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Conserved domains on  [gi|568908560|ref|XP_006529405|]
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solute carrier family 45 member 3 isoform X1 [Mus musculus]

Protein Classification

SLC45 family MFS transporter( domain architecture ID 13022743)

SLC45 (solute carrier 45) family major facilitator superfamily (MFS) transporter facilitates the transport of sugars such as sucrose, glucose, and maltose into the cell, with the concomitant uptake of protons (symport system)

CATH:  1.20.1250.20
SCOP:  3000310
TCDB:  2.A.1

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
MFS_SLC45_SUC cd17313
Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily ...
18-537 8.39e-123

Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters; This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


:

Pssm-ID: 340871 [Multi-domain]  Cd Length: 421  Bit Score: 367.34  E-value: 8.39e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  18 LLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLGVL 97
Cdd:cd17313    1 LFLLGFGFFGIEFGWALENSYVPPILQTLGLSHALIGFVWTLGPILGLFVQPLVGSLSDRCNSRIGRRRPFILVGAPLAA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  98 LSLFLIPRAGWLAGLLYPDTRPLELALLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHcRQAFSVYAFMISLGGCLGYL 177
Cdd:cd17313   81 LGLILIPNAADIGLALGDGPRTWALVLFVLGIVLLDFAMNVCQGPVRALLPDLVPPEQR-SKANGIINFMGGLGGVLGYL 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 178 LPAIDWDTSVLAPYLGTQEECLFGLLTLIFLICMAATLFVTEEAVLGPPEPAEGLlvsavsrrccpchvglaFRNLGTLF 257
Cdd:cd17313  160 LGAILWDHNWFGFALGGNLKVPFYIGAIILLVCVLVTLFFVKEPPLSPEAGEHSE-----------------NPSLGEVL 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 258 PRLQQLCCRMPRTLRRLFVAELCSWMALMTFTLFYTDFVGEGLYQGvpraepGTEARRHYDEGIRMGSLGLFLQCAISLV 337
Cdd:cd17313  223 KSLLKLLKIMPRSLLRLLLVIFFWWIAFFPFELFFTDYMGEEVYHG------TSAASSHYGAGVRMGAWGLLIFSLAFLI 296
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 338 FSLVMDRLVQKFGTRSVYLASVMTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTLASLYHREKqvflpkyrgd 417
Cdd:cd17313  297 FSLPIGKLGKKIGRKKVYLIGLVLFAVGMALMALVHNVTVALVLFALGGIGWATININPYPLVSDYHSES---------- 366
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 418 aggssgedsqttsflpgpkpgalfpnghvgsgssgilapppalcgasacdvsmrvvvgeppearvvtGRGICLDLAILDS 497
Cdd:cd17313  367 -------------------------------------------------------------------GRGQGTDTGLLNL 379
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|..
gi 568908560 498 AFLLSQVAPSLFMGSI--VQLSHSVTAYMVSAAGLGLVAIYF 537
Cdd:cd17313  380 AISLAQILVSLLAGPIidVKGYGTVFPVAAVASFLSLVGALF 421
 
Name Accession Description Interval E-value
MFS_SLC45_SUC cd17313
Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily ...
18-537 8.39e-123

Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters; This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340871 [Multi-domain]  Cd Length: 421  Bit Score: 367.34  E-value: 8.39e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  18 LLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLGVL 97
Cdd:cd17313    1 LFLLGFGFFGIEFGWALENSYVPPILQTLGLSHALIGFVWTLGPILGLFVQPLVGSLSDRCNSRIGRRRPFILVGAPLAA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  98 LSLFLIPRAGWLAGLLYPDTRPLELALLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHcRQAFSVYAFMISLGGCLGYL 177
Cdd:cd17313   81 LGLILIPNAADIGLALGDGPRTWALVLFVLGIVLLDFAMNVCQGPVRALLPDLVPPEQR-SKANGIINFMGGLGGVLGYL 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 178 LPAIDWDTSVLAPYLGTQEECLFGLLTLIFLICMAATLFVTEEAVLGPPEPAEGLlvsavsrrccpchvglaFRNLGTLF 257
Cdd:cd17313  160 LGAILWDHNWFGFALGGNLKVPFYIGAIILLVCVLVTLFFVKEPPLSPEAGEHSE-----------------NPSLGEVL 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 258 PRLQQLCCRMPRTLRRLFVAELCSWMALMTFTLFYTDFVGEGLYQGvpraepGTEARRHYDEGIRMGSLGLFLQCAISLV 337
Cdd:cd17313  223 KSLLKLLKIMPRSLLRLLLVIFFWWIAFFPFELFFTDYMGEEVYHG------TSAASSHYGAGVRMGAWGLLIFSLAFLI 296
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 338 FSLVMDRLVQKFGTRSVYLASVMTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTLASLYHREKqvflpkyrgd 417
Cdd:cd17313  297 FSLPIGKLGKKIGRKKVYLIGLVLFAVGMALMALVHNVTVALVLFALGGIGWATININPYPLVSDYHSES---------- 366
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 418 aggssgedsqttsflpgpkpgalfpnghvgsgssgilapppalcgasacdvsmrvvvgeppearvvtGRGICLDLAILDS 497
Cdd:cd17313  367 -------------------------------------------------------------------GRGQGTDTGLLNL 379
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|..
gi 568908560 498 AFLLSQVAPSLFMGSI--VQLSHSVTAYMVSAAGLGLVAIYF 537
Cdd:cd17313  380 AISLAQILVSLLAGPIidVKGYGTVFPVAAVASFLSLVGALF 421
GPH_sucrose TIGR01301
GPH family sucrose/H+ symporter; This model represents sucrose/proton symporters, found in ...
18-350 3.44e-26

GPH family sucrose/H+ symporter; This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.


