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Conserved domains on  [gi|767943205|ref|XP_011534273|]
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NHS-like protein 1 isoform X12 [Homo sapiens]

Protein Classification

LCP family protein( domain architecture ID 13867071)

LytR-CpsA-Psr (LCP) family protein is implicated in the attachment of anionic polymers to cell wall peptidoglycan in bacteria

Graphical summary

 Zoom to residue level

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List of domain hits

Name Accession Description Interval E-value
NHS pfam15273
NHS-like; This family of proteins includes Nance-Horan syndrome protein (NHS).
266-901 0e+00

NHS-like; This family of proteins includes Nance-Horan syndrome protein (NHS).


:

Pssm-ID: 464606  Cd Length: 654  Bit Score: 758.18  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   266 GQRSETRDSSCQTEDVKVVPPSMRRIRAQKGQGIAAQMGHFSGSSGNMSVLSDSAGIVFPSRLDSDAGFHSLPRSGARAN 345
Cdd:pfam15273    1 GRRSETRDSSCQTEDVKVVPPSRRRIRAQKGQGIAAQMSHSSSSSGNMSVLSDSADIMFSSRLNGDLRFRSLPREGARES 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   346 IQSLEPRLGALGPAGDMNGTFLYQRGHPQADENLGHLGGASGTGTLLRPKSQELRHFESENImSPACVVSPHATYSTSII 425
Cdd:pfam15273   81 LSPLETESFLRGPAERAGTTLPKQSEESQDDQAVHELQGSPRHGLLERPRSQEPRKFADESS-SSPACVSPHAYYSTSII 159
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   426 PNATLSSSSEVIAIPTAQSAGQRESKSSGSSharikSRDHLISRHAVKGDPQSPGRHWNEGHATILSQDLDPHSPGE-PA 504
Cdd:pfam15273  160 GNATISSSSDTISIHTVSTGGVLDSRMDSTN-----DNKAASSRASGKDDHQSSSGNWSGSSSTCPSQTSETIPPASsPP 234
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   505 LLSLCDSAVPLNAPANRENGSQAMPYNCRNNLAFPAHPQDVDGKSESSYSGGGGHSSSEPWEYKSSGNGRASPLKPHLAT 584
Cdd:pfam15273  235 LSSHCDSELSLNTPPHEENDSSGFYYRCHRAASFSSHSQDVDDDSESSYSEGRPASSEEEWEYSAEGNETASPKKPRTAT 314
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   585 PGYSTPTSNMSSCSLDQTSNKEDAGSLYSEDHDGYCASVHTDSGHGSGNLCNSSDGFGNPRHSVINVFVGRAQKNQGDRS 664
Cdd:pfam15273  315 PGLSTPSSNSSSTSEKTPSEKADTSSLYSVDHDGYYTSMHFDSGLKSGKSYNNYAGFGPDRGSSNNVFDGEAQKNQDDSS 394
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   665 NYQDKSLSRNISLKKAKKPPLPPSRTDSLRRIPKKSSQCNGQVLNESLIATLQHSLQLSLPGKSGSSPSQSPCSDLEEPW 744
Cdd:pfam15273  395 GHSDKSLRRSISLKKAKKPPPPPKRTSSLRRPPKKEPKINGQVLLELLIASLQMSLQLNLCGKGGSSESSSLCSDYEEPW 474
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   745 LPRSRSQSTVSAGSSMTSATTPNVYSLCGATPSQSDTSSVKSEYTDPWGYYIDYTGMQEDPGNPAGGCSTSSGVPTGNGP 824
Cdd:pfam15273  475 LRRSRSQSTVSSSSSMSSTTDPNYYSLCVVTPSQSDTSSVKSEYADLWLYYIDLKGASDDPYRSLSNSSTATGTTVIECI 554
                          570       580       590       600       610       620       630
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767943205   825 VRHVQEGSRATMPQVPGGSVKPKIMSPEKSHRVISPSSGYSSQSNTPTALTPVPVFLKSVSPANGKGKPKPKVPERK 901
Cdd:pfam15273  555 KSPESSGSRATTPSVPGVEVKPKLSSPEKLARVTSPSSGYSSQSNTPTSLTPVPFFLGPLSPANGKRKKKPKVPERK 631
PHA03307 super family cl33723
transcriptional regulator ICP4; Provisional
1124-1525 4.02e-08

transcriptional regulator ICP4; Provisional


The actual alignment was detected with superfamily member PHA03307:

Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 58.64  E-value: 4.02e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1124 PSAFLKSRNSTNEMESESQPASVTSSLPTPAKSSSQGDHGSAAERGGPVSRSPGAPSAGEAEARPSPSTTPLPDSSPSRK 1203
Cdd:PHA03307   54 TVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPD 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1204 pppiskkpklflvVPPPQKDFAVEPAENVSEALRAVPSPTTGEEGSVHSREAkeSSAAQAGSHATHPGTSVLE------- 1276
Cdd:PHA03307  134 -------------LSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQA--ALPLSSPEETARAPSSPPAepppstp 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1277 -GGAAGSMSPSRVEANVPMVQPDVSPAPKQEEPAENSADTGGDGESCLSQQDGAAGVPETNAAGSSSEACDFLKEDGNDE 1355
Cdd:PHA03307  199 pAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGP 278
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1356 VMTPSRPRTTEdlfaaihrskrkvlGRRDSDDDHSRNHSPSPPVTPTGAAPSLASPKQVGSIQrSIRKSSTSSDNFKALL 1435
Cdd:PHA03307  279 SSRPGPASSSS--------------SPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSS-STSSSSESSRGAAVSP 343
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1436 LKKGSRSDTSARMSAAemlknTDPRFQRSRSEPSPDAPESPSSCSPSKNRRAQeeWAKNEGLMPRSLSFSGPRyGRSRTP 1515
Cdd:PHA03307  344 GPSPSRSPSPSRPPPP-----ADPSSPRKRPRPSRAPSSPAASAGRPTRRRAR--AAVAGRARRRDATGRFPA-GRPRPS 415
                         410
                  ....*....|
gi 767943205 1516 PSAASSRYSM 1525
Cdd:PHA03307  416 PLDAGAASGA 425
 
Name Accession Description Interval E-value
NHS pfam15273
NHS-like; This family of proteins includes Nance-Horan syndrome protein (NHS).
266-901 0e+00

NHS-like; This family of proteins includes Nance-Horan syndrome protein (NHS).


