|
Name |
Accession |
Description |
Interval |
E-value |
| PL48 |
pfam15903 |
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific ... |
97-445 |
0e+00 |
|
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific HL-60 cell differentiation. The N-terminal part of the family is found to induce the formation of filopodia. It is found in vertebrates.
:
Pssm-ID: 464930 Cd Length: 297 Bit Score: 551.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 97 VSRSQSFAGVLGSHERgpRSFTVFSPPGPPRKPLvlSRVSRMFSVAH---PAPKVPQPERLDLVYTALKRGLTAYLEVHQ 173
Cdd:pfam15903 1 ITRSQSFAGFSSAQER--RNLSSFSRPSLRSKPP--SKSSRMFTSSHksgPPPKVPQPERVDRVYEALKKGLKEYLEVHQ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 174 QEQEKLQRQIKESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKidelyeaycvqrrlrdgaynmvraystgspgsrea 253
Cdd:pfam15903 77 AELDKLSRQQKDTKRNSRLGFLYDLDKQIKSVERYIRRLEFHISK----------------------------------- 121
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 254 rdslaeatrghreyteSMCLLENELEAQLGEFHLRMKGLAGFARLCVGDQYEICMKYGRQRWKLRGRIESSGKQVWDSEE 333
Cdd:pfam15903 122 ----------------DMCLLEGELENLLGEFHIKMKGLAGFARLCPGDQYEVLMRYGRQRWKLRGRIETDDKQVWDEEE 185
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 334 TVFLPLLTEFLSIKVTELKGLANHVVVGSVSCETKDLFAALPQVVAVDINDLGTIKLSLEVIWSPFDKDDQPSAASTVNK 413
Cdd:pfam15903 186 MVFLPLIHENFEIKVTELKGLANHVLVGSVTCETKDLFAARPQVVAVDINDLGTIKLQLEVTWNPFDKEDQLPSASSVSK 265
|
330 340 350
....*....|....*....|....*....|..
gi 1907191560 414 ASTVTKRFSTYSQSPPDTPSLREQAFYNMLRR 445
Cdd:pfam15903 266 ASVVSRRGSVYSWTPPDTPSFREKYFLSMLRQ 297
|
|
| Herpes_BLLF1 super family |
cl37540 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
524-829 |
5.88e-11 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
The actual alignment was detected with superfamily member pfam05109:
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 67.25 E-value: 5.88e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 524 SRTLSHISEASVDAALTEAVEAVdSQSPIPGPSPLVYPDSTHVERVSSVLPVLNNGHSATSPALST---TGPAP------ 594
Cdd:pfam05109 406 TRTATNATTTTHKVIFSKAPEST-TTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTadvTSPTPagttsg 484
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 595 -TFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSPLtstgSVPNATdstq 673
Cdd:pfam05109 485 aSPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTT----PTPNAT---- 556
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 674 aTPSPTHSTPSPTHTTIRLTHTT-----VSPTHSSPSPIHTTPSPTHTTVSPTCTTPSSGHSTTSPTQEAkMSTHTTGAV 748
Cdd:pfam05109 557 -SPTPAVTTPTPNATIPTLGKTSptsavTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNA-TSAVTTGQH 634
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 749 GPVQTTTS-----PISTTESPSPSTdvaiissssaesTGPGTEPLPCSHPASPP----YTKADPTASCTSYQSLASSGSK 819
Cdd:pfam05109 635 NITSSSTSsmslrPSSISETLSPST------------SDNSTSHMPLLTSAHPTggenITQVTPASTSTHHVSTSSPAPR 702
|
330
....*....|
gi 1907191560 820 PLTSPAPDSP 829
Cdd:pfam05109 703 PGTTSQASGP 712
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1149-1270 |
4.31e-07 |
|
HEAT repeat [General function prediction only];
:
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 50.40 E-value: 4.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 1149 LLVQNLNSDDQAVVLKALRLApeGRLR-KDGLRALSSLLVHGNNKVMAAVStqlrsLSLGPVFRERALLCFLDQLEDGDV 1227
Cdd:COG1413 20 ALIAALADEDPDVRAAAARAL--GRLGdPRAVPALLEALKDPDPEVRAAAA-----EALGRIGDPEAVPALIAALKDEDP 92
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1907191560 1228 QTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQ 1270
Cdd:COG1413 93 EVRRAAAEALGRLGDPAAVPALLEALKDPDWEVRRAAARALGR 135
|
|
| HR1 super family |
cl00087 |
Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small ... |
218-285 |
5.48e-04 |
|
Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases; The HR1 domain, also called the ACC (anti-parallel coiled-coil) finger domain or Rho-binding domain binds small GTPases from the Rho family. It is found in Rho effector proteins including PKC-related kinases such as vertebrate PRK1 (or PKN) and yeast PKC1 protein kinases C, as well as in rhophilins and Rho-associated kinase (ROCK). Rho family members function as molecular switches, cycling between inactive and active forms, controlling a variety of cellular processes. HR1 domains may occur in repeat arrangements (PKN contains three HR1 domains), separated by a short linker region.
