|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
460-1184 |
4.50e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 77.40 E-value: 4.50e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 460 LVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRtaehEAAQQDLQSKFVAKENEVQSLHSKLT 539
Cdd:TIGR02168 230 LVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSEL----EEEIEELQKELYALANEISRLEQQKQ 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 540 DTLVSKQQLEQRLMQLMESEQKRASQEE-------SMQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIA 612
Cdd:TIGR02168 306 ILRERLANLERQLEELEAQLEELESKLDelaeelaELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLR 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 613 EKDKQLKQTEDSLASEQDHLASKEQELKDvqnvnfllkaEVQKLQALAKEQAAAAHEVEKmqKSVHVKDDKIRLLEEQLQ 692
Cdd:TIGR02168 386 SKVAQLELQIASLNNEIERLEARLERLED----------RRERLQQEIEELLKKLEEAEL--KELQAELEELEEELEELQ 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 693 REVASRVEELKILNDQNKALQLEVQKLQAVVSE-QPNKDVVEQMKKCIQEKDEKLRTVEELLETG---------LIQV-- 760
Cdd:TIGR02168 454 EELERLEEALEELREELEEAEQALDAAERELAQlQARLDSLERLQENLEGFSEGVKALLKNQSGLsgilgvlseLISVde 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 761 -------ATREEELNAIRTENSSLTKE-VQELKAKQMDQVPFVSLIEDLKKVIHEKDGQIKsveellevellkvANKEKT 832
Cdd:TIGR02168 534 gyeaaieAALGGRLQAVVVENLNAAKKaIAFLKQNELGRVTFLPLDSIKGTEIQGNDREIL-------------KNIEGF 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 833 VQALKQEIEILKEEIGNAQLEKAHQLSVTS--QVQELQNLLRGKEEQVdsmkaaleDLTGREKCTQVCSTPRFEELENVL 910
Cdd:TIGR02168 601 LGVAKDLVKFDPKLRKALSYLLGGVLVVDDldNALELAKKLRPGYRIV--------TLDGDLVRPGGVITGGSAKTNSSI 672
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 911 KEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQlnhqnhqqasfpsqeeLQTVISEKEKEITDLCNELE 990
Cdd:TIGR02168 673 LERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQ----------------LRKELEELSRQISALRKDLA 736
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 991 SLKNAVEHQRKKNNERQQQVEAVELESKDLLKRLfpavsvpsHSNYSEWLRSFEKKAKACMAGPSDTEAVKVLEHRLKEA 1070
Cdd:TIGR02168 737 RLEAEVEQLEERIAQLSKELTELEAEIEELEERL--------EEAEEELAEAEAEIEELEAQIEQLKEELKALREALDEL 808
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1071 NEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKVKAEE---SRRTIQQLRREREHLEIELEKAEVERSTYVME 1147
Cdd:TIGR02168 809 RAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDiesLAAEIEELEELIEELESELEALLNERASLEEA 888
|
730 740 750
....*....|....*....|....*....|....*..
gi 672077858 1148 VRELKTQLNETHSKLQNEQTERKKVADDLHKAQQSLN 1184
Cdd:TIGR02168 889 LALLRSELEELSEELRELESKRSELRRELEELREKLA 925
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
448-997 |
5.63e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 76.90 E-value: 5.63e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 448 AELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAK 527
Cdd:COG1196 232 LKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERR 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 528 ENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEEL 607
Cdd:COG1196 312 RELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEA 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 608 HKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLL 687
Cdd:COG1196 392 LRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 688 EEQLQREVASRVEELKILNDQNKALQLEVQKLQAVVSEQPNKDVVEQMKKCIQEKDEkLRTVEELLETgLIQVATREEEL 767
Cdd:COG1196 472 AALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAV-LIGVEAAYEA-ALEAALAAALQ 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 768 NAIRTENSSLTKEVQELKAKQMDQVPFVSLIEDLKKVIHEKD---GQIKSVEELLEVELLKVANKEKTVQALKQEIEILK 844
Cdd:COG1196 550 NIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAAlarGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVA 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 845 EEIGNAQ-LEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKctqvcstpRFEELENVLKEKDNEIKRIEAI 923
Cdd:COG1196 630 ARLEAALrRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEA--------ELEELAERLAEEELELEEALLA 701
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 672077858 924 LKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKE--ITDLCNELESLKNAVE 997
Cdd:COG1196 702 EEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPpdLEELERELERLEREIE 777
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
400-1190 |
7.24e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 76.63 E-value: 7.24e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 400 YQETQQMQMKFEQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNklrqdcgrLVSELNEKTGKLQQEGVQKK 479
Cdd:TIGR02168 241 LEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYA--------LANEISRLEQQKQILRERLA 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 480 NAEQAAAQLKVQLQEAERRWEEVQsyirKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESE 559
Cdd:TIGR02168 313 NLERQLEELEAQLEELESKLDELA----EELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKV 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 560 QKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAE--ELHKVIAEKDKQLKQTEDSLASEQDHLASKEQ 637
Cdd:TIGR02168 389 AQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAElkELQAELEELEEELEELQEELERLEEALEELRE 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 638 ELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVhvkddKIRLLEEQLQREVASRVEELkILNDQNKALQLEV- 716
Cdd:TIGR02168 469 ELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGV-----KALLKNQSGLSGILGVLSEL-ISVDEGYEAAIEAa 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 717 --QKLQAVVSEqpNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQVPF 794
Cdd:TIGR02168 543 lgGRLQAVVVE--NLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSY 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 795 ----VSLIEDLKKVIHE------------KDGQIKSVEELLEVELLKVANKektVQALKQEIEILKEEIgNAQLEKAHQL 858
Cdd:TIGR02168 621 llggVLVVDDLDNALELakklrpgyrivtLDGDLVRPGGVITGGSAKTNSS---ILERRREIEELEEKI-EELEEKIAEL 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 859 SVtsQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVCSTPRFEELENVLKEKDN---EIKRIEAILKDTKSDLSKKA 935
Cdd:TIGR02168 697 EK--ALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQlskELTELEAEIEELEERLEEAE 774
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 936 ELLKEVQDENKLFKSQVEQLNHQNHQQASfpSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNERQQQVEAVEl 1015
Cdd:TIGR02168 775 EELAEAEAEIEELEAQIEQLKEELKALRE--ALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELS- 851
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1016 eskdllkrlfpavsvpshsnysewlrsfekkakacmagpsdtEAVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGIL 1095
Cdd:TIGR02168 852 ------------------------------------------EDIESLAAEIEELEELIEELESELEALLNERASLEEAL 889
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1096 QKLQRSVEQEESKwkvkAEESRRTIQQLRREREHLEIELEKAEVERSTYVMEVRELKTQLNETHS-KLQNEQTERKKVAD 1174
Cdd:TIGR02168 890 ALLRSELEELSEE----LRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSlTLEEAEALENKIED 965
|
810
....*....|....*.
gi 672077858 1175 DLHKAQQSLNFIHSKI 1190
Cdd:TIGR02168 966 DEEEARRRLKRLENKI 981
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
310-961 |
3.27e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 64.69 E-value: 3.27e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 310 LKEKSGVIKEALKKSNKgELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKER---SSVVMARMKERIGTLE 386
Cdd:TIGR02168 300 LEQQKQILRERLANLER-QLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAEleeLEAELEELESRLEELE 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 387 KEHNIFQNKMHVSYQETQQMQMKfeqvREQMEAEIAHLKQENGILRdavSNTTNQLESKQSAELNKLRQDCGRLVSELNE 466
Cdd:TIGR02168 379 EQLETLRSKVAQLELQIASLNNE----IERLEARLERLEDRRERLQ---QEIEELLKKLEEAELKELQAELEELEEELEE 451
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 467 KTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSyirkRTAEHEAAQQDLQSKFVAKENEVQSLhSKLTDTLvskq 546
Cdd:TIGR02168 452 LQEELERLEEALEELREELEEAEQALDAAERELAQLQA----RLDSLERLQENLEGFSEGVKALLKNQ-SGLSGIL---- 522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 547 qleQRLMQLMESEQK-RASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSA-SVLAEELHKVIAEKDKQLKQTEDS 624
Cdd:TIGR02168 523 ---GVLSELISVDEGyEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTfLPLDSIKGTEIQGNDREILKNIEG 599
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 625 LASEQDHLASKEQELKDVqnVNFLL-----------KAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQR 693
Cdd:TIGR02168 600 FLGVAKDLVKFDPKLRKA--LSYLLggvlvvddldnALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILERRR 677
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 694 EVASRVEELKILNDQNKALQLEVQKLQAVVSEQpnKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTE 773
Cdd:TIGR02168 678 EIEELEEKIEELEEKIAELEKALAELRKELEEL--EEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKE 755
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 774 NSSLTKEVQELKAKqmdqvpfvslIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLE 853
Cdd:TIGR02168 756 LTELEAEIEELEER----------LEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRER 825
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 854 KAHQL----SVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREkctqvcstprfEELENVLKEKDNEIKRIEAILKDTKS 929
Cdd:TIGR02168 826 LESLErriaATERRLEDLEEQIEELSEDIESLAAEIEELEELI-----------EELESELEALLNERASLEEALALLRS 894
|
650 660 670
....*....|....*....|....*....|..
gi 672077858 930 DLSKKAELLKEVQDENKLFKSQVEQLNHQNHQ 961
Cdd:TIGR02168 895 ELEELSEELRELESKRSELRRELEELREKLAQ 926
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
606-1157 |
3.56e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 64.70 E-value: 3.56e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 606 ELHKVIAEKDKQLKQTED---SLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDD 682
Cdd:PRK03918 173 EIKRRIERLEKFIKRTENieeLIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEG 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 683 KIRLLEEQLqREVASRVEELKilndqnkalqLEVQKLQAVVSEQPNkdvveqmkkcIQEKDEKLRTVEELLETGLIQVAT 762
Cdd:PRK03918 253 SKRKLEEKI-RELEERIEELK----------KEIEELEEKVKELKE----------LKEKAEEYIKLSEFYEEYLDELRE 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 763 REEELNAIRTENSSLTKEVQELKAKQMDqvpfVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALK-QEIE 841
Cdd:PRK03918 312 IEKRLSRLEEEINGIEERIKELEEKEER----LEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTgLTPE 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 842 ILKEEIGNAQLEKahqLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVCSTPRFEE-LENVLKEKDNEIKRI 920
Cdd:PRK03918 388 KLEKELEELEKAK---EEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEhRKELLEEYTAELKRI 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 921 EAILKDTKSDLSK----KAELLKEVQDENKLF---------KSQVEQLNHQNHQQASFPSQ--EELQTVISEKEKEITDL 985
Cdd:PRK03918 465 EKELKEIEEKERKlrkeLRELEKVLKKESELIklkelaeqlKELEEKLKKYNLEELEKKAEeyEKLKEKLIKLKGEIKSL 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 986 CNELESLKNAvehqRKKNNERQQQVEAVELESKDLLKRLfPAVSVPSHSNYSEWLRSFEKKAKACMAgpsdteaVKVLEH 1065
Cdd:PRK03918 545 KKELEKLEEL----KKKLAELEKKLDELEEELAELLKEL-EELGFESVEELEERLKELEPFYNEYLE-------LKDAEK 612
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1066 RLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKVKA-EESRRTIQQLRREREHLEIELEKAEVERSTY 1144
Cdd:PRK03918 613 ELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEyEELREEYLELSRELAGLRAELEELEKRREEI 692
|
570
....*....|...
gi 672077858 1145 VMEVRELKTQLNE 1157
Cdd:PRK03918 693 KKTLEKLKEELEE 705
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
444-1018 |
6.84e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 60.03 E-value: 6.84e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 444 SKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTaEHEAAQQDLQSK 523
Cdd:TIGR04523 148 KKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNK-SLESQISELKKQ 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 524 FVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAA--QTSAS 601
Cdd:TIGR04523 227 NNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDlnNQKEQ 306
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 602 VLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDvqnvnflLKAEVQKLQAlakeqaaaahEVEKMQKSVHVKD 681
Cdd:TIGR04523 307 DWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQ-------LKKELTNSES----------ENSEKQRELEEKQ 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 682 DKIrlleEQLQREVASRVEELKILNDQNKALQLEVQKlqavvSEQPNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQva 761
Cdd:TIGR04523 370 NEI----EKLKKENQSYKQEIKNLESQINDLESKIQN-----QEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKN-- 438
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 762 trEEELNAIRTENSSLTKEVQELKakqmdqvpfvSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIE 841
Cdd:TIGR04523 439 --NSEIKDLTNQDSVKELIIKNLD----------NTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKK 506
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 842 ILKEEIGNAQLEKAhqlSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKctqvcstprFEELENVLKEKDNEIKRIE 921
Cdd:TIGR04523 507 ELEEKVKDLTKKIS---SLKEKIEKLESEKKEKESKISDLEDELNKDDFELK---------KENLEKEIDEKNKEIEELK 574
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 922 AILKDTKSDLSKKAELLKEVQDENKLFKSQVeqlnhqnhqqasfpsqEELQTVISEKEKEITDLCNELESLKNAVEHQRK 1001
Cdd:TIGR04523 575 QTQKSLKKKQEEKQELIDQKEKEKKDLIKEI----------------EEKEKKISSLEKELEKAKKENEKLSSIIKNIKS 638
|
570
....*....|....*..
