|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1605-1862 |
2.47e-71 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 239.48 E-value: 2.47e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1605 SPPFEYTIMAMIALNTIVLMMKFYGAS-VAYENALRVFNIVFTSLFSLECVLKVMAFGI-LNYFRDAWNIFDFVTVLGSI 1682
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPeEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1683 TDILVTEFGNnFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDGE 1762
Cdd:pfam00520 81 ISLVLSSVGS-LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1763 DedsdedefQITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKpcdknsgiltadcGNEFAYFYFVSFIFLCSFLM 1842
Cdd:pfam00520 160 N--------PDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK-------------GEFWAYIYFVSFIILGGFLL 218
|
250 260
....*....|....*....|
gi 568955985 1843 LNLFVAVIMDNFEYLTRDSS 1862
Cdd:pfam00520 219 LNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
188-462 |
6.00e-68 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 229.46 E-value: 6.00e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 188 WPPFEYMILATIIANCIVLALEQHLPDDDKTPmsERLDDTEPYFIGIFCFEAGIKIVALGFAFHkgsYLRNGWNVMDFVV 267
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT--TVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 268 VLTGILATVGTE----FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKF 343
Cdd:pfam00520 76 VLPSLISLVLSSvgslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 344 HTtcfeegtddiqgespapcgteepartcpngtkcqpyWEGPNNGITQFDNILFAVLTVFQCITMEGWTDLLYNSNDASG 423
Cdd:pfam00520 156 KT------------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG 199
|
250 260 270
....*....|....*....|....*....|....*....
gi 568955985 424 NTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 462
Cdd:pfam00520 200 EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
578-816 |
6.79e-57 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 197.87 E-value: 6.79e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 578 QAFYWTVLSLVALNTLCVAIVHYNQPEW-LSDFLYYAEFIFLGLFMSEMFIKMYGLG-TRPYFHSSFNCFDCGVIIGSIF 655
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGfKKRYFRSPWNILDFVVVLPSLI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 656 EVIWAVIKPGtsFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDE 735
Cdd:pfam00520 82 SLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 736 G--TPPTNFDTFPAAIMTVFQILTGEDWNEVMYDGIKSqggvQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE 813
Cdd:pfam00520 160 NpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDG----KGEFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTE 235
|
...
gi 568955985 814 LTK 816
Cdd:pfam00520 236 RTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1284-1515 |
2.57e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
:
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 196.33 E-value: 2.57e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1284 RYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHqgaYFRDLWNILDFIVVSG 1363
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1364 ALVAFAFTGNSKGKDINtikSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGKF 1443
Cdd:pfam00520 79 SLISLVLSSVGSLSGLR---VLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568955985 1444 fhctdeskeferdcrgkyllyeKNEVKARDREWkkyefHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFE 1515
Cdd:pfam00520 156 ----------------------KTWENPDNGRT-----NFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1934-2011 |
8.33e-35 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
:
Pssm-ID: 462591 Cd Length: 77 Bit Score: 128.48 E-value: 8.33e-35
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568955985 1934 NSTLMALIRTALDIKIAKGGaDKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKA 2011
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1871-1924 |
8.62e-30 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
:
Pssm-ID: 465306 Cd Length: 54 Bit Score: 113.13 E-value: 8.62e-30
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 568955985 1871 EYVRVWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKKCPHRVACKRLLRMDLP 1924
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| PHA03307 super family |
cl33723 |
transcriptional regulator ICP4; Provisional |
2039-2453 |
1.88e-10 |
|
transcriptional regulator ICP4; Provisional
The actual alignment was detected with superfamily member PHA03307:
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 66.73 E-value: 1.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2039 EGGPSQNALPSTQLDPGGGLMAHEGGMKESPSWVtqrAQEMFQKTGTWSPERGPPIDMPNSQPNSQSVEMREMGTDGYSd 2118
Cdd:PHA03307 16 EGGEFFPRPPATPGDAADDLLSGSQGQLVSDSAE---LAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWS- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2119 sehylpmEGQTRAASMPRLPAENQRRRGRPRGNDlSTISDTSPMKRSASVLGPKARRldDYSLERVPPEENQRYH-QRRR 2197
Cdd:PHA03307 92 -------LSTLAPASPAREGSPTPPGPSSPDPPP-PTPPPASPPPSPAPDLSEMLRP--VGSPGPPPAASPPAAGaSPAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2198 DRGHRTSERSLGRYTDVDtglgtdlSMTTQSGDLPSKDR--DQDRGRPKDRkhrphhhhHHHHHHPPAPDRDRYAQERPD 2275
Cdd:PHA03307 162 VASDAASSRQAALPLSSP-------EETARAPSSPPAEPppSTPPAAASPR--------PPRRSSPISASASSPAPAPGR 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2276 TGRARAREQRWSRSPSEGREhtthrQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPaarrmAGP 2355
Cdd:PHA03307 227 SAADDAGASSSDSSSSESSG-----CGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRE-----RSP 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2356 AAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPRE-----PPGGAHDPAPRSPRTPRAAGCASPR---HGRRLPN 2427
Cdd:PHA03307 297 SPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSrgaavSPGPSPSRSPSPSRPPPPADPSSPRkrpRPSRAPS 376
|
410 420
....*....|....*....|....*.
gi 568955985 2428 GYYAGHGAPRPRTARRGAHDAYSESE 2453
Cdd:PHA03307 377 SPAASAGRPTRRRARAAVAGRARRRD 402
|
|
| PHA03247 super family |
cl33720 |
large tegument protein UL36; Provisional |
894-1276 |
4.94e-05 |
|
large tegument protein UL36; Provisional
The actual alignment was detected with superfamily member PHA03247:
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 4.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 894 PTPYARPLRPDVKTHLDRPlVVDPQENR-------NNNTNKSRAPEALRP-TARPRESARDPDARRAWPGSPERAPGREG 965
Cdd:PHA03247 2571 PRPAPRPSEPAVTSRARRP-DAPPQSARprapvddRGDPRGPAPPSPLPPdTHAPDPPPPSPSPAANEPDPHPPPTVPPP 2649
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 966 PYGRESEPQQREHAPPREHAPWDAdterAKAGDAPRRHTHR---------------PVAEGEPRRHRARRRPGDEPDDRP 1030
Cdd:PHA03247 2650 ERPRDDPAPGRVSRPRRARRLGRA----AQASSPPQRPRRRaarptvgsltsladpPPPPPTPEPAPHALVSATPLPPGP 2725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1031 ERRPRPRDATR-----PARAADGEGDDGERKRRHRH---GPPAHDDrerrhrrrkenqgSGVPVSGPNLSTTRPIQQDLG 1102
Cdd:PHA03247 2726 AAARQASPALPaapapPAVPAGPATPGGPARPARPPttaGPPAPAP-------------PAAPAAGPPRRLTRPAVASLS 2792
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1103 --RQDLPLAEDLDNMKNNKL------------ATGEP----ASPHDSLGHSGLPPSPAKIGNSTNPG------------- 1151
Cdd:PHA03247 2793 esRESLPSPWDPADPPAAVLapaaalppaaspAGPLPpptsAQPTAPPPPPGPPPPSLPLGGSVAPGgdvrrrppsrspa 2872
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1152 --PALATNP------QNAASRRTPNNPGNPSNPGPPKTPenslivtnPSSTQPNSAKTARKPEHMAVEIPPacPPLNHTV 1223
Cdd:PHA03247 2873 akPAAPARPpvrrlaRPAVSRSTESFALPPDQPERPPQP--------QAPPPPQPQPQPPPPPQPQPPPPP--PPRPQPP 2942
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 568955985 1224 VQVNKNANPDPLPKKEEEKKEEEEADPGEDG------PKPMPPYSSMfiLSTTNPLRRL 1276
Cdd:PHA03247 2943 LAPTTDPAGAGEPSGAVPQPWLGALVPGRVAvprfrvPQPAPSREAP--ASSTPPLTGH 2999
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1605-1862 |
2.47e-71 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 239.48 E-value: 2.47e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1605 SPPFEYTIMAMIALNTIVLMMKFYGAS-VAYENALRVFNIVFTSLFSLECVLKVMAFGI-LNYFRDAWNIFDFVTVLGSI 1682
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPeEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1683 TDILVTEFGNnFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDGE 1762
Cdd:pfam00520 81 ISLVLSSVGS-LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1763 DedsdedefQITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKpcdknsgiltadcGNEFAYFYFVSFIFLCSFLM 1842
Cdd:pfam00520 160 N--------PDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK-------------GEFWAYIYFVSFIILGGFLL 218
|
250 260
....*....|....*....|
gi 568955985 1843 LNLFVAVIMDNFEYLTRDSS 1862
Cdd:pfam00520 219 LNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
188-462 |
6.00e-68 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 229.46 E-value: 6.00e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 188 WPPFEYMILATIIANCIVLALEQHLPDDDKTPmsERLDDTEPYFIGIFCFEAGIKIVALGFAFHkgsYLRNGWNVMDFVV 267
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT--TVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 268 VLTGILATVGTE----FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKF 343
Cdd:pfam00520 76 VLPSLISLVLSSvgslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 344 HTtcfeegtddiqgespapcgteepartcpngtkcqpyWEGPNNGITQFDNILFAVLTVFQCITMEGWTDLLYNSNDASG 423
Cdd:pfam00520 156 KT------------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG 199
|
250 260 270
....*....|....*....|....*....|....*....
