferritin, and delta aminolevulinic acid synthase mRNAs, and in the 3'UTR of transferrin receptor mRNA. IRE-BP also express aconitase activity. - 3-isopropylmalate dehydratase (isopropylmalate isomerase), the enzyme that catalyzes the second step in the biosynthesis of leucine. - Homoaconitase (homoaconitate hydratase), an enzyme that participates in the alpha-aminoadipate pathway of lysine biosynthesis and that converts cis-homoaconitate into homoisocitric acid.


Pssm-ID: 153129 [Multi-domain]  Cd Length: 389  Bit Score: 398.79  E-value: 3.38e-133
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828  85 RVVLQDFTGIPAMVDFAAMREAVKtlggdpkkVHPACPTDLTVDHSLQIDFskcaiqnapnpgggdlqkagklsplkvqs 164
Cdd:cd01351    1 RVMLQDATGPMAMKAFEILAALGK--------VADPSQIACVHDHAVQLEK----------------------------- 43
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 165 kklpcrgqttcrgscdsgelsrnsgtfssqientpvlcpfhlqpvpepetvlknqevefGRNRERLQFFKWSSgAFKNVA 244
Cdd:cd01351   44 -----------------------------------------------------------PVNNEGHKFLSFFA-ALQGIA 63
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 245 VIPPGTGMAHQVNLEYLsrvvfeetdLLFPDSVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVGCELT 324
Cdd:cd01351   64 FYRPGVGIIHQIMVENL---------ALPGDLLVGSDSHTTSYGGLGAISTGAGGGDVAFVMAGGPAWLKKPEVVGVNLT 134
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 325 GSSNAFVTSIDIVLGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHLEHTGFDKT 404
Cdd:cd01351  135 GKLSPGVTGKDVVLKLGGIVGVDGVLNRIVEFYGEGVSSLSIEDRLTICNMMAELGATTGIFPEDKTTLKWLEATGRPLL 214
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 405 KLesmekylkAVKLFRNDENSS-EPEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKSdfqaclnekvgfkgfqvaaek 483
Cdd:cd01351  215 KN--------LWLAFPEELLADeGAEYDQVIEIDLSELEPDISGPNRPDDAVSVSEVEG--------------------- 265
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 484 qsdtvsvrydgseyklshGSVVIAAVISCTNNCnPSVMLAAGLLAKKAVeiglrVKPYIRTSLSPGSGMVTHYLSSSGVL 563
Cdd:cd01351  266 ------------------TKIDQVLIGSCTNNR-YSDMLAAAKLLKGAK-----VAPGVRLIVTPGSRMVYATLSREGYY 321
                        490       500       510       520       530       540       550
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568961828 564 PYLSKLGFDIVGYGCSTCVGNTAPLseavlnavkqGDLVTCGVLSGNKHFEGRLCDCVRANYLASPPLVVAYAIAGTV 641
Cdd:cd01351  322 EILVDSGARILPPGCGPCMGNGARL----------VADGEVGVSSGNRNFPGRLGTYERHVYLASPELAAATAIAGKI 389
AcnA_Bact cd01585
Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA ...
248-641 3.19e-44

Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle; Bacterial Aconitase-like catalytic domain. Aconitase (aconitate hydratase or citrate hydrolyase) catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. Cis-aconitate is formed as an intermediate product during the course of the reaction. This distinct subfamily is found only in bacteria and Archaea. Its exact characteristics are not known.


Pssm-ID: 153135  Cd Length: 380  Bit Score: 163.39  E-value: 3.19e-44
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 248 PGTGMAHQVNLEYLSRvvfeetdllfP-DSVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVGCELTGS 326
Cdd:cd01585   66 PGNGICHQVHLERFAV----------PgKTLLGSDSHTPTAGGLGMLAIGAGGLDVALAMAGEPYYIPMPKVVGVRLTGE 135
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 327 SNAFVTSIDIVLGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHLEHTGFDKTKL 406
Cdd:cd01585  136 LPPWVTAKDVILELLRRLTVKGGVGKIFEYTGPGVATLSVPERATITNMGAELGATTSIFPSDERTREFLAAQGREDDWV 215
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 407 EsmekyLKAvklfrnDENSsepEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKsdfqaclnekvGFKGFQVaaekqsd 486
Cdd:cd01585  216 E-----LAA------DADA---EYDEEIEIDLSELEPLIARPHSPDNVVPVREVA-----------GIKVDQV------- 263
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 487 tvsvrydgseyklshgsvviaAVISCTNNCNPSVMLAAGLLAkkaveiGLRVKPYIRTSLSPGSGMVTHYLSSSGVLPYL 566
Cdd:cd01585  264 ---------------------AIGSCTNSSYEDLMTVAAILK------GRRVHPHVSMVVAPGSKQVLEMLARNGALADL 316
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568961828 567 SKLGFDIVGYGCSTCVG-NTAPLSEAVlnavkqgdlvtcGVLSGNKHFEGRLCDCVRANYLASPPLVVAYAIAGTV 641
Cdd:cd01585  317 LAAGARILESACGPCIGmGQAPPTGGV------------SVRTFNRNFEGRSGTKDDLVYLASPEVAAAAALTGVI 380
AcnA_Mitochondrial cd01584
Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA ...
226-640 2.08e-42

