|
Name |
Accession |
Description |
Interval |
E-value |
| PL48 |
pfam15903 |
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific ... |
31-379 |
0e+00 |
|
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific HL-60 cell differentiation. The N-terminal part of the family is found to induce the formation of filopodia. It is found in vertebrates.
:
Pssm-ID: 464930 Cd Length: 297 Bit Score: 552.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 31 VSRSQSFAGVLGSHERgpRSFTVFSPPGPPRKPLvlSRVSRMFSVAH---PAPKVPQPERLDLVYTALKRGLTAYLEVHQ 107
Cdd:pfam15903 1 ITRSQSFAGFSSAQER--RNLSSFSRPSLRSKPP--SKSSRMFTSSHksgPPPKVPQPERVDRVYEALKKGLKEYLEVHQ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 108 QEQEKLQRQIKESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKidelyeaycvqrrlrdgaynmvraystgspgsrea 187
Cdd:pfam15903 77 AELDKLSRQQKDTKRNSRLGFLYDLDKQIKSVERYIRRLEFHISK----------------------------------- 121
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 188 rdslaeatrghreyteSMCLLENELEAQLGEFHLRMKGLAGFARLCVGDQYEICMKYGRQRWKLRGRIESSGKQVWDSEE 267
Cdd:pfam15903 122 ----------------DMCLLEGELENLLGEFHIKMKGLAGFARLCPGDQYEVLMRYGRQRWKLRGRIETDDKQVWDEEE 185
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 268 TVFLPLLTEFLSIKVTELKGLANHVVVGSVSCETKDLFAALPQVVAVDINDLGTIKLSLEVIWSPFDKDDQPSAASTVNK 347
Cdd:pfam15903 186 MVFLPLIHENFEIKVTELKGLANHVLVGSVTCETKDLFAARPQVVAVDINDLGTIKLQLEVTWNPFDKEDQLPSASSVSK 265
|
330 340 350
....*....|....*....|....*....|..
gi 568957761 348 ASTVTKRFSTYSQSPPDTPSLREQAFYNMLRR 379
Cdd:pfam15903 266 ASVVSRRGSVYSWTPPDTPSFREKYFLSMLRQ 297
|
|
| Herpes_BLLF1 super family |
cl37540 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
495-763 |
1.02e-10 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
The actual alignment was detected with superfamily member pfam05109:
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 66.48 E-value: 1.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 495 PDSTHVER----VSSVLPVLNNGH-SATSPALSTTGPAPtfIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVS 569
Cdd:pfam05109 449 PSSTHVPTnltaPASTGPTVSTADvTSPTPAGTTSGASP--VTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPA 526
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 570 LVNSVPSLTSTTIGSAHTTTPSPLtstgSVPNATdstqaTPSPTHSTPSPTHTTIRLTHTT-----VSPTHSSPSPIHTT 644
Cdd:pfam05109 527 VTTPTPNATSPTLGKTSPTSAVTT----PTPNAT-----SPTPAVTTPTPNATIPTLGKTSptsavTTPTPNATSPTVGE 597
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 645 PSPTHTTVSPTCTTPSSGHSTTSPTQEAkMSTHTTGAVGPVQTTTS-----PISTTESPSPSTdvaiissssaesTGPGT 719
Cdd:pfam05109 598 TSPQANTTNHTLGGTSSTPVVTSPPKNA-TSAVTTGQHNITSSSTSsmslrPSSISETLSPST------------SDNST 664
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 568957761 720 EPLPCSHPASPP----YTKADPTASCTSYQSLASSGSKPLTSPAPDSP 763
Cdd:pfam05109 665 SHMPLLTSAHPTggenITQVTPASTSTHHVSTSSPAPRPGTTSQASGP 712
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1083-1204 |
4.67e-07 |
|
HEAT repeat [General function prediction only];
:
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 50.40 E-value: 4.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 1083 LLVQNLNSDDQAVVLKALRLApeGRLR-KDGLRALSSLLVHGNNKVMAAVStqlrsLSLGPVFRERALLCFLDQLEDGDV 1161
Cdd:COG1413 20 ALIAALADEDPDVRAAAARAL--GRLGdPRAVPALLEALKDPDPEVRAAAA-----EALGRIGDPEAVPALIAALKDEDP 92
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 568957761 1162 QTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQ 1204
Cdd:COG1413 93 EVRRAAAEALGRLGDPAAVPALLEALKDPDWEVRRAAARALGR 135
|
|
| HR1 super family |
cl00087 |
Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small ... |
152-219 |
4.10e-04 |
|
Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases; The HR1 domain, also called the ACC (anti-parallel coiled-coil) finger domain or Rho-binding domain binds small GTPases from the Rho family. It is found in Rho effector proteins including PKC-related kinases such as vertebrate PRK1 (or PKN) and yeast PKC1 protein kinases C, as well as in rhophilins and Rho-associated kinase (ROCK). Rho family members function as molecular switches, cycling between inactive and active forms, controlling a variety of cellular processes. HR1 domains may occur in repeat arrangements (PKN contains three HR1 domains), separated by a short linker region.
