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Conserved domains on  [gi|578809935|ref|XP_006714542|]
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UPF0489 protein C5orf22 isoform X5 [Homo sapiens]

Protein Classification

UPF0489 family protein( domain architecture ID 10576914)

UPF0489 family protein similar to Homo sapiens UPF0489 protein C5orf22

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
UPF0489 pfam12640
UPF0489 domain; This family is probably an enzyme which is related to the Arginase family.
 1-87 3.26e-30

UPF0489 domain; This family is probably an enzyme which is related to the Arginase family.


:

Pssm-ID: 432689  Cd Length: 177  Bit Score: 113.79  E-value: 3.26e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809935    1 MPAVYAGHFSHVIWFHPTWAQQIREGRHHFLVGKDTSttTIRVTSTDHYFLSDGLYVPEDQLENQKPLQLDVIMVKPYKL 80
Cdd:pfam12640  76 LPAVYAGHISRVVWIKPPWGDQIPEGRHQFLVGKDPS--SIRVDSPLDYFLSEGLYAPEDQLEDIKQLDLHVYEAEGYIL 153


                  ....*..
gi 578809935   81 CNNQEEN 87
Cdd:pfam12640 154 LEIDNLA 160
 
Name Accession Description Interval E-value
UPF0489 pfam12640
UPF0489 domain; This family is probably an enzyme which is related to the Arginase family.
 1-87 3.26e-30

UPF0489 domain; This family is probably an enzyme which is related to the Arginase family.


Pssm-ID: 432689  Cd Length: 177  Bit Score: 113.79  E-value: 3.26e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809935    1 MPAVYAGHFSHVIWFHPTWAQQIREGRHHFLVGKDTSttTIRVTSTDHYFLSDGLYVPEDQLENQKPLQLDVIMVKPYKL 80
Cdd:pfam12640  76 LPAVYAGHISRVVWIKPPWGDQIPEGRHQFLVGKDPS--SIRVDSPLDYFLSEGLYAPEDQLEDIKQLDLHVYEAEGYIL 153


                  ....*..
gi 578809935   81 CNNQEEN 87
Cdd:pfam12640 154 LEIDNLA 160
 
Name Accession Description Interval E-value
UPF0489 pfam12640
UPF0489 domain; This family is probably an enzyme which is related to the Arginase family.
 1-87 3.26e-30

UPF0489 domain; This family is probably an enzyme which is related to the Arginase family.


Pssm-ID: 432689  Cd Length: 177  Bit Score: 113.79  E-value: 3.26e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 578809935    1 MPAVYAGHFSHVIWFHPTWAQQIREGRHHFLVGKDTSttTIRVTSTDHYFLSDGLYVPEDQLENQKPLQLDVIMVKPYKL 80
Cdd:pfam12640  76 LPAVYAGHISRVVWIKPPWGDQIPEGRHQFLVGKDPS--SIRVDSPLDYFLSEGLYAPEDQLEDIKQLDLHVYEAEGYIL 153


                  ....*..
gi 578809935   81 CNNQEEN 87
Cdd:pfam12640 154 LEIDNLA 160
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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