|
Name |
Accession |
Description |
Interval |
E-value |
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
217-281 |
8.24e-34 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 124.82 E-value: 8.24e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024359610 217 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPRYGLFAPVHKV 281
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
61-125 |
5.33e-31 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 116.73 E-value: 5.33e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024359610 61 VGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLRGIFTRPSKL 125
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
217-282 |
2.66e-27 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 106.52 E-value: 2.66e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359610 217 IGDRVLVGGT-KAGVVRFLGETDFAKGEWCGVELDEPL-GKNDGAVAGTRYFQCQPRYGLFAPVHKVT 282
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPLrGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
61-126 |
2.93e-27 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 106.13 E-value: 2.93e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359610 61 VGERVWVNGN-KPGFIQFLGETQFAPGQWAGIVLDEP-IGKNDGSVAGVRYFQCEPLRGIFTRPSKLS 126
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPlRGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
705-1529 |
2.12e-24 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 112.46 E-value: 2.12e-24
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 705 EEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQ-------------------EAEIKVKELDVLQAKCNEQTKLIGSLTQ 765
Cdd:TIGR02168 175 KETERKLERTRENLDRLEDI-LNELERQLKSLErqaekaerykelkaelrelELALLVLRLEELREELEELQEELKEAEE 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 766 QIRASEEKL----LDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTK-------ELQGKEQKLL 834
Cdd:TIGR02168 254 ELEELTAELqeleEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERqleeleaQLEELESKLD 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 835 DLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKERE 914
Cdd:TIGR02168 334 ELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLE 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 915 EREQQLTE-----AKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAE- 988
Cdd:TIGR02168 414 DRRERLQQeieelLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDs 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 989 -QSQQETLKTHQEELKkmqdQLTDMKKQMETSQNQYKDL---QAKYEKETsemitkhDADIKGFKQNLL--DAEEALKA- 1061
Cdd:TIGR02168 494 lERLQENLEGFSEGVK----ALLKNQSGLSGILGVLSELisvDEGYEAAI-------EAALGGRLQAVVveNLNAAKKAi 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1062 -AQKKND---------------ELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEK 1125
Cdd:TIGR02168 563 aFLKQNElgrvtflpldsikgtEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLR 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1126 E----------------SLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKS 1189
Cdd:TIGR02168 643 PgyrivtldgdlvrpggVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELE 722
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1190 KLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAvdvacqkhikEREELEHYQKLLEENDRVIKDKDDVIQ 1269
Cdd:TIGR02168 723 ELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEE----------LEERLEEAEEELAEAEAEIEELEAQIE 792
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1270 RLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTA 1349
Cdd:TIGR02168 793 QLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELE 872
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1350 NENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHL------LQEALFASEQRL 1423
Cdd:TIGR02168 873 SELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLevridnLQERLSEEYSLT 952
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1424 LAEREELVNENKAVTEKLTKATADAvlaetafTEKINEL---NLEKESvfskslQFEKHNEallrEKDELERKYSELLDE 1500
Cdd:TIGR02168 953 LEEAEALENKIEDDEEEARRRLKRL-------ENKIKELgpvNLAAIE------EYEELKE----RYDFLTAQKEDLTEA 1015
|
890 900
....*....|....*....|....*....