gi 568955985 424 NTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 462
Cdd:pfam00520 200 EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
578-816 |
6.79e-57 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 197.87 E-value: 6.79e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 578 QAFYWTVLSLVALNTLCVAIVHYNQPEW-LSDFLYYAEFIFLGLFMSEMFIKMYGLG-TRPYFHSSFNCFDCGVIIGSIF 655
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGfKKRYFRSPWNILDFVVVLPSLI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 656 EVIWAVIKPGtsFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDE 735
Cdd:pfam00520 82 SLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 736 G--TPPTNFDTFPAAIMTVFQILTGEDWNEVMYDGIKSqggvQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE 813
Cdd:pfam00520 160 NpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDG----KGEFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTE 235
|
...
gi 568955985 814 LTK 816
Cdd:pfam00520 236 RTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1284-1515 |
2.57e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 196.33 E-value: 2.57e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1284 RYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHqgaYFRDLWNILDFIVVSG 1363
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1364 ALVAFAFTGNSKGKDINtikSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGKF 1443
Cdd:pfam00520 79 SLISLVLSSVGSLSGLR---VLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568955985 1444 fhctdeskeferdcrgkyllyeKNEVKARDREWkkyefHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFE 1515
Cdd:pfam00520 156 ----------------------KTWENPDNGRT-----NFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1934-2011 |
8.33e-35 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 462591 Cd Length: 77 Bit Score: 128.48 E-value: 8.33e-35
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568955985 1934 NSTLMALIRTALDIKIAKGGaDKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKA 2011
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1871-1924 |
8.62e-30 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
Pssm-ID: 465306 Cd Length: 54 Bit Score: 113.13 E-value: 8.62e-30
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 568955985 1871 EYVRVWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKKCPHRVACKRLLRMDLP 1924
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| Ca_chan_IQ |
smart01062 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1989-2019 |
9.95e-11 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 198130 Cd Length: 31 Bit Score: 58.39 E-value: 9.95e-11
10 20 30
....*....|....*....|....*....|.
gi 568955985 1989 TDLTVGKIYAAMMIMEYYRQSKAKKLQAMRE 2019
Cdd:smart01062 1 DELTVGKIYAAMLIQDYFRQFKSRKEQELLG 31
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2039-2453 |
1.88e-10 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 66.73 E-value: 1.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2039 EGGPSQNALPSTQLDPGGGLMAHEGGMKESPSWVtqrAQEMFQKTGTWSPERGPPIDMPNSQPNSQSVEMREMGTDGYSd 2118
Cdd:PHA03307 16 EGGEFFPRPPATPGDAADDLLSGSQGQLVSDSAE---LAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWS- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2119 sehylpmEGQTRAASMPRLPAENQRRRGRPRGNDlSTISDTSPMKRSASVLGPKARRldDYSLERVPPEENQRYH-QRRR 2197
Cdd:PHA03307 92 -------LSTLAPASPAREGSPTPPGPSSPDPPP-PTPPPASPPPSPAPDLSEMLRP--VGSPGPPPAASPPAAGaSPAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2198 DRGHRTSERSLGRYTDVDtglgtdlSMTTQSGDLPSKDR--DQDRGRPKDRkhrphhhhHHHHHHPPAPDRDRYAQERPD 2275
Cdd:PHA03307 162 VASDAASSRQAALPLSSP-------EETARAPSSPPAEPppSTPPAAASPR--------PPRRSSPISASASSPAPAPGR 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2276 TGRARAREQRWSRSPSEGREhtthrQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPaarrmAGP 2355
Cdd:PHA03307 227 SAADDAGASSSDSSSSESSG-----CGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRE-----RSP 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2356 AAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPRE-----PPGGAHDPAPRSPRTPRAAGCASPR---HGRRLPN 2427
Cdd:PHA03307 297 SPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSrgaavSPGPSPSRSPSPSRPPPPADPSSPRkrpRPSRAPS 376
|
410 420
....*....|....*....|....*.
gi 568955985 2428 GYYAGHGAPRPRTARRGAHDAYSESE 2453
Cdd:PHA03307 377 SPAASAGRPTRRRARAAVAGRARRRD 402
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
2029-2445 |
2.97e-07 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 55.84 E-value: 2.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2029 QRMEPPSPTQEGG-PSQNALPSTQLDPGGGLMAHEGGMKESPSWV------TQRAQEMFQKTGTWSPERGPPidmpnSQP 2101
Cdd:COG5180 14 TVPIPPNAARPVLsPELWAAANNDAVSQGDRSALASSPTRPYARKifepldIKLALGKPQLPSVAEPEAYLD-----PAP 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2102 NSQSVEMREMGTDGYSDSehylpMEGQTRAASMPRLPAENQRRRGRPRgnDLSTISDTSPMKRSASVlgpkaRRLDDYSL 2181
Cdd:COG5180 89 PKSSPDTPEEQLGAPAGD-----LLVLPAAKTPELAAGALPAPAAAAA--LPKAKVTREATSASAGV-----ALAAALLQ 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2182 ERVPPEEnqryhQRRRDRGHRTSERSLGRYTDVDTG-LGTDLSMTTQSGDLPSKDRDQDRGRPKDrkhRPHHHHHHHHHH 2260
Cdd:COG5180 157 RSDPILA-----KDPDGDSASTLPPPAEKLDKVLTEpRDALKDSPEKLDRPKVEVKDEAQEEPPD---LTGGADHPRPEA 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2261 PPAPDRDRYAQERPDTGRARAREQRWSRSPSEGREhtthrqgSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSY 2340
Cdd:COG5180 229 ASSPKVDPPSTSEARSRPATVDAQPEMRPPADAKE-------RRRAAIGDTPAAEPPGLPVLEAGSEPQSDAPEAETARP 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2341 SPAPRRPAARRMAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAA------ 2414
Cdd:COG5180 302 IDVKGVASAPPATRPVRPPGGARDPGTPRPGQPTERPAGVPEAASDAGQPPSAYPPAEEAVPGKPLEQGAPRPGssggdg 381
|
410 420 430
....*....|....*....|....*....|....*...