The actual alignment was detected with superfamily member cd11636:
Pssm-ID: 469609 Cd Length: 74 Bit Score: 39.96 E-value: 4.10e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568957761 152 KIDELYEAYCVQRRLRDGAYNMVRAYSTGSPGSREArdsLAEATRGHREYTESMCLLENELEAQLGEF 219
Cdd:cd11636 10 RIEELRHHFRVEHAVAEGAKNVLRLLGAGKAQDRKA---ISEAQSKLSESSQKLDLLRVSLEQRLVEL 74
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PL48 |
pfam15903 |
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific ... |
31-379 |
0e+00 |
|
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific HL-60 cell differentiation. The N-terminal part of the family is found to induce the formation of filopodia. It is found in vertebrates.
Pssm-ID: 464930 Cd Length: 297 Bit Score: 552.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 31 VSRSQSFAGVLGSHERgpRSFTVFSPPGPPRKPLvlSRVSRMFSVAH---PAPKVPQPERLDLVYTALKRGLTAYLEVHQ 107
Cdd:pfam15903 1 ITRSQSFAGFSSAQER--RNLSSFSRPSLRSKPP--SKSSRMFTSSHksgPPPKVPQPERVDRVYEALKKGLKEYLEVHQ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 108 QEQEKLQRQIKESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKidelyeaycvqrrlrdgaynmvraystgspgsrea 187
Cdd:pfam15903 77 AELDKLSRQQKDTKRNSRLGFLYDLDKQIKSVERYIRRLEFHISK----------------------------------- 121
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 188 rdslaeatrghreyteSMCLLENELEAQLGEFHLRMKGLAGFARLCVGDQYEICMKYGRQRWKLRGRIESSGKQVWDSEE 267
Cdd:pfam15903 122 ----------------DMCLLEGELENLLGEFHIKMKGLAGFARLCPGDQYEVLMRYGRQRWKLRGRIETDDKQVWDEEE 185
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 268 TVFLPLLTEFLSIKVTELKGLANHVVVGSVSCETKDLFAALPQVVAVDINDLGTIKLSLEVIWSPFDKDDQPSAASTVNK 347
Cdd:pfam15903 186 MVFLPLIHENFEIKVTELKGLANHVLVGSVTCETKDLFAARPQVVAVDINDLGTIKLQLEVTWNPFDKEDQLPSASSVSK 265
|
330 340 350
....*....|....*....|....*....|..
gi 568957761 348 ASTVTKRFSTYSQSPPDTPSLREQAFYNMLRR 379
Cdd:pfam15903 266 ASVVSRRGSVYSWTPPDTPSFREKYFLSMLRQ 297
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
495-763 |
1.02e-10 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 66.48 E-value: 1.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 495 PDSTHVER----VSSVLPVLNNGH-SATSPALSTTGPAPtfIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVS 569
Cdd:pfam05109 449 PSSTHVPTnltaPASTGPTVSTADvTSPTPAGTTSGASP--VTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPA 526
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 570 LVNSVPSLTSTTIGSAHTTTPSPLtstgSVPNATdstqaTPSPTHSTPSPTHTTIRLTHTT-----VSPTHSSPSPIHTT 644
Cdd:pfam05109 527 VTTPTPNATSPTLGKTSPTSAVTT----PTPNAT-----SPTPAVTTPTPNATIPTLGKTSptsavTTPTPNATSPTVGE 597
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 645 PSPTHTTVSPTCTTPSSGHSTTSPTQEAkMSTHTTGAVGPVQTTTS-----PISTTESPSPSTdvaiissssaesTGPGT 719
Cdd:pfam05109 598 TSPQANTTNHTLGGTSSTPVVTSPPKNA-TSAVTTGQHNITSSSTSsmslrPSSISETLSPST------------SDNST 664
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 568957761 720 EPLPCSHPASPP----YTKADPTASCTSYQSLASSGSKPLTSPAPDSP 763
Cdd:pfam05109 665 SHMPLLTSAHPTggenITQVTPASTSTHHVSTSSPAPRPGTTSQASGP 712
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1083-1204 |
4.67e-07 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 50.40 E-value: 4.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 1083 LLVQNLNSDDQAVVLKALRLApeGRLR-KDGLRALSSLLVHGNNKVMAAVStqlrsLSLGPVFRERALLCFLDQLEDGDV 1161
Cdd:COG1413 20 ALIAALADEDPDVRAAAARAL--GRLGdPRAVPALLEALKDPDPEVRAAAA-----EALGRIGDPEAVPALIAALKDEDP 92
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 568957761 1162 QTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQ 1204