Aconitase catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle; Mitochondrial aconitase A catalytic domain. Aconitase (also known as aconitate hydratase and citrate hydro-lyase) catalyzes the reversible isomerization of citrate and isocitrate as part of the TCA cycle. Cis-aconitate is formed as an intermediary product during the course of the reaction. In eukaryotes two isozymes of aconitase are known to exist: one found in the mitochondrial matrix and the other found in the cytoplasm. This is the mitochondrial form. The mitochondrial product is coded by a nuclear gene. Most members of this subfamily are mitochondrial but there are some bacterial members.


Pssm-ID: 153134  Cd Length: 412  Bit Score: 159.14  E-value: 2.08e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 226 NRERLQFFKwSSGAFKNVAVIPPGTGMAHQVNLEYLSrvvfeetdllFPDS-VVGTDSHITMVNGLGILGWGVGGIETEA 304
Cdd:cd01584   53 NKEVYDFLA-SAGAKYGIGFWKPGSGIIHQIVLENYA----------FPGLlMIGTDSHTPNAGGLGGIAIGVGGADAVD 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 305 VMLGLPVTLTLPEVVGCELTGSSNAFVTSIDIVLGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILS 384
Cdd:cd01584  122 VMAGIPWELKCPKVIGVKLTGKLSGWTSPKDVILKVAGILTVKGGTGAIVEYFGPGVDSLSCTGMGTICNMGAEIGATTS 201
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 385 FFPVDNVTLRHLEHTGfdKTKLESMEKYLKAvKLFRNDENSsepEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKSdf 464
Cdd:cd01584  202 VFPYNERMKKYLKATG--RAEIADLADEFKD-DLLVADEGA---EYDQLIEINLSELEPHINGPFTPDLATPVSKFKE-- 273
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 465 qaclnekvgfkgfqvAAEKQSDTVSVRydgseyklshgsvvIAAVISCTNNCNPSVMLAAGlLAKKAVEIGLRVKpyIRT 544
Cdd:cd01584  274 ---------------VAEKNGWPLDLR--------------VGLIGSCTNSSYEDMGRAAS-IAKQALAHGLKCK--SIF 321
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 545 SLSPGSGMVTHYLSSSGVLPYLSKLGFDIVGYGCSTCVGntaplsEAVLNAVKQGDLVTCgVLSGNKHFEGRlCDCVRA- 623
Cdd:cd01584  322 TITPGSEQIRATIERDGLLQTFRDAGGIVLANACGPCIG------QWDRKDIKKGEKNTI-VTSYNRNFTGR-NDANPAt 393
                        410
                 ....*....|....*...
gi 568961828 624 -NYLASPPLVVAYAIAGT 640
Cdd:cd01584  394 hAFVASPEIVTAMAIAGT 411
PRK07229 PRK07229
aconitate hydratase; Validated
247-639 4.04e-42