Pssm-ID: 273545 [Multi-domain]  Cd Length: 477  Bit Score: 111.82  E-value: 3.44e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560   18 LLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLGVL 97
Cdd:TIGR01301   6 LLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVA 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560   98 LSLFLIPRAGWLAGL----LYPDTRPLELALLILGVGLLDFCGQVCFTPLEALLSDLF-RDPDHCRQAFSVYAFMISLGG 172
Cdd:TIGR01301  86 FAVILIGFAADIGHLfgdnLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTgGDARRTRIANAYFSFFMAIGN 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  173 CLGYLLPAID-W-------DTSVLAPYLGTQEECLfgLLTLIFLICMAATLFVTEEAVLGPPEPAEGLLVSAVSRRccpc 244
Cdd:TIGR01301 166 VLGYAAGAYSgLykifpftKTEACGVSCANLKSCF--LIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSK---- 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  245 HVGLAFrnLGTLFPRLQQLccrmPRTLRRLFVAELCSWMALMTFTLFYTDFVGEGLYQGVPRAEpgtearRHYDEGIRMG 324
Cdd:TIGR01301 240 HGEEAF--FGELFGAFKYL----PRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQG------AKYDDGVRAG 307
                         330       340
                  ....*....|....*....|....*.
gi 568908560  325 SLGLFLQCAISLVFSLVMDRLVQKFG 350
Cdd:TIGR01301 308 AFGLMLNSVVLGITSIGMEKLCRGWG 333
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
17-399 4.81e-24

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 104.98  E-value: 4.81e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  17 QLLLVNLLTFGLEVCLAAGITYVPPLLLEV-GVEEKFMTMVLGIGPVLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLG 95
Cdd:COG2211   11 EKLAYGLGDLGLNLAFGLLSAYLLYFYTDVlGLSAALVGLILLVARLWDAITDPLIGALSDRTRTRWGRRRPWILIGAIP 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  96 VLLSLFLIPRAGWLAGLLYpdtrpleLALLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHCRQAFSVYAFMISLGGCLG 175
Cdd:COG2211   91 LALSFVLLFTAPDLSPTGK-------LIYALVTYLLLGLAYTLVNIPYSALGAELTPDYEERTRLSSWRFAFAGLGGLLA 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 176 YLLPAIdwdtsvLAPYLGTQEE----CLFGLLTLIFLICMAATLFVTEEAVLgPPEPAEGLLVSavsrrccpchVGLAFR 251
Cdd:COG2211  164 SVLPPP------LVAAFGGDAAlgyrLTALIFAVLGLLAFLLTFFGTKERPV-PEEEKVSLKES----------LKALLK 226
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 252 NlgtlfprlqqlccrmpRTLRRLFVAELCSWMALMT----FTLFYTDFVGEGLyqgvpraepgtearrhydegiRMGSLG 327
Cdd:COG2211  227 N----------------RPFLLLLLAYLLFFLALALvaalLLYYFKYVLGLSA---------------------ALVGLL 269
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568908560 328 LFLQCAISLVFSLVMDRLVQKFGTRSVYLAS--VMTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTL 399
Cdd:COG2211  270 LALYFLAALLGAPLWPRLAKRFGKKKAFIIGllLAALGLLLLFFLGPGNLWLLLVLAALAGIGLGAILVLPWAM 343
MFS_1 pfam07690
Major Facilitator Superfamily;
33-403 2.45e-05

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 46.64  E-value: 2.45e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560   33 AAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRRPFIWALSLGVLLSLFLIPRAGWLagl 112
Cdd:pfam07690  14 LLGPALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSD----RFGRRRVLLIGLLLFALGLLLLLFASSLW--- 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  113 lypdtrplelaLLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHCRqAFSVYAFMISLGGCLGYLLpaidwdTSVLAPYL 192
Cdd:pfam07690  87 -----------LLLVLRVLQGLGAGALFPAALALIADWFPPEERGR-ALGLVSAGFGLGAALGPLL------GGLLASLF 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  193 GTQeeCLFGLLTLIFLICMAATLFVTEEAVLGPPEPAEGLLVSAVSrrccpchvglafrnlgtlfpRLQQLCCRMPRTLR 272
Cdd:pfam07690 149 GWR--AAFLILAILSLLAAVLLLLPRPPPESKRPKPAEEARLSLIV--------------------AWKALLRDPVLWLL 206
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  273 RLFVAELCSWMALMTFTLFYTDFVGEGLYQGvpraepgtearrhydeGIRMGSLGLflqcaISLVFSLVMDRLVQKFGTR 352
Cdd:pfam07690 207 LALLLFGFAFFGLLTYLPLYQEVLGLSALLA----------------GLLLGLGGL-----LGAIGRLLLGRLSDRLGRR 265
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 568908560  353 SVYLASV---MTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTLASLY 403
Cdd:pfam07690 266 RRLLLALlllILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALVSDL 319
 
Name Accession Description Interval E-value
MFS_SLC45_SUC cd17313
Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily ...
18-537 8.39e-123