The actual alignment was detected with superfamily member cd11636:
Pssm-ID: 469609 Cd Length: 74 Bit Score: 39.96 E-value: 5.48e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907191560 218 KIDELYEAYCVQRRLRDGAYNMVRAYSTGSPGSREArdsLAEATRGHREYTESMCLLENELEAQLGEF 285
Cdd:cd11636 10 RIEELRHHFRVEHAVAEGAKNVLRLLGAGKAQDRKA---ISEAQSKLSESSQKLDLLRVSLEQRLVEL 74
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PL48 |
pfam15903 |
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific ... |
97-445 |
0e+00 |
|
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific HL-60 cell differentiation. The N-terminal part of the family is found to induce the formation of filopodia. It is found in vertebrates.
Pssm-ID: 464930 Cd Length: 297 Bit Score: 551.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 97 VSRSQSFAGVLGSHERgpRSFTVFSPPGPPRKPLvlSRVSRMFSVAH---PAPKVPQPERLDLVYTALKRGLTAYLEVHQ 173
Cdd:pfam15903 1 ITRSQSFAGFSSAQER--RNLSSFSRPSLRSKPP--SKSSRMFTSSHksgPPPKVPQPERVDRVYEALKKGLKEYLEVHQ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 174 QEQEKLQRQIKESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKidelyeaycvqrrlrdgaynmvraystgspgsrea 253
Cdd:pfam15903 77 AELDKLSRQQKDTKRNSRLGFLYDLDKQIKSVERYIRRLEFHISK----------------------------------- 121
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 254 rdslaeatrghreyteSMCLLENELEAQLGEFHLRMKGLAGFARLCVGDQYEICMKYGRQRWKLRGRIESSGKQVWDSEE 333
Cdd:pfam15903 122 ----------------DMCLLEGELENLLGEFHIKMKGLAGFARLCPGDQYEVLMRYGRQRWKLRGRIETDDKQVWDEEE 185
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 334 TVFLPLLTEFLSIKVTELKGLANHVVVGSVSCETKDLFAALPQVVAVDINDLGTIKLSLEVIWSPFDKDDQPSAASTVNK 413
Cdd:pfam15903 186 MVFLPLIHENFEIKVTELKGLANHVLVGSVTCETKDLFAARPQVVAVDINDLGTIKLQLEVTWNPFDKEDQLPSASSVSK 265
|
330 340 350
....*....|....*....|....*....|..
gi 1907191560 414 ASTVTKRFSTYSQSPPDTPSLREQAFYNMLRR 445
Cdd:pfam15903 266 ASVVSRRGSVYSWTPPDTPSFREKYFLSMLRQ 297
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
524-829 |
5.88e-11 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 67.25 E-value: 5.88e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 524 SRTLSHISEASVDAALTEAVEAVdSQSPIPGPSPLVYPDSTHVERVSSVLPVLNNGHSATSPALST---TGPAP------ 594
Cdd:pfam05109 406 TRTATNATTTTHKVIFSKAPEST-TTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTadvTSPTPagttsg 484
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 595 -TFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSPLtstgSVPNATdstq 673
Cdd:pfam05109 485 aSPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTT----PTPNAT---- 556
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 674 aTPSPTHSTPSPTHTTIRLTHTT-----VSPTHSSPSPIHTTPSPTHTTVSPTCTTPSSGHSTTSPTQEAkMSTHTTGAV 748
Cdd:pfam05109 557 -SPTPAVTTPTPNATIPTLGKTSptsavTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNA-TSAVTTGQH 634
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 749 GPVQTTTS-----PISTTESPSPSTdvaiissssaesTGPGTEPLPCSHPASPP----YTKADPTASCTSYQSLASSGSK 819
Cdd:pfam05109 635 NITSSSTSsmslrPSSISETLSPST------------SDNSTSHMPLLTSAHPTggenITQVTPASTSTHHVSTSSPAPR 702
|
330
....*....|
gi 1907191560 820 PLTSPAPDSP 829
Cdd:pfam05109 703 PGTTSQASGP 712
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1149-1270 |
4.31e-07 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 50.40 E-value: 4.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 1149 LLVQNLNSDDQAVVLKALRLApeGRLR-KDGLRALSSLLVHGNNKVMAAVStqlrsLSLGPVFRERALLCFLDQLEDGDV 1227
Cdd:COG1413 20 ALIAALADEDPDVRAAAARAL--GRLGdPRAVPALLEALKDPDPEVRAAAA-----EALGRIGDPEAVPALIAALKDEDP 92
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1907191560 1228 QTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQ 1270
Cdd:COG1413 93 EVRRAAAEALGRLGDPAAVPALLEALKDPDWEVRRAAARALGR 135
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
579-789 |
1.56e-06 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 52.45 E-value: 1.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 579 GHSATSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSP 658
Cdd:COG3469 8 ASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 659 LTSTGSVPNATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPTHSSPSPIHTTPSpthttVSPTCTTPSSGHSTTSPTQEA 738
Cdd:COG3469 88 AATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASAT-----SSAGSTTTTTTVSGTETATGG 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1907191560 739 KMSTHTTGAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLP 789
Cdd:COG3469 163 TTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLP 213
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
721-823 |
3.91e-04 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 43.74 E-value: 3.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 721 TCTTPSSGhSTTSPTQEAKMSTHTTGAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLPCSHPASPPYTK 800
Cdd:PHA03255 25 TSSGSSTA-SAGNVTGTTAVTTPSPSASGPSTNQSTTLTTTSAPITTTAILSTNTTTVTSTGTTVTPVPTTSNASTINVT 103
|
90 100
....*....|....*....|...