gi 568955985 2415 -------GCASPRHGRRLPNGYYAGHGAPRPRTARRGA 2445
Cdd:COG5180 382 apfqppnGAPQPGLGRRGAPGPPMGAGDLVQAALDGGG 419
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
894-1276 |
4.94e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 4.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 894 PTPYARPLRPDVKTHLDRPlVVDPQENR-------NNNTNKSRAPEALRP-TARPRESARDPDARRAWPGSPERAPGREG 965
Cdd:PHA03247 2571 PRPAPRPSEPAVTSRARRP-DAPPQSARprapvddRGDPRGPAPPSPLPPdTHAPDPPPPSPSPAANEPDPHPPPTVPPP 2649
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 966 PYGRESEPQQREHAPPREHAPWDAdterAKAGDAPRRHTHR---------------PVAEGEPRRHRARRRPGDEPDDRP 1030
Cdd:PHA03247 2650 ERPRDDPAPGRVSRPRRARRLGRA----AQASSPPQRPRRRaarptvgsltsladpPPPPPTPEPAPHALVSATPLPPGP 2725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1031 ERRPRPRDATR-----PARAADGEGDDGERKRRHRH---GPPAHDDrerrhrrrkenqgSGVPVSGPNLSTTRPIQQDLG 1102
Cdd:PHA03247 2726 AAARQASPALPaapapPAVPAGPATPGGPARPARPPttaGPPAPAP-------------PAAPAAGPPRRLTRPAVASLS 2792
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1103 --RQDLPLAEDLDNMKNNKL------------ATGEP----ASPHDSLGHSGLPPSPAKIGNSTNPG------------- 1151
Cdd:PHA03247 2793 esRESLPSPWDPADPPAAVLapaaalppaaspAGPLPpptsAQPTAPPPPPGPPPPSLPLGGSVAPGgdvrrrppsrspa 2872
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1152 --PALATNP------QNAASRRTPNNPGNPSNPGPPKTPenslivtnPSSTQPNSAKTARKPEHMAVEIPPacPPLNHTV 1223
Cdd:PHA03247 2873 akPAAPARPpvrrlaRPAVSRSTESFALPPDQPERPPQP--------QAPPPPQPQPQPPPPPQPQPPPPP--PPRPQPP 2942
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 568955985 1224 VQVNKNANPDPLPKKEEEKKEEEEADPGEDG------PKPMPPYSSMfiLSTTNPLRRL 1276
Cdd:PHA03247 2943 LAPTTDPAGAGEPSGAVPQPWLGALVPGRVAvprfrvPQPAPSREAP--ASSTPPLTGH 2999
|
|
| Pro-rich |
pfam15240 |
Proline-rich protein; This family includes several eukaryotic proline-rich proteins. |
2289-2438 |
7.95e-05 |
|
Proline-rich protein; This family includes several eukaryotic proline-rich proteins.
Pssm-ID: 464580 [Multi-domain] Cd Length: 167 Bit Score: 45.41 E-value: 7.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2289 SPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGrrqlPQTPCTPRPLVSyspaprrpaarrMAGPAAPPGGSPRGcrR 2368
Cdd:pfam15240 15 SAQSSSEDVSQEDSPSLISEEEGQSQQGGQGPQGP----PPGGFPPQPPAS------------DDPPGPPPPGGPQQ--P 76
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2369 APRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAGcaSPRHGRRLPNGYYAGHGAPRP 2438
Cdd:pfam15240 77 PPQGGKQKPQGPPPQGGPRPPPGKPQGPPPQGGNQQQGPPPPGKPQG--PPPQGGGPPPQGGNQQGPPPP 144
|
|
| PLN03223 |
PLN03223 |
Polycystin cation channel protein; Provisional |
720-813 |
9.49e-03 |
|
Polycystin cation channel protein; Provisional
Pssm-ID: 215637 [Multi-domain] Cd Length: 1634 Bit Score: 41.47 E-value: 9.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 720 ALLGMQLFGGQFnfdegtppTNFDTFPAAIMTVFQILTGeDWNEVMYDgIKSQGGVQGgMVFSIYFIVLTLFGNYTLLNV 799
Cdd:PLN03223 1345 AFIGHVIFGNAS--------VHFSDMTDSINSLFENLLG-DITYFNED-LKNLTGLQF-VVGMIYFYSYNIFVFMILFNF 1413
|
90
....*....|....*...
gi 568955985 800 FLAIAVDNL----ANAQE 813
Cdd:PLN03223 1414 LLAIICDAFgevkANAAE 1431
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1605-1862 |
2.47e-71 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 239.48 E-value: 2.47e-71
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1605 SPPFEYTIMAMIALNTIVLMMKFYGAS-VAYENALRVFNIVFTSLFSLECVLKVMAFGI-LNYFRDAWNIFDFVTVLGSI 1682
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPeEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFkKRYFRSPWNILDFVVVLPSL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1683 TDILVTEFGNnFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIGIDGE 1762
Cdd:pfam00520 81 ISLVLSSVGS-LSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1763 DedsdedefQITEHNNFRTFFQALMLLFRSATGEAWHNIMLSCLSGKpcdknsgiltadcGNEFAYFYFVSFIFLCSFLM 1842
Cdd:pfam00520 160 N--------PDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGK-------------GEFWAYIYFVSFIILGGFLL 218
|
250 260
....*....|....*....|
gi 568955985 1843 LNLFVAVIMDNFEYLTRDSS 1862
Cdd:pfam00520 219 LNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
188-462 |
6.00e-68 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 229.46 E-value: 6.00e-68
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 188 WPPFEYMILATIIANCIVLALEQHLPDDDKTPmsERLDDTEPYFIGIFCFEAGIKIVALGFAFHkgsYLRNGWNVMDFVV 267
Cdd:pfam00520 1 SRYFELFILLLILLNTIFLALETYFQPEEPLT--TVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVV 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 268 VLTGILATVGTE----FDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILIFAIIGLEFYMGKF 343
Cdd:pfam00520 76 VLPSLISLVLSSvgslSGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 344 HTtcfeegtddiqgespapcgteepartcpngtkcqpyWEGPNNGITQFDNILFAVLTVFQCITMEGWTDLLYNSNDASG 423
Cdd:pfam00520 156 KT------------------------------------WENPDNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKG 199
|
250 260 270
....*....|....*....|....*....|....*....
gi 568955985 424 NTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVE 462
Cdd:pfam00520 200 EFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTERTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
578-816 |
6.79e-57 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 197.87 E-value: 6.79e-57
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 578 QAFYWTVLSLVALNTLCVAIVHYNQPEW-LSDFLYYAEFIFLGLFMSEMFIKMYGLG-TRPYFHSSFNCFDCGVIIGSIF 655
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEpLTTVLEILDYVFTGIFTLEMLLKIIAAGfKKRYFRSPWNILDFVVVLPSLI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 656 EVIWAVIKPGtsFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFDE 735
Cdd:pfam00520 82 SLVLSSVGSL--SGLRVLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKLKTWE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 736 G--TPPTNFDTFPAAIMTVFQILTGEDWNEVMYDGIKSqggvQGGMVFSIYFIVLTLFGNYTLLNVFLAIAVDNLANAQE 813
Cdd:pfam00520 160 NpdNGRTNFDNFPNAFLWLFQTMTTEGWGDIMYDTIDG----KGEFWAYIYFVSFIILGGFLLLNLFIAVIIDNFQELTE 235
|
...
gi 568955985 814 LTK 816
Cdd:pfam00520 236 RTE 238
|
|
| Ion_trans |
pfam00520 |
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This ... |
1284-1515 |
2.57e-56 |
|
Ion transport protein; This family contains sodium, potassium and calcium ion channels. This family is 6 transmembrane helices in which the last two helices flank a loop which determines ion selectivity. In some sub-families (e.g. Na channels) the domain is repeated four times, whereas in others (e.g. K channels) the protein forms as a tetramer in the membrane.
