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Conserved domains on  [gi|569002914|ref|XP_006525537|]
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synaptopodin isoform X3 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 700-972 1.13e-06

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.02  E-value: 1.13e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  700 SRATSSRTPSRTVSPRAASPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGLYT-APVQDSLQPTAVS----------- 767
Cdd:PHA03247 2467 SLLLGELFPGAPVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPdEPVGEPVHPRMLTwirgleelasd 2546

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  768 ------PTYSSDISPVSPSRAwSPRAKQAPRP------SFSTRNAGIEAQDRPE------------SLPTSPPWTPAASR 823
Cdd:PHA03247 2547 dagdppPPLPPAAPPAAPDRS-VPPPRPAPRPsepavtSRARRPDAPPQSARPRapvddrgdprgpAPPSPLPPDTHAPD 2625

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  824 PPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRSETEARPPSRQLQALL---ARNIINAARRKSAS 900
Cdd:PHA03247 2626 PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAArptVGSLTSLADPPPPP 2705

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 569002914  901 PRPAPAETLRPFSPPQGPPPPPARMRSPQ-------PASPARNFRGAAFSPIPRSPLPIGPSSCASPRSPQAAPSRPFP 972
Cdd:PHA03247 2706 PTPEPAPHALVSATPLPPGPAAARQASPAlpaapapPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLT 2784
PRK13914 super family cl36314
invasion associated endopeptidase;
139-256 4.08e-06

invasion associated endopeptidase;


The actual alignment was detected with superfamily member PRK13914:

Pssm-ID: 237555 [Multi-domain]  Cd Length: 481  Bit Score: 50.57  E-value: 4.08e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  139 EKVASEEEEVPLVvylKENAALLTANGLHLSQSRETQQSSPNPPDTEVPSPAADINQNPSSPNATLTTLASSSHHSQPTA 218
Cdd:PRK13914  259 EAPAAEKQAAPVV---KENTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTPSK 335

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 569002914  219 DINQNPPAAITPVPqNSSQAQCSPNGTLDSKPGTLCAD 256
Cdd:PRK13914  336 NTNTNTNSNTNTNS-NTNANQGSSNNNSNSSASAIIAE 372
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 176-480 1.78e-04

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.70  E-value: 1.78e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  176 QSSPNPPDTEVPSPAADINQNPSSPNATLTTLASSSHHSQPTADINQNPPAAITPVPQNSSQAQCSPNGTLDSKPGtlca 255
Cdd:PHA03247 2730 QASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPA---- 2805

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  256 dDGQSPVPAeevRSSILLIDKVSAPPSAASTFSREATPLSSSGPPAADLMSSSLLIDMQPSTLVAPAEQEVPghvAVTTP 335
Cdd:PHA03247 2806 -DPPAAVLA---PAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAA---KPAAP 2878

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  336 TKVYSEvhlTLAKPAsvVNRTARPFGIQSPGTSQIEQSPMMGRRQfgEKAWAPPASSMADRSPQPQRHIMSRSPMVERRL 415
Cdd:PHA03247 2879 ARPPVR---RLARPA--VSRSTESFALPPDQPERPPQPQAPPPPQ--PQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAG 2951

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  416 LGQRSPVLERRPLGNFTP--------------PPTYAETLSTAP----VASRVRSPPSYSTLYPSSDPKPSHLKGQVAPA 477
Cdd:PHA03247 2952 AGEPSGAVPQPWLGALVPgrvavprfrvpqpaPSREAPASSTPPltghSLSRVSSWASSLALHEETDPPPVSLKQTLWPP 3031


                  ...
gi 569002914  478 NKT 480
Cdd:PHA03247 3032 DDT 3034
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 700-972 1.13e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.02  E-value: 1.13e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  700 SRATSSRTPSRTVSPRAASPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGLYT-APVQDSLQPTAVS----------- 767
Cdd:PHA03247 2467 SLLLGELFPGAPVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPdEPVGEPVHPRMLTwirgleelasd 2546

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  768 ------PTYSSDISPVSPSRAwSPRAKQAPRP------SFSTRNAGIEAQDRPE------------SLPTSPPWTPAASR 823
Cdd:PHA03247 2547 dagdppPPLPPAAPPAAPDRS-VPPPRPAPRPsepavtSRARRPDAPPQSARPRapvddrgdprgpAPPSPLPPDTHAPD 2625