gi 1907191560 801 ADPTASCTSYQSLASSGSKPLTS 823
Cdd:PHA03255 104 TKVTAQNITATEAGTGTSTGVTS 126
|
|
| HR1_PKN1_3 |
cd11636 |
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein ... |
218-285 |
5.48e-04 |
|
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N1; PKN1, also called PKNalpha or Protein-kinase C-related kinase 1 (PRK1), is a serine/threonine protein kinase that is activated by the Rho family of small GTPases, and by fatty acids such as arachidonic and linoleic acids. It is expressed ubiquitously and is the most abundant PKN isoform in neurons. PKN1 is implicated in a variety of functions including cytoskeletal reorganization, cardiac cell survival, cell adhesion, and glucose transport, among others. PKN1 contains three HR1 domains, a C2 domain, and a kinase domain. This model characterizes the third HR1 domain of PKN1. HR1 domains are anti-parallel coiled-coil (ACC) domains that bind small GTPases from the Rho family; PKN1 binds the GTPases RhoA, RhoB, and RhoC, and can also interact weakly with Rac.
Pssm-ID: 212026 Cd Length: 74 Bit Score: 39.96 E-value: 5.48e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907191560 218 KIDELYEAYCVQRRLRDGAYNMVRAYSTGSPGSREArdsLAEATRGHREYTESMCLLENELEAQLGEF 285
Cdd:cd11636 10 RIEELRHHFRVEHAVAEGAKNVLRLLGAGKAQDRKA---ISEAQSKLSESSQKLDLLRVSLEQRLVEL 74
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
1179-1269 |
5.97e-04 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 40.01 E-value: 5.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 1179 LRALSSLLVHGNNKVMAAVSTQlrslSLGPVFRERALLCFLDQLEDGDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTE 1258
Cdd:pfam13646 1 LPALLQALLRDPDPEVRAAAIR----ALGRIGDPEAVPALLELLKDEDPAVRRAAAEALGKIGDPEALPALLELLRDDDD 76
|
90
....*....|..
gi 1907191560 1259 A-VREAARQSLQ 1269
Cdd:pfam13646 77 DvVRAAAAEALA 88
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PL48 |
pfam15903 |
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific ... |
97-445 |
0e+00 |
|
Filopodia upregulated, FAM65; PL48 is associated with cytotrophoblast and lineage-specific HL-60 cell differentiation. The N-terminal part of the family is found to induce the formation of filopodia. It is found in vertebrates.
Pssm-ID: 464930 Cd Length: 297 Bit Score: 551.62 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 97 VSRSQSFAGVLGSHERgpRSFTVFSPPGPPRKPLvlSRVSRMFSVAH---PAPKVPQPERLDLVYTALKRGLTAYLEVHQ 173
Cdd:pfam15903 1 ITRSQSFAGFSSAQER--RNLSSFSRPSLRSKPP--SKSSRMFTSSHksgPPPKVPQPERVDRVYEALKKGLKEYLEVHQ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 174 QEQEKLQRQIKESKRNSRLGFLYDLDKQVKSIERFLRRLEFHASKidelyeaycvqrrlrdgaynmvraystgspgsrea 253
Cdd:pfam15903 77 AELDKLSRQQKDTKRNSRLGFLYDLDKQIKSVERYIRRLEFHISK----------------------------------- 121
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 254 rdslaeatrghreyteSMCLLENELEAQLGEFHLRMKGLAGFARLCVGDQYEICMKYGRQRWKLRGRIESSGKQVWDSEE 333
Cdd:pfam15903 122 ----------------DMCLLEGELENLLGEFHIKMKGLAGFARLCPGDQYEVLMRYGRQRWKLRGRIETDDKQVWDEEE 185
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 334 TVFLPLLTEFLSIKVTELKGLANHVVVGSVSCETKDLFAALPQVVAVDINDLGTIKLSLEVIWSPFDKDDQPSAASTVNK 413
Cdd:pfam15903 186 MVFLPLIHENFEIKVTELKGLANHVLVGSVTCETKDLFAARPQVVAVDINDLGTIKLQLEVTWNPFDKEDQLPSASSVSK 265
|
330 340 350
....*....|....*....|....*....|..
