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Conserved domains on  [gi|755495879|ref|XP_011237164|]
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Fc receptor-like protein 6 isoform X3 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
Ig_C17orf99 super family cl39263
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 128-196 1.56e-06

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


The actual alignment was detected with superfamily member pfam17736:

Pssm-ID: 465476  Cd Length: 95  Bit Score: 45.56  E-value: 1.56e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 755495879  128 GDKVEFLCEAHQGSLPIFYSFY-INGEILGKPLAPSGRAA--SLLASVKAEWSTKNYSCEAKNNISREISEL 196
Cdd:pfam17736  16 GRRVLISCHASQGSPPITYSLVgSDGIVVAKKIPLHGEPAnfSLNITLKSSPDLLTYQCQAANTSGTQVSSL 87
Ig_2 pfam13895
Immunoglobulin domain; This domain contains immunoglobulin-like domains.
 22-100 1.11e-05

Immunoglobulin domain; This domain contains immunoglobulin-like domains.


:

Pssm-ID: 464026 [Multi-domain]  Cd Length: 79  Bit Score: 42.77  E-value: 1.11e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 755495879   22 NPELTEFTNSETmdVILKCTIkvdPKNPTLQlfYTFYKNNHVIQDRSPHSVFSAEakEENSGLYQCMVDTEDGLIQKKS 100
Cdd:pfam13895   5 TPSPTVVTEGEP--VTLTCSA---PGNPPPS--YTWYKDGSAISSSPNFFTLSVS--AEDSGTYTCVARNGRGGKVSNP 74
 
Name Accession Description Interval E-value
Ig_C17orf99 pfam17736
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 128-196 1.56e-06

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


Pssm-ID: 465476  Cd Length: 95  Bit Score: 45.56  E-value: 1.56e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 755495879  128 GDKVEFLCEAHQGSLPIFYSFY-INGEILGKPLAPSGRAA--SLLASVKAEWSTKNYSCEAKNNISREISEL 196
Cdd:pfam17736  16 GRRVLISCHASQGSPPITYSLVgSDGIVVAKKIPLHGEPAnfSLNITLKSSPDLLTYQCQAANTSGTQVSSL 87
Ig_2 pfam13895
Immunoglobulin domain; This domain contains immunoglobulin-like domains.
 22-100 1.11e-05

Immunoglobulin domain; This domain contains immunoglobulin-like domains.


Pssm-ID: 464026 [Multi-domain]  Cd Length: 79  Bit Score: 42.77  E-value: 1.11e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 755495879   22 NPELTEFTNSETmdVILKCTIkvdPKNPTLQlfYTFYKNNHVIQDRSPHSVFSAEakEENSGLYQCMVDTEDGLIQKKS 100
Cdd:pfam13895   5 TPSPTVVTEGEP--VTLTCSA---PGNPPPS--YTWYKDGSAISSSPNFFTLSVS--AEDSGTYTCVARNGRGGKVSNP 74
 
Name Accession Description Interval E-value
Ig_C17orf99 pfam17736
C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein ...
 128-196 1.56e-06

C17orf99 Ig domain; This Ig domain is found in tandem in the uncharacterized human protein C17orf99, which is found across mammalian species.


Pssm-ID: 465476  Cd Length: 95  Bit Score: 45.56  E-value: 1.56e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 755495879  128 GDKVEFLCEAHQGSLPIFYSFY-INGEILGKPLAPSGRAA--SLLASVKAEWSTKNYSCEAKNNISREISEL 196
Cdd:pfam17736  16 GRRVLISCHASQGSPPITYSLVgSDGIVVAKKIPLHGEPAnfSLNITLKSSPDLLTYQCQAANTSGTQVSSL 87
Ig_2 pfam13895
Immunoglobulin domain; This domain contains immunoglobulin-like domains.
 22-100 1.11e-05

Immunoglobulin domain; This domain contains immunoglobulin-like domains.


Pssm-ID: 464026 [Multi-domain]  Cd Length: 79  Bit Score: 42.77  E-value: 1.11e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 755495879   22 NPELTEFTNSETmdVILKCTIkvdPKNPTLQlfYTFYKNNHVIQDRSPHSVFSAEakEENSGLYQCMVDTEDGLIQKKS 100
Cdd:pfam13895   5 TPSPTVVTEGEP--VTLTCSA---PGNPPPS--YTWYKDGSAISSSPNFFTLSVS--AEDSGTYTCVARNGRGGKVSNP 74
Ig_3 pfam13927
Immunoglobulin domain; This family contains immunoglobulin-like domains.
 114-187 2.55e-04

Immunoglobulin domain; This family contains immunoglobulin-like domains.


Pssm-ID: 464046 [Multi-domain]  Cd Length: 78  Bit Score: 38.70  E-value: 2.55e-04
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 755495879  114 PVLTLQHEATNLAVGDKVEFLCEAHQGSLPIFYSFYINGEILGKPLAPSGRAAS----LLASVKAEWSTkNYSCEAKN 187
Cdd:pfam13927   2 PVITVSPSSVTVREGETVTLTCEATGSPPPTITWYKNGEPISSGSTRSRSLSGSnstlTISNVTRSDAG-TYTCVASN 78
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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