Solute carrier family 45 and similar sugar transporters of the Major Facilitator Superfamily of transporters; This group includes the solute carrier 45 (SLC45) family as well as plant sucrose transporters (SUCs or SUTs) and similar proteins such as Schizosaccharomyces pombe general alpha-glucoside permease. the SLC45 family is composed of four (A1-A4) vertebrate proteins as well as related insect proteins such as Drosophila sucrose transporter SCRT or Slc45-1. Members of this group transport sucrose and other sugars like maltose into the cell, with the concomitant uptake of protons (symport system). Plant sucrose transporters are crucial to carbon partitioning, playing a key role in phloem loading/unloading. They play a key role in loading and unloading of sucrose into the phloem and as a result, they control sucrose distribution throughout the whole plant and drive the osmotic flow system in the phloem. They also play a role in the exchange of sucrose between beneficial symbionts (mycorrhiza and Rhizobium) as well as pathogens such as nematodes and parasitic fungi. There are nine sucrose transporter genes in Arabidopsis and five in rice. Vertebrate SLC45 family proteins have been implicated in the regulation of glucose homoeostasis in the brain (SLC45A1), with skin and hair pigmentation (SLC45A2), and with prostate cancer and myelination (SLC45A3). Mutations in SLC45A2, also called MATP (membrane-associated transporter protein) or melanoma antigen AIM1, cause oculocutaneous albinism type 4 (OCA4), an autosomal recessive disorder of melanin biosynthesis that results in congenital hypopigmentation of ocular and cutaneous tissues. The SLC45 family and related sugar transporters belong to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340871 [Multi-domain]  Cd Length: 421  Bit Score: 367.34  E-value: 8.39e-123
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  18 LLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLGVL 97
Cdd:cd17313    1 LFLLGFGFFGIEFGWALENSYVPPILQTLGLSHALIGFVWTLGPILGLFVQPLVGSLSDRCNSRIGRRRPFILVGAPLAA 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  98 LSLFLIPRAGWLAGLLYPDTRPLELALLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHcRQAFSVYAFMISLGGCLGYL 177
Cdd:cd17313   81 LGLILIPNAADIGLALGDGPRTWALVLFVLGIVLLDFAMNVCQGPVRALLPDLVPPEQR-SKANGIINFMGGLGGVLGYL 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 178 LPAIDWDTSVLAPYLGTQEECLFGLLTLIFLICMAATLFVTEEAVLGPPEPAEGLlvsavsrrccpchvglaFRNLGTLF 257
Cdd:cd17313  160 LGAILWDHNWFGFALGGNLKVPFYIGAIILLVCVLVTLFFVKEPPLSPEAGEHSE-----------------NPSLGEVL 222
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 258 PRLQQLCCRMPRTLRRLFVAELCSWMALMTFTLFYTDFVGEGLYQGvpraepGTEARRHYDEGIRMGSLGLFLQCAISLV 337
Cdd:cd17313  223 KSLLKLLKIMPRSLLRLLLVIFFWWIAFFPFELFFTDYMGEEVYHG------TSAASSHYGAGVRMGAWGLLIFSLAFLI 296
                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 338 FSLVMDRLVQKFGTRSVYLASVMTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTLASLYHREKqvflpkyrgd 417
Cdd:cd17313  297 FSLPIGKLGKKIGRKKVYLIGLVLFAVGMALMALVHNVTVALVLFALGGIGWATININPYPLVSDYHSES---------- 366
                        410       420       430       440       450       460       470       480
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 418 aggssgedsqttsflpgpkpgalfpnghvgsgssgilapppalcgasacdvsmrvvvgeppearvvtGRGICLDLAILDS 497
Cdd:cd17313  367 -------------------------------------------------------------------GRGQGTDTGLLNL 379
                        490       500       510       520
                 ....*....|....*....|....*....|....*....|..
gi 568908560 498 AFLLSQVAPSLFMGSI--VQLSHSVTAYMVSAAGLGLVAIYF 537
Cdd:cd17313  380 AISLAQILVSLLAGPIidVKGYGTVFPVAAVASFLSLVGALF 421
GPH_sucrose TIGR01301
GPH family sucrose/H+ symporter; This model represents sucrose/proton symporters, found in ...
18-350 3.44e-26

GPH family sucrose/H+ symporter; This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.


Pssm-ID: 273545 [Multi-domain]  Cd Length: 477  Bit Score: 111.82  E-value: 3.44e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560   18 LLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLGVL 97
Cdd:TIGR01301   6 LLRVASVAAGVQFGWALQLSLLTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVA 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560   98 LSLFLIPRAGWLAGL----LYPDTRPLELALLILGVGLLDFCGQVCFTPLEALLSDLF-RDPDHCRQAFSVYAFMISLGG 172
Cdd:TIGR01301  86 FAVILIGFAADIGHLfgdnLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTgGDARRTRIANAYFSFFMAIGN 165
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  173 CLGYLLPAID-W-------DTSVLAPYLGTQEECLfgLLTLIFLICMAATLFVTEEAVLGPPEPAEGLLVSAVSRRccpc 244
Cdd:TIGR01301 166 VLGYAAGAYSgLykifpftKTEACGVSCANLKSCF--LIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSK---- 239
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  245 HVGLAFrnLGTLFPRLQQLccrmPRTLRRLFVAELCSWMALMTFTLFYTDFVGEGLYQGVPRAEpgtearRHYDEGIRMG 324
Cdd:TIGR01301 240 HGEEAF--FGELFGAFKYL----PRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQG------AKYDDGVRAG 307
                         330       340
                  ....*....|....*....|....*.
gi 568908560  325 SLGLFLQCAISLVFSLVMDRLVQKFG 350
Cdd:TIGR01301 308 AFGLMLNSVVLGITSIGMEKLCRGWG 333
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
17-399 4.81e-24