aconitate hydratase; Validated


Pssm-ID: 235974 [Multi-domain]  Cd Length: 646  Bit Score: 162.62  E-value: 4.04e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 247 PPGTGMAHQVNLEYLSrvvfeetdllFP-DSVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVGCELTG 325
Cdd:PRK07229  94 KPGNGICHQVHLERFA----------FPgKTLLGSDSHTPTAGGLGMLAIGAGGLDVALAMAGGPYYLKMPKVVGVKLTG 163
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 326 SSNAFVTSIDIVLgitKHLRQVGVAG---KFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHLEHTGFD 402
Cdd:PRK07229 164 KLPPWVSAKDVIL---ELLRRLTVKGgvgKIIEYFGPGVATLSVPERATITNMGAELGATTSIFPSDERTREFLKAQGRE 240
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 403 KTKLEsmekyLKAvklfrnDENSsepEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKsdfqaclnekvgfkgfqvaae 482
Cdd:PRK07229 241 DDWVE-----LLA------DPDA---EYDEVIEIDLSELEPLIAGPHSPDNVVPVSEVA--------------------- 285
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 483 kqsdtvsvrydgseyklshGSVVIAAVI-SCTnncNPS---VMLAAGLLAKKaveiglRVKPyiRTSL--SPGSGMVTHY 556
Cdd:PRK07229 286 -------------------GIKVDQVLIgSCT---NSSyedLMRAASILKGK------KVHP--KVSLviNPGSRQVLEM 335
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 557 LSSSGVLPYLSKLGFDIVGYGCSTCVGNT-APLSEAVLnavkqgdlvtcgVLSGNKHFEGR---LCDCVranYLASPPLV 632
Cdd:PRK07229 336 LARDGALADLIAAGARILENACGPCIGMGqAPATGNVS------------LRTFNRNFPGRsgtKDAQV---YLASPETA 400

                 ....*..
gi 568961828 633 VAYAIAG 639
Cdd:PRK07229 401 AASALTG 407
IPMI cd01583
3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and ...
264-641 2.92e-32

3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate; Aconatase-like catalytic domain of 3-isopropylmalate dehydratase and related uncharacterized proteins. 3-isopropylmalate dehydratase catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate, via the formation of 2-isopropylmaleate 3-isopropylmalate. IPMI is involved in fungal and bacterial leucine biosynthesis and is also found in eukaryotes.


Pssm-ID: 153133  Cd Length: 382  Bit Score: 129.23  E-value: 2.92e-32
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 264 VVFEETDLLFP-DSVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVGCELTGSSNAFVTSIDIVLGITK 342
Cdd:cd01583   74 VILPEKGLTLPgMTIVGGDSHTCTHGAFGAFATGIGTTDVAHVLATGKLWFRVPETMRVNVEGKLPPGVTAKDVILYIIG 153
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 343 HLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHLEHTGFdktklesmekylKAVKLFRND 422
Cdd:cd01583  154 KIGVDGATYKAMEFAGEAIESLSMEERMTLCNMAIEAGAKAGIVAPDETTFEYLKGRGK------------AYWKELKSD 221
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 423 ENSsepEYSQVIQINLNSIVASVSGPKRPQDRVAVtdmksdfqaclNEKVGFKGFQVaaekqsdtvsvrYDGseyklshg 502
Cdd:cd01583  222 EDA---EYDKVVEIDASELEPQVAWPHSPDNVVPV-----------SEVEGIKIDQV------------FIG-------- 267
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 503 svviaaviSCTNNCNPSVMLAAGLLAKKaveiglRVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFDIVGYGCSTCV 582
Cdd:cd01583  268 --------SCTNGRLEDLRAAAEILKGR------KVADGVRLIVVPASQRVYKQAEKEGLIEIFIEAGAEVRPPGCGACL 333
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 568961828 583 GntapLSEAVLNAvkqGDLVtcgVLSGNKHFEGRLCDCVRANYLASPPLVVAYAIAGTV 641
Cdd:cd01583  334 G----GHMGVLAP---GERC---VSTSNRNFKGRMGSPGARIYLASPATAAASAITGEI 382
LeuC COG0065
Homoaconitase/3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism] ...
277-641 8.16e-30

Homoaconitase/3-isopropylmalate dehydratase large subunit [Amino acid transport and metabolism]; Homoaconitase/3-isopropylmalate dehydratase large subunit is part of the Pathway/BioSystem: Isoleucine, leucine, valine biosynthesis


