|
Name |
Accession |
Description |
Interval |
E-value |
| PL48 |
pfam15903 |
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific ... |
2-331 |
0e+00 |
|
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific HL-60 cell differentiation. The N-terminal part of the family is found to induce the formation of filopodia. It is found in vertebrates.
:
Pssm-ID: 464930 Cd Length: 297 Bit Score: 531.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 2 SFTVFSPPGPPRKPLvlSRVSRMFSVAH---PAPKVPQPERLDLVYTALKRGLTAYLEVHQQEQEKLQRQIKESKRNSRL 78
Cdd:pfam15903 18 NLSSFSRPSLRSKPP--SKSSRMFTSSHksgPPPKVPQPERVDRVYEALKKGLKEYLEVHQAELDKLSRQQKDTKRNSRL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 79 GFLYDLDKQVKSIERFLRRLEFHASKidelyeaycvqrrlrdgaynmvraystgspgsreardslaeatrghreyteSMC 158
Cdd:pfam15903 96 GFLYDLDKQIKSVERYIRRLEFHISK---------------------------------------------------DMC 124
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 159 LLENELEAQLGEFHLRMKGLAGFARLCVGDQYEICMKYGRQRWKLRGRIESSGKQVWDSEETVFLPLLTEFLSIKVTELK 238
Cdd:pfam15903 125 LLEGELENLLGEFHIKMKGLAGFARLCPGDQYEVLMRYGRQRWKLRGRIETDDKQVWDEEEMVFLPLIHENFEIKVTELK 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 239 GLANHVVVGSVSCETKDLFAALPQVVAVDINDLGTIKLSLEVIWSPFDKDDQPSAASTVNKASTVTKRFSTYSQSPPDTP 318
Cdd:pfam15903 205 GLANHVLVGSVTCETKDLFAARPQVVAVDINDLGTIKLQLEVTWNPFDKEDQLPSASSVSKASVVSRRGSVYSWTPPDTP 284
|
330
....*....|...
gi 568957765 319 SLREQAFYNMLRR 331
Cdd:pfam15903 285 SFREKYFLSMLRQ 297
|
|
| Herpes_BLLF1 super family |
cl37540 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
447-715 |
1.49e-10 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
The actual alignment was detected with superfamily member pfam05109:
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 65.71 E-value: 1.49e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 447 PDSTHVER----VSSVLPVLNNGH-SATSPALSTTGPAPtfIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVS 521
Cdd:pfam05109 449 PSSTHVPTnltaPASTGPTVSTADvTSPTPAGTTSGASP--VTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPA 526
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 522 LVNSVPSLTSTTIGSAHTTTPSPLtstgSVPNATdstqaTPSPTHSTPSPTHTTIRLTHTT-----VSPTHSSPSPIHTT 596
Cdd:pfam05109 527 VTTPTPNATSPTLGKTSPTSAVTT----PTPNAT-----SPTPAVTTPTPNATIPTLGKTSptsavTTPTPNATSPTVGE 597
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 597 PSPTHTTVSPTCTTPSSGHSTTSPTQEAkMSTHTTGAVGPVQTTTS-----PISTTESPSPSTdvaiissssaesTGPGT 671
Cdd:pfam05109 598 TSPQANTTNHTLGGTSSTPVVTSPPKNA-TSAVTTGQHNITSSSTSsmslrPSSISETLSPST------------SDNST 664
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 568957765 672 EPLPCSHPASPP----YTKADPTASCTSYQSLASSGSKPLTSPAPDSP 715
Cdd:pfam05109 665 SHMPLLTSAHPTggenITQVTPASTSTHHVSTSSPAPRPGTTSQASGP 712
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1035-1156 |
4.03e-07 |
|
HEAT repeat [General function prediction only];
:
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 50.40 E-value: 4.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 1035 LLVQNLNSDDQAVVLKALRLApeGRLR-KDGLRALSSLLVHGNNKVMAAVStqlrsLSLGPVFRERALLCFLDQLEDGDV 1113
Cdd:COG1413 20 ALIAALADEDPDVRAAAARAL--GRLGdPRAVPALLEALKDPDPEVRAAAA-----EALGRIGDPEAVPALIAALKDEDP 92
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 568957765 1114 QTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQ 1156
Cdd:COG1413 93 EVRRAAAEALGRLGDPAAVPALLEALKDPDWEVRRAAARALGR 135
|
|
| HR1 super family |
cl00087 |
Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small ... |
104-171 |
3.57e-04 |
|
Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases; The HR1 domain, also called the ACC (anti-parallel coiled-coil) finger domain or Rho-binding domain binds small GTPases from the Rho family. It is found in Rho effector proteins including PKC-related kinases such as vertebrate PRK1 (or PKN) and yeast PKC1 protein kinases C, as well as in rhophilins and Rho-associated kinase (ROCK). Rho family members function as molecular switches, cycling between inactive and active forms, controlling a variety of cellular processes. HR1 domains may occur in repeat arrangements (PKN contains three HR1 domains), separated by a short linker region.
