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Conserved domains on  [gi|688616936|ref|XP_009296288|]
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uncharacterized protein [Danio rerio]

Protein Classification

pseudouridine-5'-phosphate glycosidase/carbohydrate kinase family protein( domain architecture ID 10514968)

pseudouridine-5'-phosphate glycosidase/carbohydrate kinase family protein where pseudouridine-5'-phosphate glycosidase catalyzes the reversible cleavage of pseudouridine 5'-phosphate (PsiMP) to ribose 5-phosphate and uracil, and carbohydrate kinase family protein such as YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Indigoidine_A pfam04227
Indigoidine synthase A like protein; Indigoidine is a blue pigment synthesized by Erwinia ...
33-322 0e+00

Indigoidine synthase A like protein; Indigoidine is a blue pigment synthesized by Erwinia chrysanthemi implicated in pathogenicity and protection from oxidative stress. IdgA is involved in indigoidine biosynthesis, but its specific function is unknown. The recommended name for this protein is now pseudouridine-5'-phosphate glycosidase.


:

Pssm-ID: 461231  Cd Length: 289  Bit Score: 527.35  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936   33 VKEALAHHRPVVALESTIITHGMPYPHNLSTAKEVEAIVRAEGSIPATIGILEGRIHVGLSSDELDFLAQSKTAlKVSRR 112
Cdd:pfam04227   2 VAEALAAGKPVVALESTIITHGLPYPQNLETALEVEAIVRENGAVPATIAILDGRPKVGLTDEELERLADAGGA-KVSRR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  113 DLPYVISKGLSGGTTVSGTMIAANKAGIPVFVTGGIGGVHRDGENSLDVSADLTELGRTPIAVVSAGVKSILDIGRTLEY 192
Cdd:pfam04227  81 DLAYVLALGLDGGTTVAATMILAHLAGIRVFATGGIGGVHRGAEETMDISADLTELGRTPVAVVCAGVKSILDIPRTLEY 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  193 LETQGVCVATYGdSKSFPAFFSRQSGFTSPYNISSPQEAADLIASTFSLGLKSGLLLAVPIPEEHAATGQQIEDAIQTAV 272
Cdd:pfam04227 161 LETQGVPVVGYG-TDEFPAFYTRDSGFKSPYRVDSPEEAAAIIRAQWALGLGSGVLVANPIPEEHALDREEIDAAIEQAL 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 688616936  273 TEASSKGVTGRDVTPFILQRVSELTKGKSLQANIALIRNNARVGSQIAHA 322
Cdd:pfam04227 240 AEAEEQGITGKAVTPFLLARIAELTGGKSLEANIALVKNNARLAAQIAVA 289
YeiC_kinase_like cd01941
YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ...
351-667 1.05e-80

YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.


:

Pssm-ID: 238916 [Multi-domain]  Cd Length: 288  Bit Score: 258.40  E-value: 1.05e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 351 KTIVIGGINVDFIAKgTTKKLLFGQTNPGSVCQSFGGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYC-KHMDTSA 429
Cdd:cd01941    1 EIVVIGAANIDLRGK-VSGSLVPGTSNPGHVKQSPGGVGRNIAENLARLGVSVALLSAVGDDSEGESILEESeKAGLNVR 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 430 VARLQDQRTATYCAVITESGELSLGLGDMDIHQQIQEQYVSQFVDQLSSASLIVLDGNIPVSTINYVCRIAKKHAVPVWF 509
Cdd:cd01941   80 GIVFEGRSTASYTAILDKDGDLVVALADMDIYELLTPDFLRKIREALKEAKPIVVDANLPEEALEYLLALAAKHGVPVAF 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 510 EPTDADKACKPFlsESWKALAFTSPNLTELCTMNHTLGLPTPAElprsledvlgcAPALSRPLLEHLHCVLVTLGSLGVL 589
Cdd:cd01941  160 EPTSAPKLKKLF--YLLHAIDLLTPNRAELEALAGALIENNEDE-----------NKAAKILLLPGIKNVIVTLGAKGVL 226
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 688616936 590 VCGEHEAGtvnlqprkqkrarlCAVHYPALTVssEETVNVSGAGDSFAGAMMVGILQGLHTDSCVQMGLLAARRSLLT 667
Cdd:cd01941  227 LSSREGGV--------------ETKLFPAPQP--ETVVNVTGAGDAFVAGLVAGLLEGMSLDDSLRFAQAAAALTLES 288
 
Name Accession Description Interval E-value
Indigoidine_A pfam04227
Indigoidine synthase A like protein; Indigoidine is a blue pigment synthesized by Erwinia ...
33-322 0e+00

Indigoidine synthase A like protein; Indigoidine is a blue pigment synthesized by Erwinia chrysanthemi implicated in pathogenicity and protection from oxidative stress. IdgA is involved in indigoidine biosynthesis, but its specific function is unknown. The recommended name for this protein is now pseudouridine-5'-phosphate glycosidase.


Pssm-ID: 461231  Cd Length: 289  Bit Score: 527.35  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936   33 VKEALAHHRPVVALESTIITHGMPYPHNLSTAKEVEAIVRAEGSIPATIGILEGRIHVGLSSDELDFLAQSKTAlKVSRR 112
Cdd:pfam04227   2 VAEALAAGKPVVALESTIITHGLPYPQNLETALEVEAIVRENGAVPATIAILDGRPKVGLTDEELERLADAGGA-KVSRR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  113 DLPYVISKGLSGGTTVSGTMIAANKAGIPVFVTGGIGGVHRDGENSLDVSADLTELGRTPIAVVSAGVKSILDIGRTLEY 192
Cdd:pfam04227  81 DLAYVLALGLDGGTTVAATMILAHLAGIRVFATGGIGGVHRGAEETMDISADLTELGRTPVAVVCAGVKSILDIPRTLEY 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  193 LETQGVCVATYGdSKSFPAFFSRQSGFTSPYNISSPQEAADLIASTFSLGLKSGLLLAVPIPEEHAATGQQIEDAIQTAV 272
Cdd:pfam04227 161 LETQGVPVVGYG-TDEFPAFYTRDSGFKSPYRVDSPEEAAAIIRAQWALGLGSGVLVANPIPEEHALDREEIDAAIEQAL 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 688616936  273 TEASSKGVTGRDVTPFILQRVSELTKGKSLQANIALIRNNARVGSQIAHA 322
Cdd:pfam04227 240 AEAEEQGITGKAVTPFLLARIAELTGGKSLEANIALVKNNARLAAQIAVA 289
PsuG COG2313
Pseudouridine-5'-phosphate glycosidase (pseudoU degradation) [Nucleotide transport and ...
25-327 6.17e-169

Pseudouridine-5'-phosphate glycosidase (pseudoU degradation) [Nucleotide transport and metabolism];


Pssm-ID: 441887  Cd Length: 303  Bit Score: 485.76  E-value: 6.17e-169
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  25 SLFTIHPDVKEALAHHRPVVALESTIITHGMPYPHNLSTAKEVEAIVRAEGSIPATIGILEGRIHVGLSSDELDFLAQSK 104
Cdd:COG2313    2 KYLRISPEVAAALAAGRPVVALESTIISHGMPYPQNLETAREVEAIVREAGAVPATIAVLDGKIKVGLSDEELERLAQAK 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 105 TALKVSRRDLPYVISKGLSGGTTVSGTMIAANKAGIPVFVTGGIGGVHRDGENSLDVSADLTELGRTPIAVVSAGVKSIL 184
Cdd:COG2313   82 DVAKVSRRDLPVALARGRSGATTVAATMILAALAGIRVFATGGIGGVHRGAEETFDISADLQELARTPVAVVCAGAKSIL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 185 DIGRTLEYLETQGVCVATYGdSKSFPAFFSRQSGFTSPYNISSPQEAADLIASTFSLGLKSGLLLAVPIPEEHAATGQQI 264
Cdd:COG2313  162 DLPLTLEYLETLGVPVIGYG-TDEFPAFYSRSSGLPVPYRVDSPEEIAAILRAKWALGLPGGVLVANPIPEEDALDAEEI 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 688616936 265 EDAIQTAVTEASSKGVTGRDVTPFILQRVSELTKGKSLQANIALIRNNARVGSQIAHALSKLN 327
Cdd:COG2313  241 DAAIAEALAEAEAQGIRGKAVTPFLLARIAELTGGRSLEANIALVKNNARLAAEIAVALAALA 303
YeiC_kinase_like cd01941
YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ...
351-667 1.05e-80

YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238916 [Multi-domain]  Cd Length: 288  Bit Score: 258.40  E-value: 1.05e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 351 KTIVIGGINVDFIAKgTTKKLLFGQTNPGSVCQSFGGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYC-KHMDTSA 429
Cdd:cd01941    1 EIVVIGAANIDLRGK-VSGSLVPGTSNPGHVKQSPGGVGRNIAENLARLGVSVALLSAVGDDSEGESILEESeKAGLNVR 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 430 VARLQDQRTATYCAVITESGELSLGLGDMDIHQQIQEQYVSQFVDQLSSASLIVLDGNIPVSTINYVCRIAKKHAVPVWF 509
Cdd:cd01941   80 GIVFEGRSTASYTAILDKDGDLVVALADMDIYELLTPDFLRKIREALKEAKPIVVDANLPEEALEYLLALAAKHGVPVAF 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 510 EPTDADKACKPFlsESWKALAFTSPNLTELCTMNHTLGLPTPAElprsledvlgcAPALSRPLLEHLHCVLVTLGSLGVL 589
Cdd:cd01941  160 EPTSAPKLKKLF--YLLHAIDLLTPNRAELEALAGALIENNEDE-----------NKAAKILLLPGIKNVIVTLGAKGVL 226
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 688616936 590 VCGEHEAGtvnlqprkqkrarlCAVHYPALTVssEETVNVSGAGDSFAGAMMVGILQGLHTDSCVQMGLLAARRSLLT 667
Cdd:cd01941  227 LSSREGGV--------------ETKLFPAPQP--ETVVNVTGAGDAFVAGLVAGLLEGMSLDDSLRFAQAAAALTLES 288
RbsK COG0524
Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar ...
351-680 3.33e-36

Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar or nucleoside kinase, ribokinase family is part of the Pathway/BioSystem: Glycolysis


Pssm-ID: 440290 [Multi-domain]  Cd Length: 301  Bit Score: 138.09  E-value: 3.33e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 351 KTIVIGGINVDFIAKGTTKKLLFGQTNPGSVCQSFGGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCK--HMDTS 428
Cdd:COG0524    1 DVLVIGEALVDLVARVDRLPKGGETVLAGSFRRSPGGAAANVAVALARLGARVALVGAVGDDPFGDFLLAELRaeGVDTS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 429 AVARLQDQRTATYCAVITESGELSLgLGDMDIHQQIQEQYVSQfvDQLSSASLIVLDG-----NIPVSTINYVCRIAKKH 503
Cdd:COG0524   81 GVRRDPGAPTGLAFILVDPDGERTI-VFYRGANAELTPEDLDE--ALLAGADILHLGGitlasEPPREALLAALEAARAA 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 504 AVPVWFEPTDADKACKPFLSESWKALAFTS---PNLTELCTMnhtLGLPTPAELPRSLEDvLGCApalsrpllehlhCVL 580
Cdd:COG0524  158 GVPVSLDPNYRPALWEPARELLRELLALVDilfPNEEEAELL---TGETDPEEAAAALLA-RGVK------------LVV 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 581 VTLGSLGVLVCGEHEagtvnlqprkqkrarlcAVHYPALTVsseETVNVSGAGDSFAGAMMVGILQGLHTDSCVQMGLLA 660
Cdd:COG0524  222 VTLGAEGALLYTGGE-----------------VVHVPAFPV---EVVDTTGAGDAFAAGFLAGLLEGLDLEEALRFANAA 281
                        330       340
                 ....*....|....*....|
gi 688616936 661 ARRSLLTPHPIDPSLTADAI 680
Cdd:COG0524  282 AALVVTRPGAQPALPTREEV 301
PfkB pfam00294
pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine ...
354-661 1.34e-30

pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine kinases.


Pssm-ID: 425587 [Multi-domain]  Cd Length: 294  Bit Score: 122.07  E-value: 1.34e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  354 VIGGINVDFIakGTTKKLLFGQTNPGSVCQSFGGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCK--HMDTSAVA 431
Cdd:pfam00294   4 VIGEANIDLI--GNVEGLPGELVRVSTVEKGPGGKGANVAVALARLGGDVAFIGAVGDDNFGEFLLQELKkeGVDTDYVV 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  432 RLQDQRTATYCAVITESGELSLGLGDMDIHQQIQEQYVSQfVDQLSSASLIVLDG----NIPVSTINYVCRIAKKH--AV 505
Cdd:pfam00294  82 IDEDTRTGTALIEVDGDGERTIVFNRGAAADLTPEELEEN-EDLLENADLLYISGslplGLPEATLEELIEAAKNGgtFD 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  506 PVWFEPTDADKACkpfLSESWKALAFTSPNLTELCTM-NHTLGlptpaelprSLEDVLGCAPALSRPLLEHlhcVLVTLG 584
Cdd:pfam00294 161 PNLLDPLGAAREA---LLELLPLADLLKPNEEELEALtGAKLD---------DIEEALAALHKLLAKGIKT---VIVTLG 225
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 688616936  585 SLGVLVCGEHEagtvnlqprkqkrarlcavHYPALTVSSEETVNVSGAGDSFAGAMMVGILQGLHTDSCVQMGLLAA 661
Cdd:pfam00294 226 ADGALVVEGDG-------------------EVHVPAVPKVKVVDTTGAGDSFVGGFLAGLLAGKSLEEALRFANAAA 283
PRK09850 PRK09850
pseudouridine kinase; Provisional
353-644 9.76e-20

pseudouridine kinase; Provisional


Pssm-ID: 182111 [Multi-domain]  Cd Length: 313  Bit Score: 90.82  E-value: 9.76e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 353 IVIGGINVDfIAKGTTKKLLFGQTNPGSVCQSFGGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCK----HMDTS 428
Cdd:PRK09850   8 VIIGSANID-VAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNqsgvYVDKC 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 429 AVarLQDQRTATYCAVITESGELSLGLGDMDIHQQIQEQYVSQFVDQLSSASLIVLDGNIPVSTINYVCRIAKKhaVPVW 508
Cdd:PRK09850  87 LI--VPGENTSSYLSLLDNTGEMLVAINDMNISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWILDNAAN--VPVF 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 509 FEPTDADKACKpfLSESWKALAFTSPNLTELCTMNhtlGLPTPAElprslEDVLGCAPALSrpllEH-LHCVLVTLGSLG 587
Cdd:PRK09850 163 VDPVSAWKCVK--VRDRLNQIHTLKPNRLEAETLS---GIALSGR-----EDVAKVAAWFH----QHgLNRLVLSMGGDG 228
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 688616936 588 VLVcgEHEAGTVNLQPrkqkrarlcavhyPALTvsseETVNVSGAGDsfagAMMVGI 644
Cdd:PRK09850 229 VYY--SDISGESGWSA-------------PIKT----NVINVTGAGD----AMMAGL 262
myo_inos_iolC_N TIGR04382
5-dehydro-2-deoxygluconokinase; All members of the seed alignment for this model are ...
386-657 4.54e-08