Cdd:COG1413 93 EVRRAAAEALGRLGDPAAVPALLEALKDPDWEVRRAAARALGR 135
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
513-723 |
1.73e-06 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 52.06 E-value: 1.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 513 GHSATSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSP 592
Cdd:COG3469 8 ASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 593 LTSTGSVPNATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPTHSSPSPIHTTPSpthttVSPTCTTPSSGHSTTSPTQEA 672
Cdd:COG3469 88 AATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASAT-----SSAGSTTTTTTVSGTETATGG 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 568957761 673 KMSTHTTGAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLP 723
Cdd:COG3469 163 TTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLP 213
|
|
| HR1_PKN1_3 |
cd11636 |
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein ... |
152-219 |
4.10e-04 |
|
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N1; PKN1, also called PKNalpha or Protein-kinase C-related kinase 1 (PRK1), is a serine/threonine protein kinase that is activated by the Rho family of small GTPases, and by fatty acids such as arachidonic and linoleic acids. It is expressed ubiquitously and is the most abundant PKN isoform in neurons. PKN1 is implicated in a variety of functions including cytoskeletal reorganization, cardiac cell survival, cell adhesion, and glucose transport, among others. PKN1 contains three HR1 domains, a C2 domain, and a kinase domain. This model characterizes the third HR1 domain of PKN1. HR1 domains are anti-parallel coiled-coil (ACC) domains that bind small GTPases from the Rho family; PKN1 binds the GTPases RhoA, RhoB, and RhoC, and can also interact weakly with Rac.
Pssm-ID: 212026 Cd Length: 74 Bit Score: 39.96 E-value: 4.10e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568957761 152 KIDELYEAYCVQRRLRDGAYNMVRAYSTGSPGSREArdsLAEATRGHREYTESMCLLENELEAQLGEF 219
Cdd:cd11636 10 RIEELRHHFRVEHAVAEGAKNVLRLLGAGKAQDRKA---ISEAQSKLSESSQKLDLLRVSLEQRLVEL 74
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
655-757 |
5.91e-04 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 42.97 E-value: 5.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 655 TCTTPSSGhSTTSPTQEAKMSTHTTGAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLPCSHPASPPYTK 734
Cdd:PHA03255 25 TSSGSSTA-SAGNVTGTTAVTTPSPSASGPSTNQSTTLTTTSAPITTTAILSTNTTTVTSTGTTVTPVPTTSNASTINVT 103
|
90 100
....*....|....*....|...
gi 568957761 735 ADPTASCTSYQSLASSGSKPLTS 757
Cdd:PHA03255 104 TKVTAQNITATEAGTGTSTGVTS 126
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
1113-1203 |
6.30e-04 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 40.01 E-value: 6.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 1113 LRALSSLLVHGNNKVMAAVSTQlrslSLGPVFRERALLCFLDQLEDGDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTE 1192
Cdd:pfam13646 1 LPALLQALLRDPDPEVRAAAIR----ALGRIGDPEAVPALLELLKDEDPAVRRAAAEALGKIGDPEALPALLELLRDDDD 76
|
90
....*....|..
gi 568957761 1193 A-VREAARQSLQ 1203
Cdd:pfam13646 77 DvVRAAAAEALA 88
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PL48 |
pfam15903 |
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific ... |
31-379 |
0e+00 |
|
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific HL-60 cell differentiation. The N-terminal part of the family is found to induce the formation of filopodia. It is found in vertebrates.