The actual alignment was detected with superfamily member cd11636:
Pssm-ID: 469609 Cd Length: 74 Bit Score: 40.34 E-value: 3.57e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568957765 104 KIDELYEAYCVQRRLRDGAYNMVRAYSTGSPGSREArdsLAEATRGHREYTESMCLLENELEAQLGEF 171
Cdd:cd11636 10 RIEELRHHFRVEHAVAEGAKNVLRLLGAGKAQDRKA---ISEAQSKLSESSQKLDLLRVSLEQRLVEL 74
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PL48 |
pfam15903 |
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific ... |
2-331 |
0e+00 |
|
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific HL-60 cell differentiation. The N-terminal part of the family is found to induce the formation of filopodia. It is found in vertebrates.
Pssm-ID: 464930 Cd Length: 297 Bit Score: 531.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 2 SFTVFSPPGPPRKPLvlSRVSRMFSVAH---PAPKVPQPERLDLVYTALKRGLTAYLEVHQQEQEKLQRQIKESKRNSRL 78
Cdd:pfam15903 18 NLSSFSRPSLRSKPP--SKSSRMFTSSHksgPPPKVPQPERVDRVYEALKKGLKEYLEVHQAELDKLSRQQKDTKRNSRL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 79 GFLYDLDKQVKSIERFLRRLEFHASKidelyeaycvqrrlrdgaynmvraystgspgsreardslaeatrghreyteSMC 158
Cdd:pfam15903 96 GFLYDLDKQIKSVERYIRRLEFHISK---------------------------------------------------DMC 124
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 159 LLENELEAQLGEFHLRMKGLAGFARLCVGDQYEICMKYGRQRWKLRGRIESSGKQVWDSEETVFLPLLTEFLSIKVTELK 238
Cdd:pfam15903 125 LLEGELENLLGEFHIKMKGLAGFARLCPGDQYEVLMRYGRQRWKLRGRIETDDKQVWDEEEMVFLPLIHENFEIKVTELK 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 239 GLANHVVVGSVSCETKDLFAALPQVVAVDINDLGTIKLSLEVIWSPFDKDDQPSAASTVNKASTVTKRFSTYSQSPPDTP 318
Cdd:pfam15903 205 GLANHVLVGSVTCETKDLFAARPQVVAVDINDLGTIKLQLEVTWNPFDKEDQLPSASSVSKASVVSRRGSVYSWTPPDTP 284
|
330
....*....|...