gi 1907191560 414 ASTVTKRFSTYSQSPPDTPSLREQAFYNMLRR 445
Cdd:pfam15903 266 ASVVSRRGSVYSWTPPDTPSFREKYFLSMLRQ 297
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
524-829 |
5.88e-11 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 67.25 E-value: 5.88e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 524 SRTLSHISEASVDAALTEAVEAVdSQSPIPGPSPLVYPDSTHVERVSSVLPVLNNGHSATSPALST---TGPAP------ 594
Cdd:pfam05109 406 TRTATNATTTTHKVIFSKAPEST-TTSPTLNTTGFAAPNTTTGLPSSTHVPTNLTAPASTGPTVSTadvTSPTPagttsg 484
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 595 -TFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSPLtstgSVPNATdstq 673
Cdd:pfam05109 485 aSPVTPSPSPRDNGTESKAPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTT----PTPNAT---- 556
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 674 aTPSPTHSTPSPTHTTIRLTHTT-----VSPTHSSPSPIHTTPSPTHTTVSPTCTTPSSGHSTTSPTQEAkMSTHTTGAV 748
Cdd:pfam05109 557 -SPTPAVTTPTPNATIPTLGKTSptsavTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSPPKNA-TSAVTTGQH 634
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 749 GPVQTTTS-----PISTTESPSPSTdvaiissssaesTGPGTEPLPCSHPASPP----YTKADPTASCTSYQSLASSGSK 819
Cdd:pfam05109 635 NITSSSTSsmslrPSSISETLSPST------------SDNSTSHMPLLTSAHPTggenITQVTPASTSTHHVSTSSPAPR 702
|
330
....*....|
gi 1907191560 820 PLTSPAPDSP 829
Cdd:pfam05109 703 PGTTSQASGP 712
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1149-1270 |
4.31e-07 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 50.40 E-value: 4.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 1149 LLVQNLNSDDQAVVLKALRLApeGRLR-KDGLRALSSLLVHGNNKVMAAVStqlrsLSLGPVFRERALLCFLDQLEDGDV 1227
Cdd:COG1413 20 ALIAALADEDPDVRAAAARAL--GRLGdPRAVPALLEALKDPDPEVRAAAA-----EALGRIGDPEAVPALIAALKDEDP 92
|
90 100 110 120
....*....|....*....|....*....|....*....|...
gi 1907191560 1228 QTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQ 1270
Cdd:COG1413 93 EVRRAAAEALGRLGDPAAVPALLEALKDPDWEVRRAAARALGR 135
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
579-789 |
1.56e-06 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 52.45 E-value: 1.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 579 GHSATSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSP 658
Cdd:COG3469 8 ASPTAGGASATAVTLLGAAATAASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAA 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 659 LTSTGSVPNATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPTHSSPSPIHTTPSpthttVSPTCTTPSSGHSTTSPTQEA 738
Cdd:COG3469 88 AATSTSATLVATSTASGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASAT-----SSAGSTTTTTTVSGTETATGG 162
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1907191560 739 KMSTHTTGAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLP 789
Cdd:COG3469 163 TTTTSTTTTTTSASTTPSATTTATATTASGATTPSATTTATTTGPPTPGLP 213
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
520-831 |
1.61e-06 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 52.27 E-value: 1.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 520 HAPYSRTLSH--ISEASVDAALTEAVEAVDSQSPIPG----PSPLVYPDSTHVERVSSVLPVLNNghSATSPALSTTGPA 593
Cdd:pfam17823 90 HTPHGTDLSEpaTREGAADGAASRALAAAASSSPSSAaqslPAAIAALPSEAFSAPRAAACRANA--SAAPRAAIAAASA 167
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 594 PTFIDPAPTTQldlvhKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSPLTSTGS---VPNATD 670
Cdd:pfam17823 168 PHAASPAPRTA-----ASSTTAASSTTAASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNsspAAGTVT 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 671 STQATPSP----THSTPSPTHTTIRLTHTTVSPTHSSPSPIHTtpspthttvSPTCTTPSSGHSTTSPTQEAKMSTHTTG 746
Cdd:pfam17823 243 AAVGTVTPaalaTLAAAAGTVASAAGTINMGDPHARRLSPAKH---------MPSDTMARNPAAPMGAQAQGPIIQVSTD 313
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 747 AvgPVQTTT-----SPISTTESPSPSTDVAIISSSSAESTGPGTEPlPCSHPASPPYTKADPTASCTSyqslassgskPL 821
Cdd:pfam17823 314 Q--PVHNTAgeptpSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKE-PSASPVPVLHTSMIPEVEATS----------PT 380
|
330
....*....|
gi 1907191560 822 TSPAPDSPEQ 831
Cdd:pfam17823 381 TQPSPLLPTQ 390
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1172-1287 |
2.03e-06 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 48.47 E-value: 2.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 1172 GRLR-KDGLRALSSLLVHGNNKV-MAAVStqlrslSLGPVFRERALLCFLDQLEDGDVQTRVAGCLALGCIKAPEGIEPL 1249
Cdd:COG1413 10 GRLGdPAAVPALIAALADEDPDVrAAAAR------ALGRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGDPEAVPAL 83
|
90 100 110
....*....|....*....|....*....|....*...