5-dehydro-2-deoxygluconokinase; All members of the seed alignment for this model are translated from the iolC gene of known or putative inositol catabolism operons. Members with characterized function are 5-dehydro-2-deoxygluconokinase, the enzyme catalyzing the fifth step in degradation from myo-inositol or closely related compounds. Note that many members of this family are fusion proteins with an additional C-terminal domain, of unknown function, described by pfam09863. [Energy metabolism, Sugars]


Pssm-ID: 275175 [Multi-domain]  Cd Length: 309  Bit Score: 55.30  E-value: 4.54e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  386 GGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCKH--MDTSAVARLQDQRTAtycAVITE---SGELSL-----GL 455
Cdd:TIGR04382  34 GGSPANIAVGAARLGLKTAFITRVGDDQFGRFVRDYLRRegVDTSHVVTDPGRRTS---LVFLEikpPDEFPLlfyreNA 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  456 GDMDIH-QQIQEQYVSQfvdqlssASLIVLDGNI----PV-STINYVCRIAKKHAVPVWFeptDADkackpFLSESWKAL 529
Cdd:TIGR04382 111 ADLALTpDDVDEDYIAS-------ARALLVSGTAlsqePSrEAVLKALEYARAAGVRVVL---DID-----YRPYLWKSP 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  530 AFTSPNLTELC--------TMNHTLGLPTPAELPRSLEDVLGCAPALsrpllehlhcVLVTLGSLGVLVCGEHEAGtvnl 601
Cdd:TIGR04382 176 EEAGIYLRLVLplvdviigTREEFDIAGGEGDDEAAARALLDAGVEI----------LVVKRGPEGSLVYTGDGEG---- 241
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 688616936  602 qprkqkrarlcaVHYPALTVsseETVNVSGAGDSFAGAMMVGILQGLHTDSCVQMG 657
Cdd:TIGR04382 242 ------------VEVPGFPV---EVLNVLGAGDAFASGFLYGLLAGWDLEKALRYG 282
 
Name Accession Description Interval E-value
Indigoidine_A pfam04227
Indigoidine synthase A like protein; Indigoidine is a blue pigment synthesized by Erwinia ...
33-322 0e+00

Indigoidine synthase A like protein; Indigoidine is a blue pigment synthesized by Erwinia chrysanthemi implicated in pathogenicity and protection from oxidative stress. IdgA is involved in indigoidine biosynthesis, but its specific function is unknown. The recommended name for this protein is now pseudouridine-5'-phosphate glycosidase.


Pssm-ID: 461231  Cd Length: 289  Bit Score: 527.35  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936   33 VKEALAHHRPVVALESTIITHGMPYPHNLSTAKEVEAIVRAEGSIPATIGILEGRIHVGLSSDELDFLAQSKTAlKVSRR 112
Cdd:pfam04227   2 VAEALAAGKPVVALESTIITHGLPYPQNLETALEVEAIVRENGAVPATIAILDGRPKVGLTDEELERLADAGGA-KVSRR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  113 DLPYVISKGLSGGTTVSGTMIAANKAGIPVFVTGGIGGVHRDGENSLDVSADLTELGRTPIAVVSAGVKSILDIGRTLEY 192
Cdd:pfam04227  81 DLAYVLALGLDGGTTVAATMILAHLAGIRVFATGGIGGVHRGAEETMDISADLTELGRTPVAVVCAGVKSILDIPRTLEY 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  193 LETQGVCVATYGdSKSFPAFFSRQSGFTSPYNISSPQEAADLIASTFSLGLKSGLLLAVPIPEEHAATGQQIEDAIQTAV 272
Cdd:pfam04227 161 LETQGVPVVGYG-TDEFPAFYTRDSGFKSPYRVDSPEEAAAIIRAQWALGLGSGVLVANPIPEEHALDREEIDAAIEQAL 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 688616936  273 TEASSKGVTGRDVTPFILQRVSELTKGKSLQANIALIRNNARVGSQIAHA 322
Cdd:pfam04227 240 AEAEEQGITGKAVTPFLLARIAELTGGKSLEANIALVKNNARLAAQIAVA 289
PsuG COG2313
Pseudouridine-5'-phosphate glycosidase (pseudoU degradation) [Nucleotide transport and ...
25-327 6.17e-169

Pseudouridine-5'-phosphate glycosidase (pseudoU degradation) [Nucleotide transport and metabolism];


Pssm-ID: 441887  Cd Length: 303  Bit Score: 485.76  E-value: 6.17e-169
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  25 SLFTIHPDVKEALAHHRPVVALESTIITHGMPYPHNLSTAKEVEAIVRAEGSIPATIGILEGRIHVGLSSDELDFLAQSK 104
Cdd:COG2313    2 KYLRISPEVAAALAAGRPVVALESTIISHGMPYPQNLETAREVEAIVREAGAVPATIAVLDGKIKVGLSDEELERLAQAK 81
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 105 TALKVSRRDLPYVISKGLSGGTTVSGTMIAANKAGIPVFVTGGIGGVHRDGENSLDVSADLTELGRTPIAVVSAGVKSIL 184
Cdd:COG2313   82 DVAKVSRRDLPVALARGRSGATTVAATMILAALAGIRVFATGGIGGVHRGAEETFDISADLQELARTPVAVVCAGAKSIL 161
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 185 DIGRTLEYLETQGVCVATYGdSKSFPAFFSRQSGFTSPYNISSPQEAADLIASTFSLGLKSGLLLAVPIPEEHAATGQQI 264
Cdd:COG2313  162 DLPLTLEYLETLGVPVIGYG-TDEFPAFYSRSSGLPVPYRVDSPEEIAAILRAKWALGLPGGVLVANPIPEEDALDAEEI 240
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 688616936 265 EDAIQTAVTEASSKGVTGRDVTPFILQRVSELTKGKSLQANIALIRNNARVGSQIAHALSKLN 327
Cdd:COG2313  241 DAAIAEALAEAEAQGIRGKAVTPFLLARIAELTGGRSLEANIALVKNNARLAAEIAVALAALA 303
YeiC_kinase_like cd01941
YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ...
351-667 1.05e-80

YeiC-like sugar kinase. Found in eukaryotes and bacteria, YeiC-like kinase is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238916 [Multi-domain]  Cd Length: 288  Bit Score: 258.40  E-value: 1.05e-80
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 351 KTIVIGGINVDFIAKgTTKKLLFGQTNPGSVCQSFGGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYC-KHMDTSA 429
Cdd:cd01941    1 EIVVIGAANIDLRGK-VSGSLVPGTSNPGHVKQSPGGVGRNIAENLARLGVSVALLSAVGDDSEGESILEESeKAGLNVR 79
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 430 VARLQDQRTATYCAVITESGELSLGLGDMDIHQQIQEQYVSQFVDQLSSASLIVLDGNIPVSTINYVCRIAKKHAVPVWF 509
Cdd:cd01941   80 GIVFEGRSTASYTAILDKDGDLVVALADMDIYELLTPDFLRKIREALKEAKPIVVDANLPEEALEYLLALAAKHGVPVAF 159
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 510 EPTDADKACKPFlsESWKALAFTSPNLTELCTMNHTLGLPTPAElprsledvlgcAPALSRPLLEHLHCVLVTLGSLGVL 589
Cdd:cd01941  160 EPTSAPKLKKLF--YLLHAIDLLTPNRAELEALAGALIENNEDE-----------NKAAKILLLPGIKNVIVTLGAKGVL 226
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 688616936 590 VCGEHEAGtvnlqprkqkrarlCAVHYPALTVssEETVNVSGAGDSFAGAMMVGILQGLHTDSCVQMGLLAARRSLLT 667
Cdd:cd01941  227 LSSREGGV--------------ETKLFPAPQP--ETVVNVTGAGDAFVAGLVAGLLEGMSLDDSLRFAQAAAALTLES 288
RbsK COG0524
Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar ...
351-680 3.33e-36