gi 568957765 319 SLREQAFYNMLRR 331
Cdd:pfam15903 285 SFREKYFLSMLRQ 297
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
447-715 |
1.49e-10 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 65.71 E-value: 1.49e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 447 PDSTHVER----VSSVLPVLNNGH-SATSPALSTTGPAPtfIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVS 521
Cdd:pfam05109 449 PSSTHVPTnltaPASTGPTVSTADvTSPTPAGTTSGASP--VTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPA 526
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 522 LVNSVPSLTSTTIGSAHTTTPSPLtstgSVPNATdstqaTPSPTHSTPSPTHTTIRLTHTT-----VSPTHSSPSPIHTT 596
Cdd:pfam05109 527 VTTPTPNATSPTLGKTSPTSAVTT----PTPNAT-----SPTPAVTTPTPNATIPTLGKTSptsavTTPTPNATSPTVGE 597
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 597 PSPTHTTVSPTCTTPSSGHSTTSPTQEAkMSTHTTGAVGPVQTTTS-----PISTTESPSPSTdvaiissssaesTGPGT 671
Cdd:pfam05109 598 TSPQANTTNHTLGGTSSTPVVTSPPKNA-TSAVTTGQHNITSSSTSsmslrPSSISETLSPST------------SDNST 664
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 568957765 672 EPLPCSHPASPP----YTKADPTASCTSYQSLASSGSKPLTSPAPDSP 715
Cdd:pfam05109 665 SHMPLLTSAHPTggenITQVTPASTSTHHVSTSSPAPRPGTTSQASGP 712
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1035-1156 |
4.03e-07 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 50.40 E-value: 4.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 1035 LLVQNLNSDDQAVVLKALRLApeGRLR-KDGLRALSSLLVHGNNKVMAAVStqlrsLSLGPVFRERALLCFLDQLEDGDV 1113
Cdd:COG1413 20 ALIAALADEDPDVRAAAARAL--GRLGdPRAVPALLEALKDPDPEVRAAAA-----EALGRIGDPEAVPALIAALKDEDP 92
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 568957765 1114 QTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQ 1156
Cdd:COG1413 93 EVRRAAAEALGRLGDPAAVPALLEALKDPDWEVRRAAARALGR 135
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
465-675 |
1.78e-06 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 52.06 E-value: 1.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 465 GHSATSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSP 544
Cdd:COG3469 8 ASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 545 LTSTGSVPNATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPTHSSPSPIHTTPSpthttVSPTCTTPSSGHSTTSPTQEA 624
Cdd:COG3469 88 AATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASAT-----SSAGSTTTTTTVSGTETATGG 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 568957765 625 KMSTHTTGAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLP 675
Cdd:COG3469 163 TTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLP 213
|
|
| HR1_PKN1_3 |
cd11636 |
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein ... |
104-171 |
3.57e-04 |
|
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N1; PKN1, also called PKNalpha or Protein-kinase C-related kinase 1 (PRK1), is a serine/threonine protein kinase that is activated by the Rho family of small GTPases, and by fatty acids such as arachidonic and linoleic acids. It is expressed ubiquitously and is the most abundant PKN isoform in neurons. PKN1 is implicated in a variety of functions including cytoskeletal reorganization, cardiac cell survival, cell adhesion, and glucose transport, among others. PKN1 contains three HR1 domains, a C2 domain, and a kinase domain. This model characterizes the third HR1 domain of PKN1. HR1 domains are anti-parallel coiled-coil (ACC) domains that bind small GTPases from the Rho family; PKN1 binds the GTPases RhoA, RhoB, and RhoC, and can also interact weakly with Rac.
Pssm-ID: 212026 Cd Length: 74 Bit Score: 40.34 E-value: 3.57e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568957765 104 KIDELYEAYCVQRRLRDGAYNMVRAYSTGSPGSREArdsLAEATRGHREYTESMCLLENELEAQLGEF 171
Cdd:cd11636 10 RIEELRHHFRVEHAVAEGAKNVLRLLGAGKAQDRKA---ISEAQSKLSESSQKLDLLRVSLEQRLVEL 74
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
1065-1155 |
5.43e-04 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 40.01 E-value: 5.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 1065 LRALSSLLVHGNNKVMAAVSTQlrslSLGPVFRERALLCFLDQLEDGDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTE 1144
Cdd:pfam13646 1 LPALLQALLRDPDPEVRAAAIR----ALGRIGDPEAVPALLELLKDEDPAVRRAAAEALGKIGDPEALPALLELLRDDDD 76
|
90
....*....|..
gi 568957765 1145 A-VREAARQSLQ 1155
Cdd:pfam13646 77 DvVRAAAAEALA 88
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
607-709 |
6.25e-04 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 42.97 E-value: 6.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 607 TCTTPSSGhSTTSPTQEAKMSTHTTGAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLPCSHPASPPYTK 686
Cdd:PHA03255 25 TSSGSSTA-SAGNVTGTTAVTTPSPSASGPSTNQSTTLTTTSAPITTTAILSTNTTTVTSTGTTVTPVPTTSNASTINVT 103
|
90 100
....*....|....*....|...
gi 568957765 687 ADPTASCTSYQSLASSGSKPLTS 709
Cdd:PHA03255 104 TKVTAQNITATEAGTGTSTGVTS 126
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PL48 |
pfam15903 |
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific ... |
2-331 |
0e+00 |
|
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific HL-60 cell differentiation. The N-terminal part of the family is found to induce the formation of filopodia. It is found in vertebrates.