gi 2024359610 1501 KKSLENAFSDMKREQELDFSAKRLLVQEN 1529
Cdd:TIGR02168 1016 KETLEEAIEEIDREARERFKDTFDQVNEN 1044
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
830-1711 |
5.94e-22 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 104.37 E-value: 5.94e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 830 EQKLLDLEKNLSAVNQVKDSLEKELQLLKEKftsavdgAENAQRamqetinklnqkeeqFALMSSELEQLKSNLTVMEtk 909
Cdd:TIGR02168 178 ERKLERTRENLDRLEDILNELERQLKSLERQ-------AEKAER---------------YKELKAELRELELALLVLR-- 233
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 910 LKEREEREQQLTEAKVKLENDIAEImkssgdssaqlmkmNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKaeq 989
Cdd:TIGR02168 234 LEELREELEELQEELKEAEEELEEL--------------TAELQELEEKLEELRLEVSELEEEIEELQKELYALANE--- 296
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 990 sqQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMitkhDADIKGFKQNLLDAEEALKAAQKKNDEL 1069
Cdd:TIGR02168 297 --ISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAEL----EEKLEELKEELESLEAELEELEAELEEL 370
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1070 ETQAEELKKQAEQAKS----LSSVLASARKEIELMSDKMRDLISEKETLAQERNTlkLEKESLLSQHLEMESKILLVQQD 1145
Cdd:TIGR02168 371 ESRLEELEEQLETLRSkvaqLELQIASLNNEIERLEARLERLEDRRERLQQEIEE--LLKKLEEAELKELQAELEELEEE 448
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1146 REELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKS---KLLSEIETAQADLLKITQENDALRSSESTLLQQ 1222
Cdd:TIGR02168 449 LEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDsleRLQENLEGFSEGVKALLKNQSGLSGILGVLSEL 528
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1223 LKELQANKDAVDVACQKHIkereelehyQKLLEENDRVIKD-----KDDVIQRL------QSSYDDLARNQRELLQEVsi 1291
Cdd:TIGR02168 529 ISVDEGYEAAIEAALGGRL---------QAVVVENLNAAKKaiaflKQNELGRVtflpldSIKGTEIQGNDREILKNI-- 597
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1292 ltaerDSAQEKDLDLKSTHIALKNEIDCLLQTNR---SLQSEKEMLLKSR-EELCVSLANT-------------ANENQA 1354
Cdd:TIGR02168 598 -----EGFLGVAKDLVKFDPKLRKALSYLLGGVLvvdDLDNALELAKKLRpGYRIVTLDGDlvrpggvitggsaKTNSSI 672
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1355 LKLRKdemqtELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKssreasnsEKIHLLQEALFASEQRLLAEREELVNEN 1434
Cdd:TIGR02168 673 LERRR-----EIEELEEKIEELEEKIAELEKALAELRKELEELE--------EELEQLRKELEELSRQISALRKDLARLE 739
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1435 KAVtEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKRE 1514
Cdd:TIGR02168 740 AEV-EQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEE 818
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1515 QELDFSAKRLLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNT 1594
Cdd:TIGR02168 819 AANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEE 898
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1595 CSSDIEILNRERTELQDKCQKLTGEVENMKENLTV------EKKARILDKESFLLERM-ELQNNIGF----LEKEVEEMR 1663
Cdd:TIGR02168 899 LSEELRELESKRSELRRELEELREKLAQLELRLEGlevridNLQERLSEEYSLTLEEAeALENKIEDdeeeARRRLKRLE 978
|
890 900 910 920
....*....|....*....|....*....|....*....|....*...
gi 2024359610 1664 EKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQL 1711
Cdd:TIGR02168 979 NKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEI 1026
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
403-1281 |
1.91e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 96.28 E-value: 1.91e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 403 HVLEMEAKMDQLRAMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESitkgdlERKRQISEDPENTQtklehARIKELE 482
Cdd:TIGR02168 233 RLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELE------EEIEELQKELYALA-----NEISRLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 483 QSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLEsskhiddvdtslSLLQEISSLQEKMAA 562
Cdd:TIGR02168 302 QQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELE------------SLEAELEELEAELEE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 563 AgKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDhankensdvielwksKLESAIASHQQAMEEL 642
Cdd:TIGR02168 370 L-ESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRE---------------RLQQEIEELLKKLEEA 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 643 KVSfnkgvgAQTAEFAELKTQMEKVKLDYENEMSNLKLKQEneksqhlkEIEALKAKLLEvTEEKEQTLENLKAKLESVE 722
Cdd:TIGR02168 434 ELK------ELQAELEELEEELEELQEELERLEEALEELRE--------ELEEAEQALDA-AERELAQLQARLDSLERLQ 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 723 DQHLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTK--------LIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKL 794
Cdd:TIGR02168 499 ENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGyeaaieaaLGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPL 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 795 SeqlQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEK------FT------ 862
Cdd:TIGR02168 579 D---SIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLrpgyriVTldgdlv 655
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 863 ----SAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLkereereQQLTEAKVKLENDIAEIMKSS 938
Cdd:TIGR02168 656 rpggVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKEL-------EELEEELEQLRKELEELSRQI 728
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 939 GDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTaqkaeqsqQETLKTHQEELKKMQDQLTDMKKQMET 1018
Cdd:TIGR02168 729 SALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEA--------EEELAEAEAEIEELEAQIEQLKEELKA 800
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1019 SQNQYKDLQAKYEKEtsemitkhdadikgfKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAK----SLSSVLASAR 1094
Cdd:TIGR02168 801 LREALDELRAELTLL---------------NEEAANLRERLESLERRIAATERRLEDLEEQIEELSedieSLAAEIEELE 865