Sugar or nucleoside kinase, ribokinase family [Carbohydrate transport and metabolism]; Sugar or nucleoside kinase, ribokinase family is part of the Pathway/BioSystem: Glycolysis


Pssm-ID: 440290 [Multi-domain]  Cd Length: 301  Bit Score: 138.09  E-value: 3.33e-36
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 351 KTIVIGGINVDFIAKGTTKKLLFGQTNPGSVCQSFGGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCK--HMDTS 428
Cdd:COG0524    1 DVLVIGEALVDLVARVDRLPKGGETVLAGSFRRSPGGAAANVAVALARLGARVALVGAVGDDPFGDFLLAELRaeGVDTS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 429 AVARLQDQRTATYCAVITESGELSLgLGDMDIHQQIQEQYVSQfvDQLSSASLIVLDG-----NIPVSTINYVCRIAKKH 503
Cdd:COG0524   81 GVRRDPGAPTGLAFILVDPDGERTI-VFYRGANAELTPEDLDE--ALLAGADILHLGGitlasEPPREALLAALEAARAA 157
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 504 AVPVWFEPTDADKACKPFLSESWKALAFTS---PNLTELCTMnhtLGLPTPAELPRSLEDvLGCApalsrpllehlhCVL 580
Cdd:COG0524  158 GVPVSLDPNYRPALWEPARELLRELLALVDilfPNEEEAELL---TGETDPEEAAAALLA-RGVK------------LVV 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 581 VTLGSLGVLVCGEHEagtvnlqprkqkrarlcAVHYPALTVsseETVNVSGAGDSFAGAMMVGILQGLHTDSCVQMGLLA 660
Cdd:COG0524  222 VTLGAEGALLYTGGE-----------------VVHVPAFPV---EVVDTTGAGDAFAAGFLAGLLEGLDLEEALRFANAA 281
                        330       340
                 ....*....|....*....|
gi 688616936 661 ARRSLLTPHPIDPSLTADAI 680
Cdd:COG0524  282 AALVVTRPGAQPALPTREEV 301
PfkB pfam00294
pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine ...
354-661 1.34e-30

pfkB family carbohydrate kinase; This family includes a variety of carbohydrate and pyrimidine kinases.


Pssm-ID: 425587 [Multi-domain]  Cd Length: 294  Bit Score: 122.07  E-value: 1.34e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  354 VIGGINVDFIakGTTKKLLFGQTNPGSVCQSFGGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCK--HMDTSAVA 431
Cdd:pfam00294   4 VIGEANIDLI--GNVEGLPGELVRVSTVEKGPGGKGANVAVALARLGGDVAFIGAVGDDNFGEFLLQELKkeGVDTDYVV 81
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  432 RLQDQRTATYCAVITESGELSLGLGDMDIHQQIQEQYVSQfVDQLSSASLIVLDG----NIPVSTINYVCRIAKKH--AV 505
Cdd:pfam00294  82 IDEDTRTGTALIEVDGDGERTIVFNRGAAADLTPEELEEN-EDLLENADLLYISGslplGLPEATLEELIEAAKNGgtFD 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  506 PVWFEPTDADKACkpfLSESWKALAFTSPNLTELCTM-NHTLGlptpaelprSLEDVLGCAPALSRPLLEHlhcVLVTLG 584
Cdd:pfam00294 161 PNLLDPLGAAREA---LLELLPLADLLKPNEEELEALtGAKLD---------DIEEALAALHKLLAKGIKT---VIVTLG 225
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 688616936  585 SLGVLVCGEHEagtvnlqprkqkrarlcavHYPALTVSSEETVNVSGAGDSFAGAMMVGILQGLHTDSCVQMGLLAA 661
Cdd:pfam00294 226 ADGALVVEGDG-------------------EVHVPAVPKVKVVDTTGAGDSFVGGFLAGLLAGKSLEEALRFANAAA 283
ribokinase cd01174
Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This ...
353-661 2.87e-25

Ribokinase catalyses the phosphorylation of ribose to ribose-5-phosphate using ATP. This reaction is the first step in the ribose metabolism. It traps ribose within the cell after uptake and also prepares the sugar for use in the synthesis of nucleotides and histidine, and for entry into the pentose phosphate pathway. Ribokinase is dimeric in solution.


Pssm-ID: 238579 [Multi-domain]  Cd Length: 292  Bit Score: 106.48  E-value: 2.87e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 353 IVIGGINVDFIAkgTTKKL-LFGQTNPG-SVCQSFGGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCK--HMDTS 428
Cdd:cd01174    3 VVVGSINVDLVT--RVDRLpKPGETVLGsSFETGPGGKGANQAVAAARLGARVAMIGAVGDDAFGDELLENLReeGIDVS 80
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 429 AVARLQDQRTATycAVIT--ESGELSLGlgdmdIH----QQIQEQYVSQFVDQLSSASLIVLDGNIPVSTINYVCRIAKK 502
Cdd:cd01174   81 YVEVVVGAPTGT--AVITvdESGENRIV-----VVpganGELTPADVDAALELIAAADVLLLQLEIPLETVLAALRAARR 153
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 503 HAVPVWFEPTDADkackPFLSESWKALAFTSPNLTELCTMnhtLGLPTPAElprsledvlGCAPALSRPLLEH-LHCVLV 581
Cdd:cd01174  154 AGVTVILNPAPAR----PLPAELLALVDILVPNETEAALL---TGIEVTDE---------EDAEKAARLLLAKgVKNVIV 217
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 582 TLGSLGVLVCGEHEagtvnlqprkqkrarlcAVHYPALTVsseETVNVSGAGDSFAGAMMVGILQGLHTDSCVQMGLLAA 661
Cdd:cd01174  218 TLGAKGALLASGGE-----------------VEHVPAFKV---KAVDTTGAGDTFIGALAAALARGLSLEEAIRFANAAA 277
PRK09850 PRK09850
pseudouridine kinase; Provisional
353-644 9.76e-20

pseudouridine kinase; Provisional


Pssm-ID: 182111 [Multi-domain]  Cd Length: 313  Bit Score: 90.82  E-value: 9.76e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 353 IVIGGINVDfIAKGTTKKLLFGQTNPGSVCQSFGGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCK----HMDTS 428
Cdd:PRK09850   8 VIIGSANID-VAGYSHESLNYADSNPGKIKFTPGGVGRNIAQNLALLGNKAWLLSAVGSDFYGQSLLTQTNqsgvYVDKC 86
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 429 AVarLQDQRTATYCAVITESGELSLGLGDMDIHQQIQEQYVSQFVDQLSSASLIVLDGNIPVSTINYVCRIAKKhaVPVW 508
Cdd:PRK09850  87 LI--VPGENTSSYLSLLDNTGEMLVAINDMNISNAITAEYLAQHREFIQRAKVIVADCNISEEALAWILDNAAN--VPVF 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 509 FEPTDADKACKpfLSESWKALAFTSPNLTELCTMNhtlGLPTPAElprslEDVLGCAPALSrpllEH-LHCVLVTLGSLG 587
Cdd:PRK09850 163 VDPVSAWKCVK--VRDRLNQIHTLKPNRLEAETLS---GIALSGR-----EDVAKVAAWFH----QHgLNRLVLSMGGDG 228
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 688616936 588 VLVcgEHEAGTVNLQPrkqkrarlcavhyPALTvsseETVNVSGAGDsfagAMMVGI 644
Cdd:PRK09850 229 VYY--SDISGESGWSA-------------PIKT----NVINVTGAGD----AMMAGL 262
PRK09954 PRK09954
sugar kinase;
353-678 5.55e-17

sugar kinase;