Pssm-ID: 459842 [Multi-domain] Cd Length: 238 Bit Score: 196.33 E-value: 2.57e-56
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1284 RYFEMCILMVIAMSSIALAAEDPVQPNAPRNNVLRYFDYVFTGVFTFEMVIKMIDLGLVLHqgaYFRDLWNILDFIVVSG 1363
Cdd:pfam00520 2 RYFELFILLLILLNTIFLALETYFQPEEPLTTVLEILDYVFTGIFTLEMLLKIIAAGFKKR---YFRSPWNILDFVVVLP 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1364 ALVAFAFTGNSKGKDINtikSLRVLRVLRPLKTIKRLPKLKAVFDCVVNSLKNVFNILIVYMLFMFIFAVVAVQLFKGKF 1443
Cdd:pfam00520 79 SLISLVLSSVGSLSGLR---VLRLLRLLRLLRLIRRLEGLRTLVNSLIRSLKSLGNLLLLLLLFLFIFAIIGYQLFGGKL 155
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 568955985 1444 fhctdeskeferdcrgkyllyeKNEVKARDREWkkyefHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATFE 1515
Cdd:pfam00520 156 ----------------------KTWENPDNGRT-----NFDNFPNAFLWLFQTMTTEGWGDIMYDTIDGKGE 200
|
|
| Ca_chan_IQ |
pfam08763 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1934-2011 |
8.33e-35 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 462591 Cd Length: 77 Bit Score: 128.48 E-value: 8.33e-35
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568955985 1934 NSTLMALIRTALDIKIAKGGaDKQQMDAELRKEMMAIWPNLSQKTLDLLVTPHKSTDLTVGKIYAAMMIMEYYRQSKA 2011
Cdd:pfam08763 1 TATLFALIRTSLKIKLAPAG-EMDQADAELRKIIKKIWPRLSQKTLDLLVPPPSDDEMTVGKIYAALLIQDYYRQNKA 77
|
|
| GPHH |
pfam16905 |
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in ... |
1871-1924 |
8.62e-30 |
|
Voltage-dependent L-type calcium channel, IQ-associated; GPHH is a sequence motif found in this short domain on voltage-dependent L-type calcium channel proteins in eukaryotes. The domain is closely associated with the IQ-domain, pfam08763.
Pssm-ID: 465306 Cd Length: 54 Bit Score: 113.13 E-value: 8.62e-30
10 20 30 40 50
....*....|....*....|....*....|....*....|....*....|....
gi 568955985 1871 EYVRVWAEYDPAACGRIHYKDMYSLLRVISPPLGLGKKCPHRVACKRLLRMDLP 1924
Cdd:pfam16905 1 EFVRVWAEYDPAATGRISYQDMYELLRRISPPLGFGKKCPARVAYKRLVRMNMP 54
|
|
| Ca_chan_IQ |
smart01062 |
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular ... |
1989-2019 |
9.95e-11 |
|
Voltage gated calcium channel IQ domain; Voltage gated calcium channels control cellular calcium entry in response to changes in membrane potential. The isoleucine-glutamine (IQ) motif in the voltage gated calcium channel IQ domain interacts with hydrophobic pockets of Ca2+/calmodulin. The interaction regulates two self-regulatory calcium dependent feedback mechanism, calcium dependent inactivation (CDI), and calcium-dependent facilitation (CDF).
Pssm-ID: 198130 Cd Length: 31 Bit Score: 58.39 E-value: 9.95e-11
10 20 30
....*....|....*....|....*....|.
gi 568955985 1989 TDLTVGKIYAAMMIMEYYRQSKAKKLQAMRE 2019
Cdd:smart01062 1 DELTVGKIYAAMLIQDYFRQFKSRKEQELLG 31
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2039-2453 |
1.88e-10 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 66.73 E-value: 1.88e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2039 EGGPSQNALPSTQLDPGGGLMAHEGGMKESPSWVtqrAQEMFQKTGTWSPERGPPIDMPNSQPNSQSVEMREMGTDGYSd 2118
Cdd:PHA03307 16 EGGEFFPRPPATPGDAADDLLSGSQGQLVSDSAE---LAAVTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWS- 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2119 sehylpmEGQTRAASMPRLPAENQRRRGRPRGNDlSTISDTSPMKRSASVLGPKARRldDYSLERVPPEENQRYH-QRRR 2197
Cdd:PHA03307 92 -------LSTLAPASPAREGSPTPPGPSSPDPPP-PTPPPASPPPSPAPDLSEMLRP--VGSPGPPPAASPPAAGaSPAA 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2198 DRGHRTSERSLGRYTDVDtglgtdlSMTTQSGDLPSKDR--DQDRGRPKDRkhrphhhhHHHHHHPPAPDRDRYAQERPD 2275
Cdd:PHA03307 162 VASDAASSRQAALPLSSP-------EETARAPSSPPAEPppSTPPAAASPR--------PPRRSSPISASASSPAPAPGR 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2276 TGRARAREQRWSRSPSEGREhtthrQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPaarrmAGP 2355
Cdd:PHA03307 227 SAADDAGASSSDSSSSESSG-----CGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRE-----RSP 296
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2356 AAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPRE-----PPGGAHDPAPRSPRTPRAAGCASPR---HGRRLPN 2427
Cdd:PHA03307 297 SPSPSSPGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSrgaavSPGPSPSRSPSPSRPPPPADPSSPRkrpRPSRAPS 376
|
410 420
....*....|....*....|....*.
gi 568955985 2428 GYYAGHGAPRPRTARRGAHDAYSESE 2453
Cdd:PHA03307 377 SPAASAGRPTRRRARAAVAGRARRRD 402
|
|
| PKD_channel |
pfam08016 |
Polycystin cation channel; This family contains the cation channel region from group II of ... |
1644-1855 |
5.90e-10 |
|
Polycystin cation channel; This family contains the cation channel region from group II of Transient receptor potential (TRP) channels, the TRPP subfamily, including PKD1, PKD2, PKD2L and mucolipin proteins.
Pssm-ID: 462341 [Multi-domain] Cd Length: 225 Bit Score: 61.91 E-value: 5.90e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1644 VFTSLFSLECVLKVMAFGiLNYFRDAWNIFDFVTVLGSITDILvtefgnnfinLSFLRLFRAARLIKLLRQ--------- 1714
Cdd:pfam08016 19 VFFLYFVVEEILKIRKHR-PSYLRSVWNLLDLAIVILSVVLIV----------LNIYRDFLADRLIKSVEAspvtfidfd 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1715 -----GYTIRIL-----------LWTFVQSFK-----------ALPYVC---LLIAMLFFIYAIIGMQVFGNigidgede 1764
Cdd:pfam08016 88 rvaqlDNLYRIIlaflvfltwlkLFKVLRFNKtmslftktlsrAWKDLAgfaLMFVIFFFAYAQFGYLLFGT-------- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1765 dsdedefqitEHNNFRTFFQALMLLFRSATG-EAWHNImlsclsgKPCDKNSGILtadcgnefayfYFVSFIFLCSFLML 1843
Cdd:pfam08016 160 ----------QAPNFSNFVKSILTLFRTILGdFGYNEI-------FSGNRVLGPL-----------LFLTFVFLVIFILL 211
|
250
....*....|..