gi 1907191560 1250 VYLCQTDTEAVREAARQSLQQCGEEgqSAHRQLEESLD 1287
Cdd:COG1413 84 IAALKDEDPEVRRAAAEALGRLGDP--AAVPALLEALK 119
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
527-770 |
6.66e-06 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 50.52 E-value: 6.66e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 527 LSHISEASVDAALTEAVEAVDSQSPIPGPSPLVYPDSTHVErVSSVLPVLNNGHSATSPALSTTGPAPTfidpAPTTQLD 606
Cdd:COG3469 1 SSSVSTAASPTAGGASATAVTLLGAAATAASVTLTAATATT-VVSTTGSVVVAASGSAGSGTGTTAASS----TAATSST 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 607 LVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAhtttpspLTSTGSVPNATDSTQATPSPTHSTPSPT 686
Cdd:COG3469 76 TSTTATATAAAAAATSTSATLVATSTASGANTGTSTVTTTSTGAG-------SVTSTTSSTAGSTTTSGASATSSAGSTT 148
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 687 HTTIRLTHTTVSPThsspspihttpspthTTVSPTCTTPSSGHSTTSPTqeakmSTHTTGAVGPVQTTTSPISTTESPSP 766
Cdd:COG3469 149 TTTTVSGTETATGG---------------TTTTSTTTTTTSASTTPSAT-----TTATATTASGATTPSATTTATTTGPP 208
|
....
gi 1907191560 767 STDV 770
Cdd:COG3469 209 TPGL 212
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
582-863 |
2.50e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 48.42 E-value: 2.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 582 ATSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAP--------SELPSITHTTTSSAYSAV-----SLVNSVPSLTSTTI 648
Cdd:pfam17823 66 APAPVTLTKGTSAAHLNSTEVTAEHTPHGTDLSEPatregaadGAASRALAAAASSSPSSAaqslpAAIAALPSEAFSAP 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 649 GSAHTTTPSPLTSTGSVPNATDSTQATPSPTHSTPSPT--HTTIRLTHTTVSPTHSSPS---PIHTTPSPTHTTVSPTCT 723
Cdd:pfam17823 146 RAAACRANASAAPRAAIAAASAPHAASPAPRTAASSTTaaSSTTAASSAPTTAASSAPAtltPARGISTAATATGHPAAG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 724 TPSS--GHSTTSP-TQEAKMSTHTTGAVGPVQT-------------TTSPISTTESPSPSTDVAIISSSSAESTGPGTEp 787
Cdd:pfam17823 226 TALAavGNSSPAAgTVTAAVGTVTPAALATLAAaagtvasaagtinMGDPHARRLSPAKHMPSDTMARNPAAPMGAQAQ- 304
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907191560 788 lpcshpasppytkaDPTASCTSYQSLASSGSKPLTSPAPDSPEQIPKSPSSSPSSSAPEPQHSEHNLAAVAQAPVP 863
Cdd:pfam17823 305 --------------GPIIQVSTDQPVHNTAGEPTPSPSNTTLEPNTPKSVASTNLAVVTTTKAQAKEPSASPVPVL 366
|
|
| DUF5585 |
pfam17823 |
Family of unknown function (DUF5585); This is a family of unknown function found in chordata. |
473-768 |
3.95e-05 |
|
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
Pssm-ID: 465521 [Multi-domain] Cd Length: 506 Bit Score: 48.03 E-value: 3.95e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 473 TARHSTPKPLVQQpepLPVQVAfrRPESLTSGSMDEEPAMTPSLVNGHAPYSRTLShiSEASVDAALTEAVEAVDSQSPI 552
Cdd:pfam17823 117 AAASSSPSSAAQS---LPAAIA--ALPSEAFSAPRAAACRANASAAPRAAIAAASA--PHAASPAPRTAASSTTAASSTT 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 553 PGPSPLVYPDSTHVERVSSVLPVLNNGHSATSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSA-- 630
Cdd:pfam17823 190 AASSAPTTAASSAPATLTPARGISTAATATGHPAAGTALAAVGNSSPAAGTVTAAVGTVTPAALATLAAAAGTVASAAgt 269
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 631 YSAVSLVNSVPSLTSTTigSAHTTTPSPLTSTGSVPNATDSTQATPSPTHST-PSPTHTTIRLTHTTVSPTHSSPSPIHT 709
Cdd:pfam17823 270 INMGDPHARRLSPAKHM--PSDTMARNPAAPMGAQAQGPIIQVSTDQPVHNTaGEPTPSPSNTTLEPNTPKSVASTNLAV 347
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907191560 710 TPSPTHTTVSPTCTTPSSGHST-------TSPTQEAKMSTHTTGAVGP--------VQTTTSPISTTESPSPST 768
Cdd:pfam17823 348 VTTTKAQAKEPSASPVPVLHTSmipeveaTSPTTQPSPLLPTQGAAGPgillapeqVATEATAGTASAGPTPRS 421
|
|
| HEAT |
COG1413 |
HEAT repeat [General function prediction only]; |
1205-1274 |
6.71e-05 |
|
HEAT repeat [General function prediction only];
Pssm-ID: 441023 [Multi-domain] Cd Length: 137 Bit Score: 44.23 E-value: 6.71e-05
10 20 30 40 50 60 70
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 1205 SLGPVFRERALLCFLDQLEDGDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQCGEE 1274