Pssm-ID: 182165 [Multi-domain]  Cd Length: 362  Bit Score: 83.06  E-value: 5.55e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 353 IVIGGINVDFiaKGTTKkLLFGQ--TNPGSVCQSFGGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCKH--MDTS 428
Cdd:PRK09954  61 VVVGAINMDI--RGMAD-IRYPQaaSHPGTIHCSAGGVGRNIAHNLALLGRDVHLLSAIGDDFYGETLLEETRRagVNVS 137
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 429 AVARLQDQRTATYCAVITESGELSLGLGDMDIHQQIQEQYVSQFVDQLSSASLIVLDGNIPVSTINYVCRIAKKhaVPVW 508
Cdd:PRK09954 138 GCIRLHGQSTSTYLAIANRQDETVLAINDTHILQQLTPQLLNGSRDLIRHAGVVLADCNLTAEALEWVFTLADE--IPVF 215
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 509 FEPTDADKACKpflSESWKALAFT-SPNLTELCTMnhtLGLPTpaelpRSLEDVLGCAPALSRPLLEHLhcvLVTLGSLG 587
Cdd:PRK09954 216 VDTVSEFKAGK---IKHWLAHIHTlKPTQPELEIL---WGQAI-----TSDADRNAAVNALHQQGVQQI---FVYLPDES 281
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 588 VLvCGEHEAGTVNLQPrkqkrarlcavhyPALTvsseeTVNVSGAGDSFAGAMMVGILQGLHTDSCVQMGLLAARRSLLT 667
Cdd:PRK09954 282 VF-CSEKDGEQFLLTA-------------PAHT-----TVDSFGADDGFMAGLVYSFLEGYSFRDSARFAMACAAISRAS 342
                        330
                 ....*....|.
gi 688616936 668 PHPIDPSLTAD 678
Cdd:PRK09954 343 GSLNNPTLSAD 353
KdgK cd01166
2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form ...
351-661 9.71e-17

2-keto-3-deoxygluconate kinase (KdgK) phosphorylates 2-keto-3-deoxygluconate (KDG) to form 2-keto-3-deoxy-6-phosphogluconate (KDGP). KDG is the common intermediate product, that allows organisms to channel D-glucuronate and/or D-galacturinate into the glycolysis and therefore use polymers, like pectin and xylan as carbon sources.


Pssm-ID: 238571 [Multi-domain]  Cd Length: 294  Bit Score: 81.47  E-value: 9.71e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 351 KTIVIGGINVDFIAKGTTKKllfgqTNPGSVCQSFGGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCKH--MDTS 428
Cdd:cd01166    1 DVVTIGEVMVDLSPPGGGRL-----EQADSFRKFFGGAEANVAVGLARLGHRVALVTAVGDDPFGRFILAELRRegVDTS 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 429 AVARLQDQRTATYCAVITESGELSLglgDMDIHQ----QIQEQYVSQFVdqLSSASLIVLDGnIPVS-------TINYVC 497
Cdd:cd01166   76 HVRVDPGRPTGLYFLEIGAGGERRV---LYYRAGsaasRLTPEDLDEAA--LAGADHLHLSG-ITLAlsesareALLEAL 149
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 498 RIAKKHAVPVWFEP---------TDADKACKPFLSESwkALAFtsPNLTELCTMnhtLGLPTPAELPRSLEDVLGCAPAl 568
Cdd:cd01166  150 EAAKARGVTVSFDLnyrpklwsaEEAREALEELLPYV--DIVL--PSEEEAEAL---LGDEDPTDAAERALALALGVKA- 221
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 569 srpllehlhcVLVTLGSLGVLVCGEHEAGTVnlqprkqkrarlcavhyPALTVsseETVNVSGAGDSFAGAMMVGILQGL 648
Cdd:cd01166  222 ----------VVVKLGAEGALVYTGGGRVFV-----------------PAYPV---EVVDTTGAGDAFAAGFLAGLLEGW 271
                        330
                 ....*....|...
gi 688616936 649 HTDSCVQMGLLAA 661
Cdd:cd01166  272 DLEEALRFANAAA 284
bac_FRK cd01167
Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for ...
351-647 2.78e-13

Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into glucose-6-phosphate. This is in contrast to FRKs [or ketohexokinases (KHKs)] from mammalia and halophilic archaebacteria, which phosphorylate fructose to fructose-1-phosphate.


Pssm-ID: 238572 [Multi-domain]  Cd Length: 295  Bit Score: 71.13  E-value: 2.78e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 351 KTIVIGGINVDFIAKGTTKKLLFGQtNPGsvcqsfgGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCKH--MDTS 428
Cdd:cd01167    1 KVVCFGEALIDFIPEGSGAPETFTK-APG-------GAPANVAVALARLGGKAAFIGKVGDDEFGDFLLETLKEagVDTR 72
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 429 AVARLQDQRTATYCAVITESGELSL-----GLGDMDIHQQIQEQYVSQ--FVDqLSSASLIVLDGnipVSTINYVCRIAK 501
Cdd:cd01167   73 GIQFDPAAPTTLAFVTLDADGERSFefyrgPAADLLLDTELNPDLLSEadILH-FGSIALASEPS---RSALLELLEAAK 148
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 502 KHAVPVWFEP-------TDADKAcKPFLSESWKALAFTSPNLTELCTMnhtLGLPTPAELPRSLedvlgcapalsrpLLE 574
Cdd:cd01167  149 KAGVLISFDPnlrpplwRDEEEA-RERIAELLELADIVKLSDEELELL---FGEEDPEEIAALL-------------LLF 211
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 688616936 575 HLHCVLVTLGSLGVLVC-GEHEAgtvnlqprkqkrarlcavHYPALTVsseETVNVSGAGDSFAGAMMVGILQG 647
Cdd:cd01167  212 GLKLVLVTRGADGALLYtKGGVG------------------EVPGIPV---EVVDTTGAGDAFVAGLLAQLLSR 264
PTZ00292 PTZ00292
ribokinase; Provisional
348-640 2.79e-13

ribokinase; Provisional


Pssm-ID: 185541 [Multi-domain]  Cd Length: 326  Bit Score: 71.31  E-value: 2.79e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 348 MDSKTIVIGGINVDFIAkGTTKKLLFGQTNPG-SVCQSFGGVGRNIADCLSRLGHKPLFISAIGKD-SHSDAVLNYCKH- 424
Cdd:PTZ00292  14 AEPDVVVVGSSNTDLIG-YVDRMPQVGETLHGtSFHKGFGGKGANQAVMASKLGAKVAMVGMVGTDgFGSDTIKNFKRNg 92
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 425 MDTSAVARLQDqrTATYCAVITESGELSlglgdmdiHQQI------QEQYVSQFVDQLSS-----ASLIVLDGNIPVSTI 493
Cdd:PTZ00292  93 VNTSFVSRTEN--SSTGLAMIFVDTKTG--------NNEIviipgaNNALTPQMVDAQTDniqniCKYLICQNEIPLETT 162
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 494 NYVCRIAKKHAVPVWFEPTDADKAC-----KPFLseswKALAFTSPNLTElcTMNHTLGLPTPAELPRSLEDVLGCAPAl 568
Cdd:PTZ00292 163 LDALKEAKERGCYTVFNPAPAPKLAeveiiKPFL----KYVSLFCVNEVE--AALITGMEVTDTESAFKASKELQQLGV- 235
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 688616936 569 srpllehlHCVLVTLGSLGVLVCGEHEagtvnlqprkqkrarlCAVHYPALTVsseETVNVSGAGDSFAGAM 640
Cdd:PTZ00292 236 --------ENVIITLGANGCLIVEKEN----------------EPVHVPGKRV---KAVDTTGAGDCFVGSM 280
ribokinase_group_A cd01942
Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ...
353-661 1.29e-12