gi 568955985 1844 NLFVAVIMDNFE 1855
Cdd:pfam08016 212 NLFLAIINDSYV 223
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2034-2438 |
3.49e-08 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 59.41 E-value: 3.49e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2034 PSPTQEGGPSQNALPSTQLDPGGGLMAHEGGMKESPSW------VTQRAQEMFQKTGTWSPERGPP-IDMPNSQPNSQSV 2106
Cdd:PHA03307 53 VTVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWslstlaPASPAREGSPTPPGPSSPDPPPpTPPPASPPPSPAP 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2107 EMREMGTDGYSDSEhylPMEGQTRAASMPRLPAENQRRRGRPRGNDLSTISDTSPMKRSASV-LGPKARRLDDYSLERVP 2185
Cdd:PHA03307 133 DLSEMLRPVGSPGP---PPAASPPAAGASPAAVASDAASSRQAALPLSSPEETARAPSSPPAePPPSTPPAAASPRPPRR 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2186 PEENQRYHQRRRDRGHRTSERSLGRYTDVDT---GLGTDLSMTTQSGDlPSKDRDQDRGRPKDRKHRPHHHHHHHHHHPP 2262
Cdd:PHA03307 210 SSPISASASSPAPAPGRSAADDAGASSSDSSsseSSGCGWGPENECPL-PRPAPITLPTRIWEASGWNGPSSRPGPASSS 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2263 APDRDRYAQERPDTGRARAREQRWSRSPSEGREHTThrQGSSSVSGSPAPSTSGTSTPRRGRRqlPQTPCTPRPlvsysp 2342
Cdd:PHA03307 289 SSPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRES--SSSSTSSSSESSRGAAVSPGPSPSR--SPSPSRPPP------ 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2343 aprrpaarrmAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPR-GADYTEPDSPREPPGGAhdPAPRSPRTPRAAGCASPRH 2421
Cdd:PHA03307 359 ----------PADPSSPRKRPRPSRAPSSPAASAGRPTRRRaRAAVAGRARRRDATGRF--PAGRPRPSPLDAGAASGAF 426
|
410 420
....*....|....*....|
gi 568955985 2422 GRRLPNGYYAGH---GAPRP 2438
Cdd:PHA03307 427 YARYPLLTPSGEpwpGSPPP 446
|
|
| PBP1 |
COG5180 |
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification]; ... |
2029-2445 |
2.97e-07 |
|
PAB1-binding protein, interacts with poly(A)-binding protein [RNA processing and modification];
Pssm-ID: 444064 [Multi-domain] Cd Length: 548 Bit Score: 55.84 E-value: 2.97e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2029 QRMEPPSPTQEGG-PSQNALPSTQLDPGGGLMAHEGGMKESPSWV------TQRAQEMFQKTGTWSPERGPPidmpnSQP 2101
Cdd:COG5180 14 TVPIPPNAARPVLsPELWAAANNDAVSQGDRSALASSPTRPYARKifepldIKLALGKPQLPSVAEPEAYLD-----PAP 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2102 NSQSVEMREMGTDGYSDSehylpMEGQTRAASMPRLPAENQRRRGRPRgnDLSTISDTSPMKRSASVlgpkaRRLDDYSL 2181
Cdd:COG5180 89 PKSSPDTPEEQLGAPAGD-----LLVLPAAKTPELAAGALPAPAAAAA--LPKAKVTREATSASAGV-----ALAAALLQ 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2182 ERVPPEEnqryhQRRRDRGHRTSERSLGRYTDVDTG-LGTDLSMTTQSGDLPSKDRDQDRGRPKDrkhRPHHHHHHHHHH 2260
Cdd:COG5180 157 RSDPILA-----KDPDGDSASTLPPPAEKLDKVLTEpRDALKDSPEKLDRPKVEVKDEAQEEPPD---LTGGADHPRPEA 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2261 PPAPDRDRYAQERPDTGRARAREQRWSRSPSEGREhtthrqgSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSY 2340
Cdd:COG5180 229 ASSPKVDPPSTSEARSRPATVDAQPEMRPPADAKE-------RRRAAIGDTPAAEPPGLPVLEAGSEPQSDAPEAETARP 301
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2341 SPAPRRPAARRMAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAA------ 2414
Cdd:COG5180 302 IDVKGVASAPPATRPVRPPGGARDPGTPRPGQPTERPAGVPEAASDAGQPPSAYPPAEEAVPGKPLEQGAPRPGssggdg 381
|
410 420 430
....*....|....*....|....*....|....*...
gi 568955985 2415 -------GCASPRHGRRLPNGYYAGHGAPRPRTARRGA 2445
Cdd:COG5180 382 apfqppnGAPQPGLGRRGAPGPPMGAGDLVQAALDGGG 419
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2267-2453 |
3.45e-07 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 55.95 E-value: 3.45e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2267 DRYAQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPrrGRRQLPQTPCTPRPlvsyspaprr 2346
Cdd:PHA03307 793 EAAFRRPGRLRRSGPAADAASRTASKRKSRSHTPDGGSESSGPARPPGAAARPP--PARSSESSKSKPAA---------- 860
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2347 paarrmagPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPrePPGGAHDPAPRSPRTPRAAGCASPRHG-RRL 2425
Cdd:PHA03307 861 --------AGGRARGKNGRRRPRPPEPRARPGAAAPPKAAAAAPPAG--APAPRPRPAPRVKLGPMPPGGPDPRGGfRRV 930
|
170 180
....*....|....*....|....*...
gi 568955985 2426 PNGYYagHGaPRPRTArrgAHDAYSESE 2453
Cdd:PHA03307 931 PPGDL--HT-PAPSAA---ALAAYCPPE 952
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2263-2418 |
3.37e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.02 E-value: 3.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2263 APDRDRYAQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSsvsgsPAPSTSGTSTPRRGRRQL--------------- 2327
Cdd:PHA03247 2628 PPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARR-----LGRAAQASSPPQRPRRRAarptvgsltsladpp 2702
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2328 --PQTP-CTPRPLVSYSPAPRRPAARRMAGPAAPPGGSPRGCRRAPRWPA-HAPEGPRPRGADYTEPDSPREPPGGahdP 2403
Cdd:PHA03247 2703 ppPPTPePAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGgPARPARPPTTAGPPAPAPPAAPAAG---P 2779
|
170
....*....|....*
gi 568955985 2404 APRSPRTPRAAGCAS 2418
Cdd:PHA03247 2780 PRRLTRPAVASLSES 2794
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2303-2452 |
3.51e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 53.02 E-value: 3.51e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2303 SSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPlvsyspaPRRPAARRMAGPAAPPGGSPRGCRRAPRWPAHAPEGPRP 2382
Cdd:PHA03247 2544 ASDDAGDPPPPLPPAAPPAAPDRSVPPPRPAPRP-------SEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSP 2616
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2383 RGADYTEPDSPrePPGGAhdPAPRSPRTPRAAGCASPRHGRRLPngyyAGHGAPRPRTARRGAHDAYSES 2452
Cdd:PHA03247 2617 LPPDTHAPDPP--PPSPS--PAANEPDPHPPPTVPPPERPRDDP----APGRVSRPRRARRLGRAAQASS 2678
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2263-2456 |
6.05e-06 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 52.10 E-value: 6.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2263 APDRDRYAQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPST-SGTSTPRRGRRQLPQTPCTPRPLVSYS 2341
Cdd:PHA03307 79 APANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPaPDLSEMLRPVGSPGPPPAASPPAAGAS 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2342 PAPRRPAARR---------MAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRG---ADYTEPDSPRePPGGAHDPAPRSP- 2408
Cdd:PHA03307 159 PAAVASDAASsrqaalplsSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSspiSASASSPAPA-PGRSAADDAGASSs 237
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568955985 2409 --RTPRAAGCAS--------PRHGR-RLPNGYYAGHGA--PRPRTARRGAHDAYSESEDDW 2456
Cdd:PHA03307 238 dsSSSESSGCGWgpenecplPRPAPiTLPTRIWEASGWngPSSRPGPASSSSSPRERSPSP 298
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2263-2441 |
1.37e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 50.94 E-value: 1.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2263 APDRDRYAQERPDTGRARAREQRWSRSPsEGREHTTHRQGSSSVSGSPAPSTSGTSTPRrgRRQLPQTPCTPRPLvsysp 2342
Cdd:PHA03307 847 PARSSESSKSKPAAAGGRARGKNGRRRP-RPPEPRARPGAAAPPKAAAAAPPAGAPAPR--PRPAPRVKLGPMPP----- 918
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2343 aprrpaarrmAGPAappggsPRGC-RRAPRWPAHAPEGPRPRGADYTEP-------DSPREPPggAHDPAPRspRTPR-- 2412
Cdd:PHA03307 919 ----------GGPD------PRGGfRRVPPGDLHTPAPSAAALAAYCPPevvaelvDHPLFPE--PWRPALA--FDPEal 978
|
170 180 190
....*....|....*....|....*....|..