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  824 PPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRSETEARPPSRQLQALL---ARNIINAARRKSAS 900
Cdd:PHA03247 2626 PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAArptVGSLTSLADPPPPP 2705

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 569002914  901 PRPAPAETLRPFSPPQGPPPPPARMRSPQ-------PASPARNFRGAAFSPIPRSPLPIGPSSCASPRSPQAAPSRPFP 972
Cdd:PHA03247 2706 PTPEPAPHALVSATPLPPGPAAARQASPAlpaapapPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLT 2784
PRK13914 PRK13914
invasion associated endopeptidase;
139-256 4.08e-06

invasion associated endopeptidase;


Pssm-ID: 237555 [Multi-domain]  Cd Length: 481  Bit Score: 50.57  E-value: 4.08e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  139 EKVASEEEEVPLVvylKENAALLTANGLHLSQSRETQQSSPNPPDTEVPSPAADINQNPSSPNATLTTLASSSHHSQPTA 218
Cdd:PRK13914  259 EAPAAEKQAAPVV---KENTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTPSK 335

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 569002914  219 DINQNPPAAITPVPqNSSQAQCSPNGTLDSKPGTLCAD 256
Cdd:PRK13914  336 NTNTNTNSNTNTNS-NTNANQGSSNNNSNSSASAIIAE 372
PHA03247 PHA03247
large tegument protein UL36; Provisional
 176-480 1.78e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.70  E-value: 1.78e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  176 QSSPNPPDTEVPSPAADINQNPSSPNATLTTLASSSHHSQPTADINQNPPAAITPVPQNSSQAQCSPNGTLDSKPGtlca 255
Cdd:PHA03247 2730 QASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPA---- 2805

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  256 dDGQSPVPAeevRSSILLIDKVSAPPSAASTFSREATPLSSSGPPAADLMSSSLLIDMQPSTLVAPAEQEVPghvAVTTP 335
Cdd:PHA03247 2806 -DPPAAVLA---PAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAA---KPAAP 2878

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  336 TKVYSEvhlTLAKPAsvVNRTARPFGIQSPGTSQIEQSPMMGRRQfgEKAWAPPASSMADRSPQPQRHIMSRSPMVERRL 415
Cdd:PHA03247 2879 ARPPVR---RLARPA--VSRSTESFALPPDQPERPPQPQAPPPPQ--PQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAG 2951

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  416 LGQRSPVLERRPLGNFTP--------------PPTYAETLSTAP----VASRVRSPPSYSTLYPSSDPKPSHLKGQVAPA 477
Cdd:PHA03247 2952 AGEPSGAVPQPWLGALVPgrvavprfrvpqpaPSREAPASSTPPltghSLSRVSSWASSLALHEETDPPPVSLKQTLWPP 3031


                  ...
gi 569002914  478 NKT 480
Cdd:PHA03247 3032 DDT 3034
 
Name Accession Description Interval E-value
PHA03247 PHA03247
large tegument protein UL36; Provisional
 700-972 1.13e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 53.02  E-value: 1.13e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  700 SRATSSRTPSRTVSPRAASPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGLYT-APVQDSLQPTAVS----------- 767
Cdd:PHA03247 2467 SLLLGELFPGAPVYRRPAEARFPFAAGAAPDPGGGGPPDPDAPPAPSRLAPAILPdEPVGEPVHPRMLTwirgleelasd 2546

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  768 ------PTYSSDISPVSPSRAwSPRAKQAPRP------SFSTRNAGIEAQDRPE------------SLPTSPPWTPAASR 823
Cdd:PHA03247 2547 dagdppPPLPPAAPPAAPDRS-VPPPRPAPRPsepavtSRARRPDAPPQSARPRapvddrgdprgpAPPSPLPPDTHAPD 2625

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  824 PPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRSETEARPPSRQLQALL---ARNIINAARRKSAS 900
Cdd:PHA03247 2626 PPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAArptVGSLTSLADPPPPP 2705

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 569002914  901 PRPAPAETLRPFSPPQGPPPPPARMRSPQ-------PASPARNFRGAAFSPIPRSPLPIGPSSCASPRSPQAAPSRPFP 972
Cdd:PHA03247 2706 PTPEPAPHALVSATPLPPGPAAARQASPAlpaapapPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLT 2784
PHA03247 PHA03247
large tegument protein UL36; Provisional
 615-968 3.30e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 51.48  E-value: 3.30e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  615 SGHAELARCPSPTMSLPSSWKYTTNAPGGFRVASLSPARTPPASlyHGYLPENGVLRPEPTKQQPYQMRPSLYALSPVKE 694
Cdd:PHA03247 2578 SEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDT--HAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDD 2655

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  695 PA----KASSRATSSRTPSRTVSP--RAASPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGLYTAPVQDSLQPTAVSP 768
Cdd:PHA03247 2656 PApgrvSRPRRARRLGRAAQASSPpqRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPAL 2735

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  769 TYS--------------------SDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRPESLPTSP---PWTPAASRPP 825
Cdd:PHA03247 2736 PAApappavpagpatpggparpaRPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWdpaDPPAAVLAPA 2815

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  826 SSLDGWVSPGPWEP---GRGSSMSSPPPLPPPPPMSPSWSERSVSPLRSeteaRPPSRQLQALLARNIINAARRKSASPR 902
Cdd:PHA03247 2816 AALPPAASPAGPLPpptSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRR----RPPSRSPAAKPAAPARPPVRRLARPAV 2891

                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 569002914  903 PAPAETLrpfsppQGPPPPPARMRSPQPASPARNFRGAAFSPIPRSPLPIGPSScASPRSPQAAPS 968
Cdd:PHA03247 2892 SRSTESF------ALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRP-QPPLAPTTDPA 2950
PRK13914 PRK13914
invasion associated endopeptidase;
139-256 4.08e-06

invasion associated endopeptidase;


Pssm-ID: 237555 [Multi-domain]  Cd Length: 481  Bit Score: 50.57  E-value: 4.08e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  139 EKVASEEEEVPLVvylKENAALLTANGLHLSQSRETQQSSPNPPDTEVPSPAADINQNPSSPNATLTTLASSSHHSQPTA 218
Cdd:PRK13914  259 EAPAAEKQAAPVV---KENTNTNTATTEKKETTTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTPSK 335

                          90       100       110
                  ....*....|....*....|....*....|....*...
gi 569002914  219 DINQNPPAAITPVPqNSSQAQCSPNGTLDSKPGTLCAD 256
Cdd:PRK13914  336 NTNTNTNSNTNTNS-NTNANQGSSNNNSNSSASAIIAE 372
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
610-830 2.32e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 48.31  E-value: 2.32e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  610 YVIESSGHAELARCPSP----TMSLPSSWKYTTNAPGGFRVASLSPARTPPASLYHGYLPENGVLRPEPTKQQPyqmrPS 685
Cdd:PRK07003  328 YQIATVGRGELGLAPDEyagfTMTLLRMLAFEPAVTGGGAPGGGVPARVAGAVPAPGARAAAAVGASAVPAVTA----VT 403

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  686 LYALSPVKEPAKASSRATSSRTPSRTVSPRAASPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGLYTAPVQDSLQPTA 765
Cdd:PRK07003  404 GAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCDERDAQPPADSGSASAPASD 483

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 569002914  766 VSPTYSSDISP--VSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRPEslPTSPPWTPAASRPPSSLDG 830
Cdd:PRK07003  484 APPDAAFEPAPraAAPSAATPAAVPDARAPAAASREDAPAAAAPPA--PEARPPTPAAAAPAARAGG 548
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 614-987 6.29e-05

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 47.09  E-value: 6.29e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  614 SSGHAELARCPSPTMSLPSSWKYTTNAPGGFR--VASLSPARTPPAslyhgylPENGVLRPEPTKQQPYQMRPSLYALSP 691
Cdd:PHA03307   74 GPGTEAPANESRSTPTWSLSTLAPASPAREGSptPPGPSSPDPPPP-------TPPPASPPPSPAPDLSEMLRPVGSPGP 146

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  692 VKEPAKASSRATSSRTPSRTVSPRAASPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGlytAPVQDSLQPTAVSPTYS 771
Cdd:PHA03307  147 PPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRP---PRRSSPISASASSPAPA 223