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 104.98  E-value: 4.81e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  17 QLLLVNLLTFGLEVCLAAGITYVPPLLLEV-GVEEKFMTMVLGIGPVLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLG 95
Cdd:COG2211   11 EKLAYGLGDLGLNLAFGLLSAYLLYFYTDVlGLSAALVGLILLVARLWDAITDPLIGALSDRTRTRWGRRRPWILIGAIP 90
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  96 VLLSLFLIPRAGWLAGLLYpdtrpleLALLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHCRQAFSVYAFMISLGGCLG 175
Cdd:COG2211   91 LALSFVLLFTAPDLSPTGK-------LIYALVTYLLLGLAYTLVNIPYSALGAELTPDYEERTRLSSWRFAFAGLGGLLA 163
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 176 YLLPAIdwdtsvLAPYLGTQEE----CLFGLLTLIFLICMAATLFVTEEAVLgPPEPAEGLLVSavsrrccpchVGLAFR 251
Cdd:COG2211  164 SVLPPP------LVAAFGGDAAlgyrLTALIFAVLGLLAFLLTFFGTKERPV-PEEEKVSLKES----------LKALLK 226
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 252 NlgtlfprlqqlccrmpRTLRRLFVAELCSWMALMT----FTLFYTDFVGEGLyqgvpraepgtearrhydegiRMGSLG 327
Cdd:COG2211  227 N----------------RPFLLLLLAYLLFFLALALvaalLLYYFKYVLGLSA---------------------ALVGLL 269
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568908560 328 LFLQCAISLVFSLVMDRLVQKFGTRSVYLAS--VMTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTL 399
Cdd:COG2211  270 LALYFLAALLGAPLWPRLAKRFGKKKAFIIGllLAALGLLLLFFLGPGNLWLLLVLAALAGIGLGAILVLPWAM 343
AraJ COG2814
Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];
8-401 6.27e-10

Predicted arabinose efflux permease AraJ, MFS family [Carbohydrate transport and metabolism];


Pssm-ID: 442063 [Multi-domain]  Cd Length: 348  Bit Score: 60.76  E-value: 6.27e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560   8 SRLLRHRKAQLLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRRP 87
Cdd:COG2814    2 PATPRRRWLALLALALGAFLSGLGIGIVLPALPLIAADLGASPAQAGLVVTAYLLGAALGAPLAGRLAD----RFGRRRV 77
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  88 FIWALSLGVLLSLfliprAGWLAGllypdtrplELALLILGVGLLDFCGQVCFTPLEALLSDLFrDPDHCRQAFSVYAFM 167
Cdd:COG2814   78 LLLGLLLFALGSL-----LCALAP---------SLWLLLAARFLQGLGAGALFPAALALIADLV-PPERRGRALGLLGAG 142
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 168 ISLGGCLGYLLpaidwdTSVLAPYLGTQEecLFGLLTLIFLICMAATLFVTEEAVLGPPEPAEGLLVSAVSRRccpchvg 247
Cdd:COG2814  143 LGLGPALGPLL------GGLLADLFGWRW--VFLVNAVLALLALLLLLRLLPESRPAARARLRGSLRELLRRP------- 207
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 248 lafrnlgtlfprlqqlccrmprTLRRLFVAELCSWMALMTFTLFYTDFvgeglyqgvpraepgteARRHYDEGIRMGSLG 327
Cdd:COG2814  208 ----------------------RLLLLLLLAFLLGFGFFALFTYLPLY-----------------LQEVLGLSASAAGLL 248
                        330       340       350       360       370       380       390
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568908560 328 LFLQCAISLVFSLVMDRLVQKFGTRSVYLASVMTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTLAS 401
Cdd:COG2814  249 LALFGLGGVLGALLAGRLADRFGRRRLLLIGLLLLALGLLLLALAGSLWLLLLALFLLGFGFGLLFPLLQALVA 322
MFS cd06174
Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse ...
37-408 9.70e-08

Major Facilitator Superfamily; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3-phosphate transporter), LacY (lactose permease), and EmrD (multidrug transporter), MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement. Bacterial members function primarily for nutrient uptake, and as drug-efflux pumps to confer antibiotic resistance. Some MFS proteins have medical significance in humans such as the glucose transporter Glut4, which is impaired in type II diabetes, and glucose-6-phosphate transporter (G6PT), which causes glycogen storage disease when mutated.