Cdd:COG1413 8 ALGRLGDPAAVPALIAALADEDPDVRAAAARALGRLGDPRAVPALLEALKDPDPEVRAAAAEALGRIGDP 77
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
721-823 |
3.91e-04 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 43.74 E-value: 3.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 721 TCTTPSSGhSTTSPTQEAKMSTHTTGAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLPCSHPASPPYTK 800
Cdd:PHA03255 25 TSSGSSTA-SAGNVTGTTAVTTPSPSASGPSTNQSTTLTTTSAPITTTAILSTNTTTVTSTGTTVTPVPTTSNASTINVT 103
|
90 100
....*....|....*....|...
gi 1907191560 801 ADPTASCTSYQSLASSGSKPLTS 823
Cdd:PHA03255 104 TKVTAQNITATEAGTGTSTGVTS 126
|
|
| HR1_PKN1_3 |
cd11636 |
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein ... |
218-285 |
5.48e-04 |
|
Third Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N1; PKN1, also called PKNalpha or Protein-kinase C-related kinase 1 (PRK1), is a serine/threonine protein kinase that is activated by the Rho family of small GTPases, and by fatty acids such as arachidonic and linoleic acids. It is expressed ubiquitously and is the most abundant PKN isoform in neurons. PKN1 is implicated in a variety of functions including cytoskeletal reorganization, cardiac cell survival, cell adhesion, and glucose transport, among others. PKN1 contains three HR1 domains, a C2 domain, and a kinase domain. This model characterizes the third HR1 domain of PKN1. HR1 domains are anti-parallel coiled-coil (ACC) domains that bind small GTPases from the Rho family; PKN1 binds the GTPases RhoA, RhoB, and RhoC, and can also interact weakly with Rac.
Pssm-ID: 212026 Cd Length: 74 Bit Score: 39.96 E-value: 5.48e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907191560 218 KIDELYEAYCVQRRLRDGAYNMVRAYSTGSPGSREArdsLAEATRGHREYTESMCLLENELEAQLGEF 285
Cdd:cd11636 10 RIEELRHHFRVEHAVAEGAKNVLRLLGAGKAQDRKA---ISEAQSKLSESSQKLDLLRVSLEQRLVEL 74
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
1179-1269 |
5.97e-04 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 40.01 E-value: 5.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 1179 LRALSSLLVHGNNKVMAAVSTQlrslSLGPVFRERALLCFLDQLEDGDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTE 1258
Cdd:pfam13646 1 LPALLQALLRDPDPEVRAAAIR----ALGRIGDPEAVPALLELLKDEDPAVRRAAAEALGKIGDPEALPALLELLRDDDD 76
|
90
....*....|..
gi 1907191560 1259 A-VREAARQSLQ 1269
Cdd:pfam13646 77 DvVRAAAAEALA 88
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
479-864 |
1.43e-03 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 43.22 E-value: 1.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 479 PKPLVQQPEPLPVQVAFRRPESLTSGSMDEEPAM-------------TPSLVNGHAPYSRTLShiSEASVDAALTEAvea 545
Cdd:pfam03154 65 SSKKIKEEAPSPLKSAKRQREKGASDTEEPERATakksktqeisrpnSPSEGEGESSDGRSVN--DEGSSDPKDIDQ--- 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 546 vDSQSPIPG-PSPL---VYPDSTHVERVSSVLPVLNNGHSATSPALSTTGPAPTFI-DPAPTTQLDLVHKTTDSAPSELP 620
Cdd:pfam03154 140 -DNRSTSPSiPSPQdneSDSDSSAQQQILQTQPPVLQAQSGAASPPSPPPPGTTQAaTAGPTPSAPSVPPQGSPATSQPP 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 621 SITHTTTSSaysaVSLVNSVPSLTSTTIGSAHTTTPSPLTSTgsvPNATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPT 700
Cdd:pfam03154 219 NQTQSTAAP----HTLIQQTPTLHPQRLPSPHPPLQPMTQPP---PPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQH 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 701 HSSPSPIHTTPSPTHTTVSPTCTTPSSGHSTTSPTQEAKMSTHTTGAVGPVQT--------------TTSPISTTESPSP 766
Cdd:pfam03154 292 PVPPQPFPLTPQSSQSQVPPGPSPAAPGQSQQRIHTPPSQSQLQSQQPPREQPlppaplsmphikppPTTPIPQLPNPQS 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 767 STDVAIISSSSAESTGPGTEPLPCSHPASPPYTKADPTASCTSYQSLasSGSKPLTSPaPDSPEQIPKSPSSSPSSSAPE 846
Cdd:pfam03154 372 HKHPPHLSGPSPFQMNSNLPPPPALKPLSSLSTHHPPSAHPPPLQLM--PQSQQLPPP-PAQPPVLTQSQSLPPPAASHP 448
|
410
....*....|....*...
