|
Name |
Accession |
Description |
Interval |
E-value |
| GOLGA2L5 |
pfam15070 |
Putative golgin subfamily A member 2-like protein 5; The function of the GOLGA2L5 protein ... |
348-903 |
0e+00 |
|
Putative golgin subfamily A member 2-like protein 5; The function of the GOLGA2L5 protein family remains unknown. This family of proteins is thought to be found in the Golgi apparatus of eukaryotes.
Pssm-ID: 464485 [Multi-domain] Cd Length: 521 Bit Score: 694.12 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 348 QLLESIGHLQKERDRYAEQIQVEGRVWKDKTEQLLTQVALVAEERDQNISRVQELEAAITELKSAAALLSQEREAQnkae 427
Cdd:pfam15070 1 QLMESLKQLQTERDQYAENLKEEGAVWQQKMQQLSEQVRTLREEKERSVSQVQELETSLAELKNQAAVPPAEEEQP---- 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 428 pqSSEPSERELALEEVLNTLQQDKDAVTAQFQAQLRDNEQLSRLCAEQETRLGELERRVENQVQEEEDRRRMLEDVQSDK 507
Cdd:pfam15070 77 --PAGPSEEEQRLQEEAEQLQKELEALAGQLQAQVQDNEQLSRLNQEQEQRLLELERAAERWGEQAEDRKQILEDMQSDR 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 508 ATISRALTQNRTLKDQLAELQNGFVKVTNENMELTNAIQSELHVKKELARRMGELQEELHNIKEQLEVKSQESQGLLAQR 587
Cdd:pfam15070 155 ATISRALSQNRELKEQLAELQNGFVKLTNENMELTSALQSEQHVKKELAKKLGQLQEELGELKETLELKSQEAQSLQEQR 234
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 588 EQLVAHLQQYSAGYQALASEREQLHHQYLQQVQLMDRLHHDESQGRVELEISHSQLNQAQEQLELLVRDNEQLKSEVREL 667
Cdd:pfam15070 235 DQYLAHLQQYVAAYQQLASEKEELHKQYLLQTQLMDRLQHEEVQGKVAAEMARQELQETQERLEALTQQNQQLQAQLSLL 314
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 668 LNSSAlasssldhGEGRESPQ-QEDSISASIIIPEDFENQKEMEQFIRGALAQVEAERDEARRQLEEEHRLHLAARYQAA 746
Cdd:pfam15070 315 ANPGE--------GDGLESEEeEEEAPRPSLSIPEDFESREAMVAFFNSALAQAEEERAELRRQLKEQKRRCRRLAQQAA 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 747 vALRLEQQHQSHKadhdqhdhahahdqhahcdhdHDHSEGGVPVEVHQALQVAMEKLQHRFTSLMQEKADLKERVEELEH 826
Cdd:pfam15070 387 -PAQEEPEHEAHA---------------------PGTGGDSVPVEVHQALQVAMEKLQSRFTELMQEKADLKERVEELEH 444
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1698335943 827 RCIQLSGETDTIGEYIALYQSQRAIMKQKHHEKEQYINMLAQDKEEMKMKLAELQDLVMRLVAERNDWYSRYTGAVA 903
Cdd:pfam15070 445 RCIQLSGETDTIGEYIALYQSQRAILKQRHREKEEYISRLAQDKEEMKVKLLELQELVLRLVGERNEWYGKYLAAAQ 521
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
201-825 |
3.07e-18 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 90.38 E-value: 3.07e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 201 QTALQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRLELFRLNNVSEETKQQ 280
Cdd:COG1196 210 EKAERYRELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 281 NSELSEQIklsneekgamkfevEDLRKRLELADLMLQQcssqsdptsATQQAQLLLEEKQQLEMHNHQLLESIGHLQKER 360
Cdd:COG1196 290 EYELLAEL--------------ARLEQDIARLEERRRE---------LEERLEELEEELAELEEELEELEEELEELEEEL 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 361 DRYAEQIQVEGRVWKDKTEQLLTQVALVAEERDQNISRVQELEAAITELKSAAALLSQEREAQNKAEpqssepsERELAL 440
Cdd:COG1196 347 EEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALL-------ERLERL 419
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 441 EEVLNTLQQDKDAVTAQFQAQLRDNEQLSRLCAEQETRLGELERRVENQVQEEEDRRRMLEDVQsdkatisRALTQNRTL 520
Cdd:COG1196 420 EEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELL-------EELAEAAAR 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 521 KDQLAELQngfvkvtnENMELTNAIQSELHVKKELARRMGELQEELHNIKEQLEVKSQESQGLLAQR--------EQLVA 592
Cdd:COG1196 493 LLLLLEAE--------ADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIvveddevaAAAIE 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 593 HLQQYSAGYQALASEREQLHHQYLQQVQLMDRLHHDESQGRVELEISHSQLNQAQEQLELLVRDNEQLKSEVRELLNSSA 672
Cdd:COG1196 565 YLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAG 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 673 LASSSLDHGEGRESPQQEDSISASIIIPEDFENQKEMEQFIRGALAQVEAERDEARRQLEEEHRLHLAARYQAAVALRLE 752
Cdd:COG1196 645 RLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEE 724
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 753 QQHQSHKADHDQHDHAHAHDQHAHCDHDHDHSEGGVPVEVHQA----LQVAMEKL--------------QHRFTSLMQEK 814
Cdd:COG1196 725 ALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERelerLEREIEALgpvnllaieeyeelEERYDFLSEQR 804
|
650
....*....|.
gi 1698335943 815 ADLKERVEELE 825
Cdd:COG1196 805 EDLEEARETLE 815
|
|
| GM130_C |
pfam19046 |
GM130 C-terminal binding motif; This entry represents the C-terminal motif from the GM130 ... |
973-1021 |
5.19e-18 |
|
GM130 C-terminal binding motif; This entry represents the C-terminal motif from the GM130 protein that is bound by the GRASP65 PDZ domain pfam04495.
Pssm-ID: 465957 Cd Length: 46 Bit Score: 78.19 E-value: 5.19e-18
10 20 30 40
....*....|....*....|....*....|....*....|....*....
gi 1698335943 973 PKEGGTAQQIMQLLHEIQNPQgtarSPPFLGENPCIPFFYRPDEQDEVK 1021
Cdd:pfam19046 2 PPENPTAQQIMQLLPEIQNPQ----EHPGLGSNPCIPFFYRADENDEVK 46
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
119-882 |
1.95e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 88.19 E-value: 1.95e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 119 ERELETRNQELAAALDSSNLTNSQLNTKLDQLTQQTRGLTEQLQKERKEFEDKHSKehgamreqlqvhiqtIGILVSEKS 198
Cdd:TIGR02168 213 ERYKELKAELRELELALLVLRLEELREELEELQEELKEAEEELEELTAELQELEEK---------------LEELRLEVS 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 199 ELQTALQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRLELFRLNNVSEETK 278
Cdd:TIGR02168 278 ELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLE 357
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 279 QQNSELSEQIKLSNEEKGAMKFEVEDLRKrlELADLMLQQcssqsdpTSATQQAQLLLEEKQQLEMHNHQLLESIGHLQK 358
Cdd:TIGR02168 358 AELEELEAELEELESRLEELEEQLETLRS--KVAQLELQI-------ASLNNEIERLEARLERLEDRRERLQQEIEELLK 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 359 ERDRyaeqiqvegrvwkdktEQLLTQVALVAEERDQNISRVQELEAAITELKSAAALLSQEREAQNKAEPQSSEPSEREL 438
Cdd:TIGR02168 429 KLEE----------------AELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLD 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 439 ALEEVLNTLQQDKDAVTAQFQAQLRDNEQLSRLC----------AEQETRLGEL------------ERRVENQVQEEEDR 496
Cdd:TIGR02168 493 SLERLQENLEGFSEGVKALLKNQSGLSGILGVLSelisvdegyeAAIEAALGGRlqavvvenlnaaKKAIAFLKQNELGR 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 497 RRMLEDVQSDKATISRALTQNRTLKDQLAELQNGFVKVTNENMELTNAIQSELHVKKELA---RRMGELQEELHNIKEQL 573
Cdd:TIGR02168 573 VTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDnalELAKKLRPGYRIVTLDG 652
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 574 EV----------KSQESQGLLAQR-------EQLVAHLQQYSAGYQALASEREQLhHQYLQQVQLMDRLHHDESQGRVEL 636
Cdd:TIGR02168 653 DLvrpggvitggSAKTNSSILERRreieeleEKIEELEEKIAELEKALAELRKEL-EELEEELEQLRKELEELSRQISAL 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 637 EISHSQLNQAQEQLELLVRDNEQLKSEVREllnssalasssldhgegRESPQQEDSISASIIIPEDFENQKEMEQFIRGA 716
Cdd:TIGR02168 732 RKDLARLEAEVEQLEERIAQLSKELTELEA-----------------EIEELEERLEEAEEELAEAEAEIEELEAQIEQL 794
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 717 LAQVEAERDEARRQLEEEHRLHLAARYQAAVALRLEQQHQSHKADHDQHDHAHAHDQHAHCDHDHDHSEggvpvevhqaL 796
Cdd:TIGR02168 795 KEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEE----------L 864
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 797 QVAMEKLQHRFTSLMQEKADLKERVEELEHRCIQLSGETDTIGEyialyqsQRAIMKQKHHEKEQYINMLAQDKEEMKMK 876
Cdd:TIGR02168 865 EELIEELESELEALLNERASLEEALALLRSELEELSEELRELES-------KRSELRRELEELREKLAQLELRLEGLEVR 937
|
....*.
gi 1698335943 877 LAELQD 882
Cdd:TIGR02168 938 IDNLQE 943
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
180-733 |
1.15e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 85.37 E-value: 1.15e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 180 REQLQVHIQTIGILVSEKSELQTALQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKE 259
Cdd:COG1196 238 EAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEER 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 260 RDSLRLELFRLNNVSEETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKRLELADLMLQQCSSQSDptSATQQAQLLLEEK 339
Cdd:COG1196 318 LEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELE--ELAEELLEALRAA 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 340 QQLEMHNHQLLESIGHLQKERDRYAEQIQVEGRVWKDKTEQLLTQVALVAEERDQNISRVQELEAAITELKSAAALLSQE 419
Cdd:COG1196 396 AELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALL 475
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 420 REAQNKAEPQSSEPSERELALEEVLNTLQQDKDAVTAQFQAQLR-------DNEQLSRLCAEQETRLGELERRVENQVQE 492
Cdd:COG1196 476 EAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLrglagavAVLIGVEAAYEAALEAALAAALQNIVVED 555
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 493 EEDRRRMLEDVQSDKATISRALTQNRTLKDQLAELQNgfvkVTNENMELTNAIQSELHVKKELARRMGELQEELHNIKEQ 572
Cdd:COG1196 556 DEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAAL----ARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAAR 631
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 573 LEVKSQESQGLLAQREQLVAHLQQYSAGYQALASEREQLHHQYLQQVQLMDRLhhDESQGRVELEISHSQLNQAQEQLEL 652
Cdd:COG1196 632 LEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEEL--AERLAEEELELEEALLAEEEEEREL 709
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 653 LVRDNEQLKSEVRELLNSSALASSSLDHGEGRESPQQEDSISASIIIPEDFEnqkemeqfirgaLAQVEAERDEARRQLE 732
Cdd:COG1196 710 AEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPD------------LEELERELERLEREIE 777
|
.
gi 1698335943 733 E 733
Cdd:COG1196 778 A 778
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
146-666 |
6.95e-13 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 72.83 E-value: 6.95e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 146 KLDQLTQQTRGLTEQLqKERKEFEDKHSKEHGAMREQLQVHIQTIGILvseKSELQTALQYTQQAARQKSAEAEELNNRL 225
Cdd:pfam05483 269 KANQLEEKTKLQDENL-KELIEKKDHLTKELEDIKMSLQRSMSTQKAL---EEDLQIATKTICQLTEEKEAQMEELNKAK 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 226 QSSKQRVSELERTlssVSTQQKQFEKHNKELEKERDSLRLelfrlnnVSEETKQQNSELSEQIKLSNEEkgamKFEVEDL 305
Cdd:pfam05483 345 AAHSFVVTEFEAT---TCSLEELLRTEQQRLEKNEDQLKI-------ITMELQKKSSELEEMTKFKNNK----EVELEEL 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 306 RKRLELADLML---QQCSSQSDPTSATQQAQLLLEEKQQLEMHNHQL-LESIGHLQKERDRYAEQIQVEGRVWKDKTEQL 381
Cdd:pfam05483 411 KKILAEDEKLLdekKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIqLTAIKTSEEHYLKEVEDLKTELEKEKLKNIEL 490
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 382 LTQVALVAEErdqNISRVQELEAAITELKSAAALLSQEREAQNKAEPQSSEPSEREL----ALEEVLNTLQQDKDAVTAQ 457
Cdd:pfam05483 491 TAHCDKLLLE---NKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMnlrdELESVREEFIQKGDEVKCK 567
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 458 FQAQLRDNEQLSRLCAEQETRLGELERRVENQVQEEEDRRRMLEDV-QSDKATISRALTQNRTL---KDQLAELQNGFVK 533
Cdd:pfam05483 568 LDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELhQENKALKKKGSAENKQLnayEIKVNKLELELAS 647
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 534 VTNENMELTNAIQSELHVKK-ELARRMGELQEELHNIKEQLEVKSQESQGLLAQREQLVAHLQQYSAGYQALASEREqlh 612
Cdd:pfam05483 648 AKQKFEEIIDNYQKEIEDKKiSEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERD--- 724
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 1698335943 613 hqylQQVQLMDRLHHDESQGRVELEISHS----QLNQAQEQLELLVRDNEQLKSEVRE 666
Cdd:pfam05483 725 ----SELGLYKNKEQEQSSAKAALEIELSnikaELLSLKKQLEIEKEEKEKLKMEAKE 778
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
118-609 |
5.00e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 70.35 E-value: 5.00e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 118 NERELETRNQELAaaldssnltnsQLNTKLDQLTQQTRGLTEQLQKERKEFEDkhskehgamreqlqvhiqtigiLVSEK 197
Cdd:COG1196 314 LEERLEELEEELA-----------ELEEELEELEEELEELEEELEEAEEELEE----------------------AEAEL 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 198 SELQTALQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRLELFRLNNVSEET 277
Cdd:COG1196 361 AEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEE 440
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 278 KQQNSELSEQIKLSNEEKGAMKFEVEDLRKRLELADLMLQQCSSQSdptsatQQAQLLLEEKQQLEMHNHQLLESIGHLQ 357
Cdd:COG1196 441 EEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEEL------AEAAARLLLLLEAEADYEGFLEGVKAAL 514
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 358 KERDRYAEQIQVEGRVWKDKTEQLLTQVALVAEERDQNISRVQELEAAITELKsAAALLSQEREAQNKAEPQSSEPSERE 437
Cdd:COG1196 515 LLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLK-AAKAGRATFLPLDKIRARAALAAALA 593
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 438 LALEEVLNTLQQDKDAVTAQFQAQLRDNEQLSRLCAEQETRLGELERRVENQVQEEEDRRRMLEDVQSDKATISRALTQN 517
Cdd:COG1196 594 RGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAA 673
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 518 RTLKDQLAELQngfvkvtnENMELTNAIQSELHVKKELARRMGELQEELHNIKEQLEVKSQESQGLLAQREQLVAHLQQY 597
Cdd:COG1196 674 LLEAEAELEEL--------AERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEE 745
|
490
....*....|..