Ribokinase-like subgroup A. Found in bacteria and archaea, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238917 [Multi-domain]  Cd Length: 279  Bit Score: 68.88  E-value: 1.29e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 353 IVIGGINVDFIAKGTTKKLLFGQTNPGSVCQSFGGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCKHM--DTSAV 430
Cdd:cd01942    3 AVVGHLNYDIILKVESFPGPFESVLVKDLRREFGGSAGNTAVALAKLGLSPGLVAAVGEDFHGRLYLEELREEgvDTSHV 82
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 431 ARLQDQRTATycAVITESGELS----LGLGDMDihqqiqEQYVSQFVDQLSSASLIVLDGNIPVsTINYvcRIAKKHAVP 506
Cdd:cd01942   83 RVVDEDSTGV--AFILTDGDDNqiayFYPGAMD------ELEPNDEADPDGLADIVHLSSGPGL-IELA--RELAAGGIT 151
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 507 VWFEPTDADKacKPFLSESWKALAFTS---PNLTELCTMNHTLGLPTPAelprsledvlgcapalsrpLLEHLHCVLVTL 583
Cdd:cd01942  152 VSFDPGQELP--RLSGEELEEILERADilfVNDYEAELLKERTGLSEAE-------------------LASGVRVVVVTL 210
                        250       260       270       280       290       300       310
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 688616936 584 GSLGVLVcgeHEAGTVnlqprkqkrarlcaVHYPAltVSSEETVNVSGAGDSFAGAMMVGILQGLHTDSCVQMGLLAA 661
Cdd:cd01942  211 GPKGAIV---FEDGEE--------------VEVPA--VPAVKVVDTTGAGDAFRAGFLYGLLRGYDLEESLRLGNLAA 269
RfaE_like cd01172
RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the ...
386-661 4.28e-11

RfaE encodes a bifunctional ADP-heptose synthase involved in the biosynthesis of the lipopolysaccharide (LPS) core precursor ADP-L-glycero-D-manno-heptose. LPS plays an important role in maintaining the structural integrity of the bacterial outer membrane of gram-negative bacteria. RfaE consists of two domains, a sugar kinase domain, represented here, and a domain belonging to the cytidylyltransferase superfamily.


Pssm-ID: 238577 [Multi-domain]  Cd Length: 304  Bit Score: 64.50  E-value: 4.28e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 386 GGVGrNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCKH--MDTSAVaRLQDQRTATYCAVITESGELsLGLGDMDIH-- 461
Cdd:cd01172   40 GGAA-NVANNLASLGAKVTLLGVVGDDEAGDLLRKLLEKegIDTDGI-VDEGRPTTTKTRVIARNQQL-LRVDREDDSpl 116
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 462 -QQIQEQYVSQFVDQLSSASLIVL----DGNIPVSTINYVCRIAKKHAVPVWfeptdADKACKPFlSESWKALAFTsPNL 536
Cdd:cd01172  117 sAEEEQRLIERIAERLPEADVVILsdygKGVLTPRVIEALIAAARELGIPVL-----VDPKGRDY-SKYRGATLLT-PNE 189
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 537 TELctmNHTLGLPTPAElpRSLEDVLgcapalsRPLLEHLHC--VLVTLGSLGVLVCGEHEAgtvnlqprkqkrarlcAV 614
Cdd:cd01172  190 KEA---REALGDEINDD--DELEAAG-------EKLLELLNLeaLLVTLGEEGMTLFERDGE----------------VQ 241
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*..
gi 688616936 615 HYPALTVsseETVNVSGAGDSFAGAMMVGILQGLHTDSCVQMGLLAA 661
Cdd:cd01172  242 HIPALAK---EVYDVTGAGDTVIATLALALAAGADLEEAAFLANAAA 285
RfaE COG2870
ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell wall/membrane ...
386-661 9.91e-11

ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 442117 [Multi-domain]  Cd Length: 321  Bit Score: 63.68  E-value: 9.91e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 386 GGVGrNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCKH--MDTSAVARLQDQRTATYCAVITESGELslgL-----GDM 458
Cdd:COG2870   56 GGAA-NVAANLAALGAQVTLVGVVGDDEAGRELRRLLEEagIDTDGLVVDPRRPTTTKTRVIAGGQQL---LrldfeDRF 131
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 459 DIHQQIQEQYVSQFVDQLSSASLIVL----DGNIPVSTINYVCRIAKKHAVPVWFEPTDADkackpfLSESWKALAFTsP 534
Cdd:COG2870  132 PLSAELEARLLAALEAALPEVDAVILsdygKGVLTPELIQALIALARAAGKPVLVDPKGRD------FSRYRGATLLT-P 204
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 535 NLTELCTMnhtLGLPtpaelPRSLEDVLGCAPALsrplLEHLHC--VLVTLGSLGVLVCGEHEAgtvnlqprkqkrarlc 612
Cdd:COG2870  205 NLKEAEAA---VGIP-----IADEEELVAAAAEL----LERLGLeaLLVTRGEEGMTLFDADGP---------------- 256
                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....*....
gi 688616936 613 AVHYPALTVsseETVNVSGAGDSFAGAMMVGILQGLHTDSCVQMGLLAA 661
Cdd:COG2870  257 PHHLPAQAR---EVFDVTGAGDTVIATLALALAAGASLEEAAELANLAA 302
PRK11142 PRK11142
ribokinase; Provisional
350-661 1.94e-09

ribokinase; Provisional


Pssm-ID: 236858 [Multi-domain]  Cd Length: 306  Bit Score: 59.50  E-value: 1.94e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 350 SKTIVIGGINVDFIakgttkkLLF------GQTNPGSVCQ-SFGGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYC 422
Cdd:PRK11142   3 GKLVVLGSINADHV-------LNLesfprpGETLTGRHYQvAFGGKGANQAVAAARLGADIAFIACVGDDSIGESMRQQL 75
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 423 KH--MDTSAVARLQDQRTATYCAVITESGELSLGlgdmdIH----QQIQEQYVSQFVDQLSSASLIVLDGNIPVSTINYV 496
Cdd:PRK11142  76 AKdgIDTAPVSVIKGESTGVALIFVNDEGENSIG-----IHaganAALTPALVEAHRELIANADALLMQLETPLETVLAA 150
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 497 CRIAKKHAVPVWFEPTDAdkacKPFLSESWKALAFTSPNLTElctmnhtlglptpAELPR--SLEDVLGCAPAlsrplLE 574
Cdd:PRK11142 151 AKIAKQHGTKVILNPAPA----RELPDELLALVDIITPNETE-------------AEKLTgiRVEDDDDAAKA-----AQ 208
                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 575 HLH-----CVLVTLGSLGVLVCGEHEAGTVnlqprkqkrarlcavhyPALTVSSEETVnvsGAGDSFAGAMMVGILQGLH 649
Cdd:PRK11142 209 VLHqkgieTVLITLGSRGVWLSENGEGQRV-----------------PGFRVQAVDTI---AAGDTFNGALVTALLEGKP 268
                        330
                 ....*....|..
gi 688616936 650 TDSCVQMGLLAA 661
Cdd:PRK11142 269 LPEAIRFAHAAA 280
FruK COG1105
1-phosphofructokinase or 6-phosphofructokinase II [Carbohydrate transport and metabolism];
460-668 7.36e-09