Pssm-ID: 464930 Cd Length: 297 Bit Score: 552.77 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 31 VSRSQSFAGVLGSHERgpRSFTVFSPPGPPRKPLvlSRVSRMFSVAH---PAPKVPQPERLDLVYTALKRGLTAYLEVHQ 107
Cdd:pfam15903 1 ITRSQSFAGFSSAQER--RNLSSFSRPSLRSKPP--SKSSRMFTSSHksgPPPKVPQPERVDRVYEALKKGLKEYLEVHQ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 108 QEQEKLQRQIKESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKidelyeaycvqrrlrdgaynmvraystgspgsrea 187
Cdd:pfam15903 77 AELDKLSRQQKDTKRNSRLGFLYDLDKQIKSVERYIRRLEFHISK----------------------------------- 121
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 188 rdslaeatrghreyteSMCLLENELEAQLGEFHLRMKGLAGFARLCVGDQYEICMKYGRQRWKLRGRIESSGKQVWDSEE 267
Cdd:pfam15903 122 ----------------DMCLLEGELENLLGEFHIKMKGLAGFARLCPGDQYEVLMRYGRQRWKLRGRIETDDKQVWDEEE 185
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 268 TVFLPLLTEFLSIKVTELKGLANHVVVGSVSCETKDLFAALPQVVAVDINDLGTIKLSLEVIWSPFDKDDQPSAASTVNK 347
Cdd:pfam15903 186 MVFLPLIHENFEIKVTELKGLANHVLVGSVTCETKDLFAARPQVVAVDINDLGTIKLQLEVTWNPFDKEDQLPSASSVSK 265
|
330 340 350
....*....|....*....|....*....|..
gi 568957761 348 ASTVTKRFSTYSQSPPDTPSLREQAFYNMLRR 379
Cdd:pfam15903 266 ASVVSRRGSVYSWTPPDTPSFREKYFLSMLRQ 297
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
495-763 |
1.02e-10 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 66.48 E-value: 1.02e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 495 PDSTHVER----VSSVLPVLNNGH-SATSPALSTTGPAPtfIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVS 569
Cdd:pfam05109 449 PSSTHVPTnltaPASTGPTVSTADvTSPTPAGTTSGASP--VTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPA 526
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 570 LVNSVPSLTSTTIGSAHTTTPSPLtstgSVPNATdstqaTPSPTHSTPSPTHTTIRLTHTT-----VSPTHSSPSPIHTT 644
Cdd:pfam05109 527 VTTPTPNATSPTLGKTSPTSAVTT----PTPNAT-----SPTPAVTTPTPNATIPTLGKTSptsavTTPTPNATSPTVGE 597
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 645 PSPTHTTVSPTCTTPSSGHSTTSPTQEAkMSTHTTGAVGPVQTTTS-----PISTTESPSPSTdvaiissssaesTGPGT 719
Cdd:pfam05109 598 TSPQANTTNHTLGGTSSTPVVTSPPKNA-TSAVTTGQHNITSSSTSsmslrPSSISETLSPST------------SDNST 664
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 568957761 720 EPLPCSHPASPP----YTKADPTASCTSYQSLASSGSKPLTSPAPDSP 763
Cdd:pfam05109 665 SHMPLLTSAHPTggenITQVTPASTSTHHVSTSSPAPRPGTTSQASGP 712
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1083-1204 |
4.67e-07 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 50.40 E-value: 4.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 1083 LLVQNLNSDDQAVVLKALRLApeGRLR-KDGLRALSSLLVHGNNKVMAAVStqlrsLSLGPVFRERALLCFLDQLEDGDV 1161
Cdd:COG1413 20 ALIAALADEDPDVRAAAARAL--GRLGdPRAVPALLEALKDPDPEVRAAAA-----EALGRIGDPEAVPALIAALKDEDP 92
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 568957761 1162 QTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQ 1204
Cdd:COG1413 93 EVRRAAAEALGRLGDPAAVPALLEALKDPDWEVRRAAARALGR 135
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
513-723 |
1.73e-06 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 52.06 E-value: 1.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 513 GHSATSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSP 592
Cdd:COG3469 8 ASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 593 LTSTGSVPNATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPTHSSPSPIHTTPSpthttVSPTCTTPSSGHSTTSPTQEA 672
Cdd:COG3469 88 AATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASAT-----SSAGSTTTTTTVSGTETATGG 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 568957761 673 KMSTHTTGAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLP 723
Cdd:COG3469 163 TTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLP 213
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1106-1221 |
2.16e-06 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 48.47 E-value: 2.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 1106 GRLR-KDGLRALSSLLVHGNNKV-MAAVStqlrslSLGPVFRERALLCFLDQLEDGDVQTRVAGCLALGCIKAPEGIEPL 1183
Cdd:COG1413 10 GRLGdPAAVPALIAALADEDPDVrAAAAR------ALGRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGDPEAVPAL 83
|
90 100 110
....*....|....*....|....*....|....*...