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1095 KEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNsENKKILKQKEA--AEA 1172
Cdd:TIGR02168 866 ELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLE-LRLEGLEVRIDnlQER 944
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1173 KSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDvacqkhiKEREELEHYQK 1252
Cdd:TIGR02168 945 LSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLT-------AQKEDLTEAKE 1017
|
890 900 910
....*....|....*....|....*....|
gi 2024359610 1253 LLEEndrVIKDKDDVI-QRLQSSYDDLARN 1281
Cdd:TIGR02168 1018 TLEE---AIEEIDREArERFKDTFDQVNEN 1044
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1355-2064 |
1.04e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 93.58 E-value: 1.04e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1355 LKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSnfleemkssREASNSEKIHLLQEALFASEQRLLA--------E 1426
Cdd:TIGR02168 170 YKERRKETERKLERTRENLDRLEDILNELERQLKSLE---------RQAEKAERYKELKAELRELELALLVlrleelreE 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1427 REELVNENKAVTEKLTKATADAVLAEtaftEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLEN 1506
Cdd:TIGR02168 241 LEELQEELKEAEEELEELTAELQELE----EKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLER 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1507 AFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQ 1586
Cdd:TIGR02168 317 QLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIA 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1587 VLSSSFNTCSSDIEILNRERTELQdkcQKLTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKN 1666
Cdd:TIGR02168 397 SLNNEIERLEARLERLEDRRERLQ---QEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEA 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1667 KEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVT 1746
Cdd:TIGR02168 474 EQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVVVE 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1747 EKEK----MELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQTDADFS-------CRLLV------ 1809
Cdd:TIGR02168 554 NLNAakkaIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRkalsyllGGVLVvddldn 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1810 -------------------------------SEGKHELLLE---EMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQT 1855
Cdd:TIGR02168 634 alelakklrpgyrivtldgdlvrpggvitggSAKTNSSILErrrEIEELEEKIEELEEKIAELEKALAELRKELEELEEE 713
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1856 MEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQ 1935
Cdd:TIGR02168 714 LEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQ 793
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1936 KSQQLAALQEENVKLAEELGRSRDEVtshQKLEEERSVLNNQLLEMKKRESTLKKEID---EERASLQKSISDTSALITQ 2012
Cdd:TIGR02168 794 LKEELKALREALDELRAELTLLNEEA---ANLRERLESLERRIAATERRLEDLEEQIEelsEDIESLAAEIEELEELIEE 870
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359610 2013 KDEELEKLRNEITVLRGENASAK----TLQSVVKTLESDKLKLEEKVKNLEQKLKA 2064
Cdd:TIGR02168 871 LESELEALLNERASLEEALALLRseleELSEELRELESKRSELRRELEELREKLAQ 926
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
358-1055 |
1.14e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 90.12 E-value: 1.14e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 358 LKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHdrhvLEMEAKMDQLRAMVEAADREKVELLNQLEEEKR 437
Cdd:TIGR02168 234 LEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEV----SELEEEIEELQKELYALANEISRLEQQKQILRE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 438 KVEDLQFRVEEESITKGDLERKRQISEDPENTQTKlehaRIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELE 517
Cdd:TIGR02168 310 RLANLERQLEELEAQLEELESKLDELAEELAELEE----KLEELKEELESLEAELEELEAELEELESRLEELEEQLETLR 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 518 RDLALRVKEVAELRGRLES-SKHIDDVDTSLS-LLQEISSLQEKMAAAGK--------EHQREMSSLKEKFESSEEALRK 587
Cdd:TIGR02168 386 SKVAQLELQIASLNNEIERlEARLERLEDRRErLQQEIEELLKKLEEAELkelqaeleELEEELEELQEELERLEEALEE 465
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 588 ----------EIKTLSASNERMGKENESLKTKLDHANKENSDVIELWKSK-----------------------LESAIAS 634
Cdd:TIGR02168 466 lreeleeaeqALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQsglsgilgvlselisvdegyeaaIEAALGG 545
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 635 HQQAME-------ELKVSFNKGVGAQTAEFAELKTqmekVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKL------- 700
Cdd:TIGR02168 546 RLQAVVvenlnaaKKAIAFLKQNELGRVTFLPLDS----IKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLrkalsyl 621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 701 ---LEVTEEKEQTLENLKAKLES----VEDQHLV----------------------EMEDTLNKLQEAEIKVKELDV-LQ 750
Cdd:TIGR02168 622 lggVLVVDDLDNALELAKKLRPGyrivTLDGDLVrpggvitggsaktnssilerrrEIEELEEKIEELEEKIAELEKaLA 701
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 751 AKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKE 830
Cdd:TIGR02168 702 ELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAE 781
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 831 QKLLDLEK-------NLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNL 903
Cdd:TIGR02168 782 AEIEELEAqieqlkeELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEI 861
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 904 TVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQT 983
Cdd:TIGR02168 862 EELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNL 941
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 984 AQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDL---------QAKYEKETSEMITKHDADIKGFKQNLLD 1054
Cdd:TIGR02168 942 QERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELgpvnlaaieEYEELKERYDFLTAQKEDLTEAKETLEE 1021
|
.