gi 1698335943 598 SAGYQALASERE 609
Cdd:COG1196 746 ELLEEEALEELP 757
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
376-892 |
6.35e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.97 E-value: 6.35e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 376 DKTEQLLTQVALVAEERDQNIS----------RVQELEAAITELKSAAALLsQEREAQNKAEPQSSEPSERELALEEVLN 445
Cdd:COG1196 182 EATEENLERLEDILGELERQLEplerqaekaeRYRELKEELKELEAELLLL-KLRELEAELEELEAELEELEAELEELEA 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 446 TLQQDKDAVTAQFQAQLRDNEQLSRLCAEQETRLGELERRVENQVQEEEDRRRMLEDVQSDKATISRALTQNRTLKDQLA 525
Cdd:COG1196 261 ELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELE 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 526 ELQNGFVKVTNENMELTNAIQSELHVKKELARRMGELQEELHNIKEQLEVKSQESQGLLAQREQLVAHLQQYSAGYQALA 605
Cdd:COG1196 341 ELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLE 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 606 SEREQLHHQYLQQVQLMDRLHHDESQGRVELEISHSQLNQAQEQLELLVRDNEQLKSEVRELLNSSALASSSLDHGEGRE 685
Cdd:COG1196 421 EELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAE 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 686 spQQEDSISASIIIPEDFENQKEMEQFIRGALAQVEAERDEARRQLEEehRLHLAARYQAAVALRLEQQHQSHKADHDQH 765
Cdd:COG1196 501 --ADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAA--ALQNIVVEDDEVAAAAIEYLKAAKAGRATF 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 766 DHAHAHDQHAHCDHDHDHSEGGVPVEVHQALQVAMEKLQHRFTSLMQEKADLKERVE-------ELEHRCIQLSGETDTI 838
Cdd:COG1196 577 LPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEaalrravTLAGRLREVTLEGEGG 656
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....
gi 1698335943 839 GEYIALYQSQRAIMKQKHHEKEQYINMLAQDKEEMKMKLAELQDLVMRLVAERN 892
Cdd:COG1196 657 SAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELA 710
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
88-733 |
1.18e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.77 E-value: 1.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 88 ESLRQLSQQLNGLVSGSSVAYVNGDSGSSGNERELETRNQELAAALDSSNLTNSQLNTKLDQLTQQTRGLTEQLQKERKE 167
Cdd:TIGR02168 347 EELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEEL 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 168 FEDKHSKEHGAMREQLQVHIQTIGILVSEKSELQTALQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQK 247
Cdd:TIGR02168 427 LKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSE 506
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 248 --QFEKHNKELEKERDSLRLELF----------------RLNNVseETKQQNSELSEQIKLSNEEKGAMKFEVEDLRK-- 307
Cdd:TIGR02168 507 gvKALLKNQSGLSGILGVLSELIsvdegyeaaieaalggRLQAV--VVENLNAAKKAIAFLKQNELGRVTFLPLDSIKgt 584
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 308 -----RLELADLMLQQCSSQSDPTSATQQAQLLLEEkqqleMHNHQL----LESIGHLQKERDRYAEQIQVEGRVWKdkT 378
Cdd:TIGR02168 585 eiqgnDREILKNIEGFLGVAKDLVKFDPKLRKALSY-----LLGGVLvvddLDNALELAKKLRPGYRIVTLDGDLVR--P 657
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 379 EQLLT----QVALVAEERDQNISrvqELEAAITELKSAAALLSQEREAqnkAEPQSSEPSERELALEEVLNTLQQDKDAV 454
Cdd:TIGR02168 658 GGVITggsaKTNSSILERRREIE---ELEEKIEELEEKIAELEKALAE---LRKELEELEEELEQLRKELEELSRQISAL 731
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 455 TAQFQAQLRDNEQLSRLCAEQETRLGELERRVENQVQEEEDRR----RMLEDVQSDKATISRALTQNRTLKDQLAELQNG 530
Cdd:TIGR02168 732 RKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEeelaEAEAEIEELEAQIEQLKEELKALREALDELRAE 811
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 531 FVKVTNENMELTNAIQSELHVKKELARRMGELQEELHNIKEQLE--VKSQESQGLL--AQREQLVAHLQQYSAGYQALAS 606
Cdd:TIGR02168 812 LTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIEslAAEIEELEELieELESELEALLNERASLEEALAL 891
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 607 EREQLhHQYLQQVQLMDRLHHDESQGRVELEISHSQLNQAQEQLELLVRDNEQLKSEVRELLNSSALASSSLDHGEGRES 686
Cdd:TIGR02168 892 LRSEL-EELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEA 970
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 1698335943 687 PQQEDSISASII--------IPEDFENQKEMEQFIRgalAQVEaERDEARRQLEE 733
Cdd:TIGR02168 971 RRRLKRLENKIKelgpvnlaAIEEYEELKERYDFLT---AQKE-DLTEAKETLEE 1021
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
180-516 |
1.29e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.38 E-value: 1.29e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 180 REQLQVHIQTIGILVSEKSELQTALQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKE 259
Cdd:TIGR02168 683 EEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAE 762
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 260 RDSLRLELFRLNNVSEETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKRL-----ELADLMLQQCSSQSDPTSATQQAQL 334
Cdd:TIGR02168 763 IEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELtllneEAANLRERLESLERRIAATERRLED 842
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 335 LLEEKQQLEMHNHQLLESIGHLQKERDRYAEQIQvegrVWKDKTEQLLTQVALVAEERDQNISRVQELEAAITELKsaaa 414
Cdd:TIGR02168 843 LEEQIEELSEDIESLAAEIEELEELIEELESELE----ALLNERASLEEALALLRSELEELSEELRELESKRSELR---- 914
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 415 llsQEREAQNKAEPQSsepserELALEEVLNTLQQDKDAVTAQFQAQLRDNEQLSRLC----AEQETRLGELERRVEN-- 488
Cdd:TIGR02168 915 ---RELEELREKLAQL------ELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIeddeEEARRRLKRLENKIKElg 985
|
330 340 350 360
....*....|....*....|....*....|....*....|
gi 1698335943 489 --------QVQEEEDRRRML----EDVQSDKATISRALTQ 516
Cdd:TIGR02168 986 pvnlaaieEYEELKERYDFLtaqkEDLTEAKETLEEAIEE 1025
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
180-594 |
1.80e-09 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 62.28 E-value: 1.80e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 180 REQLQVHIQTIGILVSEKSELQTALQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVST---QQKQFEKHNKEL 256
Cdd:PRK04863 278 ANERRVHLEEALELRRELYTSRRQLAAEQYRLVEMARELAELNEAESDLEQDYQAASDHLNLVQTalrQQEKIERYQADL 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 257 EKerdsLRLELFRLNNVSEETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKRLELADLMLQQcssqsdptsaTQQAQLLL 336
Cdd:PRK04863 358 EE----LEERLEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQTRAIQ----------YQQAVQAL 423
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 337 EEKQQLEMHNHQLLESIGHLQKERDRYAEQIQVEgrvwKDKTEQLLTQVALVAEERDQNISRVQELEAAITEL---KSAA 413
Cdd:PRK04863 424 ERAKQLCGLPDLTADNAEDWLEEFQAKEQEATEE----LLSLEQKLSVAQAAHSQFEQAYQLVRKIAGEVSRSeawDVAR 499
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 414 ALLSQEREAQNKAepQSSEPSERELA-LEEVLNtLQQDKDAVTAQFQ----AQLRDNEQLSRLCAEQETRLGELERRVEN 488
Cdd:PRK04863 500 ELLRRLREQRHLA--EQLQQLRMRLSeLEQRLR-QQQRAERLLAEFCkrlgKNLDDEDELEQLQEELEARLESLSESVSE 576
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 489 QVQEEEDRRRMLEDVQSDKATISRALTQNRTLKDQLAELQNGFVKVTNENMELTNAIQSELHVKKELARRMGELQEELHN 568
Cdd:PRK04863 577 ARERRMALRQQLEQLQARIQRLAARAPAWLAAQDALARLREQSGEEFEDSQDVTEYMQQLLERERELTVERDELAARKQA 656
|
410 420
....*....|....*....|....*.
gi 1698335943 569 IKEQLEVKSQESQGLLAQREQLVAHL 594
Cdd:PRK04863 657 LDEEIERLSQPGGSEDPRLNALAERF 682
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
121-756 |
1.92e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.00 E-value: 1.92e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 121 ELETRNQELAAALDSSNLTNSQLNTKLDQLTQQTRGLTEQLQKERKEFEDKhSKEHGAMREQLQVHIQTIGILVSEKSEL 200
Cdd:TIGR02168 299 RLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEEL-KEELESLEAELEELEAELEELESRLEEL 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 201 QTALQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRL-----ELFRLNNVSE 275
Cdd:TIGR02168 378 EEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELeeleeELEELQEELE 457
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 276 ETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKRLELADLMLQQCSSQSDPTSAtqqaqlLLEEKQQLEMHNHQLLESI-- 353
Cdd:TIGR02168 458 RLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKA------LLKNQSGLSGILGVLSELIsv 531
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 354 -------------GHLQ------KERDRYAEQIQVEGRVWK----------------DKTEQLLTQ--VALVAEERDQNI 396
Cdd:TIGR02168 532 degyeaaieaalgGRLQavvvenLNAAKKAIAFLKQNELGRvtflpldsikgteiqgNDREILKNIegFLGVAKDLVKFD 611
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 397 SRVQELEAAI-------TELKSAAALLSQEREAQN-----------------KAEPQSSEPSERELALEEVlntlqqdkd 452
Cdd:TIGR02168 612 PKLRKALSYLlggvlvvDDLDNALELAKKLRPGYRivtldgdlvrpggvitgGSAKTNSSILERRREIEEL--------- 682
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 453 avTAQFQAQLRDNEQLSRLCAEQETRLGELERRVENQVQEEEDRRRMLEDVQSDkatISRALTQNRTLKDQLAELQNGFV 532
Cdd:TIGR02168 683 --EEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKD---LARLEAEVEQLEERIAQLSKELT 757
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 533 KVTNENMELTNAIQSELHVKKELARRMGELQEELHNIKEQLEVKSQESQGLLAQREQLVAHLQQYSAGYQALASEREQLH 612
Cdd:TIGR02168 758 ELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATE 837
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 613 HQYLQQVQLMDRLHHDESQGRVELEISHSQLNQAQEQLELLVRDNEQLKSEVRELLNSSALASSSLDHGEGRESPQQEDS 692
Cdd:TIGR02168 838 RRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRREL 917
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1698335943 693 ISAsiiipedfenQKEMEQFIRgALAQVEAERDEARRQLEEEHRL---HLAARYQAAVALRLEQQHQ 756
Cdd:TIGR02168 918 EEL----------REKLAQLEL-RLEGLEVRIDNLQERLSEEYSLtleEAEALENKIEDDEEEARRR 973
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
120-690 |
3.53e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 61.24 E-value: 3.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 120 RELETRNQELAAALDSSNLTNSQLNTKLDQLTQQTRGLTEQLQKERKEFEDKHS------KEHGAMREQLQVHIQTIGIL 193
Cdd:TIGR02169 318 EDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAeleevdKEFAETRDELKDYREKLEKL 397
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 194 VSEKSELQTALQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRLELFRLNN- 272
Cdd:TIGR02169 398 KREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEe 477
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 273 ---VSEETKQQNSELSE---QIKLSNEEKGAMKFEVEDLRKRLE-----LADLM-----------------LQQCSSQSD 324
Cdd:TIGR02169 478 ydrVEKELSKLQRELAEaeaQARASEERVRGGRAVEEVLKASIQgvhgtVAQLGsvgeryataievaagnrLNNVVVEDD 557
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 325 PTsATQQAQLLLEEKQQL-------EMHNHQLLESIGHLQKERDRYAEQIQVEgrvwkDKTEQLLTQV---ALVAEE--- 391
Cdd:TIGR02169 558 AV-AKEAIELLKRRKAGRatflplnKMRDERRDLSILSEDGVIGFAVDLVEFD-----PKYEPAFKYVfgdTLVVEDiea 631
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 392 -RDQNIS-RVQELEAAITElKSAA---ALLSQEREAQNKAE--PQSSEPSERELALEEVLNTLQQDKDAvtaqfQAQLRD 464
Cdd:TIGR02169 632 aRRLMGKyRMVTLEGELFE-KSGAmtgGSRAPRGGILFSRSepAELQRLRERLEGLKRELSSLQSELRR-----IENRLD 705
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 465 neQLSRLCAEQETRLGELERRVENQVQEEEDRRRMLEDVQSDKATISRALTQNRTLKDQL-AELQNGFVKVTNENMELTN 543
Cdd:TIGR02169 706 --ELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELeARIEELEEDLHKLEEALND 783
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 544 AIQSELHVK-KELARRMGELQEELHNIKEQL---EVKSQESQGLLAQREQLVAHLQQYSAGYQALASEREQLHHQYLQQV 619
Cdd:TIGR02169 784 LEARLSHSRiPEIQAELSKLEEEVSRIEARLreiEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKK 863
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1698335943 620 QLMDRlhhdesqgrvELEISHSQLNQAQEQLELLVRDNEQLKSEVRELLNSSALASSSLDHGEGRESPQQE 690
Cdd:TIGR02169 864 EELEE----------ELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKA 924
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
205-880 |
1.53e-08 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 58.83 E-value: 1.53e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 205 QYTQQAARQKS------AEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRLELFRLNNVSEETK 278
Cdd:TIGR00618 177 QYTQLALMEFAkkkslhGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 279 QQNSELSEQIKlSNEEKGAMKFEVEDLRKRLELADLMLQQCSSQSDPTSATQQAQLLLEEKQQLEMHNHQLLESIGHLQK 358
Cdd:TIGR00618 257 KKQQLLKQLRA-RIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVK 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 359 ERDRYAEQIQVEG---------RVWKDKTEQLLTQVALVAEERDQNISRVQELEAAITELKSAAALLSQEREAQNKAEPQ 429
Cdd:TIGR00618 336 QQSSIEEQRRLLQtlhsqeihiRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 430 SSEpserelaleevLNTLQQDKDAVTAQFQAQLRDNEQLsRLCAEQETRLGELERRVENQVQEEEDRRRMLEdvqSDKAT 509
Cdd:TIGR00618 416 TSA-----------FRDLQGQLAHAKKQQELQQRYAELC-AAAITCTAQCEKLEKIHLQESAQSLKEREQQL---QTKEQ 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 510 ISRALTQNRTLKDQLAELQNGFVKVTNENMELTNAIQSELHVKKELARRMGELQEELHNIKEQLEVKSQESQGLLAQREQ 589
Cdd:TIGR00618 481 IHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRAS 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 590 LVAHLQQYSAGYQALASEREQLHHQYLQQVQLMDRLHHdESQGRVELEISHSQLNQAQEqLELLVRDNEQLKSEVRELLN 669
Cdd:TIGR00618 561 LKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQD-LTEKLSEAEDMLACEQHALL-RKLQPEQDLQDVRLHLQQCS 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 670 SSALASSSLDHGEGRESPQQEDSISASIIIpedfENQKEMEQFIRGALAQVEAERDEARRQLEEEHRLHLAARYQAAVAL 749
Cdd:TIGR00618 639 QELALKLTALHALQLTLTQERVREHALSIR----VLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIE 714
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 750 RL-----EQQHQSHKADHDQHDHAHAHDQHAHCDHDHDHSEGGVPVEVHQALQVAMEKLQHRFTSLMQEKADLKERVEEL 824
Cdd:TIGR00618 715 EYdrefnEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLR 794
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*.