gi 568957761 1184 VYLCQTDTEAVREAARQSLQQCGEEgqSAHRQLEESLD 1221
Cdd:COG1413 84 IAALKDEDPEVRRAAAEALGRLGDP--AAVPALLEALK 119
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
454-765 |
4.31e-06 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 50.73 E-value: 4.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 454 HAPYSRTLSH--ISEASVDAALTEAVEAVDSQSPIPG----PSPLVYPDSTHVERVSSVLPVLNNghSATSPALSTTGPA 527
Cdd:pfam17823 90 HTPHGTDLSEpaTREGAADGAASRALAAAASSSPSSAaqslPAAIAALPSEAFSAPRAAACRANA--SAAPRAAIAAASA 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 528 PTFIDPAPTTQldlvhKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSPLTSTGS---VPNATD 604
Cdd:pfam17823 168 PHAASPAPRTA-----ASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNsspAAGTVT 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 605 STQATPSP----THSTPSPTHTTIRLTHTTVSPTHSSPSPIHTtpspthttvSPTCTTPSSGHSTTSPTQEAKMSTHTTG 680
Cdd:pfam17823 243 AAVGTVTPaalaTLAAAAGTVASAAGTINMGDPHARRLSPAKH---------MPSDTMARNPAAPMGAQAQGPIIQVSTD 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 681 AvgPVQTTT-----SPISTTESPSPSTDVAIISSSSAESTGPGTEPlPCSHPASPPYTKADPTASCTSyqslassgskPL 755
Cdd:pfam17823 314 Q--PVHNTAgeptpSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKE-PSASPVPVLHTSMIPEVEATS----------PT 380
|
330
....*....|
gi 568957761 756 TSPAPDSPEQ 765
Cdd:pfam17823 381 TQPSPLLPTQ 390
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
461-704 |
1.14e-05 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 49.37 E-value: 1.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 461 LSHISEASVDAALTEAVEAVDSQSPIPGPSPLVYPDSTHVErVSSVLPVLNNGHSATSPALSTTGPAPTfidpAPTTQLD 540
Cdd:COG3469 1 SSSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATT-VVSTTGSVVVAASGSAGSGTGTTAASS----TAATSST 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 541 LVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAhtttpspLTSTGSVPNATDSTQATPSPTHSTPSPT 620
Cdd:COG3469 76 TSTTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAG-------SVTSTTSSTAGSTTTSGASATSSAGSTT 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 621 HTTIRLTHTTVSPThsspspihttpspthTTVSPTCTTPSSGHSTTSPTqeakmSTHTTGAVGPVQTTTSPISTTESPSP 700
Cdd:COG3469 149 TTTTVSGTETATGG---------------TTTTSTTTTTTSASTTPSAT-----TTATATTASGATTPSATTTATTTGPP 208
|
....
gi 568957761 701 STDV 704
Cdd:COG3469 209 TPGL 212
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
516-797 |
5.24e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 47.26 E-value: 5.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 516 ATSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAP--------SELPSITHTTTSSAYSAV-----SLVNSVPSLTSTTI 582
Cdd:pfam17823 66 APAPVTLTKGTSAAHLNSTEVTAEHTPHGTDLSEPatregaadGAASRALAAAASSSPSSAaqslpAAIAALPSEAFSAP 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 583 GSAHTTTPSPLTSTGSVPNATDSTQATPSPTHSTPSPT--HTTIRLTHTTVSPTHSSPS---PIHTTPSPTHTTVSPTCT 657
Cdd:pfam17823 146 RAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTaaSSTTAASSAPTTAASSAPAtltPARGISTAATATGHPAAG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 658 TPSS--GHSTTSP-TQEAKMSTHTTGAVGPVQT-------------TTSPISTTESPSPSTDVAIISSSSAESTGPGTEp 721
Cdd:pfam17823 226 TALAavGNSSPAAgTVTAAVGTVTPAALATLAAaagtvasaagtinMGDPHARRLSPAKHMPSDTMARNPAAPMGAQAQ- 304
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568957761 722 lpcshpasppytkaDPTASCTSYQSLASSGSKPLTSPAPDSPEQIPKSPSSSPSSSAPEPQHSEHNLAAVAQAPVP 797
Cdd:pfam17823 305 --------------GPIIQVSTDQPVHNTAGEPTPSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASPVPVL 366
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1139-1208 |