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  772 SDISPVSPSRA--WSPRAKQAPRPSFSTRNAGIEAQDRPESLPTsPPWTPAASRPPSSLDGWVSPGPWEPGRGSSMSSPP 849
Cdd:PHA03307  224 PGRSAADDAGAssSDSSSSESSGCGWGPENECPLPRPAPITLPT-RIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSS 302

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  850 PLPPPPPMSPSWSERSVSPLRSETEARPPSrqlqallarniiNAARRKSASPRPAPaetlRPFSPPQGPPPPPARMRSPQ 929
Cdd:PHA03307  303 PGSGPAPSSPRASSSSSSSRESSSSSTSSS------------SESSRGAAVSPGPS----PSRSPSPSRPPPPADPSSPR 366

                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 569002914  930 PASPARNFRGAAFSPIPRSPLPIGPSSCASPRSPQAAPSRPFPYRRSPTDSDVSLDSE 987
Cdd:PHA03307  367 KRPRPSRAPSSPAASAGRPTRRRARAAVAGRARRRDATGRFPAGRPRPSPLDAGAASG 424
PHA03247 PHA03247
large tegument protein UL36; Provisional
 176-480 1.78e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.70  E-value: 1.78e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  176 QSSPNPPDTEVPSPAADINQNPSSPNATLTTLASSSHHSQPTADINQNPPAAITPVPQNSSQAQCSPNGTLDSKPGtlca 255
Cdd:PHA03247 2730 QASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPA---- 2805

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  256 dDGQSPVPAeevRSSILLIDKVSAPPSAASTFSREATPLSSSGPPAADLMSSSLLIDMQPSTLVAPAEQEVPghvAVTTP 335
Cdd:PHA03247 2806 -DPPAAVLA---PAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAA---KPAAP 2878

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  336 TKVYSEvhlTLAKPAsvVNRTARPFGIQSPGTSQIEQSPMMGRRQfgEKAWAPPASSMADRSPQPQRHIMSRSPMVERRL 415
Cdd:PHA03247 2879 ARPPVR---RLARPA--VSRSTESFALPPDQPERPPQPQAPPPPQ--PQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAG 2951

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  416 LGQRSPVLERRPLGNFTP--------------PPTYAETLSTAP----VASRVRSPPSYSTLYPSSDPKPSHLKGQVAPA 477
Cdd:PHA03247 2952 AGEPSGAVPQPWLGALVPgrvavprfrvpqpaPSREAPASSTPPltghSLSRVSSWASSLALHEETDPPPVSLKQTLWPP 3031


                  ...
gi 569002914  478 NKT 480
Cdd:PHA03247 3032 DDT 3034
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 673-841 6.23e-04

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 43.91  E-value: 6.23e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  673 EPTKQQPYQMRPSLYALSPVKEPAKASSRATSSRTPSRTVSPRaaSPAKPSSLDLVPNLPRAGLPPSPALPRPSrsspgl 752
Cdd:PTZ00449  568 KPSKIPTLSKKPEFPKDPKHPKDPEEPKKPKRPRSAQRPTRPK--SPKLPELLDIPKSPKRPESPKSPKRPPPP------ 639

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  753 yTAPVQDSLQPTAVSPTYSSdiSPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRPESLPTSPPWTPAASRPPSSLDGWV 832
Cdd:PTZ00449  640 -QRPSSPERPEGPKIIKSPK--PPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTTVVLDESFESILKETLPETPGTPFT 716


                  ....*....
gi 569002914  833 SPGPWEPGR 841
Cdd:PTZ00449  717 TPRPLPPKL 725
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 690-878 6.79e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.82  E-value: 6.79e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  690 SPVKEPAKASSRATSSRTPSRTVSPRAASPAKPSSLDLVPNLPRAGlPPSPALPRPSRSSPGLYTAPVQDSLQPTAVSPT 769
Cdd:PRK07764  603 PASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVA-APEHHPKHVAVPDASDGGDGWPAKAGGAAPAAP 681

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  770 YSSDISPVSPSRAWSPRAKQAPRPSFSTRnagIEAQDRPESLPTSPPWTPAASRPPSSLDGWVSPGPWEPGRGSSMSSPP 849
Cdd:PRK07764  682 PPAPAPAAPAAPAGAAPAQPAPAPAATPP---AGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQP 758