gi 1907191560 847 PQHSEHNLAavAQAPVPE 864
Cdd:pfam03154 449 PTSGLHQVP--SQSPFPQ 464
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
679-831 |
1.97e-03 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 41.43 E-value: 1.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 679 THSTPSPTHTTIRLTHTTVS-PTHSSPSPIHTTPSPTHTTVSPTCTTPSSGHSTTSPTqeakmsthTTGAVGPVQTTTSP 757
Cdd:PHA03255 25 TSSGSSTASAGNVTGTTAVTtPSPSASGPSTNQSTTLTTTSAPITTTAILSTNTTTVT--------STGTTVTPVPTTSN 96
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907191560 758 ISTtesPSPSTDVAIISSSSAEsTGPGTEPLPCSHPAsppyTKADPTASCTSYQSLASSGSKPLTSPAPDSPEQ 831
Cdd:PHA03255 97 AST---INVTTKVTAQNITATE-AGTGTSTGVTSNVT----TRSSSTTSATTRITNATTLAPTLSSKGTSNATK 162
|
|
| PHA03255 |
PHA03255 |
BDLF3; Provisional |
583-768 |
2.12e-03 |
|
BDLF3; Provisional
Pssm-ID: 165513 [Multi-domain] Cd Length: 234 Bit Score: 41.43 E-value: 2.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 583 TSPALSTTGPAPTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAysavslvnsvpsLTSTTIGSAHTTTPSPLtst 662
Cdd:PHA03255 20 TSLIWTSSGSSTASAGNVTGTTAVTTPSPSASGPSTNQSTTLTTTSAP------------ITTTAILSTNTTTVTST--- 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 663 gsvpnatdSTQATPSPTHSTPSPTHTTIRLTHTTVSPThsspspihttpspthttvsptcttpSSGHSTTSPTQE--AKM 740
Cdd:PHA03255 85 --------GTTVTPVPTTSNASTINVTTKVTAQNITAT-------------------------EAGTGTSTGVTSnvTTR 131
|
170 180
....*....|....*....|....*...
gi 1907191560 741 STHTTGAvgpvqTTTSPISTTESPSPST 768
Cdd:PHA03255 132 SSSTTSA-----TTRITNATTLAPTLSS 154
|
|
| Chi1 |
COG3469 |
Chitinase [Carbohydrate transport and metabolism]; |
537-734 |
2.90e-03 |
|
Chitinase [Carbohydrate transport and metabolism];
Pssm-ID: 442692 [Multi-domain] Cd Length: 534 Bit Score: 41.66 E-value: 2.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 537 AALTEAVEAVDSQSPIPGPSPLVYPDSTHVERVSSVLPVLNNGHSATSPALSTTGPAPTFIDPAPTTqldlvhkTTDSAP 616
Cdd:COG3469 30 ASVTLTAATATTVVSTTGSVVVAASGSAGSGTGTTAASSTAATSSTTSTTATATAAAAAATSTSATL-------VATSTA 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 617 SELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSPLTSTGSVPNATDSTQATPSPTHSTPSPTHTTIrlTHTT 696
Cdd:COG3469 103 SGANTGTSTVTTTSTGAGSVTSTTSSTAGSTTTSGASATSSAGSTTTTTTVSGTETATGGTTTTSTTTTTTSAS--TTPS 180
|
170 180 190
....*....|....*....|....*....|....*...