1-phosphofructokinase or 6-phosphofructokinase II [Carbohydrate transport and metabolism];


Pssm-ID: 440722 [Multi-domain]  Cd Length: 304  Bit Score: 57.84  E-value: 7.36e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 460 IHQQIQEQYVSQFVDQLSSASLIVLDG----NIPVSTINYVCRIAKKHAVPVWFeptDADKACkpfLSESWKALAF-TSP 534
Cdd:COG1105  110 ISEEELEALLERLEELLKEGDWVVLSGslppGVPPDFYAELIRLARARGAKVVL---DTSGEA---LKAALEAGPDlIKP 183
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 535 NLTELCTMnhtLGLPtpaelPRSLEDVLGCApalsRPLLEH-LHCVLVTLGSLGVLVCGEHEAgtvnlqprkqkrarlCA 613
Cdd:COG1105  184 NLEELEEL---LGRP-----LETLEDIIAAA----RELLERgAENVVVSLGADGALLVTEDGV---------------YR 236
                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 688616936 614 VHYPALTVSSeeTVnvsGAGDSFAGAMMVGILQGLHTDSCVQMGLLAARRSLLTP 668
Cdd:COG1105  237 AKPPKVEVVS--TV---GAGDSMVAGFLAGLARGLDLEEALRLAVAAGAAAALSP 286
adenosine_kinase cd01168
Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside ...
386-673 2.89e-08

Adenosine kinase (AK) catalyzes the phosphorylation of ribofuranosyl-containing nucleoside analogues at the 5'-hydroxyl using ATP or GTP as the phosphate donor.The physiological function of AK is associated with the regulation of extracellular adenosine levels and the preservation of intracellular adenylate pools. Adenosine kinase is involved in the purine salvage pathway.


Pssm-ID: 238573 [Multi-domain]  Cd Length: 312  Bit Score: 56.08  E-value: 2.89e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 386 GGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCK--HMDTSAVaRLQDQRTATyCAV-ITESGELSL--------G 454
Cdd:cd01168   55 GGSAANTIRGAAALGGSAAFIGRVGDDKLGDFLLKDLRaaGVDTRYQ-VQPDGPTGT-CAVlVTPDAERTMctylgaanE 132
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 455 LGDMDIHQQIqeqyvsqfvdqLSSASLIVLDG---NIPVSTINYVCRIAKKHAVPVWFEPTDadkackPFLSESWK-ALA 530
Cdd:cd01168  133 LSPDDLDWSL-----------LAKAKYLYLEGyllTVPPEAILLAAEHAKENGVKIALNLSA------PFIVQRFKeALL 195
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 531 FTSPNLTeLCTMNHTlglpTPAELPRS-LEDVLGCAPALSrplleHLHC--VLVTLGSLGVLVCGEHEagtvnlqprkqk 607
Cdd:cd01168  196 ELLPYVD-ILFGNEE----EAEALAEAeTTDDLEAALKLL-----ALRCriVVITQGAKGAVVVEGGE------------ 253
                        250       260       270       280       290       300
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 688616936 608 rarlcavHYPALTVSSEETVNVSGAGDSFAGAMMVGILQGLHTDSCVQMGLLAARRSLLTPHPIDP 673
Cdd:cd01168  254 -------VYPVPAIPVEKIVDTNGAGDAFAGGFLYGLVQGEPLEECIRLGSYAAAEVIQQLGPRLP 312
myo_inos_iolC_N TIGR04382
5-dehydro-2-deoxygluconokinase; All members of the seed alignment for this model are ...
386-657 4.54e-08

5-dehydro-2-deoxygluconokinase; All members of the seed alignment for this model are translated from the iolC gene of known or putative inositol catabolism operons. Members with characterized function are 5-dehydro-2-deoxygluconokinase, the enzyme catalyzing the fifth step in degradation from myo-inositol or closely related compounds. Note that many members of this family are fusion proteins with an additional C-terminal domain, of unknown function, described by pfam09863. [Energy metabolism, Sugars]


Pssm-ID: 275175 [Multi-domain]  Cd Length: 309  Bit Score: 55.30  E-value: 4.54e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  386 GGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCKH--MDTSAVARLQDQRTAtycAVITE---SGELSL-----GL 455
Cdd:TIGR04382  34 GGSPANIAVGAARLGLKTAFITRVGDDQFGRFVRDYLRRegVDTSHVVTDPGRRTS---LVFLEikpPDEFPLlfyreNA 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  456 GDMDIH-QQIQEQYVSQfvdqlssASLIVLDGNI----PV-STINYVCRIAKKHAVPVWFeptDADkackpFLSESWKAL 529
Cdd:TIGR04382 111 ADLALTpDDVDEDYIAS-------ARALLVSGTAlsqePSrEAVLKALEYARAAGVRVVL---DID-----YRPYLWKSP 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936  530 AFTSPNLTELC--------TMNHTLGLPTPAELPRSLEDVLGCAPALsrpllehlhcVLVTLGSLGVLVCGEHEAGtvnl 601
Cdd:TIGR04382 176 EEAGIYLRLVLplvdviigTREEFDIAGGEGDDEAAARALLDAGVEI----------LVVKRGPEGSLVYTGDGEG---- 241
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 688616936  602 qprkqkrarlcaVHYPALTVsseETVNVSGAGDSFAGAMMVGILQGLHTDSCVQMG 657
Cdd:TIGR04382 242 ------------VEVPGFPV---EVLNVLGAGDAFASGFLYGLLAGWDLEKALRYG 282
ribokinase_pfkB_like cd00287
ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including ...
354-645 6.40e-08

ribokinase/pfkB superfamily: Kinases that accept a wide variety of substrates, including carbohydrates and aromatic small molecules, all are phosphorylated at a hydroxyl group. The superfamily includes ribokinase, fructokinase, ketohexokinase, 2-dehydro-3-deoxygluconokinase, 1-phosphofructokinase, the minor 6-phosphofructokinase (PfkB), inosine-guanosine kinase, and adenosine kinase. Even though there is a high degree of structural conservation within this superfamily, their multimerization level varies widely, monomeric (e.g. adenosine kinase), dimeric (e.g. ribokinase), and trimeric (e.g THZ kinase).


Pssm-ID: 238177 [Multi-domain]  Cd Length: 196  Bit Score: 53.25  E-value: 6.40e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 354 VIGGINVDFIAKGTTKKLLFGQTNPGSVCQSFGGVGRNIADCLSRLGHKPLFISAigkdshsDAVlnyckhmdtsavarl 433
Cdd:cd00287    4 VVGSLLVDVILRVDALPLPGGLVRPGDTEERAGGGAANVAVALARLGVSVTLVGA-------DAV--------------- 61
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 434 qdqrtatycavitesgelslglgdmdihqqiqeqyvsqFVDQLSSASLIVLDgnipvstinyVCRIAKKHAVPVWFEPtd 513
Cdd:cd00287   62 --------------------------------------VISGLSPAPEAVLD----------ALEEARRRGVPVVLDP-- 91
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 514 ADKACKPFLSESWKALAFT---SPNLTELctmnHTLglptpaeLPRSLEDVLGCAPALSRPLLEHLHCVLVTLGSLGVLV 590
Cdd:cd00287   92 GPRAVRLDGEELEKLLPGVdilTPNEEEA----EAL-------TGRRDLEVKEAAEAAALLLSKGPKVVIVTLGEKGAIV 160
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*
gi 688616936 591 CGEHEAgtvnlqprkqkrarlcAVHYPALTVsseETVNVSGAGDSFAGAMMVGIL 645
Cdd:cd00287  161 ATRGGT----------------EVHVPAFPV---KVVDTTGAGDAFLAALAAGLA 196
Guanosine_kinase_like cd01947
Guanosine kinase-like sugar kinases. Found in bacteria and archaea, the guanosine kinase-like ...
351-452 1.93e-06

Guanosine kinase-like sugar kinases. Found in bacteria and archaea, the guanosine kinase-like group is part of the ribokinase/pfkB sugar kinase superfamily. Its oligomerization state is unknown at this time.