Pssm-ID: 464930 Cd Length: 297 Bit Score: 531.97 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 2 SFTVFSPPGPPRKPLvlSRVSRMFSVAH---PAPKVPQPERLDLVYTALKRGLTAYLEVHQQEQEKLQRQIKESKRNSRL 78
Cdd:pfam15903 18 NLSSFSRPSLRSKPP--SKSSRMFTSSHksgPPPKVPQPERVDRVYEALKKGLKEYLEVHQAELDKLSRQQKDTKRNSRL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 79 GFLYDLDKQVKSIERFLRRLEFHASKidelyeaycvqrrlrdgaynmvraystgspgsreardslaeatrghreyteSMC 158
Cdd:pfam15903 96 GFLYDLDKQIKSVERYIRRLEFHISK---------------------------------------------------DMC 124
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 159 LLENELEAQLGEFHLRMKGLAGFARLCVGDQYEICMKYGRQRWKLRGRIESSGKQVWDSEETVFLPLLTEFLSIKVTELK 238
Cdd:pfam15903 125 LLEGELENLLGEFHIKMKGLAGFARLCPGDQYEVLMRYGRQRWKLRGRIETDDKQVWDEEEMVFLPLIHENFEIKVTELK 204
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 239 GLANHVVVGSVSCETKDLFAALPQVVAVDINDLGTIKLSLEVIWSPFDKDDQPSAASTVNKASTVTKRFSTYSQSPPDTP 318
Cdd:pfam15903 205 GLANHVLVGSVTCETKDLFAARPQVVAVDINDLGTIKLQLEVTWNPFDKEDQLPSASSVSKASVVSRRGSVYSWTPPDTP 284
|
330
....*....|...
gi 568957765 319 SLREQAFYNMLRR 331
Cdd:pfam15903 285 SFREKYFLSMLRQ 297
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
447-715 |
1.49e-10 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 65.71 E-value: 1.49e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 447 PDSTHVER----VSSVLPVLNNGH-SATSPALSTTGPAPtfIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVS 521
Cdd:pfam05109 449 PSSTHVPTnltaPASTGPTVSTADvTSPTPAGTTSGASP--VTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPA 526
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 522 LVNSVPSLTSTTIGSAHTTTPSPLtstgSVPNATdstqaTPSPTHSTPSPTHTTIRLTHTT-----VSPTHSSPSPIHTT 596
Cdd:pfam05109 527 VTTPTPNATSPTLGKTSPTSAVTT----PTPNAT-----SPTPAVTTPTPNATIPTLGKTSptsavTTPTPNATSPTVGE 597
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 597 PSPTHTTVSPTCTTPSSGHSTTSPTQEAkMSTHTTGAVGPVQTTTS-----PISTTESPSPSTdvaiissssaesTGPGT 671
Cdd:pfam05109 598 TSPQANTTNHTLGGTSSTPVVTSPPKNA-TSAVTTGQHNITSSSTSsmslrPSSISETLSPST------------SDNST 664
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 568957765 672 EPLPCSHPASPP----YTKADPTASCTSYQSLASSGSKPLTSPAPDSP 715
Cdd:pfam05109 665 SHMPLLTSAHPTggenITQVTPASTSTHHVSTSSPAPRPGTTSQASGP 712
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1035-1156 |
4.03e-07 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 50.40 E-value: 4.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 1035 LLVQNLNSDDQAVVLKALRLApeGRLR-KDGLRALSSLLVHGNNKVMAAVStqlrsLSLGPVFRERALLCFLDQLEDGDV 1113
Cdd:COG1413 20 ALIAALADEDPDVRAAAARAL--GRLGdPRAVPALLEALKDPDPEVRAAAA-----EALGRIGDPEAVPALIAALKDEDP 92
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 568957765 1114 QTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQ 1156
Cdd:COG1413 93 EVRRAAAEALGRLGDPAAVPALLEALKDPDWEVRRAAARALGR 135
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
465-675 |
1.78e-06 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 52.06 E-value: 1.78e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 465 GHSATSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSP 544
Cdd:COG3469 8 ASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 545 LTSTGSVPNATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPTHSSPSPIHTTPSpthttVSPTCTTPSSGHSTTSPTQEA 624
Cdd:COG3469 88 AATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASAT-----SSAGSTTTTTTVSGTETATGG 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 568957765 625 KMSTHTTGAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLP 675
Cdd:COG3469 163 TTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLP 213
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1058-1173 |
1.84e-06 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 48.47 E-value: 1.84e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 1058 GRLR-KDGLRALSSLLVHGNNKV-MAAVStqlrslSLGPVFRERALLCFLDQLEDGDVQTRVAGCLALGCIKAPEGIEPL 1135
Cdd:COG1413 10 GRLGdPAAVPALIAALADEDPDVrAAAAR------ALGRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGDPEAVPAL 83
|
90 100 110
....*....|....*....|....*....|....*...