7.12e-05 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 43.85 E-value: 7.12e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 1139 SLGPVFRERALLCFLDQLEDGDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQCGEE 1208
Cdd:COG1413 8 ALGRLGDPAAVPALIAALADEDPDVRAAAARALGRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGDP 77
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
407-702 |
7.25e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 46.88 E-value: 7.25e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 407 TARHSTPKPLVQQpepLPVQVAfrRPESLTSGSMDEEPAMTPSLVNGHAPYSRTLShiSEASVDAALTEAVEAVDSQSPI 486
Cdd:pfam17823 117 AAASSSPSSAAQS---LPAAIA--ALPSEAFSAPRAAACRANASAAPRAAIAAASA--PHAASPAPRTAASSTTAASSTT 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 487 PGPSPLVYPDSTHVERVSSVLPVLNNGHSATSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSA-- 564
Cdd:pfam17823 190 AASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAgt 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 565 YSAVSLVNSVPSLTSTTigSAHTTTPSPLTSTGSVPNATDSTQATPSPTHST-PSPTHTTIRLTHTTVSPTHSSPSPIHT 643
Cdd:pfam17823 270 INMGDPHARRLSPAKHM--PSDTMARNPAAPMGAQAQGPIIQVSTDQPVHNTaGEPTPSPSNTTLEPNTPKSVASTNLAV 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568957761 644 TPSPTHTTVSPTCTTPSSGHST-------TSPTQEAKMSTHTTGAVGP--------VQTTTSPISTTESPSPST 702
Cdd:pfam17823 348 VTTTKAQAKEPSASPVPVLHTSmipeveaTSPTTQPSPLLPTQGAAGPgillapeqVATEATAGTASAGPTPRS 421
|
|
| HR1_PKN1_3 |
cd11636 |
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein ... |
152-219 |
4.10e-04 |
|
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N1; PKN1, also called PKNalpha or Protein-kinase C-related kinase 1 (PRK1), is a serine/threonine protein kinase that is activated by the Rho family of small GTPases, and by fatty acids such as arachidonic and linoleic acids. It is expressed ubiquitously and is the most abundant PKN isoform in neurons. PKN1 is implicated in a variety of functions including cytoskeletal reorganization, cardiac cell survival, cell adhesion, and glucose transport, among others. PKN1 contains three HR1 domains, a C2 domain, and a kinase domain. This model characterizes the third HR1 domain of PKN1. HR1 domains are anti-parallel coiled-coil (ACC) domains that bind small GTPases from the Rho family; PKN1 binds the GTPases RhoA, RhoB, and RhoC, and can also interact weakly with Rac.
Pssm-ID: 212026 Cd Length: 74 Bit Score: 39.96 E-value: 4.10e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568957761 152 KIDELYEAYCVQRRLRDGAYNMVRAYSTGSPGSREArdsLAEATRGHREYTESMCLLENELEAQLGEF 219
Cdd:cd11636 10 RIEELRHHFRVEHAVAEGAKNVLRLLGAGKAQDRKA---ISEAQSKLSESSQKLDLLRVSLEQRLVEL 74
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
655-757 |
5.91e-04 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 42.97 E-value: 5.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 655 TCTTPSSGhSTTSPTQEAKMSTHTTGAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLPCSHPASPPYTK 734
Cdd:PHA03255 25 TSSGSSTA-SAGNVTGTTAVTTPSPSASGPSTNQSTTLTTTSAPITTTAILSTNTTTVTSTGTTVTPVPTTSNASTINVT 103
|
90 100
....*....|....*....|...
gi 568957761 735 ADPTASCTSYQSLASSGSKPLTS 757
Cdd:PHA03255 104 TKVTAQNITATEAGTGTSTGVTS 126
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
1113-1203 |
6.30e-04 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 40.01 E-value: 6.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 1113 LRALSSLLVHGNNKVMAAVSTQlrslSLGPVFRERALLCFLDQLEDGDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTE 1192
Cdd:pfam13646 1 LPALLQALLRDPDPEVRAAAIR----ALGRIGDPEAVPALLELLKDEDPAVRRAAAEALGKIGDPEALPALLELLRDDDD 76
|
90
....*....|..