gi 1698335943 825 EHRCIQLSGETDTIGEYIALYQSQRAIMKQKhhekeqyinmLAQDKEEMKMKLAEL 880
Cdd:TIGR00618 795 EEDTHLLKTLEAEIGQEIPSDEDILNLQCET----------LVQEEEQFLSRLEEK 840
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
119-574 |
1.79e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 58.54 E-value: 1.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 119 ERELEtRNQELAAALDSSNLTNSQLNTKLDQLTQQTRGLTEQLQKERKEFED--KHSKEHGAMREQLQVHIQTIGILVSE 196
Cdd:PRK03918 227 EKEVK-ELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEEleEKVKELKELKEKAEEYIKLSEFYEEY 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 197 KSELQ----TALQYTQQAA--RQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKhNKELEKERDSLR-----L 265
Cdd:PRK03918 306 LDELReiekRLSRLEEEINgiEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEE-AKAKKEELERLKkrltgL 384
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 266 ELFRLNNVSEETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKRLELADLMLQQCSSQSDPTSATQQAQLLLEEKQQLEMH 345
Cdd:PRK03918 385 TPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEYTAELKRI 464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 346 NHQLLESIghlQKERDRYAEQIQVEGRVWKDKTEQLLTQVALVAEERDQNISR--VQELEAAITELKsaaalLSQEREAQ 423
Cdd:PRK03918 465 EKELKEIE---EKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKynLEELEKKAEEYE-----KLKEKLIK 536
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 424 NKAEPQSSEPS-ERELALEEVLNTLQQDKDAVTAQFQAQLRDNEQLSRLCAEQ-ETRLGELE---------RRVENQVQE 492
Cdd:PRK03918 537 LKGEIKSLKKElEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEElEERLKELEpfyneylelKDAEKELER 616
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 493 EEDRRRMLEDVQSDK-ATISRALTQNRTLKDQLAELQNGFV-----KVTNENMELTNAIQSELHVKKELARRMGELQEEL 566
Cdd:PRK03918 617 EEKELKKLEEELDKAfEELAETEKRLEELRKELEELEKKYSeeeyeELREEYLELSRELAGLRAELEELEKRREEIKKTL 696
|
....*...
gi 1698335943 567 HNIKEQLE 574
Cdd:PRK03918 697 EKLKEELE 704
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
157-619 |
1.08e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 55.93 E-value: 1.08e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 157 LTEQLQKERKEFEDKHSKEHGAMREQLQVHIQTIGILVSEKSELQTALQytqqaarqksaEAEELNNRLQSSKQRVSELE 236
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQE-----------ELEELEEELEELEAELEELR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 237 RTLSSVStQQKQFEKHNKELEKERDSLRLELFRLNNVsEETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKRLELADLM- 315
Cdd:COG4717 116 EELEKLE-KLLQLLPLYQELEALEAELAELPERLEEL-EERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEe 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 316 LQQCSSQSDptSATQQAQLLLEEKQQLEMHNHQLLESIGHLQKERDRYAEQIQVEGRVWKDKTEQLLTQVALVAEERDQN 395
Cdd:COG4717 194 LQDLAEELE--ELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSL 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 396 ISRVQELEAAITELKSAAALLSQEREAQNKAEPQSSEPSER-----ELALEEVLNTLQQDKDAVTAQFQAQLRDNEQLSR 470
Cdd:COG4717 272 ILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPAleeleEEELEELLAALGLPPDLSPEELLELLDRIEELQE 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 471 LCAEQETRLGELERRV----------ENQVQEEEDRRRMLEDVQSDKATISRALTQNRTLKDQLAELQNGFVKVTNEnmE 540
Cdd:COG4717 352 LLREAEELEEELQLEEleqeiaallaEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEE--E 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 541 LTNAIQSELHVKKELARRMGELQEELHNIKEQLEV--KSQESQGLLAQREQLVAHLQQ-------YSAGYQALASEREQL 611
Cdd:COG4717 430 LEEELEELEEELEELEEELEELREELAELEAELEQleEDGELAELLQELEELKAELRElaeewaaLKLALELLEEAREEY 509
|
....*...
gi 1698335943 612 HHQYLQQV 619
Cdd:COG4717 510 REERLPPV 517
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
119-579 |
1.39e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 55.89 E-value: 1.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 119 ERELETRNQELAAALDSSNLTNSQLNTKLDQLTQQTRGLTEQLQkerKEFEDKHSKEhgamrEQLQVHIQTIGILVSEKS 198
Cdd:pfam15921 337 KRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQ---KLLADLHKRE-----KELSLEKEQNKRLWDRDT 408
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 199 ELQTALQYTQQAARQKSAEAEELNNRLQSSKQRVS-ELERTLSSVSTQQKQFEKHNK---ELEKERDSLRL---ELFRLN 271
Cdd:pfam15921 409 GNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQgQMERQMAAIQGKNESLEKVSSltaQLESTKEMLRKvveELTAKK 488
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 272 NVSEETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKRLELADLMLQQCSSQSDPTSATQQA----QLLLEEKQQLEMHNH 347
Cdd:pfam15921 489 MTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTEcealKLQMAEKDKVIEILR 568
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 348 QLLESIGHLQKERDRYAEQIQVEGRVWKDKTEQLLTQVALVAEERDQNISRVQELEAAITELKSAAALLSQEREAQNKAE 427
Cdd:pfam15921 569 QQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAV 648
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 428 PQSSEpsERELALEEVlNTLQQDKDAVTAQFQAQLRDNEQLSRlcaEQETRLGELERRVENQVQEEEDRRRMLEDVQ-SD 506
Cdd:pfam15921 649 KDIKQ--ERDQLLNEV-KTSRNELNSLSEDYEVLKRNFRNKSE---EMETTTNKLKMQLKSAQSELEQTRNTLKSMEgSD 722
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1698335943 507 KATISRALTQNRTLKDQLAELQNGFVKVTNENMELTNAIQSELHVKKE---LARRMGELQEELHNIKEQLEV-KSQE 579
Cdd:pfam15921 723 GHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEknkLSQELSTVATEKNKMAGELEVlRSQE 799
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
174-613 |
4.02e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 54.28 E-value: 4.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 174 KEHGAMREQLQVHIQTIGILVSEKSELQTALQYTqqaarqkSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHN 253
Cdd:PRK02224 272 REREELAEEVRDLRERLEELEEERDDLLAEAGLD-------DADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEA 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 254 KELEKERDSLRLELFRLNNVSEETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKRLELADLMLQQCSSQSDptsatqqaq 333
Cdd:PRK02224 345 ESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLE--------- 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 334 LLLEEKQQLemhNHQLLESIGHLQKERDRYAEQIQ-------------VEGRVWKDKTEQLLTQVALVAEERDQNISRVQ 400
Cdd:PRK02224 416 ELREERDEL---REREAELEATLRTARERVEEAEAlleagkcpecgqpVEGSPHVETIEEDRERVEELEAELEDLEEEVE 492
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 401 ELEAAITELKSAAALLSQEREAQNKAEPQSSEPSERELALEE---VLNTLQQDKDAVTAQFQAQlRDNEQLSRLCAEQE- 476
Cdd:PRK02224 493 EVEERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEkreRAEELRERAAELEAEAEEK-REAAAEAEEEAEEAr 571
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 477 TRLGELERRVEnQVQEEEDRRRMLEDVQSDKATISRALTQNRTLKDQLAELQNGFVKVTNENMELTNAIQSELHvkkelA 556
Cdd:PRK02224 572 EEVAELNSKLA-ELKERIESLERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFD-----E 645
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1698335943 557 RRMGELQEELHNIKEQLEVKSQESQGLLAQREQLVAHLQQYSAGYQALASEREQLHH 613
Cdd:PRK02224 646 ARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEELRERREA 702
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
212-666 |
6.20e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 53.53 E-value: 6.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 212 RQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRLELFRLNNVSEETKQQNSELSEQIKLS 291
Cdd:PRK03918 220 REELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLS 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 292 ------NEEKGAMKFEVEDLRKRLELADLMLQQCSSQSdptsatqqaqlllEEKQQLEMHNHQLLESIGHLQKERDRYAE 365
Cdd:PRK03918 300 efyeeyLDELREIEKRLSRLEEEINGIEERIKELEEKE-------------ERLEELKKKLKELEKRLEELEERHELYEE 366
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 366 QIQVEGRVWKDKTEQLLTQVALVAEERDQNISRVQELEAAITELKSAAALLSQEREAQNKA--EPQSSEPS----ERELA 439
Cdd:PRK03918 367 AKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAieELKKAKGKcpvcGRELT 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 440 LEEVLNTLqqdkdavtAQFQAQLRDNEQLSRLCAEQETRLGELERRVENQVQEEEDRRRMLEDVQSDKAT---------- 509
Cdd:PRK03918 447 EEHRKELL--------EEYTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELeeklkkynle 518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 510 -ISRALTQNRTLKDQLAELQnGFVKVTNENMELTNAIQSELhvkKELARRMGELQEELHNIKEQLEVKSQESQGLLAQRE 588
Cdd:PRK03918 519 eLEKKAEEYEKLKEKLIKLK-GEIKSLKKELEKLEELKKKL---AELEKKLDELEEELAELLKELEELGFESVEELEERL 594
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1698335943 589 QlvahlqqysagyqalasEREQLHHQYLQQVQLMDRLHHDESqgrvELEISHSQLNQAQEQLELLVRDNEQLKSEVRE 666
Cdd:PRK03918 595 K-----------------ELEPFYNEYLELKDAEKELEREEK----ELKKLEEELDKAFEELAETEKRLEELRKELEE 651
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
146-596 |
6.61e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 53.57 E-value: 6.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 146 KLDQLTQQTRGLTEQLQKERKEFEdkhskEHGAMREQLQVHIQTIGILVSEKSELQTALQYTQQAARQKSAEAEELNNRL 225
Cdd:pfam05483 371 RLEKNEDQLKIITMELQKKSSELE-----EMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLL 445
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 226 QSSKQRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRLELFRLNNVSEETKQQNSELSEqiklsneekgamkfevedl 305
Cdd:pfam05483 446 QAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQ------------------- 506
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 306 rkrlELADLMLQQCSSQSDPTSATQQAQLLLEEKQQLEMHNHQLLESIGHLQKERDRYAEQIQVEGRVWKDKTEQLLTQV 385
Cdd:pfam05483 507 ----EASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEV 582
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 386 ALVAEERDQNISRVQELEAAITELKSAAALLSQEREA-QNKAEPQSSEPSEREL---ALEEVLNTLQQDKDAVTAQFQAQ 461
Cdd:pfam05483 583 LKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKAlKKKGSAENKQLNAYEIkvnKLELELASAKQKFEEIIDNYQKE 662
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 462 LRDNEqlsrlcAEQETRLGELERRVENQVQEEEDRRRMLEDVQSDKATISRALTQNRTLKDQLAELQNgfvkvtNENMEL 541
Cdd:pfam05483 663 IEDKK------ISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERD------SELGLY 730
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 1698335943 542 TNAIQSELHVKKELARRMGELQEELHNIKEQLEVKSQESQGLLAQREQLVAHLQQ 596
Cdd:pfam05483 731 KNKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKENTAILKD 785
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
119-893 |
9.68e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.15 E-value: 9.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 119 ERELETRNQELAAALDSSNLTNSQLNTKLD----QLTQQTRGLTEQLQKERKEFEDKHSkEHGAMREQLQVHIQTIGILV 194
Cdd:TIGR02169 257 TEEISELEKRLEEIEQLLEELNKKIKDLGEeeqlRVKEKIGELEAEIASLERSIAEKER-ELEDAEERLAKLEAEIDKLL 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 195 SEKSELQTALQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRLELFRLNNVS 274
Cdd:TIGR02169 336 AEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEEL 415
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 275 EETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKRLELADLMLQQcsSQSDPTSATQQAQLLLEEKQQLEMHNHQLLESIG 354
Cdd:TIGR02169 416 QRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQ--LAADLSKYEQELYDLKEEYDRVEKELSKLQRELA 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 355 HLQKERdRYAEQIQVEGR----VWKDKTEQLLTQVALVAEERDQNISRVQ-----ELEAAITE----LKSAAALLSQERE 421
Cdd:TIGR02169 494 EAEAQA-RASEERVRGGRaveeVLKASIQGVHGTVAQLGSVGERYATAIEvaagnRLNNVVVEddavAKEAIELLKRRKA 572
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 422 AQ------NKAEPQSSEPS--ERELALEEVLNTLQQDKDAVTAQFQAqLRDNEQLSRLCAEQE--------TRLGEL--- 482
Cdd:TIGR02169 573 GRatflplNKMRDERRDLSilSEDGVIGFAVDLVEFDPKYEPAFKYV-FGDTLVVEDIEAARRlmgkyrmvTLEGELfek 651
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 483 -----------ERRVENQVQEEEDRRRMLEDVQSDKATISRALTQNRTLKDQLAELQNGFVKVTNENMELTNAIQSELHV 551
Cdd:TIGR02169 652 sgamtggsrapRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQE 731
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 552 KKELARRMGELQEELHNIKEQLEVKSQESQGLLAQREQLVAHLQQYSAGYQALasEREQLHHQYLQQVQLMDRLHHDesq 631
Cdd:TIGR02169 732 EEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDL--EARLSHSRIPEIQAELSKLEEE--- 806
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 632 gRVELEISHSQLNQAQEQLELlvrDNEQLKSEVRELLNSSalasssldhgegRESPQQEDSISASIiipEDFENQKEmeq 711
Cdd:TIGR02169 807 -VSRIEARLREIEQKLNRLTL---EKEYLEKEIQELQEQR------------IDLKEQIKSIEKEI---ENLNGKKE--- 864
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 712 firgALAQVEAERDEARRQLEEEHRlhlaaryqaavalRLEQQHQSHKadhdqhdhahahdqhahcdhdhdhSEGGVPVE 791
Cdd:TIGR02169 865 ----ELEEELEELEAALRDLESRLG-------------DLKKERDELE------------------------AQLRELER 903
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 792 VHQALQVAMEKLQHRFTSLMQEKADLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAImkQKHHEKEQYINMLA-QDK 870
Cdd:TIGR02169 904 KIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRV--EEEIRALEPVNMLAiQEY 981
|
810 820
....*....|....*....|...