gi 2024359610 1055 A 1055
Cdd:TIGR02168 1022 A 1022
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
908-1705 |
1.79e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 89.73 E-value: 1.79e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 908 TKLKER-EEREQQLTEAKVKLE--NDIAEIMKSSGDS-SAQLMKMNDELRLKErQLEQIQLELTKAneKAVQLQKNVEQT 983
Cdd:TIGR02168 168 SKYKERrKETERKLERTRENLDrlEDILNELERQLKSlERQAEKAERYKELKA-ELRELELALLVL--RLEELREELEEL 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 984 AQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSE------MITKHDADIKGFKQNLLDAEE 1057
Cdd:TIGR02168 245 QEELKEAEEE-LEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEisrleqQKQILRERLANLERQLEELEA 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1058 ALKAAQKKNDELETQAEELKKQAEQAK----SLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHL 1133
Cdd:TIGR02168 324 QLEELESKLDELAEELAELEEKLEELKeeleSLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1134 EMESKILLVQQDREELWTKNEELNsenkkilkqKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALR 1213
Cdd:TIGR02168 404 RLEARLERLEDRRERLQQEIEELL---------KKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAE 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1214 SSESTLLQQLKELQANKDAVDVACQKHIKERE---ELEHYQKLLEENDRVIKDKDDVIQR--------LQSSYDDLA-RN 1281
Cdd:TIGR02168 475 QALDAAERELAQLQARLDSLERLQENLEGFSEgvkALLKNQSGLSGILGVLSELISVDEGyeaaieaaLGGRLQAVVvEN 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1282 QRELLQEVSILTAERDS-------AQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQA 1354
Cdd:TIGR02168 555 LNAAKKAIAFLKQNELGrvtflplDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNA 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1355 LKLRKdEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREasNSEKIHLLQEALFASEQRLLAEREELvnen 1434
Cdd:TIGR02168 635 LELAK-KLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILERRREIEE--LEEKIEELEEKIAELEKALAELRKEL---- 707
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1435 kavtEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKRE 1514
Cdd:TIGR02168 708 ----EELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAE 783
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1515 QEldfsakrllvqentTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNT 1594
Cdd:TIGR02168 784 IE--------------ELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEE 849
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1595 CSSDIEILNRERTELQDKCQKLTGEVenmkENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKE 1674
Cdd:TIGR02168 850 LSEDIESLAAEIEELEELIEELESEL----EALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLA 925
|
810 820 830
....*....|....*....|....*....|.