Pssm-ID: 464606  Cd Length: 654  Bit Score: 758.18  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   266 GQRSETRDSSCQTEDVKVVPPSMRRIRAQKGQGIAAQMGHFSGSSGNMSVLSDSAGIVFPSRLDSDAGFHSLPRSGARAN 345
Cdd:pfam15273    1 GRRSETRDSSCQTEDVKVVPPSRRRIRAQKGQGIAAQMSHSSSSSGNMSVLSDSADIMFSSRLNGDLRFRSLPREGARES 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   346 IQSLEPRLGALGPAGDMNGTFLYQRGHPQADENLGHLGGASGTGTLLRPKSQELRHFESENImSPACVVSPHATYSTSII 425
Cdd:pfam15273   81 LSPLETESFLRGPAERAGTTLPKQSEESQDDQAVHELQGSPRHGLLERPRSQEPRKFADESS-SSPACVSPHAYYSTSII 159
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   426 PNATLSSSSEVIAIPTAQSAGQRESKSSGSSharikSRDHLISRHAVKGDPQSPGRHWNEGHATILSQDLDPHSPGE-PA 504
Cdd:pfam15273  160 GNATISSSSDTISIHTVSTGGVLDSRMDSTN-----DNKAASSRASGKDDHQSSSGNWSGSSSTCPSQTSETIPPASsPP 234
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   505 LLSLCDSAVPLNAPANRENGSQAMPYNCRNNLAFPAHPQDVDGKSESSYSGGGGHSSSEPWEYKSSGNGRASPLKPHLAT 584
Cdd:pfam15273  235 LSSHCDSELSLNTPPHEENDSSGFYYRCHRAASFSSHSQDVDDDSESSYSEGRPASSEEEWEYSAEGNETASPKKPRTAT 314
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   585 PGYSTPTSNMSSCSLDQTSNKEDAGSLYSEDHDGYCASVHTDSGHGSGNLCNSSDGFGNPRHSVINVFVGRAQKNQGDRS 664
Cdd:pfam15273  315 PGLSTPSSNSSSTSEKTPSEKADTSSLYSVDHDGYYTSMHFDSGLKSGKSYNNYAGFGPDRGSSNNVFDGEAQKNQDDSS 394
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   665 NYQDKSLSRNISLKKAKKPPLPPSRTDSLRRIPKKSSQCNGQVLNESLIATLQHSLQLSLPGKSGSSPSQSPCSDLEEPW 744
Cdd:pfam15273  395 GHSDKSLRRSISLKKAKKPPPPPKRTSSLRRPPKKEPKINGQVLLELLIASLQMSLQLNLCGKGGSSESSSLCSDYEEPW 474
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   745 LPRSRSQSTVSAGSSMTSATTPNVYSLCGATPSQSDTSSVKSEYTDPWGYYIDYTGMQEDPGNPAGGCSTSSGVPTGNGP 824
Cdd:pfam15273  475 LRRSRSQSTVSSSSSMSSTTDPNYYSLCVVTPSQSDTSSVKSEYADLWLYYIDLKGASDDPYRSLSNSSTATGTTVIECI 554
                          570       580       590       600       610       620       630
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767943205   825 VRHVQEGSRATMPQVPGGSVKPKIMSPEKSHRVISPSSGYSSQSNTPTALTPVPVFLKSVSPANGKGKPKPKVPERK 901
Cdd:pfam15273  555 KSPESSGSRATTPSVPGVEVKPKLSSPEKLARVTSPSSGYSSQSNTPTSLTPVPFFLGPLSPANGKRKKKPKVPERK 631
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
1124-1525 4.02e-08

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 58.64  E-value: 4.02e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1124 PSAFLKSRNSTNEMESESQPASVTSSLPTPAKSSSQGDHGSAAERGGPVSRSPGAPSAGEAEARPSPSTTPLPDSSPSRK 1203
Cdd:PHA03307   54 TVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPD 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1204 pppiskkpklflvVPPPQKDFAVEPAENVSEALRAVPSPTTGEEGSVHSREAkeSSAAQAGSHATHPGTSVLE------- 1276
Cdd:PHA03307  134 -------------LSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQA--ALPLSSPEETARAPSSPPAepppstp 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1277 -GGAAGSMSPSRVEANVPMVQPDVSPAPKQEEPAENSADTGGDGESCLSQQDGAAGVPETNAAGSSSEACDFLKEDGNDE 1355
Cdd:PHA03307  199 pAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGP 278
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1356 VMTPSRPRTTEdlfaaihrskrkvlGRRDSDDDHSRNHSPSPPVTPTGAAPSLASPKQVGSIQrSIRKSSTSSDNFKALL 1435
Cdd:PHA03307  279 SSRPGPASSSS--------------SPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSS-STSSSSESSRGAAVSP 343
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1436 LKKGSRSDTSARMSAAemlknTDPRFQRSRSEPSPDAPESPSSCSPSKNRRAQeeWAKNEGLMPRSLSFSGPRyGRSRTP 1515
Cdd:PHA03307  344 GPSPSRSPSPSRPPPP-----ADPSSPRKRPRPSRAPSSPAASAGRPTRRRAR--AAVAGRARRRDATGRFPA-GRPRPS 415
                         410
                  ....*....|
gi 767943205 1516 PSAASSRYSM 1525
Cdd:PHA03307  416 PLDAGAASGA 425
 
Name Accession Description Interval E-value
NHS pfam15273
NHS-like; This family of proteins includes Nance-Horan syndrome protein (NHS).
266-901 0e+00

NHS-like; This family of proteins includes Nance-Horan syndrome protein (NHS).