gi 1698335943 871 EEMKMKLAELQDLVMRLVAERND 893
Cdd:TIGR02169 982 EEVLKRLDELKEKRAKLEEERKA 1004
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
494-903 |
9.83e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 53.02 E-value: 9.83e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 494 EDRRRMLEDVqsdkATIS-----RALTQNRtLKDqlaelqngfvkvTNENMELTNAIQSE-------LHVKKELARRMGE 561
Cdd:COG1196 155 EERRAIIEEA----AGISkykerKEEAERK-LEA------------TEENLERLEDILGElerqlepLERQAEKAERYRE 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 562 LQEELHNIKEQL-----EVKSQESQGLLAQREQLVAHLQQYSAGYQALASEREQLHHQYLQQVQLMDRLHHDESQGRVEL 636
Cdd:COG1196 218 LKEELKELEAELlllklRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAEL 297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 637 EISHSQLNQAQEQLELLVRDNEQLKSEVRELLNSSALASSSLDHGEgrespqqedsisasiiipEDFENQKEMEQFIRGA 716
Cdd:COG1196 298 ARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELE------------------EELEEAEEELEEAEAE 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 717 LAQVEAERDEARRQLEEEHRLHLAARYQAAVALRLEQQHQSHKADHDQHDHAHAHDQHAHCDHDHDHSEggvpvevhQAL 796
Cdd:COG1196 360 LAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEE--------ALA 431
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 797 QVAMEKLQHRftslmQEKADLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAIMKQKHHEKEQYINMLAQDKEEM--- 873
Cdd:COG1196 432 ELEEEEEEEE-----EALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYegf 506
|
410 420 430
....*....|....*....|....*....|....*
gi 1698335943 874 -----KMKLAELQDLVMRLVAERNDWYSRYTGAVA 903
Cdd:COG1196 507 legvkAALLLAGLRGLAGAVAVLIGVEAAYEAALE 541
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
225-461 |
1.02e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.07 E-value: 1.02e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 225 LQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRLELFRLNNVSEETKQQNSELSEQIKLSNEEKGAMKFEVED 304
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 305 LRKRLELADLMLQQCSSQSDPTSATQQAQLLLEEKQQLEMHNhqLLESIGHLQKERDRYAEQIQVEGRVWKDKTEQLLTQ 384
Cdd:COG4942 95 LRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVR--RLQYLKYLAPARREQAEELRADLAELAALRAELEAE 172
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1698335943 385 VALVAEERDQNISRVQELEAAITELKSAAALLSQEREAQNKaepQSSEPSERELALEEVLNTLQQDKDAVTAQFQAQ 461
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLARLEKELAELAA---ELAELQQEAEELEALIARLEAEAAAAAERTPAA 246
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
142-591 |
1.03e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 53.22 E-value: 1.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 142 QLNTKLDQLTQQTRGLTEQLQKERKEFEDKHSKEHGAMREQLQVHIQtigilvSEKSELQTALQYTQQAARQKSAE---- 217
Cdd:PTZ00121 1319 EAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEK------AEAAEKKKEEAKKKADAAKKKAEekkk 1392
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 218 AEELNNRLQSSKQRVSELERT---------LSSVSTQQKQFEKHNKELEKERDSLRLElfrlNNVSEETKQQNSELSEQI 288
Cdd:PTZ00121 1393 ADEAKKKAEEDKKKADELKKAaaakkkadeAKKKAEEKKKADEAKKKAEEAKKADEAK----KKAEEAKKAEEAKKKAEE 1468
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 289 KLSNEE---KGAMKFEVEDLRKRLELADLMLQQCSSQSDPTSATQQAQLLLEEKQQLEMHNHQLLESIGHLQK-ERDRYA 364
Cdd:PTZ00121 1469 AKKADEakkKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKaEEKKKA 1548
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 365 EQIQVEGRVWKDKTEQLLTQvALVAEERDQNISRVQELEAAITELKSAAALLSQEREAQNKAEPQSSEPSERELA----- 439
Cdd:PTZ00121 1549 DELKKAEELKKAEEKKKAEE-AKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAeelkk 1627
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 440 LEEVLNTLQQDKDAVTAQFQA--QLRDNEQLSRLCAEQETRLGELERRVENQVQEEEDRRRMLEDVQSDKATISRALTQN 517
Cdd:PTZ00121 1628 AEEEKKKVEQLKKKEAEEKKKaeELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEEL 1707
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1698335943 518 RTLKDQLAELQNGFVKVTNENMELTNAIQSELHVKKELARRMGELQEELHNIKEQLEVKSQESQGLLAQREQLV 591
Cdd:PTZ00121 1708 KKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVI 1781
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
439-666 |
1.98e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 1.98e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 439 ALEEVLNTLQQDKDAVTAQFQAQLRDNEQLSRLCAEQETRLGELERRVENQVQEEEDRRRMLEDVQSDKATISRALTQNR 518
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQK 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 519 T-LKDQLAELQNgfvkvtnenMELTNAIQSELHVK--KELARRMGELQEELHNIKEQLEVKSQESQGLLAQREQLVAHLQ 595
Cdd:COG4942 104 EeLAELLRALYR---------LGRQPPLALLLSPEdfLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1698335943 596 QYSAGYQALASEREQLHHQYLQQVQLMDRLHHDESQGRVELEishsQLNQAQEQLELLVRDNEQLKSEVRE 666
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELA----ELQQEAEELEALIARLEAEAAAAAE 241
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
217-748 |
2.88e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.45 E-value: 2.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 217 EAEELNNRLQSSKQRVSELERTLSSVSTQQKQFE---KHNKELEKERDSLR-LELFRLNNVSEETKQQNSELSEQIKLSN 292
Cdd:COG4913 222 DTFEAADALVEHFDDLERAHEALEDAREQIELLEpirELAERYAAARERLAeLEYLRAALRLWFAQRRLELLEAELEELR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 293 EEKGAMKFEVEDLRKRLELADLMLQQCSsqsdptsaTQQAQLLLEEKQQLEMHNHQLLESIGHLQKERDRYAEQIQV--- 369
Cdd:COG4913 302 AELARLEAELERLEARLDALREELDELE--------AQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAAlgl 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 370 ----EGRVWKDKTEQLLTQVALVAEERDQNISRVQELEAAITELKSAAALLSQEREAQNKAepQSSEPSERELALEEVLN 445
Cdd:COG4913 374 plpaSAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERR--KSNIPARLLALRDALAE 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 446 TLQQDKDAVtaQFQA---QLRDNEQLSRLCAEQ------------ETRLGELERRVEN-------QVQEEEDRRRMLEDV 503
Cdd:COG4913 452 ALGLDEAEL--PFVGeliEVRPEEERWRGAIERvlggfaltllvpPEHYAAALRWVNRlhlrgrlVYERVRTGLPDPERP 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 504 QSDKATISRALTQNRT-----LKDQLAElQNGFVKVTNENmELTN---AIQSELHVK----------------------- 552
Cdd:COG4913 530 RLDPDSLAGKLDFKPHpfrawLEAELGR-RFDYVCVDSPE-ELRRhprAITRAGQVKgngtrhekddrrrirsryvlgfd 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 553 -----KELARRMGELQEELHNIKEQLEvKSQESQGLLAQREQLVAHLQQYSAGYQALASEREQLHhqylqqvQLMDRLHH 627
Cdd:COG4913 608 nraklAALEAELAELEEELAEAEERLE-ALEAELDALQERREALQRLAEYSWDEIDVASAEREIA-------ELEAELER 679
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 628 -DESQGRV-----ELEISHSQLNQAQEQLELLVRDNEQLKSEVRELLNSSALASSSLDHGEGRESPQQEDSISASIIIPE 701
Cdd:COG4913 680 lDASSDDLaaleeQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAAL 759
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 1698335943 702 DFENQKEMEQFIRGALAQVEAERDEARRQLEEEHRLHLaARYQAAVA 748
Cdd:COG4913 760 GDAVERELRENLEERIDALRARLNRAEEELERAMRAFN-REWPAETA 805
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
118-579 |
6.06e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 50.40 E-value: 6.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 118 NERELETRNQELAAALDSSNLTNSqlNTKLDQLTQQTRGLTEQLQKERKEFeDKHSKEHGAMREQLQVHIQTIGILVSEK 197
Cdd:TIGR04523 50 KNKEKELKNLDKNLNKDEEKINNS--NNKIKILEQQIKDLNDKLKKNKDKI-NKLNSDLSKINSEIKNDKEQKNKLEVEL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 198 SELQTALQ-------YTQQAARQKSAEAEELNNRLQSSKQRVSELErtlssvsTQQKQFEKHNKELEKERDSLRLELFRL 270
Cdd:TIGR04523 127 NKLEKQKKenkknidKFLTEIKKKEKELEKLNNKYNDLKKQKEELE-------NELNLLEKEKLNIQKNIDKIKNKLLKL 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 271 N---NVSEETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKRLELADLMLQQCSSQSDPTSATQQ-AQLLLEEKQ-QLEMH 345
Cdd:TIGR04523 200 ElllSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNkIKKQLSEKQkELEQN 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 346 NHQLLESIGHLQkerdryaeQIQVEGRVWKDKTEQ-----LLTQVALVAEERDQNISRVQELEAAITELKSAAALLSQER 420
Cdd:TIGR04523 280 NKKIKELEKQLN--------QLKSEISDLNNQKEQdwnkeLKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKEL 351
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 421 EAQNkaepqsSEPSERELALEEVLNTLQQDKDavtaQFQAQLRDNEQLsrlcaeqETRLGELERRVENQVQEEEDRRRML 500
Cdd:TIGR04523 352 TNSE------SENSEKQRELEEKQNEIEKLKK----ENQSYKQEIKNL-------ESQINDLESKIQNQEKLNQQKDEQI 414
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1698335943 501 EDVQSDKATISRaltQNRTLKDQLAELQNGFVKVTNENMELTNAIQSELHVKKELARRMGELQEELHNIKEQLEVKSQE 579
Cdd:TIGR04523 415 KKLQQEKELLEK---EIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKE 490
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
389-837 |
7.68e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 50.34 E-value: 7.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 389 AEERDQNISRVQELEAaitELKSAAALLSQEREAQNKAEPQSSEPSERELALEevlntlqQDKDAVT---AQFQAQLRDN 465
Cdd:COG3096 277 ANERRELSERALELRR---ELFGARRQLAEEQYRLVEMARELEELSARESDLE-------QDYQAASdhlNLVQTALRQQ 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 466 EQLSRLCAEqetrLGELERRVENQVQEEEDRRRMLEDVQsdkATISRALTQNRTLKDQLAELQNGFvkvtneNMELTNAI 545
Cdd:COG3096 347 EKIERYQED----LEELTERLEEQEEVVEEAAEQLAEAE---ARLEAAEEEVDSLKSQLADYQQAL------DVQQTRAI 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 546 QSELHVK-KELARRMGELQE-ELHNIKE-QLEVKSQESQ---GLLAQREQLV---AHLQQYSAGYQALAS-----EREQL 611
Cdd:COG3096 414 QYQQAVQaLEKARALCGLPDlTPENAEDyLAAFRAKEQQateEVLELEQKLSvadAARRQFEKAYELVCKiagevERSQA 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 612 HH-------QYLQQVQLMDRLHHDESQGRvELEISHSQLNQAQEQLELLVRdneqlksevrellnssalasssldhgegr 684
Cdd:COG3096 494 WQtarellrRYRSQQALAQRLQQLRAQLA-ELEQRLRQQQNAERLLEEFCQ----------------------------- 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 685 espqqedSISASIIIPEDFENQkemeqfirgaLAQVEAERDEARRQLEEehrlhlaaryQAAVALRLEQQHQSHKADHDQ 764
Cdd:COG3096 544 -------RIGQQLDAAEELEEL----------LAELEAQLEELEEQAAE----------AVEQRSELRQQLEQLRARIKE 596
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1698335943 765 HDHAHAHDQHAHCDHDHDHSEGGVPVEVHQALQVAMEKLQHRFTSLMQEKADLKERVEELE---HRCIQLSGETDT 837
Cdd:COG3096 597 LAARAPAWLAAQDALERLREQSGEALADSQEVTAAMQQLLEREREATVERDELAARKQALEsqiERLSQPGGAEDP 672
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
327-574 |
9.05e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.91 E-value: 9.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 327 SATQQAQLLLEEKQQLEMHNHQLLESIGHLQKERDRYAEQIQVEGRVWKDKTEQLltQVALVAEERDQNISRVQELEAAI 406
Cdd:COG4913 607 DNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDEI--DVASAEREIAELEAELERLDASS 684
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 407 TELKSAAALLSQEREAQNKAEPQSSEPSERELALEEVLNTLQQDKDAVTAQFQAQLRDNEQLSRLCAEqETRLGELERRV 486
Cdd:COG4913 685 DDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLE-ERFAAALGDAV 763
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 487 ENQVQE--EEDRRRMLEDVQSDKATISRALTQ-NRTLKDQLAELQNGFVKVTNENMELTNAIQSELHVKKELARRM---- 559
Cdd:COG4913 764 ERELREnlEERIDALRARLNRAEEELERAMRAfNREWPAETADLDADLESLPEYLALLDRLEEDGLPEYEERFKELlnen 843
|
250 260
....*....|....*....|....
gi 1698335943 560 ---------GELQEELHNIKEQLE 574
Cdd:COG4913 844 siefvadllSKLRRAIREIKERID 867
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
152-877 |
9.85e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 49.97 E-value: 9.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 152 QQTRGLTEQLQKERKEFEDKHSKEHGAmrEQLQVHIQTIGILVSEKSELQTALQYTQQAAR--QKSAEAEELNNRLQSSK 229
Cdd:TIGR00618 236 QQTQQSHAYLTQKREAQEEQLKKQQLL--KQLRARIEELRAQEAVLEETQERINRARKAAPlaAHIKAVTQIEQQAQRIH 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 230 QRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRLELFRLNNVSEETKQQNSELseqiklsneekgamkfevEDLRKRL 309
Cdd:TIGR00618 314 TELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIR------------------EISCQQH 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 310 ELADLMLQQcssQSDPTSATQQAQLLLEEKQQLEMHNHQLL-----ESIGHLQKERDRYAEQIQVEGRVWKDKTEQLLTQ 384
Cdd:TIGR00618 376 TLTQHIHTL---QQQKTTLTQKLQSLCKELDILQREQATIDtrtsaFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQ 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 385 VAlVAEERDQNISRvQELEAAITELKSAAALLSQEREAQNKAEPQSSEPSERELALEEVLNTLQQdkdavtaQFQAQLRD 464
Cdd:TIGR00618 453 CE-KLEKIHLQESA-QSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNP-------ARQDIDNP 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 465 NEQLSRLCAEQET--RLGELERRVENQVQEEEDRRrmledvQSDKATISRALTQNRTLKDQLAELQNGFVKVTNENMELT 542
Cdd:TIGR00618 524 GPLTRRMQRGEQTyaQLETSEEDVYHQLTSERKQR------ASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQ 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 543 NAIQSELHVKKELA----RRMGELQEELHNIKEQLEV--KSQESQGLLAQREQLVAHLQQYSAGYQALASEREQLhhQYL 616
Cdd:TIGR00618 598 DLTEKLSEAEDMLAceqhALLRKLQPEQDLQDVRLHLqqCSQELALKLTALHALQLTLTQERVREHALSIRVLPK--ELL 675
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 617 QQVQL----MDRLHHDESQGRVELEISHSQLNQAQEQLELLVRDNEQLKSEVRELLNSSALASSSLDHGEGRESPQQEDS 692
Cdd:TIGR00618 676 ASRQLalqkMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTV 755
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 693 ISASIIIPEDFENQKEMEQFIRGALAQVEAERDEARRQLEEEhrlhlaaryQAAVALRLEQQHQSHKADHDQHDHAHAHD 772
Cdd:TIGR00618 756 LKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFNRLREED---------THLLKTLEAEIGQEIPSDEDILNLQCETL 826
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 773 QHAHCDHDHDHSEGGVPVEVHQALQVAMEKLQHRFTSLMQEKADLKERVEELE-HRCIQLSGETDTIGEYIALYQSQRAI 851
Cdd:TIGR00618 827 VQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKIIQLSDKLNgINQIKIQFDGDALIKFLHEITLYANV 906
|
730 740
....*....|....*....|....*.