gi 568957765 1136 VYLCQTDTEAVREAARQSLQQCGEEgqSAHRQLEESLD 1173
Cdd:COG1413 84 IAALKDEDPEVRRAAAEALGRLGDP--AAVPALLEALK 119
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
406-717 |
4.33e-06 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 50.73 E-value: 4.33e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 406 HAPYSRTLSH--ISEASVDAALTEAVEAVDSQSPIPG----PSPLVYPDSTHVERVSSVLPVLNNghSATSPALSTTGPA 479
Cdd:pfam17823 90 HTPHGTDLSEpaTREGAADGAASRALAAAASSSPSSAaqslPAAIAALPSEAFSAPRAAACRANA--SAAPRAAIAAASA 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 480 PTFIDPAPTTQldlvhKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSPLTSTGS---VPNATD 556
Cdd:pfam17823 168 PHAASPAPRTA-----ASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNsspAAGTVT 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 557 STQATPSP----THSTPSPTHTTIRLTHTTVSPTHSSPSPIHTtpspthttvSPTCTTPSSGHSTTSPTQEAKMSTHTTG 632
Cdd:pfam17823 243 AAVGTVTPaalaTLAAAAGTVASAAGTINMGDPHARRLSPAKH---------MPSDTMARNPAAPMGAQAQGPIIQVSTD 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 633 AvgPVQTTT-----SPISTTESPSPSTDVAIISSSSAESTGPGTEPlPCSHPASPPYTKADPTASCTSyqslassgskPL 707
Cdd:pfam17823 314 Q--PVHNTAgeptpSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKE-PSASPVPVLHTSMIPEVEATS----------PT 380
|
330
....*....|
gi 568957765 708 TSPAPDSPEQ 717
Cdd:pfam17823 381 TQPSPLLPTQ 390
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
413-656 |
1.22e-05 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 49.37 E-value: 1.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 413 LSHISEASVDAALTEAVEAVDSQSPIPGPSPLVYPDSTHVErVSSVLPVLNNGHSATSPALSTTGPAPTfidpAPTTQLD 492
Cdd:COG3469 1 SSSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATT-VVSTTGSVVVAASGSAGSGTGTTAASS----TAATSST 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 493 LVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAhtttpspLTSTGSVPNATDSTQATPSPTHSTPSPT 572
Cdd:COG3469 76 TSTTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAG-------SVTSTTSSTAGSTTTSGASATSSAGSTT 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 573 HTTIRLTHTTVSPThsspspihttpspthTTVSPTCTTPSSGHSTTSPTqeakmSTHTTGAVGPVQTTTSPISTTESPSP 652
Cdd:COG3469 149 TTTTVSGTETATGG---------------TTTTSTTTTTTSASTTPSAT-----TTATATTASGATTPSATTTATTTGPP 208
|
....