gi 672077858 1002 KNNERQQQVEAVELESK 1018
Cdd:TIGR04523 639 KKNKLKQEVKQIKETIK 655
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
581-1186 |
8.38e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 60.15 E-value: 8.38e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 581 EALKAQIQQfHSQIAAQTSASVLAEELHKVI-AEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQAL 659
Cdd:PTZ00121 1162 DARKAEEAR-KAEDAKKAEAARKAEEVRKAEeLRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAE 1240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 660 AKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQREVASRVEELKILNDQNKALQL----EVQKLQAVVSEQPNKDVVEQM 735
Cdd:PTZ00121 1241 EAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAkkaeEKKKADEAKKKAEEAKKADEA 1320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 736 KKCIQEKDEKLRTVEELLETG--LIQVATREEELNAIRTENSSLTKEVQELKAKQMDQVPfvsliEDLKKVIHEKdgQIK 813
Cdd:PTZ00121 1321 KKKAEEAKKKADAAKKKAEEAkkAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKA-----DAAKKKAEEK--KKA 1393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 814 SVEELLEVELLKVANKEKTVQALKQEIEILKEEIgnAQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREK 893
Cdd:PTZ00121 1394 DEAKKKAEEDKKKADELKKAAAAKKKADEAKKKA--EEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKK 1471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 894 CTQVCSTPRFEELENVLKEKDNEIKRieailkdtKSDLSKKAELLKEVQDENKlfKSQVEQLNHQNHQQASFPSQEELQT 973
Cdd:PTZ00121 1472 ADEAKKKAEEAKKADEAKKKAEEAKK--------KADEAKKAAEAKKKADEAK--KAEEAKKADEAKKAEEAKKADEAKK 1541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 974 ViseKEKEITDLCNELESLKNAVEHQRKKNNERQQQVEAVELESKDLLKRLFPAVSVPSHSNYSEWLRSFEKKAKACMAG 1053
Cdd:PTZ00121 1542 A---EEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEA 1618
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1054 PSDTEAVKVLEHRLKEANEMHTLLQLECEKYKSVL-AETEGILQKLQRSVEQEESKWKVKA-----EESRRTIQQLRRER 1127
Cdd:PTZ00121 1619 KIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKkAEEENKIKAAEEAKKAEEDKKKAEEakkaeEDEKKAAEALKKEA 1698
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 672077858 1128 EHLEI--ELEKAEVERSTYVMEVRELKTQLNETHSKLQNEQTERKKVADDLHKAQQSLNFI 1186
Cdd:PTZ00121 1699 EEAKKaeELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKI 1759
|
|
| Rib_recp_KP_reg |
pfam05104 |
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards ... |
29-146 |
1.42e-08 |
|
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards the C-terminus of the transmembrane domain. The function is unclear.
Pssm-ID: 461548 [Multi-domain] Cd Length: 140 Bit Score: 54.74 E-value: 1.42e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 29 MKETLYDDVLAKQKREQKLISTKADKKKAEKKKNKKK------EIQNGTLHESD----SEHVPQDFKLSDASPVEDEqfV 98
Cdd:pfam05104 1 MKETSYEEALAKQRRELKKTPTEKEKKKKEKKKEKKKkskkkeEKPNGKLPESEqadeSEEEPREFKTPDEAPSAAL--E 78
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 672077858 99 PAPLSVAETSSSVRERKKKEKKQKPSLEEHIIKESDASKIPGKKVEPV 146
Cdd:pfam05104 79 PEPVPTPVPAPVEPEPAPPSESPAPSPKEKKKKEKKSAKVEPAETPEA 126
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
411-1140 |
1.73e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 58.98 E-value: 1.73e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 411 EQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNK--LRQDCGRLVSELNEKTGKLQQEgvQKKNAEQAAAQL 488
Cdd:pfam15921 141 EDLRNQLQNTVHELEAAKCLKEDMLEDSNTQIEQLRKMMLSHegVLQEIRSILVDFEEASGKKIYE--HDSMSTMHFRSL 218
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 489 KVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEqrLMQLMESEQKRASQEES 568
Cdd:pfam15921 219 GSAISKILRELDTEISYLKGRIFPVEDQLEALKSESQNKIELLLQQHQDRIEQLISEHEVE--ITGLTEKASSARSQANS 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 569 MQIQVQDILEQNEALKAQIQQFHSQIaaQTSASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFL 648
Cdd:pfam15921 297 IQSQLEIIQEQARNQNSMYMRQLSDL--ESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGN 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 649 LKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQREvasrveelkiLNDQNkalqLEVQKLQAVVSEQPN 728
Cdd:pfam15921 375 LDDQLQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRE----------LDDRN----MEVQRLEALLKAMKS 440
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 729 --KDVVEQMKKCIQEKDEKLRTVEELLETgliqvatreeelnaIRTENSSLTKEVQELKAKQMDQVPFVSLIEDLKKVIH 806
Cdd:pfam15921 441 ecQGQMERQMAAIQGKNESLEKVSSLTAQ--------------LESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQ 506
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 807 EKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEilkeeignaqlekaHQLSVTSQVQELQNLLRGKEEQVDSMKAALE 886
Cdd:pfam15921 507 EKERAIEATNAEITKLRSRVDLKLQELQHLKNEGD--------------HLRNVQTECEALKLQMAEKDKVIEILRQQIE 572
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 887 DLT---GREKCTQVCSTPRFEELENVLKEKDNEIKRIEaILKDTKSdlSKKAELLKEVQD----ENKLFKSQVEQLNHQN 959
Cdd:pfam15921 573 NMTqlvGQHGRTAGAMQVEKAQLEKEINDRRLELQEFK-ILKDKKD--AKIRELEARVSDleleKVKLVNAGSERLRAVK 649
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 960 HQQAsfpSQEELQTVISEKEKEITDLCNELESLK----NAVEHQRKKNNERQQQVEAVELESKDLLKRLFPAVSVPSHSn 1035
Cdd:pfam15921 650 DIKQ---ERDQLLNEVKTSRNELNSLSEDYEVLKrnfrNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHA- 725
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1036 ysewLRSFEKKAKACMAGPSDTEAVKVLEHRLKEAnemhtllQLECEKYKSVLAETEGILQKLQRSVEQEESKWKVKAEE 1115
Cdd:pfam15921 726 ----MKVAMGMQKQITAKRGQIDALQSKIQFLEEA-------MTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEV 794
|
730 740
....*....|....*....|....*
gi 672077858 1116 SRRTIQQLRREREHLEIELEKAEVE 1140
Cdd:pfam15921 795 LRSQERRLKEKVANMEVALDKASLQ 819
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
328-888 |
2.08e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 58.79 E-value: 2.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 328 ELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKERSsvvmARMKERIGTLEKEHnifqnkmhvsyQETQQMQ 407
Cdd:COG1196 268 ELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERR----RELEERLEELEEEL-----------AELEEEL 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 408 MKFEQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQdcgrlvselnektgkLQQEGVQKKNAEQAAAQ 487
Cdd:COG1196 333 EELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEE---------------LEELAEELLEALRAAAE 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 488 LKVQLQEAERRWEEvqsyIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEE 567
Cdd:COG1196 398 LAAQLEELEEAEEA----LLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 568 SMQIQVQDILEQNEALKAQIQQFHSQIA--AQTSASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQE-LKDVQN 644
Cdd:COG1196 474 LLEAALAELLEELAEAAARLLLLLEAEAdyEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAaLQNIVV 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 645 VNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQREVASRVEELKIlndqnKALQLEVQKLQAVVS 724
Cdd:COG1196 554 EDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADA-----RYYVLGDTLLGRTLV 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 725 EQPNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQvpfvsliEDLKKV 804
Cdd:COG1196 629 AARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELEL-------EEALLA 701
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 805 IHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEKAHQLSVTSQVQELQnllrgkEEQVDSMKAA 884
Cdd:COG1196 702 EEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEEL------ERELERLERE 775
|
....
gi 672077858 885 LEDL 888
Cdd:COG1196 776 IEAL 779
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
358-1131 |
2.40e-08 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 58.44 E-value: 2.40e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 358 KQLTQEMMTEKERSSVVMARMKERIGTLEKEHNIFQNKMHVSYQETQQMQMKFEQVREQMEAEIAHLKQENGILRDAVSN 437
Cdd:TIGR00618 165 KKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAY 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 438 TTNQLESKQSAElnKLRQDCGRLVSELNEKTGKLqqegvqkknAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQ 517
Cdd:TIGR00618 245 LTQKREAQEEQL--KKQQLLKQLRARIEELRAQE---------AVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIH 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 518 QDLQSKFVAKENEVQSLHSKLTDTLVSKQQleQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQ 597
Cdd:TIGR00618 314 TELQSKMRSRAKLLMKRAAHVKQQSSIEEQ--RRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTL 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 598 TSAS-VLAEELHKVIAEKDKQLKQTEdSLASEQDHLASKEQELKDVQNVNFLLKAEVQKlqaLAKEQAAAAHEVEKMQKS 676
Cdd:TIGR00618 392 TQKLqSLCKELDILQREQATIDTRTS-AFRDLQGQLAHAKKQQELQQRYAELCAAAITC---TAQCEKLEKIHLQESAQS 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 677 VHVKDDKIRLLEEQLQREVASRVEELKILNdqnkalqlEVQKLQAVVSEQPNKDVVEQMKKCIQEKDEKLrtveelLETG 756
Cdd:TIGR00618 468 LKEREQQLQTKEQIHLQETRKKAVVLARLL--------ELQEEPCPLCGSCIHPNPARQDIDNPGPLTRR------MQRG 533
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 757 LIQVATREEELNAIRTENSSLTKEVQELKAKQMdqvpfvSLIEDLKKVihekdgqiksveellevELLKVANKEKTVQAL 836
Cdd:TIGR00618 534 EQTYAQLETSEEDVYHQLTSERKQRASLKEQMQ------EIQQSFSIL-----------------TQCDNRSKEDIPNLQ 590
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 837 KQEIEILKEEIGNAQLEKahqlsvtSQVQELQNLLRGKEEQVDSMKAALEDlTGREKCTQVCSTPRFEELENVLKEKDNE 916
Cdd:TIGR00618 591 NITVRLQDLTEKLSEAED-------MLACEQHALLRKLQPEQDLQDVRLHL-QQCSQELALKLTALHALQLTLTQERVRE 662
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 917 IKRieAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHqqasfpSQEELQTVISEKEKEITDLCNELESLKNAV 996
Cdd:TIGR00618 663 HAL--SIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQT------LLRELETHIEEYDREFNEIENASSSLGSDL 734
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 997 EHQRKKNNERQQQVEAvelESKDLLKRLfpavsvpshsnYSEWLRSFEKKAKACMAGPSDTEAVKVLEHRLKEANEMHTL 1076
Cdd:TIGR00618 735 AAREDALNQSLKELMH---QARTVLKAR-----------TEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREEDTHL 800
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 672077858 1077 LQLECEKYKSVLAETEGILQKLQRSVEQEESKWKVKAEESRRTIQQLRREREHLE 1131
Cdd:TIGR00618 801 LKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYE 855
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
473-1136 |
1.04e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 56.69 E-value: 1.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 473 QEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRL 552
Cdd:PTZ00121 1182 RKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEAR 1261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 553 MQLMESEQKRASQEESMQiqVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEElhkviAEKDKQLKQTEDSLASEQDHL 632
Cdd:PTZ00121 1262 MAHFARRQAAIKAEEARK--ADELKKAEEKKKADEAKKAEEKKKADEAKKKAEE-----AKKADEAKKKAEEAKKKADAA 1334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 633 ASKEQELKDvqnvnfllKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQREVASRVEELKILNDQNKAL 712
Cdd:PTZ00121 1335 KKKAEEAKK--------AAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKK 1406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 713 QLEVQKLQAvvseqpNKDVVEQMKKciqeKDEKLRTVEELLETGliQVATREEELNAIRTEnsslTKEVQELKAKQMDQv 792
Cdd:PTZ00121 1407 ADELKKAAA------AKKKADEAKK----KAEEKKKADEAKKKA--EEAKKADEAKKKAEE----AKKAEEAKKKAEEA- 1469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 793 pfvSLIEDLKKVIHEKDgQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEignaQLEKAHQLSVTSQVQELQNLLR 872
Cdd:PTZ00121 1470 ---KKADEAKKKAEEAK-KADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAE----EAKKADEAKKAEEAKKADEAKK 1541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 873 GKE-EQVDSMKAAlEDLTGREKCTQVCSTPRFEELENVLKEKDNEIK-----RIEAILKDTKSDLSKKAELLKEVQDEnk 946
Cdd:PTZ00121 1542 AEEkKKADELKKA-EELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKkaeeaRIEEVMKLYEEEKKMKAEEAKKAEEA-- 1618
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 947 lfKSQVEQLNHQNHQQASFpsqEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNERQQQVEAVELESKDllkrlfp 1026
Cdd:PTZ00121 1619 --KIKAEELKKAEEEKKKV---EQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEED------- 1686
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1027 avsvpshsnysewlrsfeKKAKACMAGPSDTEAVKVLEHRLKEANEMHtllqlECEKYKSVLAETEGILQKLQRSVEQEe 1106
Cdd:PTZ00121 1687 ------------------EKKAAEALKKEAEEAKKAEELKKKEAEEKK-----KAEELKKAEEENKIKAEEAKKEAEED- 1742
|
650 660 670
....*....|....*....|....*....|....*.