gi 1698335943 852 MKQKHHEKEQYINMLAQDKEEMKMKL 877
Cdd:TIGR00618 907 RLANQSEGRFHGRYADSHVNARKYQG 932
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
120-569 |
1.07e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 49.73 E-value: 1.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 120 RELETRNQELAAALDSSNLTNSQLNTKLDQLTQQTRGLTEQLQK---------ERKEFEDKHSKEHGAMREQLQVHIQTI 190
Cdd:pfam15921 419 RELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKvssltaqleSTKEMLRKVVEELTAKKMTLESSERTV 498
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 191 gilvsekSELQTALQYTQQAARQKSAEAEELNNRLQSSKQRVSELertlssvstqqKQFEKHNKELEKERDSLRLELFRL 270
Cdd:pfam15921 499 -------SDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHL-----------KNEGDHLRNVQTECEALKLQMAEK 560
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 271 NNVSEETKQQNSELSEQIKLSNEEKGAMKFEVEDLRK-----RLELADLMLQQCSSQSDPTSATQQAQLLLEEKQQLEMH 345
Cdd:pfam15921 561 DKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKeindrRLELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNA 640
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 346 NHQLLESIGHLQKERDR--------------YAEQIQVEGRVWKDKTEQLLT-------QVALVAEERDQNISRVQELEA 404
Cdd:pfam15921 641 GSERLRAVKDIKQERDQllnevktsrnelnsLSEDYEVLKRNFRNKSEEMETttnklkmQLKSAQSELEQTRNTLKSMEG 720
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 405 AITELKSAAALLSQE------------------REAQNKAEPQSSEPSERELALEEVLNTLQQDKDAVTAQFQAQLRDNE 466
Cdd:pfam15921 721 SDGHAMKVAMGMQKQitakrgqidalqskiqflEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQER 800
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 467 QLSRLCAEQETRLGELERRVEN-----QVQEEEDRRRMLEDVQSDKATISRALTQNRTLKDQLaeLQNGFVKVTNENMEL 541
Cdd:pfam15921 801 RLKEKVANMEVALDKASLQFAEcqdiiQRQEQESVRLKLQHTLDVKELQGPGYTSNSSMKPRL--LQPASFTRTHSNVPS 878
|
490 500 510
....*....|....*....|....*....|....*.
gi 1698335943 542 TNAIQSELH--------VKKELARRMGELQEELHNI 569
Cdd:pfam15921 879 SQSTASFLShhsrktnaLKEDPTRDLKQLLQELRSV 914
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
199-736 |
1.51e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 49.37 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 199 ELQTALQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSV--STQQKQFEKHNKELEKERDSLRLELFRLNNVSEE 276
Cdd:PTZ00121 1186 EVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVkkAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHF 1265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 277 TKQQNSELSEQIKLSNEEKGAmkfevEDLRKRLELadlmlqqcsSQSDPTSATQQAQLLLEEKQQLEMHNHQllesighl 356
Cdd:PTZ00121 1266 ARRQAAIKAEEARKADELKKA-----EEKKKADEA---------KKAEEKKKADEAKKKAEEAKKADEAKKK-------- 1323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 357 QKERDRYAEQIQVEGRVWKDKTEQLLTQVALVAEERDQNISRVQELEAAITELKSAAALLSQEREAQNKAEPQSSEPSER 436
Cdd:PTZ00121 1324 AEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEED 1403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 437 ELALEEVLNTLQQDKDAVTAQFQAQLRDNEQLSRLCAEQETRLGELERRVENQVQEEEDRRRMLEDVQSD----KATISR 512
Cdd:PTZ00121 1404 KKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADeakkKAEEAK 1483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 513 ALTQNRTLKDQLAELQNGFVKVTNENMELTNAIQSELHVKKELAR-----------RMGELQEELHNIKEQLEVKSQESQ 581
Cdd:PTZ00121 1484 KADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKkaeeakkadeaKKAEEKKKADELKKAEELKKAEEK 1563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 582 GLLAQREQLVAHLQQYSAGYQALASEREQLHHQYLQQVQLMDRLHHDESQGRVELEISHSQLNQAQEQLELLVRDNEQLK 661
Cdd:PTZ00121 1564 KKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEA 1643
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1698335943 662 SEVRELLNSSALASSSLDHGEGRESPQQEDSISASIIIPEDFENQKEMEQFIRGALAQVEAErdEARRQLEEEHR 736
Cdd:PTZ00121 1644 EEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAE--ELKKKEAEEKK 1716
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
159-886 |
2.54e-05 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 48.58 E-value: 2.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 159 EQLQKERKEFEDKHSKEHGAMReqlqvhiQTIGILVSEKSELQTALQYTQQAARQKSAEAEELNNRLQSSKQRVSEL--- 235
Cdd:pfam15921 88 KDLQRRLNESNELHEKQKFYLR-------QSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAkcl 160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 236 -ERTLSSVSTQQKQ---------------------FEKHNKELEKERDSLRLELFRL--NNVSEETKQQNSELS------ 285
Cdd:pfam15921 161 kEDMLEDSNTQIEQlrkmmlshegvlqeirsilvdFEEASGKKIYEHDSMSTMHFRSlgSAISKILRELDTEISylkgri 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 286 ----EQIK-LSNEEKGAMKFEVEDLRKRL---------ELADLMLQQCSSQSDPTSATQQAQLLLEEKQQlemHNHQLLE 351
Cdd:pfam15921 241 fpveDQLEaLKSESQNKIELLLQQHQDRIeqlisehevEITGLTEKASSARSQANSIQSQLEIIQEQARN---QNSMYMR 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 352 SIGHLQKERDRYAEQIQVEGRVWKDKTEQLLTQVALVAEErdqnisrvqeleaaITELKSAAALLSQER---EAQNKAEP 428
Cdd:pfam15921 318 QLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSE--------------LTEARTERDQFSQESgnlDDQLQKLL 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 429 QSSEPSERELALEEVLNTLQQDKDAVTAQFQAQLR-----DNEQLSRLCAEQETRLGELERRVENQVQEEEDRRRMLEDV 503
Cdd:pfam15921 384 ADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRrelddRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKV 463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 504 QSDKATISRALTQNRTLKDQLAElqngfVKVTNENMELTNAIQSELHVKKElaRRMGELQEELHNIKEQLEVKSQESQGL 583
Cdd:pfam15921 464 SSLTAQLESTKEMLRKVVEELTA-----KKMTLESSERTVSDLTASLQEKE--RAIEATNAEITKLRSRVDLKLQELQHL 536
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 584 LAQREQLvAHLQQYSAGYQALASEREQLHHQYLQQVQLMDRL--HHDESQGRVELEishsqlnqaQEQLELLVRDNeqlK 661
Cdd:pfam15921 537 KNEGDHL-RNVQTECEALKLQMAEKDKVIEILRQQIENMTQLvgQHGRTAGAMQVE---------KAQLEKEINDR---R 603
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 662 SEVRELLNSSALASSSLDHGEGRESPQQEDSISASIIIPEDFENQKEMEQFIRGALAQVEAERDEARRQLEEEHRLHLAA 741
Cdd:pfam15921 604 LELQEFKILKDKKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNF 683
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 742 RYQAAvalrlEQQHQSHKADHDQHDHAHAHDQHAHCDHDHDHSEG-------GVPVEVH------QALQVAMEKLQHRFT 808
Cdd:pfam15921 684 RNKSE-----EMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGhamkvamGMQKQITakrgqiDALQSKIQFLEEAMT 758
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1698335943 809 SLMQEKADLKERVEELEHRCIQLSGETDTIGEYIALYQSQRAIMKQKHHEKEqyinmLAQDKEEmkMKLAELQDLVMR 886
Cdd:pfam15921 759 NANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANME-----VALDKAS--LQFAECQDIIQR 829
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
195-436 |
3.29e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 3.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 195 SEKSELQTALQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRLELFRLNNVS 274
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 275 EETKQQNSE-LSEQIKLSNEEKGAMKFEVEDLRKRLELADLMLQQCSSQSDPTSATQQAQLLLEE-KQQLEMHNHQLLES 352
Cdd:COG4942 100 EAQKEELAElLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAAlRAELEAERAELEAL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 353 IGHLQKERDRYAEQiqvegrvwKDKTEQLLTQvalVAEERDQNISRVQELEAAITELKSAAALLSQEREAQNKAEPQSSE 432
Cdd:COG4942 180 LAELEEERAALEAL--------KAERQKLLAR---LEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGF 248
|
....
gi 1698335943 433 PSER 436
Cdd:COG4942 249 AALK 252
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
119-578 |
5.18e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 47.38 E-value: 5.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 119 ERELETRNQELAAALDSSNLTNSQLNTKLDQLTQQTRGLTEQLqKERKEFEdKHSKEHGAMREQLQVHIQTIGILVSEKS 198
Cdd:COG5022 963 ESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELS-KQYGALQ-ESTKQLKELPVEVAELQSASKIISSEST 1040
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 199 ELQTaLQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFekhnkELEKERDSLRLELFRLNNVSEETK 278
Cdd:COG5022 1041 ELSI-LKPLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKQLYQLESTE-----NLLKTINVKDLEVTNRNLVKPANV 1114
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 279 QQNSeLSEQIKlSNEEKGAMKF------EVEDLRKRLELADLMLqQCSSQSDPTSATQQAQLLLEEKQQLEMHNHqLLES 352
Cdd:COG5022 1115 LQFI-VAQMIK-LNLLQEISKFlsqlvnTLEPVFQKLSVLQLEL-DGLFWEANLEALPSPPPFAALSEKRLYQSA-LYDE 1190
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 353 IGHLQKER--DRYAEQIQVEGRV---W--KDKTEQLLTQVALVAE--ERDQNISRVQELEAAITELKSaAALLSQEREAQ 423
Cdd:COG5022 1191 KSKLSSSEvnDLKNELIALFSKIfsgWprGDKLKKLISEGWVPTEysTSLKGFNNLNKKFDTPASMSN-EKLLSLLNSID 1269
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 424 NKAEPQSSEPSERELALEEVL--------NTLQQDKDAVTAQFQAQLRDN-EQLSRLCAEQETrlgeleRRVENQVQEEE 494
Cdd:COG5022 1270 NLLSSYKLEEEVLPATINSLLqyinvglfNALRTKASSLRWKSATEVNYNsEELDDWCREFEI------SDVDEELEELI 1343
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 495 DRRRMLEDVQSDKATISR----------ALTQNRTLKDQLAELQNGFVKVTNENMELTNAIQSELHVKKELARRMGELQE 564
Cdd:COG5022 1344 QAVKVLQLLKDDLNKLDElldacyslnpAEIQNLKSRYDPADKENNLPKEILKKIEALLIKQELQLSLEGKDETEVHLSE 1423
|
490
....*....|....
gi 1698335943 565 ELHNIKEQLEVKSQ 578
Cdd:COG5022 1424 IFSEEKSLISLDRN 1437
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
273-589 |
5.23e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 47.43 E-value: 5.23e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 273 VSEETKQQNSELSEQIKLSNEEKGAMKfEVEDlRKRLELADLMLQqcssqsdptSATQQAQLLLEEKQQLEMHNHQLLES 352
Cdd:pfam17380 284 VSERQQQEKFEKMEQERLRQEKEEKAR-EVER-RRKLEEAEKARQ---------AEMDRQAAIYAEQERMAMERERELER 352
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 353 IGhlQKERDRYAEQIQvegrvwkdkteqlltqvalvAEERDQNISRVQELEAAITELKSAAALLSQEREAQNKAEPQSSE 432
Cdd:pfam17380 353 IR--QEERKRELERIR--------------------QEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEE 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 433 pseRELALEEVLNTLQQDKDAVTAQFQAQLRDNEQlSRLCAEQETRLGELERR--VENQVQEEEDRRRMLEDVQSDKATI 510
Cdd:pfam17380 411 ---RQRKIQQQKVEMEQIRAEQEEARQREVRRLEE-ERAREMERVRLEEQERQqqVERLRQQEEERKRKKLELEKEKRDR 486
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 511 SRALTQNRTL--------KDQLAELQNGFVKVTNENMELTNAIQSELHVKK-ELARRMGELQEELHNIKEQLEVKSQESQ 581
Cdd:pfam17380 487 KRAEEQRRKIlekeleerKQAMIEEERKRKLLEKEMEERQKAIYEEERRREaEEERRKQQEMEERRRIQEQMRKATEERS 566
|
....*...
gi 1698335943 582 GLLAQREQ 589
Cdd:pfam17380 567 RLEAMERE 574
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
254-666 |
5.89e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.07 E-value: 5.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 254 KELEKERDSLRLELFRLNNVSEETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKRLELADLMLQQCSSQSDPTSATQQAQ 333
Cdd:COG4717 49 ERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 334 LLLEEKQQLEMHNHQLLESIGHLQKERDRYAE------QIQVEGRVWKDKTEQLLTQVALVAEERDQN-ISRVQELEAAI 406
Cdd:COG4717 129 PLYQELEALEAELAELPERLEELEERLEELREleeeleELEAELAELQEELEELLEQLSLATEEELQDlAEELEELQQRL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 407 TELKSAAALLSQEREAQNKAEPQSSEPSERElALEEVLNTLQQDKDAVTAQFQAQLRDNEQLSRLCAEQE---TRLGELE 483
Cdd:COG4717 209 AELEEELEEAQEELEELEEELEQLENELEAA-ALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGvlfLVLGLLA 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 484 RRVENQVQEEEDRRRMLEDVQSDKAtisRALTQNRTLKDQLAELQNGFVKVTNENMELTNAIQSelhvKKELARRMGELQ 563
Cdd:COG4717 288 LLFLLLAREKASLGKEAEELQALPA---LEELEEEELEELLAALGLPPDLSPEELLELLDRIEE----LQELLREAEELE 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 564 EELHNIKEQLEVKSQESQGLLAQREQLVAHLQQYSAgYQALASEREQLHHQYLQQVQLMDRLHHDESQGRVELEISHS-- 641
Cdd:COG4717 361 EELQLEELEQEIAALLAEAGVEDEEELRAALEQAEE-YQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELee 439
|
410 420
....*....|....*....|....*
gi 1698335943 642 QLNQAQEQLELLVRDNEQLKSEVRE 666
Cdd:COG4717 440 ELEELEEELEELREELAELEAELEQ 464
|
|
| Macoilin |
pfam09726 |
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 ... |
30-264 |
7.30e-05 |
|
Macoilin family; The Macoilin proteins has an N-terminal portion that is composed of 5 trasnmembrane helices, followed by a C-terminal coiled-coil region. Macoilin is a highly conserved protein present in eukaryotes. Macoilin appears to be found in the ER and be involved in the function of neurons.
