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Conserved domains on  [gi|672082486|ref|XP_008770110|]
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meiosis expressed gene 1 protein homolog isoform X1 [Rattus norvegicus]

Protein Classification

Meiosis_expr domain-containing protein( domain architecture ID 10633518)

Meiosis_expr domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Meiosis_expr pfam15163
Meiosis-expressed; This family of proteins is essential for spermiogenesis.
 11-86 1.91e-36

Meiosis-expressed; This family of proteins is essential for spermiogenesis.


:

Pssm-ID: 464539  Cd Length: 75  Bit Score: 117.58  E-value: 1.91e-36
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 672082486  11 ISRAKKWSEEIENLYRFQQAGYRDEIEYKQVKQvAMVDRWPETGYVKKLQRRDNTFYYYNKQRECEDKEVHKVKIY 86
Cdd:pfam15163  1 MSRAKKWSEEVENAYRFQQAGYRDEIEYKQIKQ-AEPERWPENGYVKKLQRRDGTFYYYNKHRECEDKEVHKVKLY 75
 
Name Accession Description Interval E-value
Meiosis_expr pfam15163
Meiosis-expressed; This family of proteins is essential for spermiogenesis.
 11-86 1.91e-36

Meiosis-expressed; This family of proteins is essential for spermiogenesis.


Pssm-ID: 464539  Cd Length: 75  Bit Score: 117.58  E-value: 1.91e-36
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 672082486  11 ISRAKKWSEEIENLYRFQQAGYRDEIEYKQVKQvAMVDRWPETGYVKKLQRRDNTFYYYNKQRECEDKEVHKVKIY 86
Cdd:pfam15163  1 MSRAKKWSEEVENAYRFQQAGYRDEIEYKQIKQ-AEPERWPENGYVKKLQRRDGTFYYYNKHRECEDKEVHKVKLY 75
 
Name Accession Description Interval E-value
Meiosis_expr pfam15163
Meiosis-expressed; This family of proteins is essential for spermiogenesis.
 11-86 1.91e-36

Meiosis-expressed; This family of proteins is essential for spermiogenesis.


Pssm-ID: 464539  Cd Length: 75  Bit Score: 117.58  E-value: 1.91e-36
                         10        20        30        40        50        60        70
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 672082486  11 ISRAKKWSEEIENLYRFQQAGYRDEIEYKQVKQvAMVDRWPETGYVKKLQRRDNTFYYYNKQRECEDKEVHKVKIY 86
Cdd:pfam15163  1 MSRAKKWSEEVENAYRFQQAGYRDEIEYKQIKQ-AEPERWPENGYVKKLQRRDGTFYYYNKHRECEDKEVHKVKLY 75
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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