gi 672077858 1107 skwKVKAEESR------RTIQQLRREREHLEIELEK 1136
Cdd:PTZ00121 1743 ---KKKAEEAKkdeeekKKIAHLKKEEEKKAEEIRK 1775
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
575-1197 |
1.84e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 55.92 E-value: 1.84e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 575 DILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDK--QLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAE 652
Cdd:PTZ00121 1082 DAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKaeDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAE 1161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 653 VQKlQALAKEQAAAAHEVEKMQKSVHV-KDDKIRLLEEQLQREVASRVEELKILNDQNKALqlEVQKLQAVVSEQPNKDV 731
Cdd:PTZ00121 1162 DAR-KAEEARKAEDAKKAEAARKAEEVrKAEELRKAEDARKAEAARKAEEERKAEEARKAE--DAKKAEAVKKAEEAKKD 1238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 732 VEQMKKCiqekdEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQEL----KAKQMDQVPFVSLIEDLKKVIHE 807
Cdd:PTZ00121 1239 AEEAKKA-----EEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAeekkKADEAKKAEEKKKADEAKKKAEE 1313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 808 K------DGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQV--- 878
Cdd:PTZ00121 1314 AkkadeaKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKkka 1393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 879 -DSMKAALEDltgREKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKdtKSDLSKKAELLKEVQDENKlfksQVEQLNH 957
Cdd:PTZ00121 1394 dEAKKKAEED---KKKADELKKAAAAKKKADEAKKKAEEKKKADEAKK--KAEEAKKADEAKKKAEEAK----KAEEAKK 1464
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 958 QNHQQASfpsQEELQTVISEKEKEiTDLCNELESLKNAVEHQRKKNNERQQQVEAVELESKDLLKRLFPAvsvpSHSNYS 1037
Cdd:PTZ00121 1465 KAEEAKK---ADEAKKKAEEAKKA-DEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKA----EEAKKA 1536
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1038 EWLRSFEKKAKAcmagpsdtEAVKVLEHrLKEANEMHTLLQLE-CEKYKSVLAETEGILQKLQRSveQEESKWKVKAEES 1116
Cdd:PTZ00121 1537 DEAKKAEEKKKA--------DELKKAEE-LKKAEEKKKAEEAKkAEEDKNMALRKAEEAKKAEEA--RIEEVMKLYEEEK 1605
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1117 RRTIQQLRREREhleielEKAEVERSTYVMEVRELKTQLnethsklQNEQTERKKVADDLHKAQQSLNFIHSKISLKAAG 1196
Cdd:PTZ00121 1606 KMKAEEAKKAEE------AKIKAEELKKAEEEKKKVEQL-------KKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEE 1672
|
.
gi 672077858 1197 D 1197
Cdd:PTZ00121 1673 D 1673
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
327-814 |
2.35e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 55.33 E-value: 2.35e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 327 GELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKERSSVVMARMKERIGTLEKEHNIFQNKMHVSYQETQQM 406
Cdd:COG1196 288 AEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEAL 367
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 407 QMKFEQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDcgRLVSELNEKTGKLQQEGVQKKNAEQAAA 486
Cdd:COG1196 368 LEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLE--RLEEELEELEEALAELEEEEEEEEEALE 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 487 QLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQE 566
Cdd:COG1196 446 EAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGA 525
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 567 ESMQIQVQDILEQ--NEALKAQIQQFH---SQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKD 641
Cdd:COG1196 526 VAVLIGVEAAYEAalEAALAAALQNIVvedDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVA 605
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 642 VQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQREVASRVEELKILNDQNKALQLEVQKLQA 721
Cdd:COG1196 606 SDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELA 685
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 722 VVSEQPNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQVPFVSLIEDL 801
Cdd:COG1196 686 ERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEEL 765
|
490
....*....|...
gi 672077858 802 KKVIHEKDGQIKS 814
Cdd:COG1196 766 ERELERLEREIEA 778
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
482-1005 |
4.21e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 54.30 E-value: 4.21e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 482 EQAAAQLKVQLQEAERRWEEVQSYIrKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLmeseQK 561
Cdd:PRK03918 161 ENAYKNLGEVIKEIKRRIERLEKFI-KRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKEL----EE 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 562 RASQEESMQIQVQDILEQNEALKAQIQQFHSQIaaqtsasvlaEELHKVIAEKDKQLKQTEDSLASEQDHLASKEqELKD 641
Cdd:PRK03918 236 LKEEIEELEKELESLEGSKRKLEEKIRELEERI----------EELKKEIEELEEKVKELKELKEKAEEYIKLSE-FYEE 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 642 VQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVhvkdDKIRLLEEQLQREVAsRVEELKILNDQNKALQLEVQKLQA 721
Cdd:PRK03918 305 YLDELREIEKRLSRLEEEINGIEERIKELEEKEERL----EELKKKLKELEKRLE-ELEERHELYEEAKAKKEELERLKK 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 722 VVSEQPNKDVVEQMKKCIQEKDEKLRTVEELletgliqvatrEEELNAIRTENSSLTKEVQELK-AKQMDQVPFVSLIED 800
Cdd:PRK03918 380 RLTGLTPEKLEKELEELEKAKEEIEEEISKI-----------TARIGELKKEIKELKKAIEELKkAKGKCPVCGRELTEE 448
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 801 LKKVIHEK--------------DGQIKSVEELLEVELLKVANKEKTVQALKQ---EIEILKEEIGNAQLEKAHQlsVTSQ 863
Cdd:PRK03918 449 HRKELLEEytaelkriekelkeIEEKERKLRKELRELEKVLKKESELIKLKElaeQLKELEEKLKKYNLEELEK--KAEE 526
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 864 VQELQNLLRGKEEQVDSMKAALEDLTGREKctqvcstpRFEELENVLKEKDNEIKRIEAILKdtKSDLSKKAELLKEVQD 943
Cdd:PRK03918 527 YEKLKEKLIKLKGEIKSLKKELEKLEELKK--------KLAELEKKLDELEEELAELLKELE--ELGFESVEELEERLKE 596
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 672077858 944 ENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNE 1005
Cdd:PRK03918 597 LEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSE 658
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
460-1131 |
4.30e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 54.56 E-value: 4.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 460 LVSELNEKTGKLQQegvQKKNAEQAAAqLKVQLQEAE-----RRWEEVQSYIRKRTAEHEAAQQDLQskfvAKENEVQSL 534
Cdd:COG1196 194 ILGELERQLEPLER---QAEKAERYRE-LKEELKELEaelllLKLRELEAELEELEAELEELEAELE----ELEAELAEL 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 535 HSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSAsvlAEELHKVIAEK 614
Cdd:COG1196 266 EAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEE---LEELEEELEEL 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 615 DKQLKQTEDSLASEQDHLASKEQELKDVQNVnfLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQRE 694
Cdd:COG1196 343 EEELEEAEEELEEAEAELAEAEEALLEAEAE--LAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLE 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 695 VASRVEELKILNDQNKALQLEVQKLQAVVSEQPNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIrten 774
Cdd:COG1196 421 EELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLL---- 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 775 ssltKEVQELKAKQMDQVPFVSLIEDLKKVIHEKDGQIKSVEELLEVELLK-----VANKEKTVQALKQEIEILKEeign 849
Cdd:COG1196 497 ----LEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAAlaaalQNIVVEDDEVAAAAIEYLKA---- 568
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 850 AQLEKAHQLsvtsqvqELQNLLRGKEEQVDSMKAALEDLTGREKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKDTKS 929
Cdd:COG1196 569 AKAGRATFL-------PLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVT 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 930 DLSKKAELLKEVQDENKLFKSQVEQlnhqnhqqasfpsQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNERQQQ 1009
Cdd:COG1196 642 LAGRLREVTLEGEGGSAGGSLTGGS-------------RRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERE 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1010 VEAVELESKDLLKRlfpavsvpshsnysewlrsfekkakacmagpsdteavkVLEHRLKEANEMHTLLQLECEKYKSVLA 1089
Cdd:COG1196 709 LAEAEEERLEEELE--------------------------------------EEALEEQLEAEREELLEELLEEEELLEE 750
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 672077858 1090 ETEGILQKLqrsveqeeskwkVKAEESRRTIQQLRREREHLE 1131
Cdd:COG1196 751 EALEELPEP------------PDLEELERELERLEREIEALG 780
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
301-1032 |
4.69e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 54.30 E-value: 4.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 301 DEALCVVDLLKEK---SGVIKEALKKSNKGELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKER----SSV 373
Cdd:TIGR02169 208 EKAERYQALLKEKreyEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKikdlGEE 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 374 VMARMKERIGTLEKEHNIFQNKMHVSYQETQQMQ---MKFEQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQsAEL 450
Cdd:TIGR02169 288 EQLRVKEKIGELEAEIASLERSIAEKERELEDAEerlAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELK-EEL 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 451 NKLRQDcgrlVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENE 530
Cdd:TIGR02169 367 EDLRAE----LEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEE 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 531 VQSLHSKLtdtlvskQQLEQRLMQL---MESEQKRASQEESMQIQVQDILEQNE----ALKAQIQQFHSQIAAQTSASVL 603
Cdd:TIGR02169 443 KEDKALEI-------KKQEWKLEQLaadLSKYEQELYDLKEEYDRVEKELSKLQrelaEAEAQARASEERVRGGRAVEEV 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 604 AEELHKVIAEKDKQLKQTEDSLASEQDHLASK-------EQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKS 676
Cdd:TIGR02169 516 LKASIQGVHGTVAQLGSVGERYATAIEVAAGNrlnnvvvEDDAVAKEAIELLKRRKAGRATFLPLNKMRDERRDLSILSE 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 677 VHVKDDKIRLLEEQLQRE-----------VASRVEELKILNDQNKALQLE---VQKLQAVV----SEQPNKDVVEQMKKC 738
Cdd:TIGR02169 596 DGVIGFAVDLVEFDPKYEpafkyvfgdtlVVEDIEAARRLMGKYRMVTLEgelFEKSGAMTggsrAPRGGILFSRSEPAE 675
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 739 IQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKqmdqvpfvslIEDLKKVIHEKDGQIKSVEEL 818
Cdd:TIGR02169 676 LQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKE----------IEQLEQEEEKLKERLEELEED 745
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 819 LEVELLKVANKEKTVQALKQEIEILKEEIGN--AQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKctq 896
Cdd:TIGR02169 746 LSSLEQEIENVKSELKELEARIEELEEDLHKleEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLN--- 822
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 897 vcstpRFEELENVLKEKDNEIKRIEAILKDTKSDLSKKAELLK----EVQDENKLFKSQVEQLNHQnhqqasfpsQEELQ 972
Cdd:TIGR02169 823 -----RLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNgkkeELEEELEELEAALRDLESR---------LGDLK 888
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 973 TVISEKEKEITDLCNELESLKNAVEHQRKKNNERQQQVEAVELESKDLLKRLFPAVSVPS 1032
Cdd:TIGR02169 889 KERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPE 948
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
584-983 |
1.32e-06 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 53.13 E-value: 1.32e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 584 KAQIQQFHSQIAAQT-SASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKE 662
Cdd:TIGR00606 690 EAELQEFISDLQSKLrLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEE 769
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 663 QAAAAHEVEKMQKSVHVKDDKIRLLEeQLQREvasrveelkiLNDQNKALQLEVQKLQAVVSEQpnkdVVEQMKKCIQEK 742
Cdd:TIGR00606 770 QETLLGTIMPEEESAKVCLTDVTIME-RFQME----------LKDVERKIAQQAAKLQGSDLDR----TVQQVNQEKQEK 834
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 743 DEKLRTV-------EELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQVPFVSLIEDLKKVIHEKDGQI--- 812
Cdd:TIGR00606 835 QHELDTVvskielnRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDspl 914
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 813 -KSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQlekAHQLSVTSQVQE-LQNLLRGKEEQVDSMKAALEDLTG 890
Cdd:TIGR00606 915 eTFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIH---GYMKDIENKIQDgKDDYLKQKETELNTVNAQLEECEK 991
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 891 REKctqvcstpRFEELENVLKEKDNEIKRIEAILKDTKSdLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEE 970
Cdd:TIGR00606 992 HQE--------KINEDMRLMRQDIDTQKIQERWLQDNLT-LRKRENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEEN 1062
|
410
....*....|...