Pssm-ID: 462859 [Multi-domain] Cd Length: 670 Bit Score: 46.77 E-value: 7.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 30 VGERGSSTGGAGAKKKRKVKGQSQTDAPSTDRSSPDNDYHDTNGGDNSMEENRPLSSTESLRQLSQQLNGLVSGSSVayv 109
Cdd:pfam09726 315 VSSKSSSSSSSSNKNYKNASGGSANSSNSSPRSHSHNSGSVTSSSSSKNSKKQKGPGGKSGARHKDPAENCIPNNQL--- 391
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 110 ngdSGSSGNEReLETRNQELAAALDSSNLTNSQLNTKLDQLTQQTRGLTEQLQKERKEFEDKHSKEHGAMrEQLQVHIQT 189
Cdd:pfam09726 392 ---SKPDALVR-LEQDIKKLKAELQASRQTEQELRSQISSLTSLERSLKSELGQLRQENDLLQTKLHNAV-SAKQKDKQT 466
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 190 IGIL-----------VSEKSELQTALQYTQQ----AARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNK 254
Cdd:pfam09726 467 VQQLekrlkaeqearASAEKQLAEEKKRKKEeeatAARAVALAAASRGECTESLKQRKRELESEIKKLTHDIKLKEEQIR 546
|
250
....*....|
gi 1698335943 255 ELEKERDSLR 264
Cdd:pfam09726 547 ELEIKVQELR 556
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
171-733 |
8.35e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.83 E-value: 8.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 171 KHSKEHGAMREQLQVHIQTIGILVSEKSE-----LQTALQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQ 245
Cdd:COG4913 259 ELAERYAAARERLAELEYLRAALRLWFAQrrlelLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGD 338
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 246 QKQfekhnkELEKERDSLRLELFRLNNVSEETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKRL--ELADLMLQQCSSQS 323
Cdd:COG4913 339 RLE------QLEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEALeeELEALEEALAEAEA 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 324 DPTSATQQAQLLLEEKQQLE-------MHNHQLLESI-GHLQKERDR---YAEQIQV--EGRVWKDKTEQLLTQVA---L 387
Cdd:COG4913 413 ALRDLRRELRELEAEIASLErrksnipARLLALRDALaEALGLDEAElpfVGELIEVrpEEERWRGAIERVLGGFAltlL 492
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 388 VAEERdqnisrVQELEAAITELKSAAALLSQeREAQNKAEPQSSEPSERELA-------------LEEVLN--------- 445
Cdd:COG4913 493 VPPEH------YAAALRWVNRLHLRGRLVYE-RVRTGLPDPERPRLDPDSLAgkldfkphpfrawLEAELGrrfdyvcvd 565
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 446 ---TLQQDKDAVTAQFQA-------QLRDNEQLSR----------LCAEQETRLGELERRVENQVQEEEDRRRMLEDVQS 505
Cdd:COG4913 566 speELRRHPRAITRAGQVkgngtrhEKDDRRRIRSryvlgfdnraKLAALEAELAELEEELAEAEERLEALEAELDALQE 645
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 506 DKATISRALTQNRTLKDqLAELQNGFVKVTNENMELTNAiQSELhvkKELARRMGELQEELHNIKEQLEVKSQESQGLLA 585
Cdd:COG4913 646 RREALQRLAEYSWDEID-VASAEREIAELEAELERLDAS-SDDL---AALEEQLEELEAELEELEEELDELKGEIGRLEK 720
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 586 QREQLVAHLQQYSAGYQALASEREQLHHQYLQQV--QLMDRLHHDESQGRVELEISH--SQLNQAQEQLELLVRD-NEQL 660
Cdd:COG4913 721 ELEQAEEELDELQDRLEAAEDLARLELRALLEERfaAALGDAVERELRENLEERIDAlrARLNRAEEELERAMRAfNREW 800
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1698335943 661 KSEVRELLNSSALA---SSSLDHGEGRESPQQEdsisasiiipEDFENQKE--MEQFIRGALAQVEAERDEARRQLEE 733
Cdd:COG4913 801 PAETADLDADLESLpeyLALLDRLEEDGLPEYE----------ERFKELLNenSIEFVADLLSKLRRAIREIKERIDP 868
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
180-614 |
1.83e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 45.71 E-value: 1.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 180 REQLQVHIQTIGILVSEKSELQTALQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKhnkeleke 259
Cdd:COG3096 277 ANERRELSERALELRRELFGARRQLAEEQYRLVEMARELEELSARESDLEQDYQAASDHLNLVQTALRQQEK-------- 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 260 RDSLRLELFRLNNVSEETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKrlELADLMlQQCSSQSDPTSATQQAQLLLEEK 339
Cdd:COG3096 349 IERYQEDLEELTERLEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLKS--QLADYQ-QALDVQQTRAIQYQQAVQALEKA 425
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 340 QQLEMHNHQLLESIghlqkerDRYAEQIQVEgrvwkdktEQLLTQVALVAEER--DQNISRVQeLEAAITELKSAAALLS 417
Cdd:COG3096 426 RALCGLPDLTPENA-------EDYLAAFRAK--------EQQATEEVLELEQKlsVADAARRQ-FEKAYELVCKIAGEVE 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 418 QEREAQNKAEPQSSEPSERELAleevlntlqqdkdAVTAQFQAQLRDNEQLSRLCAEQETRLGELERRVENQVQEEEDrr 497
Cdd:COG3096 490 RSQAWQTARELLRRYRSQQALA-------------QRLQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEE-- 554
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 498 rmLEDVQSD-KATISRALTQNRTLKDQLAELQngfvkvtnENMELTNAIQSELHvKKELARRmgELQEELHNIKEQLEVK 576
Cdd:COG3096 555 --LEELLAElEAQLEELEEQAAEAVEQRSELR--------QQLEQLRARIKELA-ARAPAWL--AAQDALERLREQSGEA 621
|
410 420 430
....*....|....*....|....*....|....*...
gi 1698335943 577 SQESQGLLAQREQLVAHLQQYSAGYQALASEREQLHHQ 614
Cdd:COG3096 622 LADSQEVTAAMQQLLEREREATVERDELAARKQALESQ 659
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
121-425 |
1.94e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 45.40 E-value: 1.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 121 ELETRNQELAAALDSSNLTNSQLNTKLDQLTQQTR---GLTEQLQKERKEFED-KHSKEHGAMRE-------------QL 183
Cdd:TIGR04523 247 EISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKkikELEKQLNQLKSEISDlNNQKEQDWNKElkselknqekkleEI 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 184 QVHI-----------QTIGILVSEKSELQTALQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKH 252
Cdd:TIGR04523 327 QNQIsqnnkiisqlnEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKL 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 253 NKELEKERDSLRLELFRLNNVSEETKQQNSELSEQIKLSNEEKGAMKFEVEDLRK-------------------RLELAD 313
Cdd:TIGR04523 407 NQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNtresletqlkvlsrsinkiKQNLEQ 486
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 314 LMLQQCSSQSDPTSATQQAQLLLEEKQQLEMHNHQLLESIGHLQKERDRYAEQI-QVEGRVWKDKTEQLLTQVALVAEER 392
Cdd:TIGR04523 487 KQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKIsDLEDELNKDDFELKKENLEKEIDEK 566
|
330 340 350
....*....|....*....|....*....|...
gi 1698335943 393 DQNISRVQELEAAITELKSAAALLSQEREAQNK 425
Cdd:TIGR04523 567 NKEIEELKQTQKSLKKKQEEKQELIDQKEKEKK 599
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
254-496 |
2.19e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 2.19e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 254 KELEKERDSLRLELFRLNNVSEETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKRLELADLMLQQcssqsdptSATQQAQ 333
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAE--------LEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 334 LlleeKQQLEMHNHQLLESIGHLQkerdRYAEQIQVEGRVWKDKTEQLLTQVALVAEERDQNISRVQELEAAITELKSAA 413
Cdd:COG4942 95 L----RAELEAQKEELAELLRALY----RLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALR 166
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 414 ALLSQEREAQNKAEpqssepsERELALEEVLNTLQQDKDAVTAQFQAQLRDNEQLSRLCAEQETRLGELERRVENQVQEE 493
Cdd:COG4942 167 AELEAERAELEALL-------AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAA 239
|
...
gi 1698335943 494 EDR 496
Cdd:COG4942 240 AER 242
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
216-307 |
2.50e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 44.85 E-value: 2.50e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 216 AEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKE---LEKERDSLRLELFRLNNVSEETKQQNSELSEQIKLSN 292
Cdd:COG2433 427 AEVEELEAELEEKDERIERLERELSEARSEERREIRKDREisrLDREIERLERELEEERERIEELKRKLERLKELWKLEH 506
|
90
....*....|....*
gi 1698335943 293 EEKGAMKFEVEDLRK 307
Cdd:COG2433 507 SGELVPVKVVEKFTK 521
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
254-527 |
2.60e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.29 E-value: 2.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 254 KELEKERDSLRLELFRLNNVSEETKQQNSELSEQIKLSN--EEKGAMKFEVEDLRKRLELADLMLQQC-SSQSDPTSATQ 330
Cdd:COG4913 613 AALEAELAELEEELAEAEERLEALEAELDALQERREALQrlAEYSWDEIDVASAEREIAELEAELERLdASSDDLAALEE 692
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 331 QAQLLLEEKQQLEMHNHQLLESIGHLQKERDRYAEQIQvegrvwkdkteqlLTQVALVAEERDQNISRVQELEAAITELK 410
Cdd:COG4913 693 QLEELEAELEELEEELDELKGEIGRLEKELEQAEEELD-------------ELQDRLEAAEDLARLELRALLEERFAAAL 759
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 411 SAAALLSQEREAQNKAEPQSSEPSERELALEEVLNTLQQDKDAVTAQFQAQLRDNEQLSRLCAEQETRlgELERRvenqv 490
Cdd:COG4913 760 GDAVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRLEED--GLPEY----- 832
|
250 260 270
....*....|....*....|....*....|....*...
gi 1698335943 491 qEEEDRRRMLEDVQSDKATISRALTQN-RTLKDQLAEL 527
Cdd:COG4913 833 -EERFKELLNENSIEFVADLLSKLRRAiREIKERIDPL 869
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
120-314 |
4.92e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 4.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 120 RELETRNQELAAALDSSNLTNSQLNTKLDQLTQQTRGLTEQLQKERKEFedkhSKEHGAMreQLQVHIQTIGILVSEKSE 199
Cdd:COG4942 58 AALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQKEEL----AELLRAL--YRLGRQPPLALLLSPEDF 131
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 200 LQTA--LQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRLELFRLNNVSEET 277
Cdd:COG4942 132 LDAVrrLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAEL 211
|
170 180 190
....*....|....*....|....*....|....*..
gi 1698335943 278 KQQNSELSEQIKLSNEEKGAMKFEVEDLRKRLELADL 314
Cdd:COG4942 212 AAELAELQQEAEELEALIARLEAEAAAAAERTPAAGF 248
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
140-259 |
1.12e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 43.02 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 140 NSQLNTKLDQLTQQTRGLTEQLQKERKEFeDKHSKEHGAMREQLQVHIQTIGILVSEKSELqtALQYTQQAARQKSAEAE 219
Cdd:PRK04863 987 NEKLRQRLEQAEQERTRAREQLRQAQAQL-AQYNQVLASLKSSYDAKRQMLQELKQELQDL--GVPADSGAEERARARRD 1063
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1698335943 220 ELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKE 259
Cdd:PRK04863 1064 ELHARLSANRSRRNQLEKQLTFCEAEMDNLTKKLRKLERD 1103
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
196-734 |
1.18e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.21 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 196 EKSELQTALQYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRLELFRLNNVSE 275
Cdd:PTZ00121 1309 KKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAE 1388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 276 ETKQqnselSEQIKLSNEEKgamKFEVEDLRKRlELADLMLQQCSSQSDPTSATQQAQLLLEEKQQLEMHNHqllesigh 355
Cdd:PTZ00121 1389 EKKK-----ADEAKKKAEED---KKKADELKKA-AAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKK-------- 1451
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 356 lQKERDRYAEQIqvegrvwKDKTEQllTQVALVAEERDQNISRVQELEAAITELKSAAALLSQEREAQNKAEPQSSEPSE 435
Cdd:PTZ00121 1452 -KAEEAKKAEEA-------KKKAEE--AKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEA 1521
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 436 RElalEEVLNTLQQDKDAVTAQFQAQLRDNEQLSRlcaEQETRLGELERRVENQVQEEEDRRRMLEdvqsdKATISRALT 515
Cdd:PTZ00121 1522 KK---ADEAKKAEEAKKADEAKKAEEKKKADELKK---AEELKKAEEKKKAEEAKKAEEDKNMALR-----KAEEAKKAE 1590
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 516 QNRTlkdqlaelqngfvkvtnenMELTNAIQSELHVKKELARRMGELQEELHNIKEQLEVKSQESQgLLAQREQLVAHLQ 595
Cdd:PTZ00121 1591 EARI-------------------EEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQ-LKKKEAEEKKKAE 1650
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 596 QYSAGYQALASEREQLHHQYLQQVQLMDRLHHDESQGRVELEISHSQLNQAQEQLELLVRDNEqlksEVRELLNSSALAS 675
Cdd:PTZ00121 1651 ELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAE----EKKKAEELKKAEE 1726
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*....
gi 1698335943 676 SSLDHGEGRESPQQEDSISASIIIPEDfENQKEMEQFIRGALAQVEAERDEARRQLEEE 734
Cdd:PTZ00121 1727 ENKIKAEEAKKEAEEDKKKAEEAKKDE-EEKKKIAHLKKEEEKKAEEIRKEKEAVIEEE 1784
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
336-735 |
1.23e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 42.72 E-value: 1.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 336 LEEKQQLEMHN--HQLLESIGHLQKERDRYAEQiqvegrvwKDKTEQLLTQVALVAEERDQNISRVQELEAAITELKSAA 413
Cdd:PRK02224 196 IEEKEEKDLHErlNGLESELAELDEEIERYEEQ--------REQARETRDEADEVLEEHEERREELETLEAEIEDLRETI 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 414 ALLSQEREA-----QNKAEPQSSEPSERELALEEV------LNTLQQDKDAVTAQfQAQLRDNEQLSRLCA----EQETR 478
Cdd:PRK02224 268 AETEREREElaeevRDLRERLEELEEERDDLLAEAglddadAEAVEARREELEDR-DEELRDRLEECRVAAqahnEEAES 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 479 LGELERRVENQVQEEEDRRRMLE-DVQSDKATISRALTQNRTLKDQLAELQNGFVKVTNENMELTNAIQSELHVKKELAR 557
Cdd:PRK02224 347 LREDADDLEERAEELREEAAELEsELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRE 426
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 558 RMGELQEELHNIKEQLE-----------------VKSQESQGLLAQREQLVAHLQQYSAGYQALASEREQLHHQYLQQVQ 620
Cdd:PRK02224 427 REAELEATLRTARERVEeaealleagkcpecgqpVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVE 506
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 621 LMDRLhhDESQGRVE-----LEISHSQLNQAQEQLELLVRDNEQLKSEVRELLNSSALASSSLDH------------GEG 683
Cdd:PRK02224 507 AEDRI--ERLEERREdleelIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEareevaelnsklAEL 584
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*....