gi 568955985 2413 ---AAGCASPRHGRRLPNGYYAGHGAPRPRTA 2441
Cdd:PHA03307 979 aeiAARCGGPPPRSGSAFGPLRASGPLRRRAA 1010
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2273-2456 |
2.96e-05 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 49.60 E-value: 2.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2273 RPDTGRARAREQRWSRSPSEGREHTTHR-QGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPAARR 2351
Cdd:PRK07764 587 VVGPAPGAAGGEGPPAPASSGPPEEAARpAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGG 666
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2352 MAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPdSPREPPGGAHDPAPRSPRTPRAAGCASPRHGRRLPNGYYA 2431
Cdd:PRK07764 667 DGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAP-AATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEP 745
|
170 180
....*....|....*....|....*
gi 568955985 2432 GHGAPRPRTARRGAHDAYSESEDDW 2456
Cdd:PRK07764 746 DDPPDPAGAPAQPPPPPAPAPAAAP 770
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
894-1276 |
4.94e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 49.17 E-value: 4.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 894 PTPYARPLRPDVKTHLDRPlVVDPQENR-------NNNTNKSRAPEALRP-TARPRESARDPDARRAWPGSPERAPGREG 965
Cdd:PHA03247 2571 PRPAPRPSEPAVTSRARRP-DAPPQSARprapvddRGDPRGPAPPSPLPPdTHAPDPPPPSPSPAANEPDPHPPPTVPPP 2649
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 966 PYGRESEPQQREHAPPREHAPWDAdterAKAGDAPRRHTHR---------------PVAEGEPRRHRARRRPGDEPDDRP 1030
Cdd:PHA03247 2650 ERPRDDPAPGRVSRPRRARRLGRA----AQASSPPQRPRRRaarptvgsltsladpPPPPPTPEPAPHALVSATPLPPGP 2725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1031 ERRPRPRDATR-----PARAADGEGDDGERKRRHRH---GPPAHDDrerrhrrrkenqgSGVPVSGPNLSTTRPIQQDLG 1102
Cdd:PHA03247 2726 AAARQASPALPaapapPAVPAGPATPGGPARPARPPttaGPPAPAP-------------PAAPAAGPPRRLTRPAVASLS 2792
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1103 --RQDLPLAEDLDNMKNNKL------------ATGEP----ASPHDSLGHSGLPPSPAKIGNSTNPG------------- 1151
Cdd:PHA03247 2793 esRESLPSPWDPADPPAAVLapaaalppaaspAGPLPpptsAQPTAPPPPPGPPPPSLPLGGSVAPGgdvrrrppsrspa 2872
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1152 --PALATNP------QNAASRRTPNNPGNPSNPGPPKTPenslivtnPSSTQPNSAKTARKPEHMAVEIPPacPPLNHTV 1223
Cdd:PHA03247 2873 akPAAPARPpvrrlaRPAVSRSTESFALPPDQPERPPQP--------QAPPPPQPQPQPPPPPQPQPPPPP--PPRPQPP 2942
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 568955985 1224 VQVNKNANPDPLPKKEEEKKEEEEADPGEDG------PKPMPPYSSMfiLSTTNPLRRL 1276
Cdd:PHA03247 2943 LAPTTDPAGAGEPSGAVPQPWLGALVPGRVAvprfrvPQPAPSREAP--ASSTPPLTGH 2999
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
2288-2424 |
5.79e-05 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 47.70 E-value: 5.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2288 RSPSEgREHTTHRQGS----SSVSGSPAPSTSGTSTPR-RGRRQLPQTPCTPRPLVSYSPAPRRPAARRMAGPAAPPGGS 2362
Cdd:PHA03381 5 RSPRP-KPHGTDEVEAdvyyDFISPDASPARVSFEEPAdRARRGAGQARGRSQAERRFHHYDEARADYPYYTGSSSEDER 83
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568955985 2363 PRGCRRaPRWPAHAPEGPRP---RGAdyTEPDSPREPPGGAHDPAPRSPRTPRAagcASPRHGRR 2424
Cdd:PHA03381 84 PADPRP-SRRPHAQPEASGPgpaRGA--RGPAGSRGRGRRAESPSPRDPPNPKG---ASAPRGRK 142
|
|
| Pro-rich |
pfam15240 |
Proline-rich protein; This family includes several eukaryotic proline-rich proteins. |
2289-2438 |
7.95e-05 |
|
Proline-rich protein; This family includes several eukaryotic proline-rich proteins.
Pssm-ID: 464580 [Multi-domain] Cd Length: 167 Bit Score: 45.41 E-value: 7.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2289 SPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGrrqlPQTPCTPRPLVSyspaprrpaarrMAGPAAPPGGSPRGcrR 2368
Cdd:pfam15240 15 SAQSSSEDVSQEDSPSLISEEEGQSQQGGQGPQGP----PPGGFPPQPPAS------------DDPPGPPPPGGPQQ--P 76
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2369 APRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAGcaSPRHGRRLPNGYYAGHGAPRP 2438
Cdd:pfam15240 77 PPQGGKQKPQGPPPQGGPRPPPGKPQGPPPQGGNQQQGPPPPGKPQG--PPPQGGGPPPQGGNQQGPPPP 144
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
2273-2443 |
9.75e-05 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 47.86 E-value: 9.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2273 RPDTGRARAREQRWS------RSPSE--------GREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPL- 2337
Cdd:PHA03307 738 RYSPRRARARASAWDitdalfSNPSLvpaklaeaLALLEPAEPQRGAGSSPPVRAEAAFRRPGRLRRSGPAADAASRTAs 817
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2338 VSYSPAPRRPAARRMAGPAAPPG--GSPRGCRRAP-RWPAHAPEGPRPRGADYTEPDSPREP---------PGGAHDPAP 2405
Cdd:PHA03307 818 KRKSRSHTPDGGSESSGPARPPGaaARPPPARSSEsSKSKPAAAGGRARGKNGRRRPRPPEPrarpgaaapPKAAAAAPP 897
|
170 180 190
....*....|....*....|....*....|....*...
gi 568955985 2406 RSPRTPRAAGCASPRHGRRLPNGyyaghgaPRPRTARR 2443
Cdd:PHA03307 898 AGAPAPRPRPAPRVKLGPMPPGG-------PDPRGGFR 928
|
|
| PRK12678 |
PRK12678 |
transcription termination factor Rho; Provisional |
870-1062 |
1.03e-04 |
|
transcription termination factor Rho; Provisional
Pssm-ID: 237171 [Multi-domain] Cd Length: 672 Bit Score: 47.59 E-value: 1.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 870 TSEMRKQNLLAS-REALYG---DAAERWPTPYARPLRPDVKTHLDRPLVVDPQENRnnNTNKSRAPEALRPTARPRESAR 945
Cdd:PRK12678 43 TSGMRKGELIAAiKEARGGgaaAAAATPAAPAAAARRAARAAAAARQAEQPAAEAA--AAKAEAAPAARAAAAAAAEAAS 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 946 DPDARRAWPGSPERAPGREGPYGRESEPQQREHAPPREHApwDADTERAKAGDAPRRHTHRPVAEGEPrrhrarrRPGDE 1025
Cdd:PRK12678 121 APEAAQARERRERGEAARRGAARKAGEGGEQPATEARADA--AERTEEEERDERRRRGDREDRQAEAE-------RGERG 191
|
170 180 190
....*....|....*....|....*....|....*..