Pssm-ID: 464606  Cd Length: 654  Bit Score: 758.18  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   266 GQRSETRDSSCQTEDVKVVPPSMRRIRAQKGQGIAAQMGHFSGSSGNMSVLSDSAGIVFPSRLDSDAGFHSLPRSGARAN 345
Cdd:pfam15273    1 GRRSETRDSSCQTEDVKVVPPSRRRIRAQKGQGIAAQMSHSSSSSGNMSVLSDSADIMFSSRLNGDLRFRSLPREGARES 80
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   346 IQSLEPRLGALGPAGDMNGTFLYQRGHPQADENLGHLGGASGTGTLLRPKSQELRHFESENImSPACVVSPHATYSTSII 425
Cdd:pfam15273   81 LSPLETESFLRGPAERAGTTLPKQSEESQDDQAVHELQGSPRHGLLERPRSQEPRKFADESS-SSPACVSPHAYYSTSII 159
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   426 PNATLSSSSEVIAIPTAQSAGQRESKSSGSSharikSRDHLISRHAVKGDPQSPGRHWNEGHATILSQDLDPHSPGE-PA 504
Cdd:pfam15273  160 GNATISSSSDTISIHTVSTGGVLDSRMDSTN-----DNKAASSRASGKDDHQSSSGNWSGSSSTCPSQTSETIPPASsPP 234
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   505 LLSLCDSAVPLNAPANRENGSQAMPYNCRNNLAFPAHPQDVDGKSESSYSGGGGHSSSEPWEYKSSGNGRASPLKPHLAT 584
Cdd:pfam15273  235 LSSHCDSELSLNTPPHEENDSSGFYYRCHRAASFSSHSQDVDDDSESSYSEGRPASSEEEWEYSAEGNETASPKKPRTAT 314
                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   585 PGYSTPTSNMSSCSLDQTSNKEDAGSLYSEDHDGYCASVHTDSGHGSGNLCNSSDGFGNPRHSVINVFVGRAQKNQGDRS 664
Cdd:pfam15273  315 PGLSTPSSNSSSTSEKTPSEKADTSSLYSVDHDGYYTSMHFDSGLKSGKSYNNYAGFGPDRGSSNNVFDGEAQKNQDDSS 394
                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   665 NYQDKSLSRNISLKKAKKPPLPPSRTDSLRRIPKKSSQCNGQVLNESLIATLQHSLQLSLPGKSGSSPSQSPCSDLEEPW 744
Cdd:pfam15273  395 GHSDKSLRRSISLKKAKKPPPPPKRTSSLRRPPKKEPKINGQVLLELLIASLQMSLQLNLCGKGGSSESSSLCSDYEEPW 474
                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205   745 LPRSRSQSTVSAGSSMTSATTPNVYSLCGATPSQSDTSSVKSEYTDPWGYYIDYTGMQEDPGNPAGGCSTSSGVPTGNGP 824
Cdd:pfam15273  475 LRRSRSQSTVSSSSSMSSTTDPNYYSLCVVTPSQSDTSSVKSEYADLWLYYIDLKGASDDPYRSLSNSSTATGTTVIECI 554
                          570       580       590       600       610       620       630
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 767943205   825 VRHVQEGSRATMPQVPGGSVKPKIMSPEKSHRVISPSSGYSSQSNTPTALTPVPVFLKSVSPANGKGKPKPKVPERK 901
Cdd:pfam15273  555 KSPESSGSRATTPSVPGVEVKPKLSSPEKLARVTSPSSGYSSQSNTPTSLTPVPFFLGPLSPANGKRKKKPKVPERK 631
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
1124-1525 4.02e-08