gi 568957761 1193 A-VREAARQSLQ 1203
Cdd:pfam13646 77 DvVRAAAAEALA 88
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
413-798 |
1.61e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 42.83 E-value: 1.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 413 PKPLVQQPEPLPVQVAFRRPESLTSGSMDEEPAM-------------TPSLVNGHAPYSRTLShiSEASVDAALTEAvea 479
Cdd:pfam03154 65 SSKKIKEEAPSPLKSAKRQREKGASDTEEPERATakksktqeisrpnSPSEGEGESSDGRSVN--DEGSSDPKDIDQ--- 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 480 vDSQSPIPG-PSPL---VYPDSTHVERVSSVLPVLNNGHSATSPALSTTGPAPTFI-DPAPTTQLDLVHKTTDSAPSELP 554
Cdd:pfam03154 140 -DNRSTSPSiPSPQdneSDSDSSAQQQILQTQPPVLQAQSGAASPPSPPPPGTTQAaTAGPTPSAPSVPPQGSPATSQPP 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 555 SITHTTTSSaysaVSLVNSVPSLTSTTIGSAHTTTPSPLTSTgsvPNATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPT 634
Cdd:pfam03154 219 NQTQSTAAP----HTLIQQTPTLHPQRLPSPHPPLQPMTQPP---PPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQH 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 635 HSSPSPIHTTPSPTHTTVSPTCTTPSSGHSTTSPTQEAKMSTHTTGAVGPVQT--------------TTSPISTTESPSP 700
Cdd:pfam03154 292 PVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQPlppaplsmphikppPTTPIPQLPNPQS 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 701 STDVAIISSSSAESTGPGTEPLPCSHPASPPYTKADPTASCTSYQSLasSGSKPLTSPaPDSPEQIPKSPSSSPSSSAPE 780
Cdd:pfam03154 372 HKHPPHLSGPSPFQMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLM--PQSQQLPPP-PAQPPVLTQSQSLPPPAASHP 448
|
410
....*....|....*...
gi 568957761 781 PQHSEHNLAavAQAPVPE 798
Cdd:pfam03154 449 PTSGLHQVP--SQSPFPQ 464
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
427-764 |
3.50e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 41.70 E-value: 3.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 427 VAFRRPESLTSGSMDEEPAMTPSLVNGHAPYSRTLSHISEASVDAALTEAVEAVDSQSPIPGPSPLVYPDSTHVERVSSV 506
Cdd:PHA03307 55 VVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 507 LPVLNNGHSATSPALSTTGPAPtfiDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSlVNSVPSLTSTTIGSAH 586
Cdd:PHA03307 135 SEMLRPVGSPGPPPAASPPAAG---ASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPP-PSTPPAAASPRPPRRS 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 587 TTTPSPLTSTGSVP--NATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPTHSSPSPIHTTPSPTHTTVSPTCTTPSSGHS 664
Cdd:PHA03307 211 SPISASASSPAPAPgrSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 665 TTSPTQEAKMSThttgAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLP-CSHPASPPYTKADPTASCTS 743
Cdd:PHA03307 291 PRERSPSPSPSS----PGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPsPSRSPSPSRPPPPADPSSPR 366
|
330 340
....*....|....*....|.
gi 568957761 744 yQSLASSGSKPLTSPAPDSPE 764
Cdd:PHA03307 367 -KRPRPSRAPSSPAASAGRPT 386
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
471-668 |
3.69e-03 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 41.28 E-value: 3.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 471 AALTEAVEAVDSQSPIPGPSPLVYPDSTHVERVSSVLPVLNNGHSATSPALSTTGPAPTFIDPAPTTqldlvhkTTDSAP 550
Cdd:COG3469 30 ASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATSTSATL-------VATSTA 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 551 SELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSPLTSTGSVPNATDSTQATPSPTHSTPSPTHTTirlthtT 630
Cdd:COG3469 103 SGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGTTTTSTTTTTTSA------S 176
|
170 180 190
....*....|....*....|....*....|....*...