gi 1907191560 697 VSPTHSSPSPihttPSPTHTTVSPTcTTPSSGHSTTSP 734
Cdd:COG3469 181 ATTTATATTA----SGATTPSATTT-ATTTGPPTPGLP 213
|
|
| PHA03307 |
PHA03307 |
transcriptional regulator ICP4; Provisional |
493-830 |
3.13e-03 |
|
transcriptional regulator ICP4; Provisional
Pssm-ID: 223039 [Multi-domain] Cd Length: 1352 Bit Score: 42.08 E-value: 3.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 493 VAFRRPESLTSGSMDEEPAMTPSLVNGHAPYSRTLSHISEASVDAALTEAVEAVDSQSPIPGPSPLVYPDSTHVERVSSV 572
Cdd:PHA03307 55 VVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPDL 134
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 573 LPVLNNGHSATSPALSTTGPAPtfiDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSlVNSVPSLTSTTIGSAH 652
Cdd:PHA03307 135 SEMLRPVGSPGPPPAASPPAAG---ASPAAVASDAASSRQAALPLSSPEETARAPSSPPAEPP-PSTPPAAASPRPPRRS 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 653 TTTPSPLTSTGSVP--NATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPTHSSPSPIHTTPSPTHTTVSPTCTTPSSGHS 730
Cdd:PHA03307 211 SPISASASSPAPAPgrSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSS 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 731 TTSPTQEAKMSThttgAVGPVQTTTSPISTTESPSPSTDVAIISSSSAESTGPGTEPLP-CSHPASPPYTKADPTASCTS 809
Cdd:PHA03307 291 PRERSPSPSPSS----PGSGPAPSSPRASSSSSSSRESSSSSTSSSSESSRGAAVSPGPsPSRSPSPSRPPPPADPSSPR 366
|
330 340
....*....|....*....|.
gi 1907191560 810 yQSLASSGSKPLTSPAPDSPE 830
Cdd:PHA03307 367 -KRPRPSRAPSSPAASAGRPT 386
|
|
| Metaviral_G |
pfam09595 |
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. ... |
667-815 |
3.14e-03 |
|
Metaviral_G glycoprotein; This is a viral attachment glycoprotein from region G of metaviruses. It is high in serine and threonine suggesting it is highly glycosylated.
Pssm-ID: 462833 [Multi-domain] Cd Length: 183 Bit Score: 40.32 E-value: 3.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 667 NATDSTQATPSPTHSTPSPTHTTIRLTHTTVSPTHSSPSPiHTTPSPTHTTVSPTCTTPSSGHSTTSPTQEAKMSTHTTG 746
Cdd:pfam09595 46 IITDIIDININKQHPEQEHHENPPLNEAAKEAPSESEDAP-DIDPNNQHPSQDRSEAPPLEPAAKTKPSEHEPANPPDAS 124
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907191560 747 AvgpvqTTTSPISTTESPSPSTdvaiisSSSAESTGPGTEPLPCSHPASPPYTKADPTASCTSYQSLAS 815
Cdd:pfam09595 125 N-----RLSPPDASTAAIREAR------TFRKPSTGKRNNPSSAQSDQSPPRANHEAIGRANPFAMSST 182
|
|
| HEAT_2 |
pfam13646 |
HEAT repeats; This family includes multiple HEAT repeats. |
1222-1287 |
5.29e-03 |
|
HEAT repeats; This family includes multiple HEAT repeats.
Pssm-ID: 433376 [Multi-domain] Cd Length: 88 Bit Score: 37.32 E-value: 5.29e-03
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907191560 1222 LEDGDVQTRVAGCLALGCIKAPEGIEPLVYLCQTDTEAVREAARQSLQQCGEEGQSAHrqLEESLD 1287
Cdd:pfam13646 9 LRDPDPEVRAAAIRALGRIGDPEAVPALLELLKDEDPAVRRAAAEALGKIGDPEALPA--LLELLR 72
|
|
| COG4935 |
COG4935 |
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases ... |
513-770 |
5.53e-03 |
|
Regulatory P domain of the subtilisin-like proprotein convertases and other proteases [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 443962 [Multi-domain] Cd Length: 641 Bit Score: 40.96 E-value: 5.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 513 TPSLVNGHAPYSRTLSHISEASVDAALTEAVEAVDSQSPIPGPSPLVYPDSTHVERVSSVLPVLNNGHSATSPALSTTGP 592
Cdd:COG4935 281 GAGVVGAAAGGGDAALGGAVGAAGTGNAAAAAAASAGSGGGGGSAAAAGAAAAAAAAAAGAAAGVSGAASVVAGASGGGA 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 593 APTFIDPAPTTQLDLVHKTTDSAPSELPSITHTTTSSAYSAVSLVNSVPSLTSTTIGSAHTTTPSPLTSTGSVPNATDST 672
Cdd:COG4935 361 GTAAAAGGGAAAAAAGGAAAAGAAAGAAAGAAAGAAAAGGVASAAGAVGAGTAAGASATAAVSTGAASGSSTTSSTGTTA 440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907191560 673 QATPSPTHSTPSPTHTTIRLTHTTVSPThssPSPIHTTPSPTHTTVSPTCTTPSSGHSTTSPTQEAKMSTHTTGAVGPVQ 752
Cdd:COG4935 441 TATGLGGGADAGSTSTGTGSAAGAAGGT---TTATSGLASSTTAAAAAAAAGLATTAAVAAGAAGAAAAAATAASVGGAT 517
|
250
....*....|....*...
gi 1907191560 753 TTTSPISTTESPSPSTDV 770
Cdd:COG4935 518 GAAGTTNSTATFSNTTDV 535
|
|
| |