gi 568957765 653 STDV 656
Cdd:COG3469 209 TPGL 212
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
468-749 |
5.59e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 47.26 E-value: 5.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 468 ATSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAP--------SELPSITHTTTSSAYSAV-----SLVNSVPSLTSTTI 534
Cdd:pfam17823 66 APAPVTLTKGTSAAHLNSTEVTAEHTPHGTDLSEPatregaadGAASRALAAAASSSPSSAaqslpAAIAALPSEAFSAP 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 535 GSAHTTTPSPLTSTGSVPNATDSTQATPSPTHSTPSPT--HTTIRLTHTTVSPTHSSPS---PIHTTPSPTHTTVSPTCT 609
Cdd:pfam17823 146 RAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTaaSSTTAASSAPTTAASSAPAtltPARGISTAATATGHPAAG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 610 TPSS--GHSTTSP-TQEAKMSTHTTGAVGPVQT-------------TTSPISTTESPSPSTDVAIISSSSAESTGPGTEp 673
Cdd:pfam17823 226 TALAavGNSSPAAgTVTAAVGTVTPAALATLAAaagtvasaagtinMGDPHARRLSPAKHMPSDTMARNPAAPMGAQAQ- 304
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568957765 674 lpcshpasppytkaDPTASCTSYQSLASSGSKPLTSPAPDSPEQIPKSPSSSPSSSAPEPQHSEHNLAAVAQAPVP 749
Cdd:pfam17823 305 --------------GPIIQVSTDQPVHNTAGEPTPSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASPVPVL 366
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1091-1160 |
6.15e-05 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 44.23 E-value: 6.15e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 1091 SLGPVFRERALLCFLDQLEDGDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQCGEE 1160
Cdd:COG1413 8 ALGRLGDPAAVPALIAALADEDPDVRAAAARALGRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGDP 77
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
359-654 |
7.88e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 46.88 E-value: 7.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 359 TARHSTPKPLVQQpepLPVQVAfrRPESLTSGSMDEEPAMTPSLVNGHAPYSRTLShiSEASVDAALTEAVEAVDSQSPI 438
Cdd:pfam17823 117 AAASSSPSSAAQS---LPAAIA--ALPSEAFSAPRAAACRANASAAPRAAIAAASA--PHAASPAPRTAASSTTAASSTT 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 439 PGPSPLVYPDSTHVERVSSVLPVLNNGHSATSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSA-- 516
Cdd:pfam17823 190 AASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAgt 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 517 YSAVSLVNSVPSLTSTTigSAHTTTPSPLTSTGSVPNATDSTQATPSPTHST-PSPTHTTIRLTHTTVSPTHSSPSPIHT 595
Cdd:pfam17823 270 INMGDPHARRLSPAKHM--PSDTMARNPAAPMGAQAQGPIIQVSTDQPVHNTaGEPTPSPSNTTLEPNTPKSVASTNLAV 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568957765 596 TPSPTHTTVSPTCTTPSSGHST-------TSPTQEAKMSTHTTGAVGP--------VQTTTSPISTTESPSPST 654
Cdd:pfam17823 348 VTTTKAQAKEPSASPVPVLHTSmipeveaTSPTTQPSPLLPTQGAAGPgillapeqVATEATAGTASAGPTPRS 421
|
|
| HR1_PKN1_3 |
cd11636 |
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein ... |
104-171 |
3.57e-04 |
|
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N1; PKN1, also called PKNalpha or Protein-kinase C-related kinase 1 (PRK1), is a serine/threonine protein kinase that is activated by the Rho family of small GTPases, and by fatty acids such as arachidonic and linoleic acids. It is expressed ubiquitously and is the most abundant PKN isoform in neurons. PKN1 is implicated in a variety of functions including cytoskeletal reorganization, cardiac cell survival, cell adhesion, and glucose transport, among others. PKN1 contains three HR1 domains, a C2 domain, and a kinase domain. This model characterizes the third HR1 domain of PKN1. HR1 domains are anti-parallel coiled-coil (ACC) domains that bind small GTPases from the Rho family; PKN1 binds the GTPases RhoA, RhoB, and RhoC, and can also interact weakly with Rac.