Pssm-ID: 349949 [Multi-domain]  Cd Length: 378  Bit Score: 54.35  E-value: 9.70e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  37 TYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRRPFIWALSLGVLLSLFLipragWLAGLLYpd 116
Cdd:cd06174   17 PLLPALLQSFGLSASQLGLLFALFSLGYALLQPLAGLLAD----RFGRRPVLLLGLLLFALGALLF-----AFAPSFW-- 85
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 117 trplelaLLILGVGLLDFCGQVCFTPLEALLSDLFrDPDHCRQAFSVYAFMISLGGCLGYLLpaidwdTSVLAPYLGTQE 196
Cdd:cd06174   86 -------LLLLGRFLLGLGSGLIDPAVLALIADLF-PERERGRALGLLQAFGSVGGILGPLL------GGILASSLGFGW 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 197 ECLFGLLTLIFLICMAATLFVTEEAVLGPPEPAEGLLVSAVSRrccpcHVGLAFRNLGTLFprlqqlccrmprtlrrLFV 276
Cdd:cd06174  152 RAVFLIAAALALLAAILLLLVVPDPPESARAKNEEASSKSVLK-----LLKRVLKNPGLWL----------------LLL 210
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 277 AELCSWMALMTFTLFYTDFVGEGLYQGVpraepgtearrhyDEGIRMGSLGLFLQCAISLVFSLVMDRlvqKFGTRSVYL 356
Cdd:cd06174  211 AIFLVNLAYYSFSTLLPLFLLDLGGLSV-------------AVAGLLLSLFGLAGALGSLLLGLLSDR---LIGRKPLLL 274
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|..
gi 568908560 357 ASVMTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTLASLYHREKQ 408
Cdd:cd06174  275 IGLLLMALGLALLLLAPSLLLLLLLLLLLGFGLGGLLPLSFALIAELFPPEI 326
MFS_MelB_like cd17332
Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major ...
51-396 1.66e-06

Salmonella enterica Na+/melibiose symporter MelB and similar transporters of the Major Facilitator Superfamily; This family is composed of Salmonella enterica Na+/melibiose symporter MelB, Major Facilitator Superfamily domain-containing proteins, MFSD2 and MFSD12, and other sugar transporters. MelB catalyzes the electrogenic symport of galactosides with Na+, Li+ or H+. The MFSD2 subfamily is composed of two vertebrate members, MFSD2A and MFSD2B. MFSD2A is more commonly called sodium-dependent lysophosphatidylcholine symporter 1 (NLS1). It is an LPC symporter that plays an essential role for blood-brain barrier formation and function. Inactivating mutations in MFSD2A cause a lethal microcephaly syndrome. MFSD2B is a potential risk or protect factor in the prognosis of lung adenocarcinoma. MelB-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340890 [Multi-domain]  Cd Length: 424  Bit Score: 50.68  E-value: 1.66e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  51 KFMTMVLGIGP-----------VLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLGVLLSLFLI---PRAGWLAGLLYpd 116
Cdd:cd17332   24 FFYTDVLGLSAaaagtiflvarIIDAINDPLMGYLIDRTRSRWGRFRPWLLWGAIPLALLFVLLfttPDGSGTGKLIY-- 101
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 117 trplelaLLILGVgLLDFCGQVCFTPLEALLSDLFRDPDHCRQAFSVYAFMISLGGCLGYLLPAIdwdtsvLAPYLGTQE 196
Cdd:cd17332  102 -------ALITYI-LLDLLYTLVNIPYTALIPELTDDPEERTSLTSWRMFFATIGGLLVTVLPPP------LVAYFGGGN 167
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 197 ECL-----FGLLTLIFLICMAATLFVTEEAVLGPPEPAEGLLVSAVSRRCcpchvglaFRNlgtlfprlqqlccrmpRTL 271
Cdd:cd17332  168 ASRgyfltALIIGIIGIILLLICFFGTRERVVPPEEEKSKLPLLKSLKAL--------LKN----------------RPF 223
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 272 RRLFVAELCSWMALM---TFTLFYTDFVgeglyqgvpraepgtearrHYDEGIRMGSLGLFLqcAISLVFSLVMDRLVQK 348
Cdd:cd17332  224 LILLLAYLLYFLAFNivnTVLVYYFKYV-------------------LGGRAELVLLLLLIL--SGALLALLPWPPLKKR 282
                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|
gi 568908560 349 FGTRSVYLASVMTFPVAAAATCL--SHSVVVVTASAALTGFTFSALQILP 396
Cdd:cd17332  283 FGKKKAFFIGLLLAILGLLLLFFlpPGNLVLILVLAVLAGIGYGGANLLP 332
MFS_MdtG_SLC18_like cd17325
bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator ...
1-216 1.95e-05

bacterial MdtG-like and eukaryotic solute carrier 18 (SLC18) family of the Major Facilitator Superfamily of transporters; This family is composed of eukaryotic solute carrier 18 (SLC18) family transporters and related bacterial multidrug resistance (MDR) transporters including several proteins from Escherichia coli such as multidrug resistance protein MdtG, from Bacillus subtilis such as multidrug resistance proteins 1 (Bmr1) and 2 (Bmr2), and from Staphylococcus aureus such as quinolone resistance protein NorA. The family also includes Escherichia coli arabinose efflux transporters YfcJ and YhhS. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The SLC18 transporter family includes vesicular monoamine transporters (VAT1 and VAT2), vesicular acetylcholine transporter (VAChT), and SLC18B1, which is proposed to be a vesicular polyamine transporter (VPAT). The MdtG/SLC18 family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340883 [Multi-domain]  Cd Length: 375  Bit Score: 47.19  E-value: 1.95e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560   1 MIQRLWASRLLRHRKAQLLLVNLLTFGLEVCLAAGITYVPPLLLEV-GVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwr 79
Cdd:cd17325  184 SAARLRSGLRLLLRDRRLLALFLAIFVLAFAFGALEPFLPLYAAELgGLSPAQIGLLFGAQGLASALSQPPAGKLSD--- 260
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  80 gRYGRRRPFIWALSLGVlLSLFLIPRAGWLAGLLypdtrpleLALLILGVGLldfcgQVCFTPLEALLSDLFrDPDHCRQ 159
Cdd:cd17325  261 -RIGRKPLILIGLLLSA-VALLLLPLATSFWLLL--------LLLALLGLGL-----GLVFPATLALLADIV-PPEGRGT 324
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 568908560 160 AFSVYAFMISLGGCLGYLLpaidwdTSVLAPYLGTQEecLFGLLTLIFLICMAATLF 216
Cdd:cd17325  325 AMGLFNTAFSLGMVLGPLL------GGFLYDAFGFAT--PFLAAAALLLLAAVLFLL 373
MFS_1 pfam07690
Major Facilitator Superfamily;
33-403 2.45e-05