gi 1698335943 684 RESPQQEDSISASIIIPEDFENQKEMEQFIRGALAQVE-------AERDEARRQLEEEH 735
Cdd:PRK02224 585 KERIESLERIRTLLAAIADAEDEIERLREKREALAELNderrerlAEKRERKRELEAEF 643
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
149-267 |
1.77e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 42.63 E-value: 1.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 149 QLTQQTRGLTEQLQKERKEFEDKHSKEHGAMREQLQVHIQTIGILVSEKSELQTALQYTQQAAR-------QKSAEAE-- 219
Cdd:COG3096 977 GLLGENSDLNEKLRARLEQAEEARREAREQLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELEQeleelgvQADAEAEer 1056
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1698335943 220 ------ELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRLEL 267
Cdd:COG3096 1057 arirrdELHEELSQNRSRRSQLEKQLTRCEAEMDSLQKRLRKAERDYKQEREQV 1110
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
376-611 |
1.78e-03 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 41.98 E-value: 1.78e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 376 DKTEQLLTQVALVAEERDQNISRVQELEAAITELKSAAALLSQEREAQNKAEPQSSEPSERELALEEVLNTLQQDKDAVT 455
Cdd:pfam19220 17 DRLEDLRSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERAAYGKLRRELAGLTRRLSAAEGELEELVARLAKLE 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 456 AQFQAQLRDNEQLSRLCAEQETRLGELERRVENQVQE----EEDRRRMLEDVQSDKATISRALTQNRTLKDQLAELqngf 531
Cdd:pfam19220 97 AALREAEAAKEELRIELRDKTAQAEALERQLAAETEQnralEEENKALREEAQAAEKALQRAEGELATARERLALL---- 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 532 vkvTNENMELTNAIQSELHVKKELARRMGELQEELHNIKEQLEVKSQESQGLLAQREQLVAhlqQYSAGYQALASEREQL 611
Cdd:pfam19220 173 ---EQENRRLQALSEEQAAELAELTRRLAELETQLDATRARLRALEGQLAAEQAERERAEA---QLEEAVEAHRAERASL 246
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
133-665 |
1.88e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 42.31 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 133 LDSSNLTNSQLNTKLDQLTQQTRGLTEQLQKERKEFEDKHSKEhgAMREQ----LQVHIQTIGILVSEKSELQTALQYTQ 208
Cdd:TIGR04523 154 LEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKL--LKLELllsnLKKKIQKNKSLESQISELKKQNNQLK 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 209 QAARQKSAEAEELNNRLQSSKQRV----SELERTLSSVSTQQKQFEKHNK---ELEKERDSLRLELFRLNNVSEEtkQQN 281
Cdd:TIGR04523 232 DNIEKKQQEINEKTTEISNTQTQLnqlkDEQNKIKKQLSEKQKELEQNNKkikELEKQLNQLKSEISDLNNQKEQ--DWN 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 282 SELSEQIKlsNEEKgamkfevedlrkrlELADLMLQQCSSQSDPTSATQQAQLLLEEKQQLEMHNHQLLESIghlqKERD 361
Cdd:TIGR04523 310 KELKSELK--NQEK--------------KLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQREL----EEKQ 369
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 362 RYAEQIQVEGRVWKDKTEQLLTQVALVAEERDQNISRVQELEAAITELKSAAALLSQE----REAQNKAEPQSSEPSERE 437
Cdd:TIGR04523 370 NEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEierlKETIIKNNSEIKDLTNQD 449
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 438 LALEEVLNTLQQDKDavtaqfqaqlrdneqlsrlcaEQETRLGELERRVENQVQEEEDRRRMLEDVQSdkatisraltQN 517
Cdd:TIGR04523 450 SVKELIIKNLDNTRE---------------------SLETQLKVLSRSINKIKQNLEQKQKELKSKEK----------EL 498
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 518 RTLKDQLAELQNGFVKVTNENMELTNAIQSELHVKKELARRMGELQEELHNIKEQLEVKSQESQGLLAQREqlvahLQQY 597
Cdd:TIGR04523 499 KKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENLEKEIDEKNKE-----IEEL 573
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1698335943 598 SAGYQALASEREQLHhqylqqvQLMDRLHHDESQGRVELEISHSQLNQAQEQLELLVRDNEQLKSEVR 665
Cdd:TIGR04523 574 KQTQKSLKKKQEEKQ-------ELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIK 634
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
226-427 |
2.06e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.93 E-value: 2.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 226 QSSKQRVSELERTLSSVSTQQKQFEKHNKELEKerdslRLELFRLNNVSEETKQQNSELSEQIKLSNEEKGAMKFEVEDL 305
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEA-----ALEEFRQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 306 RKRLELADLMLQQCSSQSDPTSATQQAQLLLEEKQQLEMHNHQLLESIGH-------LQKERDRYAEQIQVEGRvwkdkt 378
Cdd:COG3206 239 EARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSARYTPnhpdviaLRAQIAALRAQLQQEAQ------ 312
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 1698335943 379 eqllTQVALVAEERDQNISRVQELEAAITELKSAAALLSQ--------EREAQNKAE 427
Cdd:COG3206 313 ----RILASLEAELEALQAREASLQAQLAQLEARLAELPEleaelrrlEREVEVARE 365
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
135-367 |
2.54e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 41.96 E-value: 2.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 135 SSNLTNSQLNTKLDQLTQQTRGLTEQLQKER---KEFEDKHSK---EHGAMREQLQVHIQTIGILVSEkselQTALQYTQ 208
Cdd:PRK10929 99 PPNMSTDALEQEILQVSSQLLEKSRQAQQEQdraREISDSLSQlpqQQTEARRQLNEIERRLQTLGTP----NTPLAQAQ 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 209 QAARQKSAEAEelnnrlqssKQRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRLELFRLNNVSEETKQQNSELS-EQ 287
Cdd:PRK10929 175 LTALQAESAAL---------KALVDELELAQLSANNRQELARLRSELAKKRSQQLDAYLQALRNQLNSQRQREAERAlES 245
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 288 IKLSNEEKGAM-KFEVEDLRKRLELADLMLQQC-------SSQSDPTSATQQAQLLL----EEKQQL------------- 342
Cdd:PRK10929 246 TELLAEQSGDLpKSIVAQFKINRELSQALNQQAqrmdliaSQQRQAASQTLQVRQALntlrEQSQWLgvsnalgealraq 325
|
250 260 270
....*....|....*....|....*....|.
gi 1698335943 343 -----EMHNHQLLES-IGHLQKERDRYAEQI 367
Cdd:PRK10929 326 varlpEMPKPQQLDTeMAQLRVQRLRYEDLL 356
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
127-349 |
2.74e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 41.82 E-value: 2.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 127 QELAAALDSSNLTNSQLNTKLDQLTQQTRGLTEQLQKERKEFEDKHSKEHGAMR-EQLQvhiqtigilvSEKSELQTALQ 205
Cdd:PRK11281 69 LALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLSTLSlRQLE----------SRLAQTLDQLQ 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 206 YTQQAARQKSAEAEELNNR-------LQSSKQRVSELERTLSSVSTQQKQFEkhnkelEKERDSLRLELFRLNNVSEETK 278
Cdd:PRK11281 139 NAQNDLAEYNSQLVSLQTQperaqaaLYANSQRLQQIRNLLKGGKVGGKALR------PSQRVLLQAEQALLNAQNDLQR 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 279 QQ---NSEL----SEQIKLSNEEKGAMKFEVEDL-----RKRLELADLMLQQCSSQsDPTSATQQAQLLleeKQQLEmHN 346
Cdd:PRK11281 213 KSlegNTQLqdllQKQRDYLTARIQRLEHQLQLLqeainSKRLTLSEKTVQEAQSQ-DEAARIQANPLV---AQELE-IN 287
|
...
gi 1698335943 347 HQL 349
Cdd:PRK11281 288 LQL 290
|
|
| RecN |
COG0497 |
DNA repair ATPase RecN [Replication, recombination and repair]; |
333-607 |
2.75e-03 |
|
DNA repair ATPase RecN [Replication, recombination and repair];
Pssm-ID: 440263 [Multi-domain] Cd Length: 555 Bit Score: 41.60 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 333 QLLLEEKQQLEmhnhqLLESIGHLQKERDRYAEQIQVegrvWKDKTEQLLtqvALVAEERDQNiSRVQELEAAITELKSA 412
Cdd:COG0497 135 QSLLDPDAQRE-----LLDAFAGLEELLEEYREAYRA----WRALKKELE---ELRADEAERA-RELDLLRFQLEELEAA 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 413 A------ALLSQEREAQNKAEpqssepsERELALEEVLNTLQQDKDAVTAQFQAQLRDNEQLSRLcaeqETRLGELERRV 486
Cdd:COG0497 202 AlqpgeeEELEEERRRLSNAE-------KLREALQEALEALSGGEGGALDLLGQALRALERLAEY----DPSLAELAERL 270
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 487 EN---QVQE-EEDRRRMLEDVQSDKAtisraltqnrtlkdQLAELQngfvkvtnenmeltnAIQSELHvkkELARRMGEL 562
Cdd:COG0497 271 ESaliELEEaASELRRYLDSLEFDPE--------------RLEEVE---------------ERLALLR---RLARKYGVT 318
|
250 260 270 280
....*....|....*....|....*....|....*....|....*
gi 1698335943 563 QEELHNIKEQLEVKSQESQGLLAQREQLVAHLQQYSAGYQALASE 607
Cdd:COG0497 319 VEELLAYAEELRAELAELENSDERLEELEAELAEAEAELLEAAEK 363
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
205-595 |
2.92e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.81 E-value: 2.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 205 QYTQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNkelEKERDSLRLELFRLNNVSEETKQQNSEL 284
Cdd:PLN02939 45 QQKKKRGKNIAPKQRSSNSKLQSNTDENGQLENTSLRTVMELPQKSTSS---DDDHNRASMQRDEAIAAIDNEQQTNSKD 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 285 SEQIKlsneekgamKFEVEDLRKRLELAD---LMLQQCSSQsdptsATQQAQLLLEEKQQLEmHNHQLLESIGHLQKERD 361
Cdd:PLN02939 122 GEQLS---------DFQLEDLVGMIQNAEkniLLLNQARLQ-----ALEDLEKILTEKEALQ-GKINILEMRLSETDARI 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 362 RYAEQIQVEGRVWKDKTEQLLTQVAL-VAEERDQNISRVQELEAaiteLKSAAALLSQEREAQNKAEPQSSEPSERELAL 440
Cdd:PLN02939 187 KLAAQEKIHVEILEEQLEKLRNELLIrGATEGLCVHSLSKELDV----LKEENMLLKDDIQFLKAELIEVAETEERVFKL 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 441 EEVLNTLQqdkdavtaqfqAQLRDNEqlSRLCAEQETRLGELERRVENQVQEEEDRRRMLEDV--QSDKATIsrALTQNR 518
Cdd:PLN02939 263 EKERSLLD-----------ASLRELE--SKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRAtnQVEKAAL--VLDQNQ 327
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1698335943 519 TLKDQLAELQngfvkvtnENMELTNaiqselhVKKELARRMGELQEELHNIKEQLEVKSQESQGLLAQREQLVAHLQ 595
Cdd:PLN02939 328 DLRDKVDKLE--------ASLKEAN-------VSKFSSYKVELLQQKLKLLEERLQASDHEIHSYIQLYQESIKEFQ 389
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
118-665 |
3.43e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 41.49 E-value: 3.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 118 NERELETRNQELAAALDSSNLTNSQLNTKLDQLTQQTRGLTEQLQKERKEFEDKHSKEHG--AMREQLQVHIQTIGILVS 195
Cdd:TIGR00618 321 RSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHihTLQQQKTTLTQKLQSLCK 400
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 196 EKSELQtALQYTQQAarQKSAEAEELNNRLQSSKQRVSELERtlssvSTQQKQFEKHNKELEKERDSLRLELFRLNNVSE 275
Cdd:TIGR00618 401 ELDILQ-REQATIDT--RTSAFRDLQGQLAHAKKQQELQQRY-----AELCAAAITCTAQCEKLEKIHLQESAQSLKERE 472
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 276 ETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKRLELADLMLQQCSSQSD-PTSATQQAQLLLEEKQQLEMHNHQLLESIG 354
Cdd:TIGR00618 473 QQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDnPGPLTRRMQRGEQTYAQLETSEEDVYHQLT 552
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 355 HLQKERDRYAEQIQVEgRVWKDKTEQLLTQVALVAEERDQNISRVQELEAAITELKSAAALLSQE--REAQNKAEPQSSE 432
Cdd:TIGR00618 553 SERKQRASLKEQMQEI-QQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHAllRKLQPEQDLQDVR 631
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 433 PSERELALEEVLNTLQQDKDAVTAQFQAQlrdnEQLSRLCAEQETRLGElerRVENQVQEEEDRRRMLedvQSDKATISR 512
Cdd:TIGR00618 632 LHLQQCSQELALKLTALHALQLTLTQERV----REHALSIRVLPKELLA---SRQLALQKMQSEKEQL---TYWKEMLAQ 701
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 513 ALTQNRTLKDQLAELQNGFvkvtNENMELTNAIQSELHVKKELARRMgeLQEELHNIKEQLEVKSQESQGLLAQREQLVA 592
Cdd:TIGR00618 702 CQTLLRELETHIEEYDREF----NEIENASSSLGSDLAAREDALNQS--LKELMHQARTVLKARTEAHFNNNEEVTAALQ 775
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1698335943 593 HLQQYSAGYQALASEREQLHHQYLQQVQLMDRLHHDESQGRVELEISHSQLNQAQEQLELLVRDNEQLKSEVR 665
Cdd:TIGR00618 776 TGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEIT 848
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
390-732 |
3.47e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 41.59 E-value: 3.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 390 EERDQNISRVQELEAAITELKSAAALLSQEREAQNKAEPQSSEPSEREL-ALEEVLNTLQQDKDAVTAQFQAQLRDNEQL 468
Cdd:TIGR02169 177 EELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGyELLKEKEALERQKEAIERQLASLEEELEKL 256
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 469 SRLCAEQETRLGELERRVEnqvQEEEDRRRMLEDVQsdkatisraltqnRTLKDQLAElqngfvkVTNENMELTNAIQSE 548
Cdd:TIGR02169 257 TEEISELEKRLEEIEQLLE---ELNKKIKDLGEEEQ-------------LRVKEKIGE-------LEAEIASLERSIAEK 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 549 LHVKKELARRMGELQEELHNIKEQLEVKSQESQGLLAQREQLVAHLQQYSAGYQALASEREQLHhqylqqvqlmdrlhhd 628
Cdd:TIGR02169 314 ERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVD---------------- 377
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 629 esqgrVELEISHSQLNQAQEQLELLVRDNEQLKSEVRELLNSSALAsssldHGEGRESPQQEDSISASI--IIPEDFENQ 706
Cdd:TIGR02169 378 -----KEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRL-----SEELADLNAAIAGIEAKIneLEEEKEDKA 447
|
330 340
....*....|....*....|....*.
gi 1698335943 707 KEMEQfIRGALAQVEAERDEARRQLE 732
Cdd:TIGR02169 448 LEIKK-QEWKLEQLAADLSKYEQELY 472
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
232-524 |
3.54e-03 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 41.57 E-value: 3.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 232 VSELERTLSSVSTQQKQFEKHNKELEKERDSLRLEL------------------FRLNNVSEETKQQNSELSEQIKL--- 290
Cdd:TIGR00606 697 ISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLApgrqsiidlkekeipelrNKLQKVNRDIQRLKNDIEEQETLlgt 776
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 291 -SNEEKGAMKFE-----VEDLRKRLELADLMLQQCSSQSDPTSATQQAQLLLEEKQQLEMHNHQLLESIGHLQKERDRYA 364
Cdd:TIGR00606 777 iMPEEESAKVCLtdvtiMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQ 856
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 365 EQIQ-VEGRVWKDKTEQL-----LTQVALVAEERDQNISRVQELEAAITELKSAAALLSQ--EREAQNKAEPQSSEPSER 436
Cdd:TIGR00606 857 EQIQhLKSKTNELKSEKLqigtnLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETflEKDQQEKEELISSKETSN 936
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 437 ELALEEVLNTLQQDKDAVTAQFQAQLRDNEQLSRLCAEQETRLGELERRVEnqvQEEEDRRRMLEDVQSDKATISRALTQ 516
Cdd:TIGR00606 937 KKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQLE---ECEKHQEKINEDMRLMRQDIDTQKIQ 1013
|
....*...
