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Conserved domains on  [gi|1039794679|ref|XP_006511622|]
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protein FAM219B isoform X2 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
FAM219A super family cl21117
Protein family FAM219A; This protein family, FAM219A is a domain of unknown function. This ...
 120-174 7.05e-25

Protein family FAM219A; This protein family, FAM219A is a domain of unknown function. This protein family has been found in eukaryotes. Proteins in this family are typically between 144 and 191 amino acids in length. There are two conserved sequence motifs: QLL and LDE.


The actual alignment was detected with superfamily member pfam15260:

Pssm-ID: 464600  Cd Length: 124  Bit Score: 92.96  E-value: 7.05e-25
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1039794679 120 KKHRDHAKAVLRRKGML-GALTNRPDSSGKRSVKFNKGYTALSQSPDENLVSLDSD 174
Cdd:pfam15260   1 QKHRELAKAALRKKGLLgGAVLQQPRSGAKRSVKFNKGYTALSQSPEENLVSLDSD 56
 
Name Accession Description Interval E-value
FAM219A pfam15260
Protein family FAM219A; This protein family, FAM219A is a domain of unknown function. This ...
 120-174 7.05e-25

Protein family FAM219A; This protein family, FAM219A is a domain of unknown function. This protein family has been found in eukaryotes. Proteins in this family are typically between 144 and 191 amino acids in length. There are two conserved sequence motifs: QLL and LDE.


Pssm-ID: 464600  Cd Length: 124  Bit Score: 92.96  E-value: 7.05e-25
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1039794679 120 KKHRDHAKAVLRRKGML-GALTNRPDSSGKRSVKFNKGYTALSQSPDENLVSLDSD 174
Cdd:pfam15260   1 QKHRELAKAALRKKGLLgGAVLQQPRSGAKRSVKFNKGYTALSQSPEENLVSLDSD 56
 
Name Accession Description Interval E-value
FAM219A pfam15260
Protein family FAM219A; This protein family, FAM219A is a domain of unknown function. This ...
 120-174 7.05e-25

Protein family FAM219A; This protein family, FAM219A is a domain of unknown function. This protein family has been found in eukaryotes. Proteins in this family are typically between 144 and 191 amino acids in length. There are two conserved sequence motifs: QLL and LDE.


Pssm-ID: 464600  Cd Length: 124  Bit Score: 92.96  E-value: 7.05e-25
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1039794679 120 KKHRDHAKAVLRRKGML-GALTNRPDSSGKRSVKFNKGYTALSQSPDENLVSLDSD 174
Cdd:pfam15260   1 QKHRELAKAALRKKGLLgGAVLQQPRSGAKRSVKFNKGYTALSQSPEENLVSLDSD 56
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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