Pssm-ID: 238922 [Multi-domain]  Cd Length: 265  Bit Score: 50.11  E-value: 1.93e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 351 KTIVIGGINVDFIakGTTKKLLF--GQTNPGSVCQSFGGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYCKHMDTS 428
Cdd:cd01947    1 KIAVVGHVEWDIF--LSLDAPPQpgGISHSSDSRESPGGGGANVAVQLAKLGNDVRFFSNLGRDEIGIQSLEELESGGDK 78
                         90       100
                 ....*....|....*....|....
gi 688616936 429 AVARLQDQRTATYCAVITESGELS 452
Cdd:cd01947   79 HTVAWRDKPTRKTLSFIDPNGERT 102
ribokinase_group_B cd01945
Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ...
355-647 1.90e-05

Ribokinase-like subgroup B. Found in bacteria and plants, this subgroup is part of the ribokinase/pfkB superfamily. Its oligomerization state is unknown at this time. .


Pssm-ID: 238920 [Multi-domain]  Cd Length: 284  Bit Score: 46.90  E-value: 1.90e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 355 IGGINVDFIAKGTTKKLLFGQTNPGSVCQSFGGVGRNIADCLSRLGHKPLFISAIGKDSHSDAVLNYC-KH-MDTSAVAR 432
Cdd:cd01945    5 VGLAVLDLIYLVASFPGGDGKIVATDYAVIGGGNAANAAVAVARLGGQARLIGVVGDDAIGRLILAELaAEgVDTSFIVV 84
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 433 LQDQRTATycAVITESGELSLGLGDMDIHQQIQEQYVSQfvDQLSSASLIVLDGN-IPVSTInyVCRIAKKHAVPVwfeP 511
Cdd:cd01945   85 APGARSPI--SSITDITGDRATISITAIDTQAAPDSLPD--AILGGADAVLVDGRqPEAALH--LAQEARARGIPI---P 155
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 512 TDADKACKPFLSEswkalaftspnLTELCtmnHTLGLPTPAelprsLEDVLGCAPALSRPLLEHLHC--VLVTLGSLGVL 589
Cdd:cd01945  156 LDLDGGGLRVLEE-----------LLPLA---DHAICSENF-----LRPNTGSADDEALELLASLGIpfVAVTLGEAGCL 216
                        250       260       270       280       290
                 ....*....|....*....|....*....|....*....|....*....|....*...
gi 688616936 590 VCgeHEAGTVnlqprkqkrarlcaVHYPALtvsSEETVNVSGAGDSFAGAMMVGILQG 647
Cdd:cd01945  217 WL--ERDGEL--------------FHVPAF---PVEVVDTTGAGDVFHGAFAHALAEG 255
FruK_PfkB_like cd01164
1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. ...
386-648 9.60e-05

1-phosphofructokinase (FruK), minor 6-phosphofructokinase (pfkB) and related sugar kinases. FruK plays an important role in the predominant pathway for fructose utilisation.This group also contains tagatose-6-phophate kinase, an enzyme of the tagatose 6-phosphate pathway, which responsible for breakdown of the galactose moiety during lactose metabolism by bacteria such as L. lactis.


Pssm-ID: 238570 [Multi-domain]  Cd Length: 289  Bit Score: 44.83  E-value: 9.60e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 386 GGVGRNIADCLSRLGHKPLFISAIGKDsHSDAVLNYCKH--MDTSAVARLQDQRTATycAVITESGELS--LGLGdMDIH 461
Cdd:cd01164   36 GGKGINVARVLKDLGVEVTALGFLGGF-TGDFFEALLKEegIPDDFVEVAGETRINV--KIKEEDGTETeiNEPG-PEIS 111
                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 462 QQIQEQYVSQFVDQLSSASLIVLDG----NIPVSTINYVCRIAKKHAVPVWFeptDADK-------ACKPFLseswkala 530
Cdd:cd01164  112 EEELEALLEKLKALLKKGDIVVLSGslppGVPADFYAELVRLAREKGARVIL---DTSGeallaalAAKPFL-------- 180
                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 531 fTSPNLTELCTM-NHTLGlptpaelprSLEDVLgcaPALSRPLLEHLHCVLVTLGSLGVLVCGEHEAGTVNLqprkqkra 609
Cdd:cd01164  181 -IKPNREELEELfGRPLG---------DEEDVI---AAARKLIERGAENVLVSLGADGALLVTKDGVYRASP-------- 239
                        250       260       270
                 ....*....|....*....|....*....|....*....
gi 688616936 610 rlcavhyPALTVSSeeTVnvsGAGDSFAGAMMVGILQGL 648
Cdd:cd01164  240 -------PKVKVVS--TV---GAGDSMVAGFVAGLAQGL 266
MAK32 cd01943
MAK32 kinase. MAK32 is a protein found primarily in fungi that is necessary for the ...
507-661 6.20e-04

MAK32 kinase. MAK32 is a protein found primarily in fungi that is necessary for the structural stability of L-A particles. The L-A virus particule is a specialized compartment for the transcription and replication of double-stranded RNA, known to infect yeast and other fungi. MAK32 is part of the host machinery used by the virus to multiply.


Pssm-ID: 238918 [Multi-domain]  Cd Length: 328  Bit Score: 42.71  E-value: 6.20e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 688616936 507 VWfEPTDADkaCKPFLSESWKAL----AFTSPNLTELCTMnhtLGLPTPAELPRSLEDVLGCAPALSRPLLEHLHCVLVT 582
Cdd:cd01943  158 VW-EPLPDS--CDPENLEDLLQAlprvDVFSPNLEEAARL---LGLPTSEPSSDEEKEAVLQALLFSGILQDPGGGVVLR 231
                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 688616936 583 LGSLGVLVCgeheagtvnlqprkqKRARLCAVHYPALTVSSEETVNVSGAGDSFAGAMMVGIlqgLHTDSCVQMGLLAA 661
Cdd:cd01943  232 CGKLGCYVG---------------SADSGPELWLPAYHTKSTKVVDPTGGGNSFLGGFAAGL---ALTKSIDEACIYGS 292
PRK09813 PRK09813
fructoselysine 6-kinase; Provisional
625-670 6.37e-04

fructoselysine 6-kinase; Provisional


Pssm-ID: 182090 [Multi-domain]  Cd Length: 260  Bit Score: 42.03  E-value: 6.37e-04
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*.
gi 688616936 625 ETVNVSGAGDSFAGAMMVGILQGLHTDSCVQMGLLAARRSLLTPHP 670
Cdd:PRK09813 214 TVVDTMGAGDSFIAGFLCGWLAGMTLPQAMAQGTACAAKTIQYHGA 259
PLN02548 PLN02548
adenosine kinase
616-662 4.12e-03

adenosine kinase


Pssm-ID: 178163 [Multi-domain]  Cd Length: 332  Bit Score: 40.08  E-value: 4.12e-03
                         10        20        30        40
                 ....*....|....*....|....*....|....*....|....*..
gi 688616936 616 YPALTVSSEETVNVSGAGDSFAGAMMVGILQGLHTDSCVQMGLLAAR 662
Cdd:PLN02548 269 FPVIPLPKEKLVDTNGAGDAFVGGFLSQLVQGKDIEECVRAGNYAAN 315
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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