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 58.64  E-value: 4.02e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1124 PSAFLKSRNSTNEMESESQPASVTSSLPTPAKSSSQGDHGSAAERGGPVSRSPGAPSAGEAEARPSPSTTPLPDSSPSRK 1203
Cdd:PHA03307   54 TVVAGAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGSPTPPGPSSPDPPPPTPPPASPPPSPAPD 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1204 pppiskkpklflvVPPPQKDFAVEPAENVSEALRAVPSPTTGEEGSVHSREAkeSSAAQAGSHATHPGTSVLE------- 1276
Cdd:PHA03307  134 -------------LSEMLRPVGSPGPPPAASPPAAGASPAAVASDAASSRQA--ALPLSSPEETARAPSSPPAepppstp 198
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1277 -GGAAGSMSPSRVEANVPMVQPDVSPAPKQEEPAENSADTGGDGESCLSQQDGAAGVPETNAAGSSSEACDFLKEDGNDE 1355
Cdd:PHA03307  199 pAAASPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENECPLPRPAPITLPTRIWEASGWNGP 278
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1356 VMTPSRPRTTEdlfaaihrskrkvlGRRDSDDDHSRNHSPSPPVTPTGAAPSLASPKQVGSIQrSIRKSSTSSDNFKALL 1435
Cdd:PHA03307  279 SSRPGPASSSS--------------SPRERSPSPSPSSPGSGPAPSSPRASSSSSSSRESSSS-STSSSSESSRGAAVSP 343
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1436 LKKGSRSDTSARMSAAemlknTDPRFQRSRSEPSPDAPESPSSCSPSKNRRAQeeWAKNEGLMPRSLSFSGPRyGRSRTP 1515
Cdd:PHA03307  344 GPSPSRSPSPSRPPPP-----ADPSSPRKRPRPSRAPSSPAASAGRPTRRRAR--AAVAGRARRRDATGRFPA-GRPRPS 415
                         410
                  ....*....|
gi 767943205 1516 PSAASSRYSM 1525
Cdd:PHA03307  416 PLDAGAASGA 425
PHA03247 PHA03247
large tegument protein UL36; Provisional
998-1497 2.96e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 49.17  E-value: 2.96e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205  998 PDWCLSPPRPALSPILPDSPVSLPLPPPLLPSSEPPPAPPLDPKFMKDTR----PPFTNSGQPESSRGSLRPPSTKE-ET 1072
Cdd:PHA03247 2564 PDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPpsplPPDTHAPDPPPPSPSPAANEPDPhPP 2643
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1073 SRPPMPLITTEALQMVQLRPVRKNSGAEAAQLSERTAQEQRTPVAPQYHLKPSAFlkSRNSTNEMESESQPASVTSSLPT 1152
Cdd:PHA03247 2644 PTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSL--ADPPPPPPTPEPAPHALVSATPL 2721
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1153 PAKSSSQGDHGSAAERGGPVSRSPGAPSAGEAEARP-SPSTTPLPDSS-PSRKPppiskkpklflvVPPPQKDFAVEPAE 1230
Cdd:PHA03247 2722 PPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPaRPPTTAGPPAPaPPAAP------------AAGPPRRLTRPAVA 2789
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1231 NVSEALRAVPSPttgeegsvhsREAKESSAAQAGSHATHPGTSVLEGGAAGSMSPsrveanVPMVQPDVSPAPKQEEPAE 1310
Cdd:PHA03247 2790 SLSESRESLPSP----------WDPADPPAAVLAPAAALPPAASPAGPLPPPTSA------QPTAPPPPPGPPPPSLPLG 2853
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1311 NSADTGGDgesclSQQDGAAGVPETNAAgssseacdflkedgndevmTPSRPRTTEDLFAAIHRSKRKVlgrRDSDDDHS 1390
Cdd:PHA03247 2854 GSVAPGGD-----VRRRPPSRSPAAKPA-------------------APARPPVRRLARPAVSRSTESF---ALPPDQPE 2906
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 767943205 1391 RNHSPSPPVTPTGAAPSLASPKQVGSIQRSIRKSSTSSDNFKALLLKKGSRSDTSARMSAAEMLKNTDPRFQRSRSEPSP 1470
Cdd:PHA03247 2907 RPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSR 2986
                         490       500
                  ....*....|....*....|....*..
gi 767943205 1471 DAPESPSSCSPSKNRRAQEEWAKNEGL 1497
Cdd:PHA03247 2987 EAPASSTPPLTGHSLSRVSSWASSLAL 3013
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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