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 46.64  E-value: 2.45e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560   33 AAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRRPFIWALSLGVLLSLFLIPRAGWLagl 112
Cdd:pfam07690  14 LLGPALPLLLAEDLGISPTEIGLLLTLFSLGYALAQPLAGRLSD----RFGRRRVLLIGLLLFALGLLLLLFASSLW--- 86
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  113 lypdtrplelaLLILGVGLLDFCGQVCFTPLEALLSDLFRDPDHCRqAFSVYAFMISLGGCLGYLLpaidwdTSVLAPYL 192
Cdd:pfam07690  87 -----------LLLVLRVLQGLGAGALFPAALALIADWFPPEERGR-ALGLVSAGFGLGAALGPLL------GGLLASLF 148
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  193 GTQeeCLFGLLTLIFLICMAATLFVTEEAVLGPPEPAEGLLVSAVSrrccpchvglafrnlgtlfpRLQQLCCRMPRTLR 272
Cdd:pfam07690 149 GWR--AAFLILAILSLLAAVLLLLPRPPPESKRPKPAEEARLSLIV--------------------AWKALLRDPVLWLL 206
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  273 RLFVAELCSWMALMTFTLFYTDFVGEGLYQGvpraepgtearrhydeGIRMGSLGLflqcaISLVFSLVMDRLVQKFGTR 352
Cdd:pfam07690 207 LALLLFGFAFFGLLTYLPLYQEVLGLSALLA----------------GLLLGLGGL-----LGAIGRLLLGRLSDRLGRR 265
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....
gi 568908560  353 SVYLASV---MTFPVAAAATCLSHSVVVVTASAALTGFTFSALQILPYTLASLY 403
Cdd:pfam07690 266 RRLLLALlllILAALGLLLLSLTLSSLWLLLALLLLGFGFGLVFPALNALVSDL 319
MelB COG2211
Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];
1-215 5.17e-05

Na+/melibiose symporter or related transporter [Carbohydrate transport and metabolism];


Pssm-ID: 441813 [Multi-domain]  Cd Length: 447  Bit Score: 45.66  E-value: 5.17e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560   1 MIQRLWASRLLRhrkaQLLLVNLLTFGLEVCLAAGITYVppLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrg 80
Cdd:COG2211  220 SLKALLKNRPFL----LLLLAYLLFFLALALVAALLLYY--FKYVLGLSAALVGLLLALYFLAALLGAPLWPRLAK---- 289
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  81 RYGRRRPFIWALSLGVLLSLFLipragWLAGllypdtrPLELALLILGVGLLDFCGQVCFTPLEALLSDLFrDPDHCRQ- 159
Cdd:COG2211  290 RFGKKKAFIIGLLLAALGLLLL-----FFLG-------PGNLWLLLVLAALAGIGLGAILVLPWAMLADVV-DYDEWKTg 356
                        170       180       190       200       210       220
                 ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568908560 160 ------AFSVYAFMISLGGCLGYLLPAIDWDTSVLAPYLGTQEECLFGLLTLIFLICMAATL 215
Cdd:COG2211  357 rrreglYFGIFTFAIKLGQALAGALAGLLLALFGYVAGAAQSPSALTGIRLLFFLLPAVLLL 418
MFS_1 pfam07690
Major Facilitator Superfamily;
9-175 1.01e-04

Major Facilitator Superfamily;


Pssm-ID: 429598 [Multi-domain]  Cd Length: 344  Bit Score: 44.72  E-value: 1.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560    9 RLLRHRKAQLLLVNLLTFGLevCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRRPF 88
Cdd:pfam07690 195 KALLRDPVLWLLLALLLFGF--AFFGLLTYLPLYQEVLGLSALLAGLLLGLGGLLGAIGRLLLGRLSD----RLGRRRRL 268
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560   89 IWALSLGVLLSLFLIPRAGWLAGLLypdtrpLELALLILGVGLLdfcgqVCFTPLEALLSDLFRdPDHCRQAFSVYAFMI 168
Cdd:pfam07690 269 LLALLLLILAALGLLLLSLTLSSLW------LLLALLLLGFGFG-----LVFPALNALVSDLAP-KEERGTASGLYNTAG 336

                  ....*..
gi 568908560  169 SLGGCLG 175
Cdd:pfam07690 337 SLGGALG 343
MFS_2 pfam13347
MFS/sugar transport protein; This family is part of the major facilitator superfamily of ...
37-231 1.29e-04

MFS/sugar transport protein; This family is part of the major facilitator superfamily of membrane transport proteins.