                         170       180
                  ....*....|....*....|....*....
gi 569002914  850 PLPPPPPMSPSWSERSVSPLRSETEARPP 878
Cdd:PRK07764  759 PPPPAPAPAAAPAAAPPPSPPSEEEEMAE 787
dnaA PRK14086
chromosomal replication initiator protein DnaA;
705-842 2.58e-03

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 41.73  E-value: 2.58e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  705 SRTPSRTVSP--RAASPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGLYTAPVQDSLQPTAVSPTYSSDISPVSPSRA 782
Cdd:PRK14086   71 SETLSRELGRpiRIAITVDPSAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPAYQ 150

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 569002914  783 WSPRAKQAPRPSFS-----TRNAGIEAQDRPEslPTSPPWTPAASRPPSSLDGWVSPGPWEPGRG 842
Cdd:PRK14086  151 QRPEPGAWPRAADDygwqqQRLGFPPRAPYAS--PASYAPEQERDREPYDAGRPEYDQRRRDYDH 213
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 672-983 3.14e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 41.70  E-value: 3.14e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  672 PEPTKQQPYQMRPSLYALSPVKEPAKASSRATSSRTPSRTVSPRAASPAKPSSLDLVPNLPRAGLPP-------SPALPR 744
Cdd:PHA03307   61 ACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPpspapdlSEMLRP 140

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  745 PSRSSPGLYTAPVQDSLQPTAV--SPTYSSDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRPeslptSPPWTPAAS 822
Cdd:PHA03307  141 VGSPGPPPAASPPAAGASPAAVasDAASSRQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRP-----PRRSSPISA 215

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  823 RPPSSldgwvSPGPWEPGRGSSMSSPPPLPPPPPMSPSWSERSVSPLRSETEARPPSRQLQAllARNIINAARRKSASPR 902
Cdd:PHA03307  216 SASSP-----APAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEA--SGWNGPSSRPGPASSS 288

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  903 PAPAEtlrpfsPPQGPPPPPARMRSPQPASPARNFRGAAFSPIPRSPLPIGPSSCASPRSPQAAPSRPFPYRRSPTDSDV 982
Cdd:PHA03307  289 SSPRE------RSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPSPSRSPSPSRPPPPADP 362


                  .
gi 569002914  983 S 983
Cdd:PHA03307  363 S 363
PRK11907 PRK11907
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
159-250 5.27e-03

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;


Pssm-ID: 237019 [Multi-domain]  Cd Length: 814  Bit Score: 40.61  E-value: 5.27e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  159 ALLTANGLHLSQSRETQQSSPNPP-----DTEVPSPAADINQNPSSPNATLTtlaSSSHHSQPTADINQNPPAAITPVpQ 233
Cdd:PRK11907   16 ALLTASNPKLAQAEEIVTTTPATSteaeqTTPVESDATEEADNTETPVAATT---AAEAPSSSETAETSDPTSEATDT-T 91

                          90
                  ....*....|....*..
gi 569002914  234 NSSQAQCSPNGTLDSKP 250
Cdd:PRK11907   92 TSEARTVTPAATETSKP 108
PHA03247 PHA03247
large tegument protein UL36; Provisional
 624-906 6.16e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 40.69  E-value: 6.16e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  624 PSPTMSLPSSWKYTTNAPGGFRVASLSPARTPPASLYHGYLPENGVLRPEPTKQQPYQMRPSLYALSPvkePAKASSRAT 703
Cdd:PHA03247 2712 PHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGP---PRRLTRPAV 2788

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  704 SSRTPSRTVSPRAASPAKPssldlvpnlPRAGLPPSPALPRPSRSSPGLytaPVQDSLQPTAVSPTYSSDISPVSPSRAW 783
Cdd:PHA03247 2789 ASLSESRESLPSPWDPADP---------PAAVLAPAAALPPAASPAGPL---PPPTSAQPTAPPPPPGPPPPSLPLGGSV 2856

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  784 SPRAKQAPRPSFSTRNAGIEAQDRPeslPTSPPWTPAASRPPSSL----DGWVSPGPWEPGRGSSMSSPPPLPPPPPMSP 859
Cdd:PHA03247 2857 APGGDVRRRPPSRSPAAKPAAPARP---PVRRLARPAVSRSTESFalppDQPERPPQPQAPPPPQPQPQPPPPPQPQPPP 2933