Pssm-ID: 212026 Cd Length: 74 Bit Score: 40.34 E-value: 3.57e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 568957765 104 KIDELYEAYCVQRRLRDGAYNMVRAYSTGSPGSREArdsLAEATRGHREYTESMCLLENELEAQLGEF 171
Cdd:cd11636 10 RIEELRHHFRVEHAVAEGAKNVLRLLGAGKAQDRKA---ISEAQSKLSESSQKLDLLRVSLEQRLVEL 74
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
1065-1155 |
5.43e-04 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 40.01 E-value: 5.43e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 1065 LRALSSLLVHGNNKVMAAVSTQlrslSLGPVFRERALLCFLDQLEDGDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTE 1144
Cdd:pfam13646 1 LPALLQALLRDPDPEVRAAAIR----ALGRIGDPEAVPALLELLKDEDPAVRRAAAEALGKIGDPEALPALLELLRDDDD 76
|
90
....*....|..
gi 568957765 1145 A-VREAARQSLQ 1155
Cdd:pfam13646 77 DvVRAAAAEALA 88
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
607-709 |
6.25e-04 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 42.97 E-value: 6.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 607 TCTTPSSGhSTTSPTQEAKMSTHTTGAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLPCSHPASPPYTK 686
Cdd:PHA03255 25 TSSGSSTA-SAGNVTGTTAVTTPSPSASGPSTNQSTTLTTTSAPITTTAILSTNTTTVTSTGTTVTPVPTTSNASTINVT 103
|
90 100
....*....|....*....|...
gi 568957765 687 ADPTASCTSYQSLASSGSKPLTS 709
Cdd:PHA03255 104 TKVTAQNITATEAGTGTSTGVTS 126
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
365-750 |
1.24e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 43.22 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 365 PKPLVQQPEPLPVQVAFRRPESLTSGSMDEEPAM-------------TPSLVNGHAPYSRTLShiSEASVDAALTEAvea 431
Cdd:pfam03154 65 SSKKIKEEAPSPLKSAKRQREKGASDTEEPERATakksktqeisrpnSPSEGEGESSDGRSVN--DEGSSDPKDIDQ--- 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 432 vDSQSPIPG-PSPL---VYPDSTHVERVSSVLPVLNNGHSATSPALSTTGPAPTFI-DPAPTTQLDLVHKTTDSAPSELP 506
Cdd:pfam03154 140 -DNRSTSPSiPSPQdneSDSDSSAQQQILQTQPPVLQAQSGAASPPSPPPPGTTQAaTAGPTPSAPSVPPQGSPATSQPP 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 507 SITHTTTSSaysaVSLVNSVPSLTSTTIGSAHTTTPSPLTSTgsvPNATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPT 586
Cdd:pfam03154 219 NQTQSTAAP----HTLIQQTPTLHPQRLPSPHPPLQPMTQPP---PPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQH 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 587 HSSPSPIHTTPSPTHTTVSPTCTTPSSGHSTTSPTQEAKMSTHTTGAVGPVQT--------------TTSPISTTESPSP 652
Cdd:pfam03154 292 PVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQPlppaplsmphikppPTTPIPQLPNPQS 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 653 STDVAIISSSSAESTGPGTEPLPCSHPASPPYTKADPTASCTSYQSLasSGSKPLTSPaPDSPEQIPKSPSSSPSSSAPE 732
Cdd:pfam03154 372 HKHPPHLSGPSPFQMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLM--PQSQQLPPP-PAQPPVLTQSQSLPPPAASHP 448
|
410
....*....|....*...
gi 568957765 733 PQHSEHNLAavAQAPVPE 750
Cdd:pfam03154 449 PTSGLHQVP--SQSPFPQ 464
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
379-716 |
3.04e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.08 E-value: 3.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 379 VAFRRPESLTSGSMDEEPAMTPSLVNGHAPYSRTLSHISEASVDAALTEAVEAVDSQSPIPGPSPLVYPDSTHVERVSSV 458
Cdd:PHA03307 55 VVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 459 LPVLNNGHSATSPALSTTGPAPtfiDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSlVNSVPSLTSTTIGSAH 538
Cdd:PHA03307 135 SEMLRPVGSPGPPPAASPPAAG---ASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPP-PSTPPAAASPRPPRRS 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 539 TTTPSPLTSTGSVP--NATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPTHSSPSPIHTTPSPTHTTVSPTCTTPSSGHS 616
Cdd:PHA03307 211 SPISASASSPAPAPgrSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 617 TTSPTQEAKMSThttgAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLP-CSHPASPPYTKADPTASCTS 695
Cdd:PHA03307 291 PRERSPSPSPSS----PGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPsPSRSPSPSRPPPPADPSSPR 366
|
330 340
....*....|....*....|.
gi 568957765 696 yQSLASSGSKPLTSPAPDSPE 716
Cdd:PHA03307 367 -KRPRPSRAPSSPAASAGRPT 386
|
|
| Metaviral_G |
pfam09595 |
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. ... |
553-701 |
3.65e-03 |
|
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. It is high in serine and threonine suggesting it is highly glycosylated.