Pssm-ID: 433134 [Multi-domain]  Cd Length: 427  Bit Score: 44.61  E-value: 1.29e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560   37 TYVPPLLLEV-GVEEKFMTMVLGIGPVLGLVSVPLLGSASDQWRGRYGRRRPFIWALSLGVLLSLFLIpragWLAGLLYP 115
Cdd:pfam13347  18 TYLLYFYTDVlGLSAAAVGLVLLVARLVDAFTDPIVGHIIDRTRTRWGRRRPWLLLSAIILAVSFILL----FTPPELGR 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  116 DTRPLELALLILGVGLLDFCGQVCFTpleALLSDLFRDPDHcRQAFSVYAFMIS-LGGCLGYLLPAIdwdtsVLAPYLGT 194
Cdd:pfam13347  94 APLFIWLLATYILLRIAYTFFEIPYW---SLGPELTRDYDE-RTSLTSYRSFFSvGGGLLAAALAFP-----LVLILGGT 164
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 568908560  195 QEEC----LFGLL-TLIFLICMAATLFVTEEAVLGPPEPAEG 231
Cdd:pfam13347 165 GLERkgyrIFALIgAVLMLLGVIITAAGTKERVSMRSKEDTG 206
BtlA COG2270
MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction ...
54-401 1.51e-04

MFS-type transporter involved in bile tolerance, Atg22 family [General function prediction only];


Pssm-ID: 441871 [Multi-domain]  Cd Length: 424  Bit Score: 44.37  E-value: 1.51e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  54 TMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRRPFIWALSLGVLLSlflipragwLAGLLYPDTRPLELALLILGVGLLD 133
Cdd:COG2270   55 GYALAIAGLLVALLAPVLGAIAD----RSGRKKPFLAFFTLLGVLA---------TAALFFVAPGGLWLGLLLFVLANIG 121
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 134 FCGQVCFTplEALLSDLFRDPDHCRqafsVYAFMISLGGCLGYLLPAIDWDTSVLAPYLGTQEECLF----GLLT-LIFL 208
Cdd:COG2270  122 FEGSLVFY--NAFLPDIATPEEIGR----VSGLGWALGYLGGVLLLLINLALFLKPEAFGLPDAGEAvrisFLLTaLWWL 195
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 209 ICMAATLFVTEEAVLGPPEPAEGLLVSavsrrccpchvglAFRNLGTLFPRLqqlccRMPRTLRRLFVAELCSWMALMTF 288
Cdd:COG2270  196 LFALPLFLFLPERPRPGPAPPRGAVRA-------------GFRELRRTLREL-----RRYRDLLRFLLAYFFYRDGVQTV 257
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560 289 TLFYTDFVGEGLyqgvpraepgtearrhydeGIRMGSLGLFLqCAISLV---FSLVMDRLVQKFGTRSVYLASVMTFPVA 365
Cdd:COG2270  258 IAFAGIYAAGVL-------------------GFSTTELIVFG-LLVQIVaalGALLFGRLDDRIGPKRVILVSLVIWIVV 317
                        330       340       350
                 ....*....|....*....|....*....|....*.
gi 568908560 366 AAATCLSHSVVVVTASAALTGFTFSALQILPYTLAS 401
Cdd:COG2270  318 CLAAYFLTTALAFWILGLLIGLVMGGIQALSRSLLA 353
MFS_NepI_like cd17324
Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator ...
9-212 3.49e-04

Purine ribonucleoside efflux pump NepI and similar transporters of the Major Facilitator Superfamily; This family is composed of purine efflux pumps such as Escherichia coli NepI and Bacillus subtilis PbuE, sugar efflux transporters such as Corynebacterium glutamicum arabinose efflux permease, multidrug resistance (MDR) transporters such as Streptomyces lividans chloramphenicol resistance protein (CmlR), and similar proteins. NepI and PbuE are involved in the efflux of purine ribonucleosides such as guanosine, adenosine and inosine, as well as purine bases like guanine, adenine, and hypoxanthine, and purine base analogs. They play a role in the maintenance of cellular purine base pools, as well as in protecting the cells and conferring resistance against toxic purine base analogs such as 6-mercaptopurine. MDR transporters are drug/H+ antiporters (DHA) that mediate the efflux of a variety of drugs and toxic compounds, and confer resistance to these compounds. The NepI-like family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340882 [Multi-domain]  Cd Length: 370  Bit Score: 42.92  E-value: 3.49e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560   9 RLLRHRKAQLLLvnLLTFGLEVCLAAGITYVPPLLLEV-GVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRRP 87
Cdd:cd17324  193 LLLRNPRLRLAY--LITFLLFGGFFALYTYLAPFLTDVpGFSSSAIIGLLLLFGVAGVVGSPLAGRLAD----RGGRRAL 266
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  88 FIWALSLGVLLSLFLIPRAGWLAgllypdtrplelalLILGVGLLDFCGQVCFTPLEALLSDLfrDPDHCRQAFSVYAFM 167
Cdd:cd17324  267 LIALLLLAAALLLLTLLGPSPLL--------------LLVGLVLWGLGFFAAHSALQTRVLRL--APEARGLASSLYLAA 330
                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*
gi 568908560 168 ISLGGCLGYLLPAIDWDTSVLAPYLgtqeeCLFGLLTLIFLICMA 212
Cdd:cd17324  331 YNLGGALGAALGGLVLDHGGWAGVG-----WVGAALLLLALLLAL 370
MFS_ShiA_like cd17369
Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This ...
4-151 1.08e-03