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 569002914  860 SWSERSVSPLRSETEARP--------PSRQLQALLARNIINAARR--KSASPRPAPA 906
Cdd:PHA03247 2934 PPPPRPQPPLAPTTDPAGagepsgavPQPWLGALVPGRVAVPRFRvpQPAPSREAPA 2990
PHA03247 PHA03247
large tegument protein UL36; Provisional
 90-756 6.64e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 40.69  E-value: 6.64e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914   90 GHAPGP-SVKPTSPSKPGSPKHPSPQSPSRGVAGHIMegYSEEASLLRHLEKVASEE--EEVPLVVYLKENAALltangl 166
Cdd:PHA03247 2493 GAAPDPgGGGPPDPDAPPAPSRLAPAILPDEPVGEPV--HPRMLTWIRGLEELASDDagDPPPPLPPAAPPAAP------ 2564

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  167 hlSQSRETQQSSPNPPDTEVPSPAA--DINQNPSSPNATLTTLASSSHHSQPTAdinqNPPAAITPVPQNSSQaqcSPNG 244
Cdd:PHA03247 2565 --DRSVPPPRPAPRPSEPAVTSRARrpDAPPQSARPRAPVDDRGDPRGPAPPSP----LPPDTHAPDPPPPSP---SPAA 2635

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  245 TLDSKPGTLCADDGQSPVPAEEVRSsILLIDKVSAPPSAASTFSREATPLSSSGPPAADLMSSSLLIDMQPSTLVAPAEQ 324
Cdd:PHA03247 2636 NEPDPHPPPTVPPPERPRDDPAPGR-VSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHA 2714

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  325 EVPGHVAVTTPTKVYSEVHLTLAKPA--SVVNRTARPFGIQSPGTSQIEQSPmmgrrqfgeKAWAPPASSMADRSPQPQR 402
Cdd:PHA03247 2715 LVSATPLPPGPAAARQASPALPAAPAppAVPAGPATPGGPARPARPPTTAGP---------PAPAPPAAPAAGPPRRLTR 2785

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  403 HIMSRSPMVERRLLGQRSPVLERRPLgnftPPPTYAETLSTAPvASRVRSPPSYSTLYPSSDPKPSH----LKGQVAPAN 478
Cdd:PHA03247 2786 PAVASLSESRESLPSPWDPADPPAAV----LAPAAALPPAASP-AGPLPPPTSAQPTAPPPPPGPPPpslpLGGSVAPGG 2860

                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  479 ktgileeSMARRGSRKSMftfVEKPKVTPNPDLLDLVQTAdekrrqrdhgeVGMEEEPFALGAEASNFQQEPIARDRASP 558
Cdd:PHA03247 2861 -------DVRRRPPSRSP---AAKPAAPARPPVRRLARPA-----------VSRSTESFALPPDQPERPPQPQAPPPPQP 2919

                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  559 AAAEEAVPEWASCLKSP-RIQAKPKPKPN-QNLSEASGKGAELYarrqsrmekyviesSGHAELARCPSPTMSLPSswky 636
Cdd:PHA03247 2920 QPQPPPPPQPQPPPPPPpRPQPPLAPTTDpAGAGEPSGAVPQPW--------------LGALVPGRVAVPRFRVPQ---- 2981

                         570       580       590       600       610       620       630       640
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 569002914  637 ttNAPGGFRVASLSPARTPPASLYHGYLPENGVLRPEPTkQQPYQMRPSLYALSPVKEpakassratSSRTPSRTVSPRA 716
Cdd:PHA03247 2982 --PAPSREAPASSTPPLTGHSLSRVSSWASSLALHEETD-PPPVSLKQTLWPPDDTED---------SDADSLFDSDSER 3049

                         650       660       670       680
                  ....*....|....*....|....*....|....*....|
gi 569002914  717 ASPAKPSSLDLVPNLPRAGLPPSPALPRPSRSSPGLYTAP 756
Cdd:PHA03247 3050 SDLEALDPLPPEPHDPFAHEPDPATPEAGARESPSSQFGP 3089
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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