gi 568955985 1026 PDDRPERRPRPRDATRPARAADGEGDDGERKRRHRHG 1062
Cdd:PRK12678 192 RREERGRDGDDRDRRDRREQGDRREERGRRDGGDRRG 228
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
2312-2445 |
4.02e-04 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 45.83 E-value: 4.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2312 PSTSGTSTPRR-----GRRQLPqtPCTPRPlvsyspaprrpaarrMAGPAAPPGGS--PRGCRRAPRWPAHAPEGPRPRG 2384
Cdd:PHA03378 676 PSPTGANTMLPiqwapGTMQPP--PRAPTP---------------MRPPAAPPGRAqrPAAATGRARPPAAAPGRARPPA 738
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568955985 2385 ADYTEPDSPREPPGGAHDP--APRSPRTPRAA-GCASPRHGRRLPngyyaghgaPRPRTARRGA 2445
Cdd:PHA03378 739 AAPGRARPPAAAPGRARPPaaAPGRARPPAAApGAPTPQPPPQAP---------PAPQQRPRGA 793
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2352-2453 |
6.02e-04 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 45.36 E-value: 6.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2352 MAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADytePDSPREPPGGAHDPAPRSPRTPRAAGCASPRHGRRLPNGyyA 2431
Cdd:PRK07764 387 VAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAA---APAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAA--A 461
|
90 100
....*....|....*....|..
gi 568955985 2432 GHGAPRPRTARRGAHDAYSESE 2453
Cdd:PRK07764 462 PSAQPAPAPAAAPEPTAAPAPA 483
|
|
| PHA03381 |
PHA03381 |
tegument protein VP22; Provisional |
2352-2445 |
9.04e-04 |
|
tegument protein VP22; Provisional
Pssm-ID: 177618 [Multi-domain] Cd Length: 290 Bit Score: 43.85 E-value: 9.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2352 MAGPAAPPGGSPRGCRRAPRWPAHA-PEGPR------PRGADY-------TEPDSPREPP--------GGAHDP----AP 2405
Cdd:PHA03381 29 DASPARVSFEEPADRARRGAGQARGrSQAERrfhhydEARADYpyytgssSEDERPADPRpsrrphaqPEASGPgparGA 108
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 568955985 2406 RSPRTPRAAGCASPRHGRRLPNgyyAGHGAPRPRtARRGA 2445
Cdd:PHA03381 109 RGPAGSRGRGRRAESPSPRDPP---NPKGASAPR-GRKSA 144
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2263-2420 |
1.14e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 44.21 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2263 APDRDRYAQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQ-LPQTPCTPRPLVSYS 2341
Cdd:PRK07764 635 APAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPaQPAPAPAATPPAGQA 714
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568955985 2342 PAPRRPAARRMAGPAAPPGGSPRGcrraPRWPAHAPEGPRPRGADYTEPDSPREPPGGAhdPAPRSPRTPRAAGCASPR 2420
Cdd:PRK07764 715 DDPAAQPPQAAQGASAPSPAADDP----VPLPPEPDDPPDPAGAPAQPPPPPAPAPAAA--PAAAPPPSPPSEEEEMAE 787
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2353-2445 |
2.05e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.44 E-value: 2.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2353 AGPAAPPGGSPRGCRRAPRWPAHAPE---GPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAGCASP-RHGRRLPNG 2428
Cdd:PRK07764 405 APAAAPAPAAAAPAAAAAPAPAAAPQpapAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAAAPePTAAPAPAP 484
|
90
....*....|....*..
gi 568955985 2429 YYAGHGAPRPRTARRGA 2445
Cdd:PRK07764 485 PAAPAPAAAPAAPAAPA 501
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
879-1264 |
2.48e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.39 E-value: 2.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 879 LASREAlyGDAAERWPtPYARPLRPDVKTHLDRPlvvdpqenrnnntnksrAPEALRPTARPREsaRDPDARrAWPGSPe 958
Cdd:PHA03247 2543 LASDDA--GDPPPPLP-PAAPPAAPDRSVPPPRP-----------------APRPSEPAVTSRA--RRPDAP-PQSARP- 2598
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 959 RAPGreGPYGRESEPQQREHAPPREHAP-WDADTERAKAGDAPRRHthrPVAEGEPRRHRARRRPGDEPDDRPerrprpr 1037
Cdd:PHA03247 2599 RAPV--DDRGDPRGPAPPSPLPPDTHAPdPPPPSPSPAANEPDPHP---PPTVPPPERPRDDPAPGRVSRPRR------- 2666
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1038 dATRPARAADGEGDdgERKRRHRHGPPAHddrerrhrrrkenqgsgvpvsGPNLSTTRPIQQDlgrqdlplaedldnmkn 1117
Cdd:PHA03247 2667 -ARRLGRAAQASSP--PQRPRRRAARPTV---------------------GSLTSLADPPPPP----------------- 2705
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 1118 nklATGEPAsPHDSLGHSGLPPSPAKIGNSTNPGPALATNPQNAASRRTPNNPGNPSNPGPPKTPENSLIVTNPSSTQPn 1197
Cdd:PHA03247 2706 ---PTPEPA-PHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPP- 2780
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568955985 1198 sAKTARKPEHMAVEIPPACP----PLNHTVVQVNKNA--NPDPLPKKEEEKKEEEEADPGEDGPKPMPPYSSM 1264
Cdd:PHA03247 2781 -RRLTRPAVASLSESRESLPspwdPADPPAAVLAPAAalPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPL 2852
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2353-2445 |
2.95e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 43.05 E-value: 2.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2353 AGPAAPPGGSPRGCRRAPRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRSPRTPRAAGcASPRHGRRLPNGYYAG 2432
Cdd:PRK07764 586 AVVGPAPGAAGGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVA-APEHHPKHVAVPDASD 664
|
90
....*....|...