Shikimate transporter and similar proteins of the Major Facilitator Superfamily; This subfamily is composed of Escherichia coli shikimate transporter (ShiA), inner membrane metabolite transport protein YhjE, and other putative metabolite transporters. ShiA is involved in the uptake of shikimate, an aromatic compound involved in siderophore biosynthesis. It has been suggested that YhjE may mediate the uptake of osmoprotectants. The ShiA-like subfamily belongs to the Metazoan Synaptic Vesicle Glycoprotein 2 (SV2) and related small molecule transporter family (SV2-like) of the Major Facilitator Superfamily (MFS) of membrane transport proteins. MFS proteins are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 340927 [Multi-domain]  Cd Length: 408  Bit Score: 41.74  E-value: 1.08e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560   4 RLWASRLLRHRKAQLLLVNLLTFGLEVCLAAGITYVPPLLLEV-GVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRY 82
Cdd:cd17369  216 RAPLVEVLRRHWRALLLAIGLRLAENVLFYLFTTFALSYATQTlGVDRSTVLLAVLIASVVAAITIPLFGWLSD----RV 291
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568908560  83 GRRRPFIWALSLGVLLSLFLIP----RAGWLAGLLYpdtrpleLALLILGVGLLdfcgqvcFTPLEALLSDLF 151
Cdd:cd17369  292 GRRPVYLAGALLAALFAFPFFWlldtGSTWLIVLAA-------VVVLGVLHGMM-------YGPQAAFLAELF 350
NarK COG2223
Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];
9-217 1.49e-03

Nitrate/nitrite transporter NarK [Inorganic ion transport and metabolism];


Pssm-ID: 441825 [Multi-domain]  Cd Length: 392  Bit Score: 41.02  E-value: 1.49e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560   9 RLLRHRKAQLL-LVNLLTFGLEVCLAAgitYVPPLLLEV-GVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRR 86
Cdd:COG2223  200 EALRDPRFWLLsLLYFGTFGSFIGFSS---WLPPYLVDQfGLSAATAGLLAALFALLGALGRPLGGWLSD----RIGGRR 272
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  87 PFIWALSLGVLLSLFLIpragwlagllypdTRPLELALLILGVGLLDFCGQVCFTPLEALLSDLFRDpdhcRQAFSVYAF 166
Cdd:COG2223  273 VLLIVFALMALGLLLLA-------------LALGSLWLFLVLFLLLGLALGGGNGAVFALVPDIFPT----KNAGAVYGL 335
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|.
gi 568908560 167 MISLGGCLGYLLPAIdwdTSVLAPYLGTQEEClFGLLTLIFLICMAATLFV 217
Cdd:COG2223  336 VGAAGGLGGFLGPLL---FGALLDATGSYTAA-FLVFAVLALVALVLTLLL 382
UhpC COG2271
Sugar phosphate permease [Carbohydrate transport and metabolism];
16-221 1.54e-03

Sugar phosphate permease [Carbohydrate transport and metabolism];


Pssm-ID: 441872 [Multi-domain]  Cd Length: 363  Bit Score: 41.01  E-value: 1.54e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  16 AQLLLVNLLTFGLEVCLAAGITYVPPLLLEV-GVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRRpfIWALSL 94
Cdd:COG2271  180 LRFWLLALAYFLVYFALYGFLTWLPTYLVEVrGLSLAQAGLLLSLPFLAGIVGSLLGGWLSD----RLGRRR--KLVLAI 253
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560  95 GVLLSLfliprAGWLAGLLYPDtrpleLALLILGVGLLDFCGQVCFTPLEALLSDLFrdPDHCR-QAFSVYAFMISLGGC 173
Cdd:COG2271  254 GLLLAA-----LALLLLALLPS-----PALAIALLFLAGFGLGGAFGLLWALAAELF--PKKARgTASGLVNTFGFLGGA 321
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|...
gi 568908560 174 L-----GYLLPAIDWDTSvlapylgtqeeclFGLLTLIFLICMAATLFVTEEA 221
Cdd:COG2271  322 LgpllvGYLLDATGYQAA-------------FLLLAALALLAALLALLLLRET 361
MFS_FsR cd17478
Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; ...
7-114 4.74e-03

Fosmidomycin resistance protein of the Major Facilitator Superfamily of transporters; Fosmidomycin resistance protein (FsR) confers resistance against fosmidomycin. It shows sequence similarity with the bacterial drug-export proteins that mediate resistance to tetracycline and chloramphenicol. This FsR family belongs to the Major Facilitator Superfamily (MFS) of membrane transport proteins, which are thought to function through a single substrate binding site, alternating-access mechanism involving a rocker-switch type of movement.


Pssm-ID: 341031 [Multi-domain]  Cd Length: 365  Bit Score: 39.46  E-value: 4.74e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568908560   7 ASRLLRHRKAQLLLVNLLTFGLEVCLAAGITYVPPLLLEVGVEEKFMTMVLGIGPVLGLVSVPLLGSASDqwrgRYGRRR 86
Cdd:cd17478  186 ARSTLKGVWRALLLLLIIVFLRSWVLSSLTTFLPFYLVQRGYSLVFAGLLLSLFLFAGAIGTLIGGPLSD----RFGRRR 261
                         90       100
                 ....*....|....*....|....*...
gi 568908560  87 PFIWALSLGVLLSLFLIPRAGWLAGLLY 114
Cdd:cd17478  262 VIIASLLLAAPFLLLFLLTPGIWSYILL 289
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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