gi 2024359610 1675 LLVQEKEKSETKLEEVIKEKMILYKETEQLA 1705
Cdd:TIGR02168 926 QLELRLEGLEVRIDNLQERLSEEYSLTLEEA 956
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
951-1845 |
2.32e-17 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 89.36 E-value: 2.32e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 951 ELRLKERQLEQIQLELTKANEKAVQLQKNVEqtaqKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKY 1030
Cdd:TIGR02169 178 ELEEVEENIERLDLIIDEKRQQLERLRRERE----KAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEEL 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1031 EKETSEmitkhdadikgfkqnlldAEEALKAAQKKNDELETQAEELKKQAE-QAKSLSSVLASARKEIELMSDKMRDLIS 1109
Cdd:TIGR02169 254 EKLTEE------------------ISELEKRLEEIEQLLEELNKKIKDLGEeEQLRVKEKIGELEAEIASLERSIAEKER 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1110 EKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKS 1189
Cdd:TIGR02169 316 ELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1190 KLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELEhyqKLLEENDRVIKDKDDVIQ 1269
Cdd:TIGR02169 396 KLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQE---WKLEQLAADLSKYEQELY 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1270 RLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSRE-ELCVSLANT 1348
Cdd:TIGR02169 473 DLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEvAAGNRLNNV 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1349 ANENQA--------LKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASE 1420
Cdd:TIGR02169 553 VVEDDAvakeaielLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDIEAA 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1421 QRLLAERE------ELVNENKAVTEKLTKATADAVLAeTAFTEKINELNLEKESVfskslqfEKHNEALLREKDELERKY 1494
Cdd:TIGR02169 633 RRLMGKYRmvtlegELFEKSGAMTGGSRAPRGGILFS-RSEPAELQRLRERLEGL-------KRELSSLQSELRRIENRL 704
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1495 SELLDEKKSLENAFSDMKREQELdfsakrlLVQENTTLKYSIEALEEELKKKNlenQELIACRSDLSDLLKEAQDARRTL 1574
Cdd:TIGR02169 705 DELSQELSDASRKIGEIEKEIEQ-------LEQEEEKLKERLEELEEDLSSLE---QEIENVKSELKELEARIEELEEDL 774
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1575 ENELAAVSHAKQVLSSSFntcssdIEILNRERTELQDKCQKLTGEVENMKenltvekkaRILDKESFLLErmelqnnigF 1654
Cdd:TIGR02169 775 HKLEEALNDLEARLSHSR------IPEIQAELSKLEEEVSRIEARLREIE---------QKLNRLTLEKE---------Y 830
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1655 LEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSV 1734
Cdd:TIGR02169 831 LEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEA 910
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1735 MLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINEEIL------KEKEKLSKEYYKLhEKVVALLEQTDADFSCRLL 1808
Cdd:TIGR02169 911 QIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELsledvqAELQRVEEEIRAL-EPVNMLAIQEYEEVLKRLD 989
|
890 900 910
....*....|....*....|....*....|....*..
gi 2024359610 1809 VSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEA 1845
Cdd:TIGR02169 990 ELKEKRAKLEEERKAILERIEEYEKKKREVFMEAFEA 1026
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
416-1301 |
5.77e-17 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 87.82 E-value: 5.77e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 416 AMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEDPENTQTKLEharikELEQSLLFEKTKADKL 495
Cdd:TIGR02169 163 AGVAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKR-----EYEGYELLKEKEALER 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 496 QRELEDTRVATVSEKsrIMELERDLALRVKEVAELRGRLEsskhiddvdtslSLLQEISSLQEKMAAAGKEHQREMSSLK 575
Cdd:TIGR02169 238 QKEAIERQLASLEEE--LEKLTEEISELEKRLEEIEQLLE------------ELNKKIKDLGEEEQLRVKEKIGELEAEI 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 576 EKFESSEEALRKEIKtlSASNERMGKENESLKTKLDHANKENSdvIELWKSKLESAIASHQQAMEELKVSFNKgVGAQTA 655
Cdd:TIGR02169 304 ASLERSIAEKERELE--DAEERLAKLEAEIDKLLAEIEELERE--IEEERKRRDKLTEEYAELKEELEDLRAE-LEEVDK 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 656 EFAELKtqmEKVKlDYENEMSNLKLKQEneksqhlkEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHlvemedtlNK 735
Cdd:TIGR02169 379 EFAETR---DELK-DYREKLEKLKREIN--------ELKRELDRLQEELQRLSEELADLNAAIAGIEAKI--------NE 438
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 736 LQEaeikvkELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEgklEIQKLSEQLQAAEKQIQNLETEKVGG 815
Cdd:TIGR02169 439 LEE------EKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEK---ELSKLQRELAEAEAQARASEERVRGG 509
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 816 SSKVSNLTKELQG-----------KEQKLLDLE----KNLSAVNQVKDSLEKE-LQLLKEKftsavdgaeNAQRAMQETI 879
Cdd:TIGR02169 510 RAVEEVLKASIQGvhgtvaqlgsvGERYATAIEvaagNRLNNVVVEDDAVAKEaIELLKRR---------KAGRATFLPL 580
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 880 NKLNQKEEQ-----------FALMSSELEQLKSNLTVM---ETKLKEREE--REQQLTEAKVKLENDIAEIMKS-SGDSS 942
Cdd:TIGR02169 581 NKMRDERRDlsilsedgvigFAVDLVEFDPKYEPAFKYvfgDTLVVEDIEaaRRLMGKYRMVTLEGELFEKSGAmTGGSR 660
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 943 AQLMKMNDELRLKErQLEQIQLELtkanekavqlqknveQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQ 1022
Cdd:TIGR02169 661 APRGGILFSRSEPA-ELQRLRERL---------------EGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKE 724
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1023 YKDLQAKYEKEtSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAE--QAKSLSSVLASARKEIELM 1100
Cdd:TIGR02169 725 IEQLEQEEEKL-KERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNdlEARLSHSRIPEIQAELSKL 803
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1101 SDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTE 1180
Cdd:TIGR02169 804 EEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESR 883
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1181 KVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRV 1260
Cdd:TIGR02169 884 LGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRV 963
|
890 900 910 920
....*....|....*....|....*....|....*....|....