gi 568957761 631 VSPTHSSPSPIHTTPSPTHTTVSPTcTTPSSGHSTTSP 668
Cdd:COG3469 177 TTPSATTTATATTASGATTPSATTT-ATTTGPPTPGLP 213
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
613-765 |
3.73e-03 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 40.66 E-value: 3.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 613 THSTPSPTHTTIRLTHTTVS-PTHSSPSPIHTTPSPTHTTVSPTCTTPSSGHSTTSPTqeakmsthTTGAVGPVQTTTSP 691
Cdd:PHA03255 25 TSSGSSTASAGNVTGTTAVTtPSPSASGPSTNQSTTLTTTSAPITTTAILSTNTTTVT--------STGTTVTPVPTTSN 96
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568957761 692 ISTtesPSPSTDVAIISSSSAEsTGPGTEPLPCSHPAsppyTKADPTASCTSYQSLASSGSKPLTSPAPDSPEQ 765
Cdd:PHA03255 97 AST---INVTTKVTAQNITATE-AGTGTSTGVTSNVT----TRSSSTTSATTRITNATTLAPTLSSKGTSNATK 162
|
|
| Metaviral_G |
pfam09595 |
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. ... |
601-749 |
4.67e-03 |
|
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. It is high in serine and threonine suggesting it is highly glycosylated.
Pssm-ID: 462833 [Multi-domain] Cd Length: 183 Bit Score: 39.55 E-value: 4.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 601 NATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPTHSSPSPiHTTPSPTHTTVSPTCTTPSSGHSTTSPTQEAKMSTHTTG 680
Cdd:pfam09595 46 IITDIIDININKQHPEQEHHENPPLNEAAKEAPSESEDAP-DIDPNNQHPSQDRSEAPPLEPAAKTKPSEHEPANPPDAS 124
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568957761 681 AvgpvqTTTSPISTTESPSPSTdvaiisSSSAESTGPGTEPLPCSHPASPPYTKADPTASCTSYQSLAS 749
Cdd:pfam09595 125 N-----RLSPPDASTAAIREAR------TFRKPSTGKRNNPSSAQSDQSPPRANHEAIGRANPFAMSST 182
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
517-702 |
5.11e-03 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 39.89 E-value: 5.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 517 TSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAysavslvnsvpsLTSTTIGSAHTTTPSPLtst 596
Cdd:PHA03255 20 TSLIWTSSGSSTASAGNVTGTTAVTTPSPSASGPSTNQSTTLTTTSAP------------ITTTAILSTNTTTVTST--- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 597 gsvpnatdSTQATPSPTHSTPSPTHTTIRLTHTTVSPThsspspihttpspthttvsptcttpSSGHSTTSPTQE--AKM 674
Cdd:PHA03255 85 --------GTTVTPVPTTSNASTINVTTKVTAQNITAT-------------------------EAGTGTSTGVTSnvTTR 131
|
170 180
....*....|....*....|....*...
gi 568957761 675 STHTTGAvgpvqTTTSPISTTESPSPST 702
Cdd:PHA03255 132 SSSTTSA-----TTRITNATTLAPTLSS 154
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
1156-1221 |
5.16e-03 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 37.32 E-value: 5.16e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568957761 1156 LEDGDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQCGEEGQSAHrqLEESLD 1221
Cdd:pfam13646 9 LRDPDPEVRAAAIRALGRIGDPEAVPALLELLKDEDPAVRRAAAEALGKIGDPEALPA--LLELLR 72
|
|
| COG4935 |
COG4935 |
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ... |
447-704 |
9.88e-03 |
|
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443962 [Multi-domain] Cd Length: 641 Bit Score: 40.19 E-value: 9.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 447 TPSLVNGHAPYSRTLSHISEASVDAALTEAVEAVDSQSPIPGPSPLVYPDSTHVERVSSVLPVLNNGHSATSPALSTTGP 526
Cdd:COG4935 281 GAGVVGAAAGGGDAALGGAVGAAGTGNAAAAAAASAGSGGGGGSAAAAGAAAAAAAAAAGAAAGVSGAASVVAGASGGGA 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 527 APTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSPLTSTGSVPNATDST 606
Cdd:COG4935 361 GTAAAAGGGAAAAAAGGAAAAGAAAGAAAGAAAGAAAAGGVASAAGAVGAGTAAGASATAAVSTGAASGSSTTSSTGTTA 440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957761 607 QATPSPTHSTPSPTHTTIRLTHTTVSPThssPSPIHTTPSPTHTTVSPTCTTPSSGHSTTSPTQEAKMSTHTTGAVGPVQ 686
Cdd:COG4935 441 TATGLGGGADAGSTSTGTGSAAGAAGGT---TTATSGLASSTTAAAAAAAAGLATTAAVAAGAAGAAAAAATAASVGGAT 517
|
250
....*....|....*...
gi 568957761 687 TTTSPISTTESPSPSTDV 704
Cdd:COG4935 518 GAAGTTNSTATFSNTTDV 535
|
|
| |