gi 672077858 971 LQTVISEKEKEIT 983
Cdd:TIGR00606 1063 IDLIKRNHVLALG 1075
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
669-1019 |
1.55e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 52.76 E-value: 1.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 669 EVEKMQKSVHVKDDKIRLLEEQLQREVASRVEELKIlndqnKALQLEVQKLQAVVSEQPNKDVVEQmkkcIQEKDEKLRT 748
Cdd:TIGR02169 178 ELEEVEENIERLDLIIDEKRQQLERLRREREKAERY-----QALLKEKREYEGYELLKEKEALERQ----KEAIERQLAS 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 749 VEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQVPfvSLIEDLKKVIHEKDGQIKSVEELLEVELLKVAN 828
Cdd:TIGR02169 249 LEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVK--EKIGELEAEIASLERSIAEKERELEDAEERLAK 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 829 KEKTVQALKQEIEILKEEIGNAQLEKAhqlSVTSQVQELQ---NLLRGKEEQVDSMKAALEDLTGREKCTQVCSTPRFEE 905
Cdd:TIGR02169 327 LEAEIDKLLAEIEELEREIEEERKRRD---KLTEEYAELKeelEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 906 LENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEE-----LQTVISEKEK 980
Cdd:TIGR02169 404 LKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEqelydLKEEYDRVEK 483
|
330 340 350
....*....|....*....|....*....|....*....
gi 672077858 981 EITDLCNELEslknAVEHQRKKNNERQQQVEAVELESKD 1019
Cdd:TIGR02169 484 ELSKLQRELA----EAEAQARASEERVRGGRAVEEVLKA 518
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
393-1023 |
1.55e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 52.81 E-value: 1.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 393 QNKMHVSYQetqQMQMKFEQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKlRQDCGRLVSELnektgklq 472
Cdd:pfam15921 255 QNKIELLLQ---QHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQ-NSMYMRQLSDL-------- 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 473 qegvqkknaEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRL 552
Cdd:pfam15921 323 ---------ESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKEL 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 553 MQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSasvlaeelhkviaEKDKQLKQTEDSLASEQDHL 632
Cdd:pfam15921 394 SLEKEQNKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKS-------------ECQGQMERQMAAIQGKNESL 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 633 ASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQReVASRVeELKILNDQNkaL 712
Cdd:pfam15921 461 EKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITK-LRSRV-DLKLQELQH--L 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 713 QLEVQKLQAVVSEqpnkdvVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQElkaKQMDQV 792
Cdd:pfam15921 537 KNEGDHLRNVQTE------CEALKLQMAEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEIND---RRLELQ 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 793 PFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEKAhqlSVTSQVQELQNLLR 872
Cdd:pfam15921 608 EFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELN---SLSEDYEVLKRNFR 684
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 873 GKEEQvdsmkaaLEDLTGREKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQV 952
Cdd:pfam15921 685 NKSEE-------METTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAM 757
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 672077858 953 EQLNHQNH--QQASFPSQEELQTVISEKEKeitdLCNELESLKNAVEHQRKKNNERQQQVEAVEL---ESKDLLKR 1023
Cdd:pfam15921 758 TNANKEKHflKEEKNKLSQELSTVATEKNK----MAGELEVLRSQERRLKEKVANMEVALDKASLqfaECQDIIQR 829
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
351-805 |
1.89e-06 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 52.36 E-value: 1.89e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 351 AATKERCKQLTQEMmteKERSSVVMARMKERIGTLEKEHNiFQNKMHVSYQETQQMQmkfeQVREQMEAEIAHLKQENGI 430
Cdd:PRK10929 19 AATAPDEKQITQEL---EQAKAAKTPAQAEIVEALQSALN-WLEERKGSLERAKQYQ----QVIDNFPKLSAELRQQLNN 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 431 LRDAVSNttnqLESKQSAelNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRT 510
Cdd:PRK10929 91 ERDEPRS----VPPNMST--DALEQEILQVSSQLLEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQLNEIERRLQTLG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 511 AEHEAAQQdlqSKFVAKENEVQSLHSKLtdtlvskQQLEqrLMQLmeSEQKRasQEES-MQIQVQDilEQNEALKAQIQQ 589
Cdd:PRK10929 165 TPNTPLAQ---AQLTALQAESAALKALV-------DELE--LAQL--SANNR--QELArLRSELAK--KRSQQLDAYLQA 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 590 FHSQIAAQ---------TSASVLAE---ELHKVIAE---KDKQLKQTEDSLASEQDHLASKE-QELKDVQNVNFLLKA-- 651
Cdd:PRK10929 227 LRNQLNSQrqreaeralESTELLAEqsgDLPKSIVAqfkINRELSQALNQQAQRMDLIASQQrQAASQTLQVRQALNTlr 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 652 -EVQKLQALAKEQAAAAHEVEK---MQKSvhvkddkirlleEQLQREVAS-RVEELK---ILNDQNKALQLEVQKLQAVV 723
Cdd:PRK10929 307 eQSQWLGVSNALGEALRAQVARlpeMPKP------------QQLDTEMAQlRVQRLRyedLLNKQPQLRQIRQADGQPLT 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 724 SEQpnkdvveqmkKCIQekDEKLRTVEELLETGLIQVATREEELNAIRTENSSLT---KEVQELKAKQMDQVPFVS---- 796
Cdd:PRK10929 375 AEQ----------NRIL--DAQLRTQRELLNSLLSGGDTLILELTKLKVANSQLEdalKEVNEATHRYLFWVADVSpisl 442
|
490
....*....|....
gi 672077858 797 -----LIEDLKKVI 805
Cdd:PRK10929 443 sypleIAQDLRRLL 456
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
733-1024 |
2.95e-06 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 51.47 E-value: 2.95e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 733 EQMKKC--IQEKDEKLRTVEELLETGLIQVATREEELNAIRTEN-SSLTKEVQELKAKQMDQVPFVSLIEDLKKVIHEKD 809
Cdd:PRK05771 4 VRMKKVliVTLKSYKDEVLEALHELGVVHIEDLKEELSNERLRKlRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKS 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 810 GQ--IKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIgnAQLEKAHQLSVtsqvqELQNLLRGKEEQVdsmkaaled 887
Cdd:PRK05771 84 LEelIKDVEEELEKIEKEIKELEEEISELENEIKELEQEI--ERLEPWGNFDL-----DLSLLLGFKYVSV--------- 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 888 LTGREKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKDtKSDLSKKAELLKEVQDENKlfksqveqlnhqnhqqaSFPS 967
Cdd:PRK05771 148 FVGTVPEDKLEELKLESDVENVEYISTDKGYVYVVVVVL-KELSDEVEEELKKLGFERL-----------------ELEE 209
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 968 QEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNERQQQVEAV---ELESKDLLKRL 1024
Cdd:PRK05771 210 EGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYleiELERAEALSKF 269
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
561-920 |
3.13e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 51.60 E-value: 3.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 561 KRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELK 640
Cdd:TIGR02168 664 GSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVE 743
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 641 DVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQREVASRVEELKILNDQNKALQLEVQKLQ 720
Cdd:TIGR02168 744 QLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLR 823
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 721 avvseqpnkdvvEQMKKCIQEKDEKLRTVEELLEtgliQVATREEELNAIRTENSSLTKEVQELKAKqmdqvpfvslIED 800
Cdd:TIGR02168 824 ------------ERLESLERRIAATERRLEDLEE----QIEELSEDIESLAAEIEELEELIEELESE----------LEA 877
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 801 LKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEKAhqlsvTSQVQELQNLLRGKEEQVDS 880
Cdd:TIGR02168 878 LLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLE-----GLEVRIDNLQERLSEEYSLT 952
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 672077858 881 MKAALEdltgrekcTQVCSTPRFEELENVLKEKDNEIKRI 920
Cdd:TIGR02168 953 LEEAEA--------LENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
291-977 |
9.96e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.07 E-value: 9.96e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 291 LSLKTMMFSEDEALCVVDLLKEKSGVIKEAlkksnKGELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKER 370
Cdd:TIGR02169 277 LNKKIKDLGEEEQLRVKEKIGELEAEIASL-----ERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKR 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 371 SSVVMARMKERIGTLEKEHNIFQN---KMHVSYQETQQMQMKFEQVREQME---AEIAHLKQENGILRDAVSNTTNQLES 444
Cdd:TIGR02169 352 RDKLTEEYAELKEELEDLRAELEEvdkEFAETRDELKDYREKLEKLKREINelkRELDRLQEELQRLSEELADLNAAIAG 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 445 KQsAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKF 524
Cdd:TIGR02169 432 IE-AKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGR 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 525 VAKE---NEVQSLHSKLT---------------------------DTLVSKQQLEQ--------------RLMQLMESEQ 560
Cdd:TIGR02169 511 AVEEvlkASIQGVHGTVAqlgsvgeryataievaagnrlnnvvveDDAVAKEAIELlkrrkagratflplNKMRDERRDL 590
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 561 KRASQEESMQIQV-----------------QD--ILEQNEALKAQIQQFH---------SQIAAQTSASVLAEELHKVIA 612
Cdd:TIGR02169 591 SILSEDGVIGFAVdlvefdpkyepafkyvfGDtlVVEDIEAARRLMGKYRmvtlegelfEKSGAMTGGSRAPRGGILFSR 670
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 613 EKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQ 692
Cdd:TIGR02169 671 SEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLE 750
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 693 REVASRVEELKILNDQNKALQLEVQKLQAVVSEQPNKDVVEQmkkcIQEKDEKLRTVEELLETGLIQVATREEELNAIRT 772
Cdd:TIGR02169 751 QEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSR----IPEIQAELSKLEEEVSRIEARLREIEQKLNRLTL 826
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 773 ENSSLTKEVQELKAKQMDqvpFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQL 852
Cdd:TIGR02169 827 EKEYLEKEIQELQEQRID---LKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELER 903
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 853 EKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVCsTPRFEELENVLKEKDNEIKRIEAI--------- 923
Cdd:TIGR02169 904 KIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEE-ELSLEDVQAELQRVEEEIRALEPVnmlaiqeye 982
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 672077858 924 -LKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEELQTVISE 977
Cdd:TIGR02169 983 eVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREVFMEAFEAINENFNEIFAE 1037
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
444-644 |
1.26e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 444 SKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDL--Q 521
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELeaQ 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 522 SKFVAKENEVQSLHSKLTDTLV-----SKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAA 596
Cdd:COG4942 103 KEELAELLRALYRLGRQPPLALllspeDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAE 182
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 672077858 597 QTSAsvlAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQN 644
Cdd:COG4942 183 LEEE---RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
902-1195 |
1.39e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.55 E-value: 1.39e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 902 RFEELENVLKEKDNEIKRIEaiLKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASfpSQEELQTVISEKEKE 981
Cdd:COG1196 214 RYRELKEELKELEAELLLLK--LRELEAELEELEAELEELEAELEELEAELAELEAELEELRL--ELEELELELEEAQAE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 982 ITDLCNELESLKNAVEHQRKKNNERQQQVEAVELESKDLLKRLfpavsVPSHSNYSEWLRSFEKKAKACMAgpSDTEAVK 1061
Cdd:COG1196 290 EYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEEL-----EELEEELEELEEELEEAEEELEE--AEAELAE 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1062 VLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQR--SVEQEESKWKVKAEESRRTIQQLRREREHLEIELEKAEV 1139
Cdd:COG1196 363 AEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQleELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEE 442
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 672077858 1140 ERSTYVMEVRELKTQLNETHSKLQNEQTERKKVADDLHKAQQSLNFIHSKISLKAA 1195
Cdd:COG1196 443 ALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLE 498
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
849-1181 |
1.77e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 49.28 E-value: 1.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 849 NAQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVcstpRFEELENVLKEKDNEIKRIEAILKDTK 928
Cdd:TIGR02168 219 KAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEE----KLEELRLEVSELEEEIEELQKELYALA 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 929 SDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASfpSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNERQQ 1008
Cdd:TIGR02168 295 NEISRLEQQKQILRERLANLERQLEELEAQLEELES--KLDELAEELAELEEKLEELKEELESLEAELEELEAELEELES 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1009 QVEAVELESKDLLKRLFPAVsvpshsnysewlrsfEKKAKAcmagpsdTEAVKVLEHRLKEANEMHTLLQLECEKYKSVL 1088
Cdd:TIGR02168 373 RLEELEEQLETLRSKVAQLE---------------LQIASL-------NNEIERLEARLERLEDRRERLQQEIEELLKKL 430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1089 AETEgiLQKLQRSVEQEESKWKVKAEESRRTIQQLRREREhleiELEKAEVERSTYVMEVRELKTQLNETHSKLQNEQTE 1168
Cdd:TIGR02168 431 EEAE--LKELQAELEELEEELEELQEELERLEEALEELRE----ELEEAEQALDAAERELAQLQARLDSLERLQENLEGF 504
|
330
....*....|...