gi 568955985 2433 HGAPRPRTARRGA 2445
Cdd:PRK07764 665 GGDGWPAKAGGAA 677
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2243-2444 |
3.62e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 43.00 E-value: 3.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2243 PKDRKHRPHHHHHHHHHHPPAPDRDRYAQ-----ERPDTGRARAREQRWSrSPSEGREHTTHRQGSSSVSGS-------- 2309
Cdd:PHA03247 2628 PPSPSPAANEPDPHPPPTVPPPERPRDDPapgrvSRPRRARRLGRAAQAS-SPPQRPRRRAARPTVGSLTSLadpppppp 2706
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2310 -----PAPSTSGTSTP---RRGRRQLPQTPCTPRP------LVSYSPAPRRPAARRMAG------PAAPPGGSPRGCRRA 2369
Cdd:PHA03247 2707 tpepaPHALVSATPLPpgpAAARQASPALPAAPAPpavpagPATPGGPARPARPPTTAGppapapPAAPAAGPPRRLTRP 2786
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2370 PRWPAHAPEGPRPRGADYTEPDSPREPPGGA----HDPAPRSPRTPRAAGCASPRHGRRLPNGYYAGHG-APRPRTARRG 2444
Cdd:PHA03247 2787 AVASLSESRESLPSPWDPADPPAAVLAPAAAlppaASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSvAPGGDVRRRP 2866
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2273-2455 |
3.90e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.67 E-value: 3.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2273 RPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPLVSYSPAPRRPAARRM 2352
Cdd:PRK07764 601 PAPASSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAA 680
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2353 AGPAAPPGGSPRGCRRA-------PRWPAHAPEGPRPRGADYTEPDSPREPPGGAHDPAPRsPRTPRAAGCASPrhgrrl 2425
Cdd:PRK07764 681 PPPAPAPAAPAAPAGAApaqpapaPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPL-PPEPDDPPDPAG------ 753
|
170 180 190
....*....|....*....|....*....|
gi 568955985 2426 PNGYYAGHGAPRPRTARRGAHDAYSESEDD 2455
Cdd:PRK07764 754 APAQPPPPPAPAPAAAPAAAPPPSPPSEEE 783
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
2287-2412 |
3.96e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 42.75 E-value: 3.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2287 SRSPSEGREHTTHRQGSSSVSGSPA----PST--------SGTSTPRRGRRqlPQTPCTPRPLVSYSPaprrpaarrmag 2354
Cdd:PTZ00449 540 SDEPKEGGKPGETKEGEVGKKPGPAkehkPSKiptlskkpEFPKDPKHPKD--PEEPKKPKRPRSAQR------------ 605
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 568955985 2355 PAAPPggSPR-----GCRRAPRWPaHAPEGPRpRGADYTEPDSPREPPGGAHDPAPRSPRTPR 2412
Cdd:PTZ00449 606 PTRPK--SPKlpellDIPKSPKRP-ESPKSPK-RPPPPQRPSSPERPEGPKIIKSPKPPKSPK 664
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
2087-2426 |
4.18e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 4.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2087 SPERGPPIDMPNSQPNSQSVEMREMGTDgysdsehyLPMEGQTraasmPRLPAENqrrRGRPRGNDLSTIS--DTSPMKR 2164
Cdd:PHA03247 2563 APDRSVPPPRPAPRPSEPAVTSRARRPD--------APPQSAR-----PRAPVDD---RGDPRGPAPPSPLppDTHAPDP 2626
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2165 SASVLGPKARRLDD-YSLERVPPEENQRYHQRRRDRGHRTSeRSLGRytdvdtglGTDLSMTTQsGDLPSKDRD-----Q 2238
Cdd:PHA03247 2627 PPPSPSPAANEPDPhPPPTVPPPERPRDDPAPGRVSRPRRA-RRLGR--------AAQASSPPQ-RPRRRAARPtvgslT 2696
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2239 DRGRPKDRKHRPHHHHHHHHHHPPAPdrdryaqERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTS 2318
Cdd:PHA03247 2697 SLADPPPPPPTPEPAPHALVSATPLP-------PGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAP 2769
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2319 TPRRGRRQLPQtPCTPRPLV-----------SYSPAPRRPAARRMAGPAAPPGGSPRGCRRAPRWPAHAPEGPRPrgady 2387
Cdd:PHA03247 2770 APPAAPAAGPP-RRLTRPAVaslsesreslpSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPP----- 2843
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 568955985 2388 tEPDSPREPPGGAHDP----APRSPRTPRAAGCASPRH--GRRLP 2426
Cdd:PHA03247 2844 -GPPPPSLPLGGSVAPggdvRRRPPSRSPAAKPAAPARppVRRLA 2887
|
|
| PHA03378 |
PHA03378 |
EBNA-3B; Provisional |
2290-2419 |
4.64e-03 |
|
EBNA-3B; Provisional
Pssm-ID: 223065 [Multi-domain] Cd Length: 991 Bit Score: 42.36 E-value: 4.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2290 PSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRR---GRRQLPQTPCTPRPLVSySPAPRRPAARRMAGPAAPPGGSPRGC 2366
Cdd:PHA03378 676 PSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAappGRAQRPAAATGRARPPA-AAPGRARPPAAAPGRARPPAAAPGRA 754
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 568955985 2367 RRaprwPAHAPEGPRPRGADYTEPdSPREPPGGAhdPAPRspRTPRAAGCASP 2419
Cdd:PHA03378 755 RP----PAAAPGRARPPAAAPGAP-TPQPPPQAP--PAPQ--QRPRGAPTPQP 798
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
2270-2420 |
5.91e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 41.90 E-value: 5.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2270 AQERPDTGRARAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCTPRPlvSYSPAPRRPAA 2349
Cdd:PRK07764 626 APAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAA--PAGAAPAQPAP 703
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 568955985 2350 RRMAGPAAPPGGSPRGcrrAPRWPAHAPEGPRPRGADY----TEPDSPREPPGGAHDPAPRSPRTPRAAGCASPR 2420
Cdd:PRK07764 704 APAATPPAGQADDPAA---QPPQAAQGASAPSPAADDPvplpPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPP 775
|
|
| dnaA |
PRK14086 |
chromosomal replication initiator protein DnaA; |
2280-2438 |
7.74e-03 |
|
chromosomal replication initiator protein DnaA;
Pssm-ID: 237605 [Multi-domain] Cd Length: 617 Bit Score: 41.35 E-value: 7.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2280 RAREQRWSRSPSEGREHTTHRQGSSSVSGSPAPSTSGTSTPRRGRRQLPQTPCT-PRPLVSYSPAPRRPAARRMAGPAAP 2358
Cdd:PRK14086 104 RTSEPELPRPGRRPYEGYGGPRADDRPPGLPRQDQLPTARPAYPAYQQRPEPGAwPRAADDYGWQQQRLGFPPRAPYASP 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 2359 PGGSPRGCRRAPRWPAHAPEGPRPR------GADYTEP-----DSPREPPGGAHDPApRSPRTPRAAGCASPRHGRRLPn 2427
Cdd:PRK14086 184 ASYAPEQERDREPYDAGRPEYDQRRrdydhpRPDWDRPrrdrtDRPEPPPGAGHVHR-GGPGPPERDDAPVVPIRPSAP- 261
|
170
....*....|.
gi 568955985 2428 GYYAGHGAPRP 2438
Cdd:PRK14086 262 GPLAAQPAPAP 272
|
|
| PKD_channel |
pfam08016 |
Polycystin cation channel; This family contains the cation channel region from group II of ... |
606-803 |
8.85e-03 |
|
Polycystin cation channel; This family contains the cation channel region from group II of Transient receptor potential (TRP) channels, the TRPP subfamily, including PKD1, PKD2, PKD2L and mucolipin proteins.
Pssm-ID: 462341 [Multi-domain] Cd Length: 225 Bit Score: 40.34 E-value: 8.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 606 LSDFLYYAEFIFLGL---FMSEMFIKmYGLGTRPYFHSSFNCFDCGVIIGSIFEVIWAVIKPG----------------T 666
Cdd:pfam08016 6 RSLFILLCEIVFVVFflyFVVEEILK-IRKHRPSYLRSVWNLLDLAIVILSVVLIVLNIYRDFladrliksveaspvtfI 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 667 SFG------------ISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFnfd 734
Cdd:pfam08016 85 DFDrvaqldnlyriiLAFLVFLTWLKLFKVLRFNKTMSLFTKTLSRAWKDLAGFALMFVIFFFAYAQFGYLLFGTQA--- 161
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 568955985 735 egtppTNFDTFPAAIMTVFQILTG-EDWNEVMYdgiksqggvqGGMVFSI-YFIVLTLFGNYTLLNVFLAI 803
Cdd:pfam08016 162 -----PNFSNFVKSILTLFRTILGdFGYNEIFS----------GNRVLGPlLFLTFVFLVIFILLNLFLAI 217
|
|
| PLN03223 |
PLN03223 |
Polycystin cation channel protein; Provisional |
720-813 |
9.49e-03 |
|
Polycystin cation channel protein; Provisional
Pssm-ID: 215637 [Multi-domain] Cd Length: 1634 Bit Score: 41.47 E-value: 9.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568955985 720 ALLGMQLFGGQFnfdegtppTNFDTFPAAIMTVFQILTGeDWNEVMYDgIKSQGGVQGgMVFSIYFIVLTLFGNYTLLNV 799
Cdd:PLN03223 1345 AFIGHVIFGNAS--------VHFSDMTDSINSLFENLLG-DITYFNED-LKNLTGLQF-VVGMIYFYSYNIFVFMILFNF 1413
|
90
....*....|....*...
gi 568955985 800 FLAIAVDNL----ANAQE 813
Cdd:PLN03223 1414 LLAIICDAFgevkANAAE 1431
|
|
| |