gi 1698335943 517 NRTLKDQL 524
Cdd:TIGR00606 1014 ERWLQDNL 1021
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
197-450 |
3.56e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 41.44 E-value: 3.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 197 KSELQTALQYTQQAARQKSaEAEELNNRLQSSKQRVSELERTLSS-----VSTQQKQFEK-HNKELEKERDSLRLElfrL 270
Cdd:PRK11281 62 QQDLEQTLALLDKIDRQKE-ETEQLKQQLAQAPAKLRQAQAELEAlkddnDEETRETLSTlSLRQLESRLAQTLDQ---L 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 271 NNVSEETKQQNSELSEQIKLSNEEKGAMKFEVedlrKRLELADLMLQQCSSQSDPTSATQQAQLLLE--------EKQQL 342
Cdd:PRK11281 138 QNAQNDLAEYNSQLVSLQTQPERAQAALYANS----QRLQQIRNLLKGGKVGGKALRPSQRVLLQAEqallnaqnDLQRK 213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 343 EMHNHQLLESIGhlQKERDRYAEQIQVegrvwKDKTEQLLtQVALVAEERDQNISRVQELEAAITELKSAA-ALLSQERE 421
Cdd:PRK11281 214 SLEGNTQLQDLL--QKQRDYLTARIQR-----LEHQLQLL-QEAINSKRLTLSEKTVQEAQSQDEAARIQAnPLVAQELE 285
|
250 260
....*....|....*....|....*....
gi 1698335943 422 AQNKAepqssepSERELALEEVLNTLQQD 450
Cdd:PRK11281 286 INLQL-------SQRLLKATEKLNTLTQQ 307
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
275-513 |
3.75e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 3.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 275 EETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKRLELADLMLQQCSSQSDptSATQQAQLLLEEKQQLEMHNHQLLESig 354
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIR--ALEQELAALEAELAELEKEIAELRAE-- 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 355 hLQKERDRYAEQIQVEGRVWKDKTEQLLtqvaLVAEERDQNISRVQELEAAITELKSAAALLSQEREAQNkaepqsseps 434
Cdd:COG4942 99 -LEAQKEELAELLRALYRLGRQPPLALL----LSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELA---------- 163
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1698335943 435 ERELALEEVLNTLQQDKDAVTAQFQAQLRDNEQLSRLCAEQETRLGELERRVENQVQEEEDRRRMLEDVQSDKATISRA 513
Cdd:COG4942 164 ALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
323-590 |
3.77e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.16 E-value: 3.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 323 SDPTSATQQAQLLLEE--KQQLEMHNHQLLESIGHLQKERDRYAEQI-QVEGRVWKDKTEQLLTQVAlvaEERDQNISRV 399
Cdd:COG3206 145 PDPELAAAVANALAEAylEQNLELRREEARKALEFLEEQLPELRKELeEAEAALEEFRQKNGLVDLS---EEAKLLLQQL 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 400 QELEAAITELKSaaallsQEREAQNKAEPQSSEPSERELALEEVLNtlqqdkDAVTAQFQAQLRdneQLSRLCAEQETRL 479
Cdd:COG3206 222 SELESQLAEARA------ELAEAEARLAALRAQLGSGPDALPELLQ------SPVIQQLRAQLA---ELEAELAELSARY 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 480 GELERRVENQVQEEEDRRRMLEdvQSDKATISRALTQNRTLKDQLAELQNgfvkvtnenmeltnaiqsELHVKKELARRM 559
Cdd:COG3206 287 TPNHPDVIALRAQIAALRAQLQ--QEAQRILASLEAELEALQAREASLQA------------------QLAQLEARLAEL 346
|
250 260 270
....*....|....*....|....*....|.
gi 1698335943 560 GELQEELHNIKEQLEVKSQESQGLLAQREQL 590
Cdd:COG3206 347 PELEAELRRLEREVEVARELYESLLQRLEEA 377
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
118-310 |
3.81e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 3.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 118 NERELETRNQELAAALDSSNLTNSQ----------LNTKLDQLTQQTRGLTEQLQKERKEFEDKhSKEHGAMREQLQVHI 187
Cdd:COG4942 25 AEAELEQLQQEIAELEKELAALKKEekallkqlaaLERRIAALARRIRALEQELAALEAELAEL-EKEIAELRAELEAQK 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 188 QTIG--ILVSEKSELQTALQY--TQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKERDSL 263
Cdd:COG4942 104 EELAelLRALYRLGRQPPLALllSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAEL 183
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 1698335943 264 RLELFRLNNVSEETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKRLE 310
Cdd:COG4942 184 EEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIA 230
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
388-611 |
3.83e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.16 E-value: 3.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 388 VAEERDQNISRVQELEAAITELKsaAALLSQEREAQN-KAEPQSSEPSERELALEEVLNTLQQDKDAVtaqfQAQLRDNE 466
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELR--KELEEAEAALEEfRQKNGLVDLSEEAKLLLQQLSELESQLAEA----RAELAEAE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 467 QLSRLCAEQETRLGELERRVENQVQEEEDRRRmLEDVQSDKATISRALTQN----RTLKDQLAELQNgfvKVTNENMELT 542
Cdd:COG3206 240 ARLAALRAQLGSGPDALPELLQSPVIQQLRAQ-LAELEAELAELSARYTPNhpdvIALRAQIAALRA---QLQQEAQRIL 315
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1698335943 543 NAIQSELhvkKELARRMGELQEELhnikEQLEVKSQESQGLLAQREQLVAHLQQYSAGYQALASEREQL 611
Cdd:COG3206 316 ASLEAEL---EALQAREASLQAQL----AQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEA 377
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
129-343 |
4.31e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.52 E-value: 4.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 129 LAAALDSSNLTNSQLNTKLDQLTQQTRGLTEQLQKERKEfedkhskeHGAMREQLQVHIQTIGILVSEKSELQTALQYTQ 208
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKE--------EKALLKQLAALERRIAALARRIRALEQELAALE 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 209 QAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQ------------------QKQFEKHNKELEKERDSLRLELFRL 270
Cdd:COG4942 83 AELAELEKEIAELRAELEAQKEELAELLRALYRLGRQpplalllspedfldavrrLQYLKYLAPARREQAEELRADLAEL 162
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1698335943 271 NNVSEETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKRLEladlmlqqcSSQSDPTSATQQAQLLLEEKQQLE 343
Cdd:COG4942 163 AALRAELEAERAELEALLAELEEERAALEALKAERQKLLA---------RLEKELAELAAELAELQQEAEELE 226
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
395-825 |
4.50e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 40.91 E-value: 4.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 395 NISRVQELEAAITELKSAAALLSQEREAQNKAEPQSSEPSERELALEEVLNTLQQDKdavtaQFQAQLRDNEQLSRLCAE 474
Cdd:COG4717 69 NLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLL-----QLLPLYQELEALEAELAE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 475 QETRLGELERRVENQVQEEEDRRRmledvqsdkatisraltqnrtLKDQLAELQNgfvKVTNENMELTNAIQSELhvkKE 554
Cdd:COG4717 144 LPERLEELEERLEELRELEEELEE---------------------LEAELAELQE---ELEELLEQLSLATEEEL---QD 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 555 LARRMGELQEELHNIKEQLEVKSQESQGLLAQREQLVAHLQQysagyQALASEREQLHHQYLQQVQLMDRLHHDESQGRV 634
Cdd:COG4717 197 LAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEA-----AALEERLKEARLLLLIAAALLALLGLGGSLLSL 271
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 635 ELEISHSQLNQAQEQLELLVRDNEQLKSEVRELLNSSALASSSLDHGEGRESPQQEDSISASIIIPEDFENQKEMEQfIR 714
Cdd:COG4717 272 ILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEE-LQ 350
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 715 GALAQVEAERDEARRQLEEEHRLHLAARYQA------AVALRLEQQHQSHKADHDQHDHAHAHDQHAHCDHDHDHSEGGV 788
Cdd:COG4717 351 ELLREAEELEEELQLEELEQEIAALLAEAGVedeeelRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEEL 430
|
410 420 430
....*....|....*....|....*....|....*..
gi 1698335943 789 PVEVHQaLQVAMEKLQHRFTSLMQEKADLKERVEELE 825
Cdd:COG4717 431 EEELEE-LEEELEELEEELEELREELAELEAELEQLE 466
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
402-620 |
5.72e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 40.77 E-value: 5.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 402 LEAAITELKSAAALLSQE-REAQNKAEpqssepserelALEEVLNTLQQDKDAVTAQFQAQLRDNE--QLSRLCAEQETR 478
Cdd:COG3206 166 LELRREEARKALEFLEEQlPELRKELE-----------EAEAALEEFRQKNGLVDLSEEAKLLLQQlsELESQLAEARAE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 479 LGELERRVeNQVQEEEDRRRMLEDVQSDKATISRALTQNRTLKDQLAELQNGFvkvTNENMELTNAIQSELHVKKELARR 558
Cdd:COG3206 235 LAEAEARL-AALRAQLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSARY---TPNHPDVIALRAQIAALRAQLQQE 310
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1698335943 559 MGELQEELHNIKEQLEVKSQESQGLLAQREQLVAHLQQYSAGYQALASERE---QLHHQYLQQVQ 620
Cdd:COG3206 311 AQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEvarELYESLLQRLE 375
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
229-733 |
6.36e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 40.43 E-value: 6.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 229 KQRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRLELFRLnnvsEETKQQNSELSEQIKLSNEEKGAMKFEVEDLRKR 308
Cdd:PRK03918 192 EELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKEL----EELKEEIEELEKELESLEGSKRKLEEKIRELEER 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 309 LELADLMLQQCSSQsdpTSATQQAQLLLEEKQQLEMHNHQLLESIGHLQKERDRYAEQIQVEGRVWKDkTEQLLTQVALV 388
Cdd:PRK03918 268 IEELKKEIEELEEK---VKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKE-LEEKEERLEEL 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 389 AEERDQNISRVQELEAAITELKSAAALLSQEREAQNKAEPQSSEPSEREL-ALEEVLNTLQQDKDAVTAQfQAQLRdNEQ 467
Cdd:PRK03918 344 KKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELeELEKAKEEIEEEISKITAR-IGELK-KEI 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 468 LSRLCAEQETRLGELERRVENQVQEEEDRRRMLEDVqsdKATISRALTQNRTLKDQLAELQNGFVKVtnenmELTNAIQS 547
Cdd:PRK03918 422 KELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEY---TAELKRIEKELKEIEEKERKLRKELREL-----EKVLKKES 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 548 ELHVKKELARRMGELQEELHNI-KEQLEVKSQESQGLLAQREQLVAHLQqysagyqALASEREQLHHQYLQQVQLMDRLH 626
Cdd:PRK03918 494 ELIKLKELAEQLKELEEKLKKYnLEELEKKAEEYEKLKEKLIKLKGEIK-------SLKKELEKLEELKKKLAELEKKLD 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 627 HDESQgRVELEishsqlnqaQEQLELLVRDNEQLKSEVRELLNSSalasssldhgegRESPQQEDSISASIIIPEDFENQ 706
Cdd:PRK03918 567 ELEEE-LAELL---------KELEELGFESVEELEERLKELEPFY------------NEYLELKDAEKELEREEKELKKL 624
|
490 500
....*....|....*....|....*..
gi 1698335943 707 KEMEQFIRGALAQVEAERDEARRQLEE 733
Cdd:PRK03918 625 EEELDKAFEELAETEKRLEELRKELEE 651
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
252-577 |
8.21e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 40.21 E-value: 8.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 252 HNKELEKERDSLRLELfrlnnVSEETKQQnsELSEQIKLSNEEKGAMKFEVEDLRKRLELADLMLQQCSSQSDpTSATQQ 331
Cdd:pfam12128 598 SEEELRERLDKAEEAL-----QSAREKQA--AAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQ-SEKDKK 669
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 332 AQLLLEEKQQLEMHNHQLLESIGHLQKERDRYAEQIQVEGRvwKDKTEQLLTQVALVAEERDQNISRVQELEAAITELKS 411
Cdd:pfam12128 670 NKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKR--EARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKA 747
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 412 AAALLSQEREAQNKA---EPQSSEPSERELA-LEEVLNTLQQDKDAVTAQFQAQ----LRDNEQLSRLCAEQETRLGELE 483
Cdd:pfam12128 748 ELKALETWYKRDLASlgvDPDVIAKLKREIRtLERKIERIAVRRQEVLRYFDWYqetwLQRRPRLATQLSNIERAISELQ 827
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 484 RRVENQVQEEEDRRRMLE-DVQSDKATISRALTQNRTLKDQLAELQNGFVKVTNENMEL----TNAIQSELhvKKELARR 558
Cdd:pfam12128 828 QQLARLIADTKLRRAKLEmERKASEKQQVRLSENLRGLRCEMSKLATLKEDANSEQAQGsigeRLAQLEDL--KLKRDYL 905
|
330
....*....|....*....
gi 1698335943 559 MGELQEELHNIKEQLEVKS 577
Cdd:pfam12128 906 SESVKKYVEHFKNVIADHS 924
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
142-666 |
9.67e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 39.94 E-value: 9.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 142 QLNTKLDQLTQQTRGLTEQL---QKERKEFED------------KHSKEHGAMREQLQVHIQtigilvsekselQTALQY 206
Cdd:COG3096 445 AFRAKEQQATEEVLELEQKLsvaDAARRQFEKayelvckiagevERSQAWQTARELLRRYRS------------QQALAQ 512
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 207 TQQAARQKSAEAEELNNRLQSSKQRVSELERTLSSVSTQQKQFEKHNKELEKERDSLRLELFRLNNVSEETKQQNSELSE 286
Cdd:COG3096 513 RLQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRA 592
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 287 QIKlsneekgamkfeveDLRKR----LELADlMLQQCSSQS-----DPTSATQQAQLLLEEKQQLEMHNHQLLESIGHLQ 357
Cdd:COG3096 593 RIK--------------ELAARapawLAAQD-ALERLREQSgealaDSQEVTAAMQQLLEREREATVERDELAARKQALE 657
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 358 KErdryAEQIQVEGRVWKDKTEQLLTQVA--LVAEERD-----------------------QNISRVQELEAAITELKSA 412
Cdd:COG3096 658 SQ----IERLSQPGGAEDPRLLALAERLGgvLLSEIYDdvtledapyfsalygparhaivvPDLSAVKEQLAGLEDCPED 733
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 413 AALLSQEREAQNKAEPQSSE--------PSEREL--------------ALEEVLNTLQQDKDAVTAQFQAQLRDNEQLSR 470
Cdd:COG3096 734 LYLIEGDPDSFDDSVFDAEEledavvvkLSDRQWrysrfpevplfgraAREKRLEELRAERDELAEQYAKASFDVQKLQR 813
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 471 LCAEQETRLGElerrvENQVQEEEDRRRMLEDVQSDKATISRALTQNRtlkDQLAELQNGFVKVTnENMELTNAIQSELH 550
Cdd:COG3096 814 LHQAFSQFVGG-----HLAVAFAPDPEAELAALRQRRSELERELAQHR---AQEQQLRQQLDQLK-EQLQLLNKLLPQAN 884
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1698335943 551 VKKE--LARRMGELQEELHNIKE-QLEVKSQESQglLAQREQLVAHLQQYSAGYQALASEREQLHHQyLQQVQ------- 620
Cdd:COG3096 885 LLADetLADRLEELREELDAAQEaQAFIQQHGKA--LAQLEPLVAVLQSDPEQFEQLQADYLQAKEQ-QRRLKqqifals 961
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 1698335943 621 -LMDRLHHDESQGRVELEISHSQLNqaqEQLELLVRDNEQLKSEVRE 666
Cdd:COG3096 962 eVVQRRPHFSYEDAVGLLGENSDLN---EKLRARLEQAEEARREARE 1005
|
|
| |
