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Conserved domains on  [gi|755499138|ref|XP_011237723|]
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coiled-coil domain-containing protein 9B isoform X2 [Mus musculus]

Protein Classification

CCDC9 family protein( domain architecture ID 10633754)

CCDC9 family protein is a DUF4594 domain-containing protein similar to Homo sapiens coiled-coil domain-containing protein 9B

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4594 pfam15266
Domain of unknown function (DUF4594); This protein family is a domain of unknown function. The ...
 185-285 2.88e-43

Domain of unknown function (DUF4594); This protein family is a domain of unknown function. The protein family is found in eukaryotes, and is typically between 170 and 183 amino acids in length.In humans, the gene encoding this protein lies in the position, chromosome 15 open reading frame 52.


:

Pssm-ID: 464604 [Multi-domain]  Cd Length: 177  Bit Score: 146.07  E-value: 2.88e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755499138  185 TTQARSPRAKGTSGGGRSWRAPLQMTSSSDSAGKGVLEPRSPGVVSsPPPQQSLGLspEASWDYTQWKQEREQIDLARLA 264
Cdd:pfam15266   1 PTRARRDRAEGSRGGGRNWSGPDQMAVSSDSEQKGAREPRSPGLVG-PGPTLSMTG--RERWDYARWKQEREQIDLARLA 77

                          90       100
                  ....*....|....*....|.
gi 755499138  265 RHRNPQGDWSRPWDLDKAKSM 285
Cdd:pfam15266  78 RHRDAQGDWRRPWDLDKAKPM 98
 
Name Accession Description Interval E-value
DUF4594 pfam15266
Domain of unknown function (DUF4594); This protein family is a domain of unknown function. The ...
 185-285 2.88e-43

Domain of unknown function (DUF4594); This protein family is a domain of unknown function. The protein family is found in eukaryotes, and is typically between 170 and 183 amino acids in length.In humans, the gene encoding this protein lies in the position, chromosome 15 open reading frame 52.


Pssm-ID: 464604 [Multi-domain]  Cd Length: 177  Bit Score: 146.07  E-value: 2.88e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755499138  185 TTQARSPRAKGTSGGGRSWRAPLQMTSSSDSAGKGVLEPRSPGVVSsPPPQQSLGLspEASWDYTQWKQEREQIDLARLA 264
Cdd:pfam15266   1 PTRARRDRAEGSRGGGRNWSGPDQMAVSSDSEQKGAREPRSPGLVG-PGPTLSMTG--RERWDYARWKQEREQIDLARLA 77

                          90       100
                  ....*....|....*....|.
gi 755499138  265 RHRNPQGDWSRPWDLDKAKSM 285
Cdd:pfam15266  78 RHRDAQGDWRRPWDLDKAKPM 98
 
Name Accession Description Interval E-value
DUF4594 pfam15266
Domain of unknown function (DUF4594); This protein family is a domain of unknown function. The ...
 185-285 2.88e-43

Domain of unknown function (DUF4594); This protein family is a domain of unknown function. The protein family is found in eukaryotes, and is typically between 170 and 183 amino acids in length.In humans, the gene encoding this protein lies in the position, chromosome 15 open reading frame 52.


Pssm-ID: 464604 [Multi-domain]  Cd Length: 177  Bit Score: 146.07  E-value: 2.88e-43
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 755499138  185 TTQARSPRAKGTSGGGRSWRAPLQMTSSSDSAGKGVLEPRSPGVVSsPPPQQSLGLspEASWDYTQWKQEREQIDLARLA 264
Cdd:pfam15266   1 PTRARRDRAEGSRGGGRNWSGPDQMAVSSDSEQKGAREPRSPGLVG-PGPTLSMTG--RERWDYARWKQEREQIDLARLA 77

                          90       100
                  ....*....|....*....|.
gi 755499138  265 RHRNPQGDWSRPWDLDKAKSM 285
Cdd:pfam15266  78 RHRDAQGDWRRPWDLDKAKPM 98
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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