gi 672077858 1169 RKKVADDLHKAQQ 1181
Cdd:TIGR02168 505 SEGVKALLKNQSG 517
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
308-808 |
2.12e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 48.86 E-value: 2.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 308 DLLKEKSGVIKEALKKSNKgeLSGLLHQLQEKERLLTATKedaaATKERCKQLTQEMMTEKERSSVvmarMKERIGTLEK 387
Cdd:TIGR04523 170 ELENELNLLEKEKLNIQKN--IDKIKNKLLKLELLLSNLK----KKIQKNKSLESQISELKKQNNQ----LKDNIEKKQQ 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 388 EHNIFQNKMHVSYQETQQMQMKFEQVREQMEAEIAHLKQENGILRDaVSNTTNQLESKQSAELNKLRQDCGRLV-SELNE 466
Cdd:TIGR04523 240 EINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKE-LEKQLNQLKSEISDLNNQKEQDWNKELkSELKN 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 467 KTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKfvakENEVQSLHSKLTDTLVSKQ 546
Cdd:TIGR04523 319 QEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKL----KKENQSYKQEIKNLESQIN 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 547 QLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIA----AQTSASVLAEELHKVIAEKDKQLKQTE 622
Cdd:TIGR04523 395 DLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKdltnQDSVKELIIKNLDNTRESLETQLKVLS 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 623 DSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKeqaaaahEVEKMQKSVHVKDDKIRLLEEQLQREVASRVEEL 702
Cdd:TIGR04523 475 RSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVK-------DLTKKISSLKEKIEKLESEKKEKESKISDLEDEL 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 703 KILNDQNKALQLE--VQKLQAVVSEQPN-----KDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENS 775
Cdd:TIGR04523 548 NKDDFELKKENLEkeIDEKNKEIEELKQtqkslKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENE 627
|
490 500 510
....*....|....*....|....*....|...
gi 672077858 776 SLTKEVQELKAKQMDQVPFVSLIEDLKKVIHEK 808
Cdd:TIGR04523 628 KLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNK 660
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
418-956 |
3.36e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 48.14 E-value: 3.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 418 EAEIAHLKQENGILRDAVSNTTNQLESKQ---SAELNKLRqdcgRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQE 494
Cdd:PRK03918 188 TENIEELIKEKEKELEEVLREINEISSELpelREELEKLE----KEVKELEELKEEIEELEKELESLEGSKRKLEEKIRE 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 495 AERRWEEVqsyiRKRTAEHEAAQQDLQS-KFVAKE-NEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQ 572
Cdd:PRK03918 264 LEERIEEL----KKEIEELEEKVKELKElKEKAEEyIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEER 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 573 VQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKViaeKDKQLKQTEDSLASEQDHLASKEQELKDVQNVnflLKAE 652
Cdd:PRK03918 340 LEELKKKLKELEKRLEELEERHELYEEAKAKKEELERL---KKRLTGLTPEKLEKELEELEKAKEEIEEEISK---ITAR 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 653 VQKLQALAKEQAAAAHEVEKMQKSVHV------KDDKIRLLEEQLqREVASRVEELKILNDQNKALQLEVQKLQAVVSEQ 726
Cdd:PRK03918 414 IGELKKEIKELKKAIEELKKAKGKCPVcgreltEEHRKELLEEYT-AELKRIEKELKEIEEKERKLRKELRELEKVLKKE 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 727 PNKDVVEQMKKCIQEKDEKLRTVE-ELLETGLIQVATREEELNAIRTENSSLTKEVQELKAkqmdqvpfvsLIEDLKKVI 805
Cdd:PRK03918 493 SELIKLKELAEQLKELEEKLKKYNlEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEE----------LKKKLAELE 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 806 HEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAAL 885
Cdd:PRK03918 563 KKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRL 642
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 672077858 886 EDLTGR-EKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKDTKS---DLSKKAELLKEVQDENKLFKSQVEQLN 956
Cdd:PRK03918 643 EELRKElEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKrreEIKKTLEKLKEELEEREKAKKELEKLE 717
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
545-863 |
4.42e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 48.14 E-value: 4.42e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 545 KQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAaqtsasvlaeELHKVIAEKDKQLKQTEDS 624
Cdd:TIGR02169 197 RQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLA----------SLEEELEKLTEEISELEKR 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 625 LASEQDHLASKEQELKDVQNVNFL-LKAEVQKLQAlakeqaaaahEVEKMQKSVHVKDDKIRLLEEQLQR---EVASRVE 700
Cdd:TIGR02169 267 LEEIEQLLEELNKKIKDLGEEEQLrVKEKIGELEA----------EIASLERSIAEKERELEDAEERLAKleaEIDKLLA 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 701 ELKILNDQNKALQLEVQKLQAVVSEQpnKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKE 780
Cdd:TIGR02169 337 EIEELEREIEEERKRRDKLTEEYAEL--KEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEE 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 781 VQELKAKQMD-----------QVPFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIgn 849
Cdd:TIGR02169 415 LQRLSEELADlnaaiagieakINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQREL-- 492
|
330
....*....|....
gi 672077858 850 AQLEKAHQLSVTSQ 863
Cdd:TIGR02169 493 AEAEAQARASEERV 506
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
482-1181 |
5.01e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 47.66 E-value: 5.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 482 EQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQslhsKLTDTLVSKQQLEQRLMQLMESEQK 561
Cdd:TIGR00618 179 TQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELK----HLREALQQTQQSHAYLTQKREAQEE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 562 RASQEESMQiQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELhKVIAEKDKQLKQTEDSLASEQDHLASKEQELKD 641
Cdd:TIGR00618 255 QLKKQQLLK-QLRARIEELRAQEAVLEETQERINRARKAAPLAAHI-KAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAA 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 642 VQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEE--QLQREVASRVEELKILndqnKALQLEVQKL 719
Cdd:TIGR00618 333 HVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHihTLQQQKTTLTQKLQSL----CKELDILQRE 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 720 QAVVSEQPNKDVVEQMKKCIQEKDEKLRtveelLETGLIQVATREEELNAIRTENSSLTKEVQELKAK--QMDQVPFVSL 797
Cdd:TIGR00618 409 QATIDTRTSAFRDLQGQLAHAKKQQELQ-----QRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEReqQLQTKEQIHL 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 798 IEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEI--GNAQLEKAHQlSVTSQVQELQNLLRGKE 875
Cdd:TIGR00618 484 QETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGeqTYAQLETSEE-DVYHQLTSERKQRASLK 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 876 EQVDSMKAALEDLTgrekctqVCSTPRFEELENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDE-NKLFKSQVEQ 954
Cdd:TIGR00618 563 EQMQEIQQSFSILT-------QCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEqDLQDVRLHLQ 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 955 LNHQNHQQASFPSQEELQTVISEKEKEITDLCNELESLK---NAVEHQRKKNNERQQQVEAVELESKDLLKRLFPAVSVP 1031
Cdd:TIGR00618 636 QCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELlasRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEE 715
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1032 SHSNYSEW-LRSFEKKAKACMAGPSDTEAVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWK 1110
Cdd:TIGR00618 716 YDREFNEIeNASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLRE 795
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 672077858 1111 VKAEESRRTIQQLRREREHLEIELEkaeVERSTYVMEVRELKTQLNETHSKLQNEQTERKKVADDLHKAQQ 1181
Cdd:TIGR00618 796 EDTHLLKTLEAEIGQEIPSDEDILN---LQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQ 863
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
386-1206 |
6.17e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 47.35 E-value: 6.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 386 EKEHNIFQNKMHVSYQET-QQMQMKFEQVREQMEAEIAHLKQENGI---LRDAVSNTTNQLESKQ------SAELNKLRQ 455
Cdd:TIGR00606 173 QKFDEIFSATRYIKALETlRQVRQTQGQKVQEHQMELKYLKQYKEKaceIRDQITSKEAQLESSReivksyENELDPLKN 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 456 DCGRlVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQE--------AERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAK 527
Cdd:TIGR00606 253 RLKE-IEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELkmekvfqgTDEQLNDLYHNHQRTVREKERELVDCQRELEKL 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 528 ENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQ-DILEQNEALKAQIQQFHSQIAAQTS-----AS 601
Cdd:TIGR00606 332 NKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLElDGFERGPFSERQIKNFHTLVIERQEdeaktAA 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 602 VLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHvKD 681
Cdd:TIGR00606 412 QLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELS-KA 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 682 DKIRLLEEQLQREVASRVEELKILndqnKALQLEVQKLQAVVSEQPNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVA 761
Cdd:TIGR00606 491 EKNSLTETLKKEVKSLQNEKADLD----RKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLL 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 762 TREEELNAIRTENSSLTKEVQELKAKQMDQVPFVSLIEDLKkviHEKDGQIKSVEELLEVELLKVANKEKTvQALKQEIE 841
Cdd:TIGR00606 567 GYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNK---NHINNELESKEEQLSSYEDKLFDVCGS-QDEESDLE 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 842 ILKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKE-------EQVDSMKAALEDLTGREKCTQVCSTPRFEELENVLKEKD 914
Cdd:TIGR00606 643 RLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENqsccpvcQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKE 722
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 915 NEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQ--------ASFPSQEELQTVIS---------- 976
Cdd:TIGR00606 723 KRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQetllgtimPEEESAKVCLTDVTimerfqmelk 802
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 977 EKEKEITDLCNELES--LKNAVEHQRKKNNERQQQVEAVELESkDLLKRLFPAVSVPSHSNYSEWLRSFEKKAKACMAGP 1054
Cdd:TIGR00606 803 DVERKIAQQAAKLQGsdLDRTVQQVNQEKQEKQHELDTVVSKI-ELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQ 881
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1055 SDTEAVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKVKAEESRRTIQQLRREREHLEIEL 1134
Cdd:TIGR00606 882 RRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIE 961
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 672077858 1135 EKAEVERSTYVMEVrelKTQLNETHSKLQNEQTERKKVADDLHKAQQSLNFIHSKISLKAAGDTVVIENNDI 1206
Cdd:TIGR00606 962 NKIQDGKDDYLKQK---ETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENEL 1030
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
479-639 |
8.19e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 47.25 E-value: 8.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 479 KNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSkfvakENEVQSLHskltdtlvskQQLEQRLMQLmeS 558
Cdd:COG3096 508 QALAQRLQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDA-----AEELEELL----------AELEAQLEEL--E 570
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 559 EQKRASQEESMQIQvqdilEQNEALKAQIQQFHSQ----IAAQTSASVLAEELHKVIA-------------EKDKQLKQT 621
Cdd:COG3096 571 EQAAEAVEQRSELR-----QQLEQLRARIKELAARapawLAAQDALERLREQSGEALAdsqevtaamqqllEREREATVE 645
|
170
....*....|....*...
gi 672077858 622 EDSLASEQDHLASKEQEL 639
Cdd:COG3096 646 RDELAARKQALESQIERL 663
|
|
| Golgin_A5 |
pfam09787 |
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining ... |
399-599 |
1.18e-04 |
|
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1.