Pssm-ID: 439835  Cd Length: 417  Bit Score: 122.45  E-value: 8.16e-30
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 277 VVGTDSHITMVNGLGILGWGVGGIETEAVMlglpVTLTL----PEVVGCELTGSSNAFVTSIDIVLGItkhLRQVGVAG- 351
Cdd:COG0065  117 IVGGDSHTCTHGAFGAFAFGIGTTDVAHVL----ATGTLwfkvPETMRIEVTGKLPPGVTAKDLILAI---IGKIGADGa 189
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 352 --KFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHLEHTGFdktklesmekylKAVKLFRNDENSsepE 429
Cdd:COG0065  190 tgKAIEFAGEAIRALSMEERMTLCNMAIEAGAKAGIIAPDETTFEYLKGRPF------------APWRTLKSDEDA---V 254
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 430 YSQVIQINLNSIVASVSGPKRPQDRVAVTDMksdfqaclnekvgfKGFQVaaekqsDTVsvrydgseyklshgsvviaaV 509
Cdd:COG0065  255 YDKEVEIDASDLEPQVAWPHSPDNVVPVSEL--------------EGIKI------DQV--------------------F 294
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 510 I-SCTNNcnpsvML-----AAGLLAkkaveiGLRVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFDIVGYGCSTCVG 583
Cdd:COG0065  295 IgSCTNG-----RIedlraAAEILK------GRKVAPGVRAIVVPGSQEVYRQAEAEGLDEIFIEAGAEWREPGCGMCLG 363
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 568961828 584 -NTAPLSEavlnavkqGDLVtcgVLSGNKHFEGRLCDCVRANYLASPPLVVAYAIAGTV 641
Cdd:COG0065  364 mNMGVLAP--------GERC---ASTSNRNFEGRMGSPGSRTYLASPATAAASAIAGRI 411
PRK00402 PRK00402
3-isopropylmalate dehydratase large subunit; Reviewed
249-639 1.84e-23

3-isopropylmalate dehydratase large subunit; Reviewed


Pssm-ID: 234748  Cd Length: 418  Bit Score: 103.72  E-value: 1.84e-23
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 249 GTGMAHQVnleylsrvvFEETDLLFP-DSVVGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVGCELTGSS 327
Cdd:PRK00402  97 GEGICHQV---------LPEKGLVRPgDVVVGADSHTCTYGALGAFATGMGSTDMAAAMATGKTWFKVPETIKVVLEGKL 167
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 328 NAFVTSIDIVLGItkhLRQVGVAG---KFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHLEhtgfdkt 404
Cdd:PRK00402 168 PPGVTAKDVILHI---IGDIGVDGatyKALEFTGETIEALSMDERMTLANMAIEAGAKAGIFAPDEKTLEYLK------- 237
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 405 klesmEKYLKAVKLFRNDENSsepEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKsdfqaclNEKVgfkgfqvaaekq 484
Cdd:PRK00402 238 -----ERAGRDYKPWKSDEDA---EYEEVYEIDLSKLEPQVAAPHLPDNVKPVSEVE-------GTKV------------ 290
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 485 sDTVsvrydgseyklshgsvviaaVI-SCTNncnpsvmlaaGLLA--KKAVEI--GLRVKPYIRTSLSPGSGMVTHYLSS 559
Cdd:PRK00402 291 -DQV--------------------FIgSCTN----------GRLEdlRIAAEIlkGRKVAPGVRLIVIPASQKIYLQALK 339
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 560 SGVLPYLSKLGFdIVGY-GCSTCVGNtaplSEAVLnavkqGDLVTCgVLSGNKHFEGRLCDCVRANYLASPPLVVAYAIA 638
Cdd:PRK00402 340 EGLIEIFVDAGA-VVSTpTCGPCLGG----HMGVL-----APGEVC-LSTTNRNFKGRMGSPESEVYLASPAVAAASAVT 408

                 .
gi 568961828 639 G 639
Cdd:PRK00402 409 G 409
PRK12466 PRK12466
3-isopropylmalate dehydratase large subunit;
264-639 5.10e-22

3-isopropylmalate dehydratase large subunit;


Pssm-ID: 183543  Cd Length: 471  Bit Score: 99.98  E-value: 5.10e-22
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 264 VVFEETDLLFPDSVVGT-DSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVGCELTGSSNAFVTSIDIVLGITK 342
Cdd:PRK12466 112 VVAPELGLTLPGMVIVCgDSHTTTYGALGALAFGIGTSEVEHVLATQTLVYRKPKTMRVRVDGELPPGVTAKDLILALIA 191
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 343 HLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDNVTLRHLEHTGFDkTKLESMEKYLKAVKLFRND 422
Cdd:PRK12466 192 RIGADGATGYAIEFAGEAIRALSMEGRMTLCNMAVEAGARGGLIAPDETTFDYLRGRPRA-PKGALWDAALAYWRTLRSD 270
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 423 ENSsepEYSQVIQINLNSIVASVSGPKRPQDRVAVTDMKSDFQACLNekvgfkgfqvAAEKQSDTVSVRYDGSEYKLSHG 502
Cdd:PRK12466 271 ADA---VFDREVEIDAADIAPQVTWGTSPDQAVPITGRVPDPAAEAD----------PARRAAMERALDYMGLTPGTPLA 337
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 503 SVVIAAVI--SCTNNCNPSVMLAAGLLAkkaveiGLRVKPYIRTSLSPGSGMVTHYLSSSGVLPYLSKLGFDIVGYGCST 580
Cdd:PRK12466 338 GIPIDRVFigSCTNGRIEDLRAAAAVLR------GRKVAPGVRAMVVPGSGAVRRQAEAEGLARIFIAAGFEWREPGCSM 411
                        330       340       350       360       370       380
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568961828 581 CVGntaplseavLNavkqGDLVTCG---VLSGNKHFEGRLCDCVRAnYLASPPLVVAYAIAG 639
Cdd:PRK12466 412 CLA---------MN----DDVLAPGercASTTNRNFEGRQGPGART-HLMSPAMVAAAAVAG 459
Homoaconitase cd01582
Homoaconitase and other uncharacterized proteins of the Aconitase family; Homoaconitase ...
247-641 2.65e-18

