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Conserved domains on  [gi|767981571|ref|XP_011535481|]
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basal body-orientation factor 1 isoform X12 [Homo sapiens]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4515 super family cl25922
Domain of unknown function (DUF4515); This family of proteins is found in bacteria and ...
 1-60 2.43e-12

Domain of unknown function (DUF4515); This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 198 and 469 amino acids in length. There are two completely conserved L residues that may be functionally important.


The actual alignment was detected with superfamily member pfam14988:

Pssm-ID: 405647 [Multi-domain]  Cd Length: 206  Bit Score: 65.56  E-value: 2.43e-12
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767981571    1 MLAERAHHE-----------AIVQLNDAGRNVFKENDYLQKALAYHLKETDALQKNSQKLQESHTLLLHQK 60
Cdd:pfam14988 130 ELGERATRElkrkaqalklaAKQALSEFCRSIKRENRQLQKELLQLIQETQALEAIKSKLENRKQRLKEEQ 200
 
Name Accession Description Interval E-value
DUF4515 pfam14988
Domain of unknown function (DUF4515); This family of proteins is found in bacteria and ...
 1-60 2.43e-12

Domain of unknown function (DUF4515); This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 198 and 469 amino acids in length. There are two completely conserved L residues that may be functionally important.


Pssm-ID: 405647 [Multi-domain]  Cd Length: 206  Bit Score: 65.56  E-value: 2.43e-12
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767981571    1 MLAERAHHE-----------AIVQLNDAGRNVFKENDYLQKALAYHLKETDALQKNSQKLQESHTLLLHQK 60
Cdd:pfam14988 130 ELGERATRElkrkaqalklaAKQALSEFCRSIKRENRQLQKELLQLIQETQALEAIKSKLENRKQRLKEEQ 200
 
Name Accession Description Interval E-value
DUF4515 pfam14988
Domain of unknown function (DUF4515); This family of proteins is found in bacteria and ...
 1-60 2.43e-12

Domain of unknown function (DUF4515); This family of proteins is found in bacteria and eukaryotes. Proteins in this family are typically between 198 and 469 amino acids in length. There are two completely conserved L residues that may be functionally important.


Pssm-ID: 405647 [Multi-domain]  Cd Length: 206  Bit Score: 65.56  E-value: 2.43e-12
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 767981571    1 MLAERAHHE-----------AIVQLNDAGRNVFKENDYLQKALAYHLKETDALQKNSQKLQESHTLLLHQK 60
Cdd:pfam14988 130 ELGERATRElkrkaqalklaAKQALSEFCRSIKRENRQLQKELLQLIQETQALEAIKSKLENRKQRLKEEQ 200
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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