Pssm-ID: 462900 [Multi-domain] Cd Length: 305 Bit Score: 45.52 E-value: 1.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 399 SYQETQQMQMKFEQVREQMEAEIAHLKQENGiLRDAVSNTTNQLESKQS--------AELNKLRQDCGRLVSELNEKTGK 470
Cdd:pfam09787 5 AKQELADYKQKAARILQSKEKLIASLKEGSG-VEGLDSSTALTLELEELrqerdllrEEIQKLRGQIQQLRTELQELEAQ 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 471 LQQEGVQkknAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDL-------QSKFVAKENEVQSLHSKLTD--- 540
Cdd:pfam09787 84 QQEEAES---SREQLQELEEQLATERSARREAEAELERLQEELRYLEEELrrskatlQSRIKDREAEIEKLRNQLTSksq 160
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 672077858 541 TLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTS 599
Cdd:pfam09787 161 SSSSQSELENRLHQLTETLIQKQTMLEALSTEKNSLVLQLERMEQQIKELQGEGSNGTS 219
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
669-1166 |
1.55e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 45.91 E-value: 1.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 669 EVEKMQKSVHVKDDKIRLLEEQLQREVASRVEELKILNDQNKALQLEVQKLQAVVseqpnkdvvEQMKKCIQEKDEKLRT 748
Cdd:COG4717 50 RLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEEL---------EELEAELEELREELEK 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 749 VEELLetgliQVATREEELNAIRTENSSLTKEVQELKAKQMDQVPFVSLIEDLKKVIHEKDGQIKSVEELLEVEllkvan 828
Cdd:COG4717 121 LEKLL-----QLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLA------ 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 829 KEKTVQALKQEIEILKEEIGNAQlekahqlsvtSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVCSTPR-FEELE 907
Cdd:COG4717 190 TEEELQDLAEELEELQQRLAELE----------EELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLiAAALL 259
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 908 NVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASfpSQEELQTVISEKEKEITDLCN 987
Cdd:COG4717 260 ALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEEL--EEEELEELLAALGLPPDLSPE 337
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 988 ELESLKNAVEHQRKKNNERQQQVEAVELES-KDLLKRLFPAVSVPSHSNYSEWLRSFEKKAKAcmagpsdTEAVKVLEHR 1066
Cdd:COG4717 338 ELLELLDRIEELQELLREAEELEEELQLEElEQEIAALLAEAGVEDEEELRAALEQAEEYQEL-------KEELEELEEQ 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1067 LKEANE--MHTLLQLECEKYKSVLAETEGILQKLQRSVEQ-----EESKWKVKAEESRRTIQQLRREREHLEIELEKAEV 1139
Cdd:COG4717 411 LEELLGelEELLEALDEEELEEELEELEEELEELEEELEElreelAELEAELEQLEEDGELAELLQELEELKAELRELAE 490
|
490 500
....*....|....*....|....*..
gi 672077858 1140 ERSTYVMevreLKTQLNETHSKLQNEQ 1166
Cdd:COG4717 491 EWAALKL----ALELLEEAREEYREER 513
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
611-1189 |
1.80e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 45.78 E-value: 1.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 611 IAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLL--- 687
Cdd:TIGR04523 126 LNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLlsn 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 688 ---EEQLQREVASRVEELKilnDQNKALQLEVQKLQAVVSEQPNKdvveqmkkcIQEKDEKLRTVEELLETGLIQVATRE 764
Cdd:TIGR04523 206 lkkKIQKNKSLESQISELK---KQNNQLKDNIEKKQQEINEKTTE---------ISNTQTQLNQLKDEQNKIKKQLSEKQ 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 765 EELNAIRTENSSLTKEVQELKAKqmdqvpfvslIEDLKKV-----IHEKDGQIKSVEELLEVELLKVANKEKTVQALKQE 839
Cdd:TIGR04523 274 KELEQNNKKIKELEKQLNQLKSE----------ISDLNNQkeqdwNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQ 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 840 IEILKEEIGNAQLEKahqLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREkctqvcstprfEELENVLKEKDNEIKR 919
Cdd:TIGR04523 344 ISQLKKELTNSESEN---SEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQI-----------NDLESKIQNQEKLNQQ 409
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 920 IEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASfpSQEELQTVISEKEKEITDLCNELESLKNAVEHQ 999
Cdd:TIGR04523 410 KDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKEL--IIKNLDNTRESLETQLKVLSRSINKIKQNLEQK 487
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1000 RKKNNERQQQVEAVELESKDLLKRLFPAVSVPSHSNYSEWLRSFEKKAKacmagpsdTEAVKVLEHRLKEANEMHTLLQL 1079
Cdd:TIGR04523 488 QKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEK--------ESKISDLEDELNKDDFELKKENL 559
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1080 ECEKYKsvlaetegiLQKLQRSVEQEESKWKVKAEESRRTIQQLRREREHLEIELEKAEVERSTYVMEVRELKTQLNETH 1159
Cdd:TIGR04523 560 EKEIDE---------KNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLS 630
|
570 580 590
....*....|....*....|....*....|
gi 672077858 1160 SKLQNEQTERKKVADDLHKAQQSLNFIHSK 1189
Cdd:TIGR04523 631 SIIKNIKSKKNKLKQEVKQIKETIKEIRNK 660
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
603-1190 |
1.85e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 46.05 E-value: 1.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 603 LAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQ---ELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQ---KS 676
Cdd:PRK01156 188 LEEKLKSSNLELENIKKQIADDEKSHSITLKEIERlsiEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAEsdlSM 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 677 VHVKDDKIRLLEEQLQR-----EVASRVEELKILNDQNKALQLevqklqavvseqpnKDVVEQMKKCIQEKDEKLRTVEE 751
Cdd:PRK01156 268 ELEKNNYYKELEERHMKiindpVYKNRNYINDYFKYKNDIENK--------------KQILSNIDAEINKYHAIIKKLSV 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 752 LletgliqvATREEELNAIRTENSSLTKEVQELKAKQMDQVPFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEK 831
Cdd:PRK01156 334 L--------QKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPD 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 832 TVQALKQEIEILKEEIgnaqlekahqlsvTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTqVCSTPRFEE-LENVL 910
Cdd:PRK01156 406 AIKKELNEINVKLQDI-------------SSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCP-VCGTTLGEEkSNHII 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 911 KEKDNEIKRIEAILKDTKSDLSKKAELLKEVQD-ENKLFKSQVEQLNHQNHQqasfpsqeelqtvISEKEKEITDLCNEL 989
Cdd:PRK01156 472 NHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKrKEYLESEEINKSINEYNK-------------IESARADLEDIKIKI 538
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 990 ESLKNAvehqRKKNNERQQQVEAVELESKDllkrlfpavsvpshSNYSEWLRSFEKKAKAcmagpsDTEAV-KVLEHRLK 1068
Cdd:PRK01156 539 NELKDK----HDKYEEIKNRYKSLKLEDLD--------------SKRTSWLNALAVISLI------DIETNrSRSNEIKK 594
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1069 EANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKvKAEESRRTIQQLRREREHLEIElekaeverstyVMEV 1148
Cdd:PRK01156 595 QLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYN-EIQENKILIEKLRGKIDNYKKQ-----------IAEI 662
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 672077858 1149 RELKTQLNETHSKLQNEQTERKKVADDLHKAQQSLNFIHSKI 1190
Cdd:PRK01156 663 DSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTI 704
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
470-755 |
2.13e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 45.66 E-value: 2.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 470 KLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLhsKLTDTLVSKQQLE 549
Cdd:PLN02939 64 KLQSNTDENGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDF--QLEDLVGMIQNAE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 550 QRLMQLmesEQKRASQEEsmqiQVQDILEQNEALKAQIQQFHSQIAAQTSASVLA--EELHKVIAEK--DKQLKQTEDSL 625
Cdd:PLN02939 142 KNILLL---NQARLQALE----DLEKILTEKEALQGKINILEMRLSETDARIKLAaqEKIHVEILEEqlEKLRNELLIRG 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 626 ASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLqreVASRVEELKIL 705
Cdd:PLN02939 215 ATEGLCVHSLSKELDVLKEENMLLKDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKF---IVAQEDVSKLS 291
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 672077858 706 NDQNKALQLEVQKLQAVVSEQPNKdvVEQMKKCIQEKDEKLRTVEELLET 755
Cdd:PLN02939 292 PLQYDCWWEKVENLQDLLDRATNQ--VEKAALVLDQNQDLRDKVDKLEAS 339
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
413-590 |
3.27e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.01 E-value: 3.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 413 VREQMEAEIAHLKQENGILRDAVSNTTNQLESKQsAELNKLRQDCGrlVSELNEKTGKLQQegvQKKNAEQAAAQLKVQL 492
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAE-AALEEFRQKNG--LVDLSEEAKLLLQ---QLSELESQLAEARAEL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 493 QEAERRWEEVQSYI-------------------RKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLM 553
Cdd:COG3206 236 AEAEARLAALRAQLgsgpdalpellqspviqqlRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRIL 315
|
170 180 190
....*....|....*....|....*....|....*..
gi 672077858 554 QLMESEQkrasqeESMQIQVQDILEQNEALKAQIQQF 590
Cdd:COG3206 316 ASLEAEL------EALQAREASLQAQLAQLEARLAEL 346
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
426-855 |
5.15e-04 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 43.90 E-value: 5.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 426 QENGILRDAVSNTTNQLEskqsaELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERrweevqsy 505
Cdd:pfam19220 3 QRNELLRVRLGEMADRLE-----DLRSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERAAYGKLRR-------- 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 506 irkrtaeheaaqqdlqskfvakenEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKA 585
Cdd:pfam19220 70 ------------------------ELAGLTRRLSAAEGELEELVARLAKLEAALREAEAAKEELRIELRDKTAQAEALER 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 586 QIQQFHSQIAAqtsasvLAEELhkviAEKDKQLKQTEDSLASeqdhlasKEQELKDVQNVNFLLKAEVQKLQALAKEQAA 665
Cdd:pfam19220 126 QLAAETEQNRA------LEEEN----KALREEAQAAEKALQR-------AEGELATARERLALLEQENRRLQALSEEQAA 188
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 666 AAHEVEK----MQKSVHVKDDKIRLLEEQLQREVASRVEELKILNDQNKALQLEV----QKLQAVVSEQPNKDVV-EQMK 736
Cdd:pfam19220 189 ELAELTRrlaeLETQLDATRARLRALEGQLAAEQAERERAEAQLEEAVEAHRAERaslrMKLEALTARAAATEQLlAEAR 268
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 737 KCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDqvpFVSLIEDLKKVIHEKDGQIKSVE 816
Cdd:pfam19220 269 NQLRDRDEAIRAAERRLKEASIERDTLERRLAGLEADLERRTQQFQEMQRARAE---LEERAEMLTKALAAKDAALERAE 345
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 672077858 817 ELLEVELLKVANKEKTV----QALKQEIEILKEEIGNAQLEKA 855
Cdd:pfam19220 346 ERIASLSDRIAELTKRFeverAALEQANRRLKEELQRERAERA 388
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
477-686 |
5.20e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.98 E-value: 5.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 477 QKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQ---DLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLM 553
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERriaALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 554 QLME--SEQKRASQEESMQIQVQDILEQ----------------NEALKAQIQQFHSQIAA----QTSASVLAEELHKVI 611
Cdd:COG4942 101 AQKEelAELLRALYRLGRQPPLALLLSPedfldavrrlqylkylAPARREQAEELRADLAElaalRAELEAERAELEALL 180
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 672077858 612 AEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRL 686
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGKL 255
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
437-726 |
5.93e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.96 E-value: 5.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 437 NTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQ---EAERRWEEVQSYIRKRtaEH 513
Cdd:pfam17380 285 SERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERmamERERELERIRQEERKR--EL 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 514 EAAQQDLQSKFVAKENEVQSLHskltdtlVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQiQQFHSQ 593
Cdd:pfam17380 363 ERIRQEEIAMEISRMRELERLQ-------MERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAE-QEEARQ 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 594 IAAQTSASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASK--------EQELKDVQNVNFL---LKAEVQKLQALAKE 662
Cdd:pfam17380 435 REVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKlelekekrDRKRAEEQRRKILekeLEERKQAMIEEERK 514
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 672077858 663 QAAAAHEVEKMQKSVHvKDDKIRLLEEQLQREVasRVEELKILNDQNKALQLEVQKLQAVVSEQ 726
Cdd:pfam17380 515 RKLLEKEMEERQKAIY-EEERRREAEEERRKQQ--EMEERRRIQEQMRKATEERSRLEAMERER 575
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
798-1002 |
5.97e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 5.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 798 IEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEKAH-QLSVTSQVQELQNLLRG--K 874
Cdd:COG4942 36 IAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAElRAELEAQKEELAELLRAlyR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 875 EEQVDSMKAAL--EDLTGREKCTQVcstprFEELENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQV 952
Cdd:COG4942 116 LGRQPPLALLLspEDFLDAVRRLQY-----LKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAAL 190
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 672077858 953 EQL-NHQNHQQASFPSQE-ELQTVISEKEKEITDLCNELESLKNAVEHQRKK 1002
Cdd:COG4942 191 EALkAERQKLLARLEKELaELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
414-655 |
7.56e-04 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 44.05 E-value: 7.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 414 REQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNK--------LRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAA 485
Cdd:NF012221 1564 KERAEADRQRLEQEKQQQLAAISGSQSQLESTDQNALETngqaqrdaILEESRAVTKELTTLAQGLDALDSQATYAGESG 1643
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 486 AQLKVQLqeAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKlTDTLVskQQLEQRLMQLMESEQKRASQ 565
Cdd:NF012221 1644 DQWRNPF--AGGLLDRVQEQLDDAKKISGKQLADAKQRHVDNQQKVKDAVAK-SEAGV--AQGEQNQANAEQDIDDAKAD 1718
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 566 EESMQIQVqdILEQNEALKAQIQQFHS----QIAAQTSASVLAEELHKVIAEKdKQLKQTEDSLASEQ----DHLASKEQ 637
Cdd:NF012221 1719 AEKRKDDA--LAKQNEAQQAESDANAAandaQSRGEQDASAAENKANQAQADA-KGAKQDESDKPNRQgaagSGLSGKAY 1795
|
250
....*....|....*...