Homoaconitase and other uncharacterized proteins of the Aconitase family; Homoaconitase catalytic domain. Homoaconitase and other uncharacterized proteins of the Aconitase family. Homoaconitase is part of an unusual lysine biosynthesis pathway found only in filamentous fungi, in which lysine is synthesized via the alpha-aminoadipate pathway. In this pathway, homoaconitase catalyzes the conversion of cis-homoaconitic acid into homoisocitric acid. The reaction mechanism is believed to be similar to that of other aconitases.


Pssm-ID: 153132 [Multi-domain]  Cd Length: 363  Bit Score: 87.28  E-value: 2.65e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 247 PPGTGMAHQVNLEylsrvvfeeTDLLFPDSV-VGTDSHITMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVGCELTG 325
Cdd:cd01582   64 PAGRGIGHQIMIE---------EGYAFPGTLaVASDSHSNMYGGVGCLGTPIVRTDAAAIWATGQTWWQIPPVAKVELKG 134
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 326 SSNAFVTSIDIVLGITKHLRQVGVAGKFVEFFGSGVSQLSIVDRTTIANMCPEYGAILSFFPVDnvtlrhlehtgfdktk 405
Cdd:cd01582  135 QLPKGVTGKDVIVALCGLFNKDQVLNHAIEFTGSGLNSLSVDTRLTIANMTTEWGALSGLFPTD---------------- 198
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 406 lesmekylkAVKLFrndenssepeysqviqINLNSIVASVSGPKrpqdrvavtdmksdfqaclnekvgfkgfqvaaekqs 485
Cdd:cd01582  199 ---------AKHLI----------------LDLSTLSPYVSGPN------------------------------------ 217
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 486 dtvSVRYDGSEYKLSHGSVVI--AAVISCTNNCNPSVMLAAGLLAKKAVEIG-LRVKPYIRTSLSPGSGMVTHYLSSSGV 562
Cdd:cd01582  218 ---SVKVSTPLKELEAQNIKInkAYLVSCTNSRASDIAAAADVVKGKKEKNGkIPVAPGVEFYVAAASSEVQAAAEKNGD 294
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568961828 563 LPYLSKLGFDIVGYGCSTCVGNTAPLseavlnaVKQGDLvtcGVLSGNKHFEGRLCDCVRANYLASPPLVVAYAIAGTV 641
Cdd:cd01582  295 WQTLLEAGATPLPAGCGPCIGLGQGL-------LEPGEV---GISATNRNFKGRMGSTEALAYLASPAVVAASAISGKI 363
PRK11413 PRK11413
putative hydratase; Provisional
277-378 6.46e-06

putative hydratase; Provisional


Pssm-ID: 183125 [Multi-domain]  Cd Length: 751  Bit Score: 49.62  E-value: 6.46e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568961828 277 VVGTDSHiTMVNGLGILGWGVGGIETEAVMLGLPVTLTLPEVVGCELTGSSNAFVTSIDIVLGITKHLRQVG-VAGKFVE 355
Cdd:PRK11413 145 ILGSDSH-TRYGALGTMAVGEGGGELVKQLLNDTYDIDYPGVVAVYLTGKPAPGVGPQDVALAIIGAVFKNGyVKNKVME 223
                         90       100
                 ....*....|....*....|...
gi 568961828 356 FFGSGVSQLSIVDRTTIANMCPE 378
Cdd:PRK11413 224 FVGPGVSALSTDFRNGVDVMTTE 246
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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