Pssm-ID: 462833 [Multi-domain] Cd Length: 183 Bit Score: 39.94 E-value: 3.65e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 553 NATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPTHSSPSPiHTTPSPTHTTVSPTCTTPSSGHSTTSPTQEAKMSTHTTG 632
Cdd:pfam09595 46 IITDIIDININKQHPEQEHHENPPLNEAAKEAPSESEDAP-DIDPNNQHPSQDRSEAPPLEPAAKTKPSEHEPANPPDAS 124
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 568957765 633 AvgpvqTTTSPISTTESPSPSTdvaiisSSSAESTGPGTEPLPCSHPASPPYTKADPTASCTSYQSLAS 701
Cdd:pfam09595 125 N-----RLSPPDASTAAIREAR------TFRKPSTGKRNNPSSAQSDQSPPRANHEAIGRANPFAMSST 182
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
423-622 |
3.85e-03 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 41.28 E-value: 3.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 423 AALTEAVEAVDSQSPIPGPSPLVYPDSTHVERVSSVLPVLNNGHSATSPALSTTGPAPTFIDPAPTTqldlvhkTTDSAP 502
Cdd:COG3469 30 ASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATSTSATL-------VATSTA 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 503 SELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSPLTSTGSVPNATDSTQATPSPTHSTPSPTHTTirlthtT 582
Cdd:COG3469 103 SGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGTTTTSTTTTTTSA------S 176
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 568957765 583 VSPTHSSPSPIHTTPSPTHTTVSPTcTTPSSGHSTTSPTQ 622
Cdd:COG3469 177 TTPSATTTATATTASGATTPSATTT-ATTTGPPTPGLPKH 215
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
565-717 |
4.39e-03 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 40.27 E-value: 4.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 565 THSTPSPTHTTIRLTHTTVS-PTHSSPSPIHTTPSPTHTTVSPTCTTPSSGHSTTSPTqeakmsthTTGAVGPVQTTTSP 643
Cdd:PHA03255 25 TSSGSSTASAGNVTGTTAVTtPSPSASGPSTNQSTTLTTTSAPITTTAILSTNTTTVT--------STGTTVTPVPTTSN 96
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 568957765 644 ISTtesPSPSTDVAIISSSSAEsTGPGTEPLPCSHPAsppyTKADPTASCTSYQSLASSGSKPLTSPAPDSPEQ 717
Cdd:PHA03255 97 AST---INVTTKVTAQNITATE-AGTGTSTGVTSNVT----TRSSSTTSATTRITNATTLAPTLSSKGTSNATK 162
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
1108-1173 |
4.76e-03 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 37.32 E-value: 4.76e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 568957765 1108 LEDGDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQCGEEGQSAHrqLEESLD 1173
Cdd:pfam13646 9 LRDPDPEVRAAAIRALGRIGDPEAVPALLELLKDEDPAVRRAAAEALGKIGDPEALPA--LLELLR 72
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
469-654 |
6.07e-03 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 39.89 E-value: 6.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 469 TSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAysavslvnsvpsLTSTTIGSAHTTTPSPLtst 548
Cdd:PHA03255 20 TSLIWTSSGSSTASAGNVTGTTAVTTPSPSASGPSTNQSTTLTTTSAP------------ITTTAILSTNTTTVTST--- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 568957765 549 gsvpnatdSTQATPSPTHSTPSPTHTTIRLTHTTVSPThsspspihttpspthttvsptcttpSSGHSTTSPTQE--AKM 626
Cdd:PHA03255 85 --------GTTVTPVPTTSNASTINVTTKVTAQNITAT-------------------------EAGTGTSTGVTSnvTTR 131
|
170 180
....*....|....*....|....*...
gi 568957765 627 STHTTGAvgpvqTTTSPISTTESPSPST 654
Cdd:PHA03255 132 SSSTTSA-----TTRITNATTLAPTLSS 154
|
|
| |