gi 672077858 638 ELKDVQNVNFLLKAEVQK 655
Cdd:NF012221 1796 SVEGVAEPGSHINPDSPA 1813
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
411-599 |
8.33e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.47 E-value: 8.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 411 EQVREQM---EAEIAHLKQENGILrdAVSNTTNQLESKQS---AELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQA 484
Cdd:COG3206 185 PELRKELeeaEAALEEFRQKNGLV--DLSEEAKLLLQQLSeleSQLAEARAELAEAEARLAALRAQLGSGPDALPELLQS 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 485 AA--QLKVQLQEAERRWEE-----------VQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQR 551
Cdd:COG3206 263 PViqQLRAQLAELEAELAElsarytpnhpdVIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEAR 342
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 672077858 552 LMQLMESEQKRASQEESMQIQvQDILEQneaLKAQIQQFHSQIAAQTS 599
Cdd:COG3206 343 LAELPELEAELRRLEREVEVA-RELYES---LLQRLEEARLAEALTVG 386
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
322-534 |
8.53e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 8.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 322 KKSNKGELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMmtekerssvvmARMKERIGTLEKEHNIFQNKMHVSYQ 401
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRI-----------AALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 402 ETQQMQMKFEQVREQMEAEIAHLKQENGI-----------LRDAVSNTT--NQLESKQSAELNKLRQDcgrlVSELNEKT 468
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALYRLGRQpplalllspedFLDAVRRLQylKYLAPARREQAEELRAD----LAELAALR 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 672077858 469 GKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSL 534
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARL 232
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
414-534 |
9.37e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.75 E-value: 9.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 414 REQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDCGRLVSELNEKTGK-------LQQEGVQKKNAEQAAA 486
Cdd:COG4913 304 LARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRrarlealLAALGLPLPASAEEFA 383
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 672077858 487 QLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSL 534
Cdd:COG4913 384 ALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASL 431
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
759-1178 |
9.71e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 43.47 E-value: 9.71e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 759 QVATREEELNAIRTENSSLTKEVQELKAKQMDQVPFVSLIEDLKKVIHEKDG----QIKSVEELLEVELLKVANKEKTVQ 834
Cdd:TIGR04523 111 EIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNdlkkQKEELENELNLLEKEKLNIQKNID 190
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 835 ALKQEIEILKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVCSTPRFEELENV---LK 911
Cdd:TIGR04523 191 KIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIkkqLS 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 912 EKDNEIKRIEAILKDTKSDLSK-KAELL----KEVQDENKLFKSQVEQLNHQnhqqasfpsQEELQTVISEKEKEITDLC 986
Cdd:TIGR04523 271 EKQKELEQNNKKIKELEKQLNQlKSEISdlnnQKEQDWNKELKSELKNQEKK---------LEEIQNQISQNNKIISQLN 341
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 987 NELESLKNAVEHQRKKNNERQQQVEAVELESKDLLKRlfpavsvpsHSNYSEWLRSFEKKAKAcmagpsdteavkvLEHR 1066
Cdd:TIGR04523 342 EQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKE---------NQSYKQEIKNLESQIND-------------LESK 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1067 LKEANEMHTLLQLECEKyksvlaetegiLQKLQRSVEQEESKWKVKAEESRRTIQQLRREREHLEIELEKAEVERSTYVM 1146
Cdd:TIGR04523 400 IQNQEKLNQQKDEQIKK-----------LQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLET 468
|
410 420 430
....*....|....*....|....*....|..
gi 672077858 1147 EVRELKTQLNETHSKLQNEQTERKKVADDLHK 1178
Cdd:TIGR04523 469 QLKVLSRSINKIKQNLEQKQKELKSKEKELKK 500
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
462-643 |
1.01e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.89 E-value: 1.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 462 SELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQskfvAKENEVQSLHSKLTDT 541
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIA----EAEAEIEERREELGER 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 542 LVSKQQ---LEQRLMQLMESEQ-----KRASQEESMQIQVQDILEQNEALKAQIQQFHSQI--------AAQTSASVLAE 605
Cdd:COG3883 92 ARALYRsggSVSYLDVLLGSESfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELeaklaeleALKAELEAAKA 171
|
170 180 190
....*....|....*....|....*....|....*...
gi 672077858 606 ELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQ 643
Cdd:COG3883 172 ELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAE 209
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
386-1157 |
1.08e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 43.17 E-value: 1.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 386 EKEHNIFQNKMHVSYQET--QQMQMKFEQVREQMEAEIAHLK---QENGILRDAVS--NTTNQLESKQSAELNKLRQDCG 458
Cdd:pfam05483 103 QKENKLQENRKIIEAQRKaiQELQFENEKVSLKLEEEIQENKdliKENNATRHLCNllKETCARSAEKTKKYEYEREETR 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 459 RLVSELNEKTGKLQQEGVQ-KKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSK 537
Cdd:pfam05483 183 QVYMDLNNNIEKMILAFEElRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFL 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 538 LTDTLVSKQQLEQR-------LMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIqqfhsQIAAQTsasvlaeeLHKV 610
Cdd:pfam05483 263 LEESRDKANQLEEKtklqdenLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDL-----QIATKT--------ICQL 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 611 IAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNvnfLLKAEVQKLQAlakeqaaaahevekmqksvhvKDDKIRLLEEQ 690
Cdd:pfam05483 330 TEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEE---LLRTEQQRLEK---------------------NEDQLKIITME 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 691 LQREVASRVEELKILNDQnkalQLEVQKLQAVVSE-QPNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNA 769
Cdd:pfam05483 386 LQKKSSELEEMTKFKNNK----EVELEELKKILAEdEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTA 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 770 IRTENSSLTKEVQELKAKQMDQvpfvsliedlkkvihekdgQIKSVEELLEVELLKVANKEKTVQALKQEIEILK--EEI 847
Cdd:pfam05483 462 IKTSEEHYLKEVEDLKTELEKE-------------------KLKNIELTAHCDKLLLENKELTQEASDMTLELKKhqEDI 522
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 848 GNAQLEKAHQLSVTSQVQELQNLLRgkeEQVDSMKAALEDLTGREKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKDT 927
Cdd:pfam05483 523 INCKKQEERMLKQIENLEEKEMNLR---DELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNL 599
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 928 KSDLSKKAELLKEVQDENKLFKSQVEQLNHQnhqqasfpsqeelqtvISEKEKEITDLCNELESLKNAVEhqrKKNNERQ 1007
Cdd:pfam05483 600 KKQIENKNKNIEELHQENKALKKKGSAENKQ----------------LNAYEIKVNKLELELASAKQKFE---EIIDNYQ 660
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1008 QQVEAVELESKDLLKRLFPAvsvpshsnysewlrsfekKAKACMAGPSDTEAVKVLEHRLKeanEMHTLLQLECEKYKSV 1087
Cdd:pfam05483 661 KEIEDKKISEEKLLEEVEKA------------------KAIADEAVKLQKEIDKRCQHKIA---EMVALMEKHKHQYDKI 719
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1088 LAETEGILqKLQRSVEQEESKWKVKAEESrrtIQQLRREREHLEIELEKAEVERSTYVMEVRELKTQLNE 1157
Cdd:pfam05483 720 IEERDSEL-GLYKNKEQEQSSAKAALEIE---LSNIKAELLSLKKQLEIEKEEKEKLKMEAKENTAILKD 785
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
594-754 |
1.24e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 42.92 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 594 IAAQTSASVLAEELHKVIAEKDKQlkqTEDSLASEQDHLASKEQELKDvqnvnflLKAEVQKLQalakeqaaaaHEVEKM 673
Cdd:COG2433 373 IRGLSIEEALEELIEKELPEEEPE---AEREKEHEERELTEEEEEIRR-------LEEQVERLE----------AEVEEL 432
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 674 QKSVHVKDDKIRLLEEQLQRevASRVEELKILNDQnkalqlEVQKLQAvvseqpnkdVVEQMKKCIQEKDEKLRTVEELL 753
Cdd:COG2433 433 EAELEEKDERIERLERELSE--ARSEERREIRKDR------EISRLDR---------EIERLERELEEERERIEELKRKL 495
|
.
gi 672077858 754 E 754
Cdd:COG2433 496 E 496
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
508-729 |
1.52e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 1.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 508 KRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQI 587
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 588 QQFHSQIAAQTSASVLAEELHKV--------IAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQAL 659
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLalllspedFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 660 AKEQAAAAHEVEKMQKSVhvkddkiRLLEEQLQREVASRVEELKILNDQNKALQLEVQKLQAVVSEQPNK 729
Cdd:COG4942 180 LAELEEERAALEALKAER-------QKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
739-940 |
1.53e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.45 E-value: 1.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 739 IQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQvpfVSLIEDLKKVIHEKDGQIKSveel 818
Cdd:COG1579 12 LQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRL---ELEIEEVEARIKKYEEQLGN---- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 819 levellkvANKEKTVQALKQEIEILKEEIgnAQLEKaHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTgrekctqvc 898
Cdd:COG1579 85 --------VRNNKEYEALQKEIESLKRRI--SDLED-EILELMERIEELEEELAELEAELAELEAELEEKK--------- 144
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 672077858 899 stprfEELENVLKEKDNEIKRIEAILKDTKSDLSkkAELLKE 940
Cdd:COG1579 145 -----AELDEELAELEAELEELEAEREELAAKIP--PELLAL 179
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
332-1024 |
1.93e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 42.65 E-value: 1.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 332 LLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKERSSVVMARMKERIGTLEKEhnifqnKMHVSYQETQQMQMKFE 411
Cdd:pfam02463 228 YLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQ------EEELKLLAKEEEELKSE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 412 QVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLK-- 489
Cdd:pfam02463 302 LLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKkl 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 490 --VQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEE 567
Cdd:pfam02463 382 esERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLL 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 568 SMqiQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVnf 647
Cdd:pfam02463 462 KD--ELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVA-- 537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 648 LLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQREVASRVEELKILNDQNKALQLEVQKLQAVVSEQP 727
Cdd:pfam02463 538 VENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADE 617
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 728 -NKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQVPFVSLIEDLKKVIH 806
Cdd:pfam02463 618 dDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRR 697
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 807 EKDGQIKSVEELLEVELLKVAnKEKTVQALKQEIEILKEEIGNAQLEKAHQLSvtsqvQELQNLLRGKEEQVDSMKAALE 886
Cdd:pfam02463 698 QLEIKKKEQREKEELKKLKLE-AEELLADRVQEAQDKINEELKLLKQKIDEEE-----EEEEKSRLKKEEKEEEKSELSL 771
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 887 DLTGREKCTqvcstpRFEELENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQ--QAS 964
Cdd:pfam02463 772 KEKELAEER------EKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALelKEE 845
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 965 FPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNERQQQVEAVELESKDLLKRL 1024
Cdd:pfam02463 846 QKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEE 905
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
477-596 |
2.63e-03 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 41.57 E-value: 2.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 477 QKKNAEQAAAQLKVQLQEAERRwEEVQSYIRKRTAEHEAAQQDLQskfvAKENEVQSLHSKLTDTLVSKQQLEQRLMQLM 556
Cdd:COG1566 84 ALAQAEAQLAAAEAQLARLEAE-LGAEAEIAAAEAQLAAAQAQLD----LAQRELERYQALYKKGAVSQQELDEARAALD 158
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 672077858 557 ESEQKRASQEESMQIQVQDILEQNE--ALKAQIQQFHSQIAA 596
Cdd:COG1566 159 AAQAQLEAAQAQLAQAQAGLREEEElaAAQAQVAQAEAALAQ 200
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
613-1024 |
2.69e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.06 E-value: 2.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 613 EKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAhEVEKMQKSVHVKDDKIRLLEEQLQ 692
Cdd:COG4717 78 EELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQ-ELEALEAELAELPERLEELEERLE 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 693 rEVASRVEELKILNDQNKALQLEVQKLQAVVSEQpNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRT 772
Cdd:COG4717 157 -ELRELEEELEELEAELAELQEELEELLEQLSLA-TEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLEN 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 773 ENSSLtKEVQELKAKQMDQVPFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQL 852
Cdd:COG4717 235 ELEAA-ALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPAL 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 853 EKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLtgREKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKDTKSDLS 932
Cdd:COG4717 314 EELEEEELEELLAALGLPPDLSPEELLELLDRIEEL--QELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAAL 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 933 KKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKEITDLCNELESLKNAVE--HQRKKNNERQQQV 1010
Cdd:COG4717 392 EQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEELREELAelEAELEQLEEDGEL 471
|
410
....*....|....
gi 672077858 1011 EAVELESKDLLKRL 1024
Cdd:COG4717 472 AELLQELEELKAEL 485
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
904-1171 |
2.72e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.67 E-value: 2.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 904 EELENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQnhqqasfpsQEELQTVISEKEKEIT 983
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQE---------LAALEAELAELEKEIA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 984 DLCNELESLKNAVehqrkknneRQQQVEAVELESKDLLKRLFPAVSVPSHSNYSEWLRSFekkakacmaGPSDTEAVKVL 1063
Cdd:COG4942 94 ELRAELEAQKEEL---------AELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYL---------APARREQAEEL 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1064 EHRLKEANEMHTLLQLECEKYKSVLAEtegilqklqrsveqeeskwkvkAEESRRTIQQLRREREHLEIELEKAEVERST 1143
Cdd:COG4942 156 RADLAELAALRAELEAERAELEALLAE----------------------LEEERAALEALKAERQKLLARLEKELAELAA 213
|
250 260
....*....|....*....|....*...
gi 672077858 1144 YVMEVRELKTQLNETHSKLQNEQTERKK 1171
Cdd:COG4942 214 ELAELQQEAEELEALIARLEAEAAAAAE 241
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
479-1011 |
3.72e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 3.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 479 KNAEQAAAQLKvQLQEAERRWEEVQSyIRKRTAEHEAAQQDLQSKFVAKEneVQSLHSKLTDTLVSKQQLEQRLMQLMES 558
Cdd:COG4913 242 EALEDAREQIE-LLEPIRELAERYAA-ARERLAELEYLRAALRLWFAQRR--LELLEAELEELRAELARLEAELERLEAR 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 559 EQKRASQEESMQIQVQDI-LEQNEALKAQIQQFHSQIAAQTSAsvlAEELHKVIAEKDKQLKQTEDSLASEQ----DHLA 633
Cdd:COG4913 318 LDALREELDELEAQIRGNgGDRLEQLEREIERLERELEERERR---RARLEALLAALGLPLPASAEEFAALRaeaaALLE 394
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 634 SKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRlleEQLQREVASRVEELKILNDqnkaLq 713
Cdd:COG4913 395 ALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALR---DALAEALGLDEAELPFVGE----L- 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 714 LEVQKLQA-----------------VVSEQPNKDVVEqmkkCIQEKDEKLRTVEELLETGLIQVATREEELNAI----RT 772
Cdd:COG4913 467 IEVRPEEErwrgaiervlggfaltlLVPPEHYAAALR----WVNRLHLRGRLVYERVRTGLPDPERPRLDPDSLagklDF 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 773 ENSSLTKEVQELKAKQMDqVPFVSLIEDLKKV---------------IHEKDGQ--IKSVEELLEVELLKVANKEKTVQA 835
Cdd:COG4913 543 KPHPFRAWLEAELGRRFD-YVCVDSPEELRRHpraitragqvkgngtRHEKDDRrrIRSRYVLGFDNRAKLAALEAELAE 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 836 LKQEIEILKEEIGNAQLE------KAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGrekctqvcSTPRFEELENV 909
Cdd:COG4913 622 LEEELAEAEERLEALEAEldalqeRREALQRLAEYSWDEIDVASAEREIAELEAELERLDA--------SSDDLAALEEQ 693
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 910 LKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEK-EKEItdlcne 988
Cdd:COG4913 694 LEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAvEREL------ 767
|
570 580
....*....|....*....|...
gi 672077858 989 LESLKNAVEHQRKKNNERQQQVE 1011
Cdd:COG4913 768 RENLEERIDALRARLNRAEEELE 790
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
442-887 |
4.26e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.29 E-value: 4.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 442 LESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYI-----RKRTAEHEAA 516
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELeelreELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 517 QQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDI-LEQNEALKAQIQQFHSQIA 595
Cdd:COG4717 127 LLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLsLATEEELQDLAEELEELQQ 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 596 AQTSASVLAEELHKVIAEKDKQLKQTEDSLASEQDhlaskEQELKDVQNVNFLLkAEVQKLQALAKEQAAAAHEVEKMQK 675
Cdd:COG4717 207 RLAELEEELEEAQEELEELEEELEQLENELEAAAL-----EERLKEARLLLLIA-AALLALLGLGGSLLSLILTIAGVLF 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 676 SVHVKDDKIRLLEEQLQREVASRVEELKILNDQNKALQLEVQKLQAV--VSEQPNKDVVEQMKKCIQEKDEKLRTVEELL 753
Cdd:COG4717 281 LVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAAlgLPPDLSPEELLELLDRIEELQELLREAEELE 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 754 ETglIQVATREEELNAIRTENSSLTKEVQELKAKQMDQvpFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEktV 833
Cdd:COG4717 361 EE--LQLEELEQEIAALLAEAGVEDEEELRAALEQAEE--YQELKEELEELEEQLEELLGELEELLEALDEEELEEE--L 434
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 672077858 834 QALKQEIEILKEEIGNAQLEKA---HQLSVTSQVQELQNLLRGKEEQVDSMKAALED 887
Cdd:COG4717 435 EELEEELEELEEELEELREELAeleAELEQLEEDGELAELLQELEELKAELRELAEE 491
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1053-1181 |
4.68e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.44 E-value: 4.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1053 GPSDTEAVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKwkVKAEESRRTIQQLRREREH--- 1129
Cdd:COG4913 605 GFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDE--IDVASAEREIAELEAELERlda 682
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 672077858 1130 -------LEIELEKAEVERSTYVMEVRELKTQLNETHSKLQNEQTERKKVADDLHKAQQ 1181
Cdd:COG4913 683 ssddlaaLEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAED 741
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
349-643 |
4.72e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.48 E-value: 4.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 349 DAAATKERCKQLTQEMMTEKERSSVVMAR----MKERIGTLEKEHNIFQ---NKMhvsyQETQQMQMKFEQVREQMEAEI 421
Cdd:COG3096 285 ERALELRRELFGARRQLAEEQYRLVEMAReleeLSARESDLEQDYQAASdhlNLV----QTALRQQEKIERYQEDLEELT 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 422 AHLKQENGILRDAVSNTTNQLESKQSAElnklrQDCGRLVSELNEKTGKL---QQEGVQKKNAEQAAAQLKVQLQEAERR 498
Cdd:COG3096 361 ERLEEQEEVVEEAAEQLAEAEARLEAAE-----EEVDSLKSQLADYQQALdvqQTRAIQYQQAVQALEKARALCGLPDLT 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 499 WEEVQSYIrkrtAEHEAAQQDLQSkfvakenEVQSLHSKLTDTLVSKQQLEQrLMQLME--------------------- 557
Cdd:COG3096 436 PENAEDYL----AAFRAKEQQATE-------EVLELEQKLSVADAARRQFEK-AYELVCkiageversqawqtarellrr 503
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 558 --SEQKRASQEESMQIQVQDI---LEQNEALKAQIQQFHSQIAAQTSAsvlAEELHKVIAEKDKQLKQTEDSLASEQDHL 632
Cdd:COG3096 504 yrSQQALAQRLQQLRAQLAELeqrLRQQQNAERLLEEFCQRIGQQLDA---AEELEELLAELEAQLEELEEQAAEAVEQR 580
|
330
....*....|.
gi 672077858 633 ASKEQELKDVQ 643
Cdd:COG3096 581 SELRQQLEQLR 591
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
323-528 |
5.10e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 41.26 E-value: 5.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 323 KSNKGELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKERssvVMARMKERIGTLEKEHNIFQNkMHVSYQE 402
Cdd:pfam15921 649 KDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNK---LKMQLKSAQSELEQTRNTLKS-MEGSDGH 724
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 403 TQQMQMKFEQVREQMEAEIAHLKQENGILRDAVSNTtNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAE 482
Cdd:pfam15921 725 AMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNA-NKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLK 803
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 672077858 483 QAAAQLKVQLQEAERRWEEVQSYIRKRtaEHEAAQQDLQSKFVAKE 528
Cdd:pfam15921 804 EKVANMEVALDKASLQFAECQDIIQRQ--EQESVRLKLQHTLDVKE 847
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
480-693 |
5.68e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.05 E-value: 5.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 480 NAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQ-----SKFVAKENEVQSLHSKLtdtlvskQQLEQRLMQ 554
Cdd:COG4913 607 DNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREalqrlAEYSWDEIDVASAEREI-------AELEAELER 679
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 555 LmeseqkRASQEESMQIQvqdilEQNEALKAQIQQFHSQIaaqtsasvlaEELHKVIAEKDKQLKQTEDSLASEQDHLAS 634
Cdd:COG4913 680 L------DASSDDLAALE-----EQLEELEAELEELEEEL----------DELKGEIGRLEKELEQAEEELDELQDRLEA 738
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 672077858 635 KEQElkDVQNVNFLLKAEVQKLQALAKEQAAaaheVEKMQKSVHVKDDKIRLLEEQLQR 693
Cdd:COG4913 739 AEDL--ARLELRALLEERFAAALGDAVEREL----RENLEERIDALRARLNRAEEELER 791
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
415-855 |
6.42e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.52 E-value: 6.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 415 EQMEAEIAHLKQENGILRDAvsntTNQLESKQsAELNKLRQDCGRLVSELNEKTGKLQQEGV--QKKNAEQAAAQLKVQL 492
Cdd:COG4717 74 KELEEELKEAEEKEEEYAEL----QEELEELE-EELEELEAELEELREELEKLEKLLQLLPLyqELEALEAELAELPERL 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 493 QEAERR---WEEVQSYIRKRTAEHEAAQQDLQSkfvAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESM 569
Cdd:COG4717 149 EELEERleeLRELEEELEELEAELAELQEELEE---LLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEEL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 570 QIQVQDILEQNEALKAQiqqfhSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLL 649
Cdd:COG4717 226 EEELEQLENELEAAALE-----ERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 650 KAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQREVASRVEELKILNDQNKALQLEV-QKLQAVVSEQPN 728
Cdd:COG4717 301 GKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEElEQEIAALLAEAG 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 729 KDVVEQMKKCIQEKDEKLRTVEELLE-TGLIQVATREEELNAIRTENSSLTKEVQELKAKQmdqvpfvSLIEDLKKVIHE 807
Cdd:COG4717 381 VEDEEELRAALEQAEEYQELKEELEElEEQLEELLGELEELLEALDEEELEEELEELEEEL-------EELEEELEELRE 453
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 672077858 808 KDGQIKSveelleveLLKVANKEKTVQALKQEIEILKEEIGNAQLEKA 855
Cdd:COG4717 454 ELAELEA--------ELEQLEEDGELAELLQELEELKAELRELAEEWA 493
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
903-1157 |
7.02e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.67 E-value: 7.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 903 FEELENVLKEKDnEIKRIEAILKDTKsdlsKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQ------EELQTVIS 976
Cdd:COG4913 224 FEAADALVEHFD-DLERAHEALEDAR----EQIELLEPIRELAERYAAARERLAELEYLRAALRLWfaqrrlELLEAELE 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 977 EKEKEITDLCNELESLKNAVEHQRKKNNERQQQVEAVELESKDLLKRlfpavsvpshsnysewlrsfEKKAKacmagpsd 1056
Cdd:COG4913 299 ELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLER--------------------EIERL-------- 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 1057 TEAVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKVKAEESRRTIQQLRREREHLEIELEK 1136
Cdd:COG4913 351 ERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIAS 430
|
250 260
....*....|....*....|.
gi 672077858 1137 AEVERSTYVMEVRELKTQLNE 1157
Cdd:COG4913 431 LERRKSNIPARLLALRDALAE 451
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
311-639 |
8.64e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 40.33 E-value: 8.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 311 KEKSGVIKEALkkSNKGELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKERSSVVMA--RMKERIG----- 383
Cdd:PRK04863 279 NERRVHLEEAL--ELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTalRQQEKIEryqad 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 384 TLEKEHNIFQNKMHVsyQETQQMQMKFEQVREQMEAEIAHLKQEngiLRDAVS----NTTNQLESKQSAE-LNKLRQDCG 458
Cdd:PRK04863 357 LEELEERLEEQNEVV--EEADEQQEENEARAEAAEEEVDELKSQ---LADYQQaldvQQTRAIQYQQAVQaLERAKQLCG 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 459 RLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQL---QEAERRWEEVQSYIRK------RTAEHEAAQQDLQ--SKFVAK 527
Cdd:PRK04863 432 LPDLTADNAEDWLEEFQAKEQEATEELLSLEQKLsvaQAAHSQFEQAYQLVRKiagevsRSEAWDVARELLRrlREQRHL 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 528 ENEVQSLHSKLTDtLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEA------------------------- 582
Cdd:PRK04863 512 AEQLQQLRMRLSE-LEQRLRQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEArleslsesvsearerrmalrqqleq 590
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 672077858 583 LKAQIQQFHSQ----IAAQTSASVLAE-------------ELHKVIAEKDKQLKQTEDSLASEQDHLASKEQEL 639
Cdd:PRK04863 591 LQARIQRLAARapawLAAQDALARLREqsgeefedsqdvtEYMQQLLERERELTVERDELAARKQALDEEIERL 664
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
525-745 |
9.89e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.75 E-value: 9.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 525 VAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAA-------- 596
Cdd:COG4942 16 AAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAElekeiael 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 672077858 597 QTSASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKS 676
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 672077858 677 VHVKDDKIRLLEEQLQREVASRVEELKILNDQNKALQLEVQKLQAvvSEQPNKDVVEQMKKCIQEKDEK 745
Cdd:COG4942 176 LEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQ--EAEELEALIARLEAEAAAAAER 242
|
|
| |