gi 2024359610 1261 ---IKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQE 1301
Cdd:TIGR02169 964 eeeIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILE 1007
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1068-1922 |
5.80e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 87.80 E-value: 5.80e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1068 ELETQAEELKKQAEQA---KSLSSVLASARKEIELMS-----DKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKI 1139
Cdd:TIGR02168 197 ELERQLKSLERQAEKAeryKELKAELRELELALLVLRleelrEELEELQEELKEAEEELEELTAELQELEEKLEELRLEV 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1140 LLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQestekvalisekskLLSEIETAQADLLKITQENDALRSSESTL 1219
Cdd:TIGR02168 277 SELEEEIEELQKELYALANEISRLEQQKQILRERLAN--------------LERQLEELEAQLEELESKLDELAEELAEL 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1220 LQQLKELQANKDAvdvacqkhikEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLaRNQRELLQevsiltaerdsa 1299
Cdd:TIGR02168 343 EEKLEELKEELES----------LEAELEELEAELEELESRLEELEEQLETLRSKVAQL-ELQIASLN------------ 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1300 qekdldlksthialkNEIDCLLQTNRSLQSEKEMLLKSREELcvslantanENQALKLRKDEMQTELETEREKLEKMTKD 1379
Cdd:TIGR02168 400 ---------------NEIERLEARLERLEDRRERLQQEIEEL---------LKKLEEAELKELQAELEELEEELEELQEE 455
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1380 NMDLKASLSSLSNFLEEMKSSREASNSEKIHLlqEALFASEQRLLAEREELVNENKAVT-EKLTKATADAVLAETAFTEk 1458
Cdd:TIGR02168 456 LERLEEALEELREELEEAEQALDAAERELAQL--QARLDSLERLQENLEGFSEGVKALLkNQSGLSGILGVLSELISVD- 532
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1459 iNELNLEKESVFSKSLQfekhneALLREKDELERKYSELLDEKKSLENAFS--DMKREQELDFSAKRLLVQENTTLKYSI 1536
Cdd:TIGR02168 533 -EGYEAAIEAALGGRLQ------AVVVENLNAAKKAIAFLKQNELGRVTFLplDSIKGTEIQGNDREILKNIEGFLGVAK 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1537 EALEEELKKKNLENQELIACRsdLSDLLKEAQDARRTLENELAAVSHAKQVLSSSF-------NTCSSD------IEILN 1603
Cdd:TIGR02168 606 DLVKFDPKLRKALSYLLGGVL--VVDDLDNALELAKKLRPGYRIVTLDGDLVRPGGvitggsaKTNSSIlerrreIEELE 683
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1604 RERTELQDKCQKLTGEVENMKENLT-VEKKARILDKESFLLERM--ELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEK 1680
Cdd:TIGR02168 684 EKIEELEEKIAELEKALAELRKELEeLEEELEQLRKELEELSRQisALRKDLARLEAEVEQLEERIAQLSKELTELEAEI 763
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1681 EKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESL 1760
Cdd:TIGR02168 764 EELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDL 843
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1761 HAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQTDAdfscrllvSEGKHELLLEEMSNLALKLREIERlqaqtfm 1840
Cdd:TIGR02168 844 EEQIEELSEDIESLAAEIEELEELIEELESELEALLNERAS--------LEEALALLRSELEELSEELRELES------- 908
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1841 QKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLensrqtNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVE 1920
Cdd:TIGR02168 909 KRSELRRELEELREKLAQLELRLEGLEVRIDNLQERL------SEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIK 982
|
..
gi 2024359610 1921 EL 1922
Cdd:TIGR02168 983 EL 984
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
851-1701 |
1.37e-16 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 86.56 E-value: 1.37e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 851 EKELQLLKEKFTSAVDGAENAQRAMQETINKLN-QKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLEN 929
Cdd:pfam02463 169 RKKKEALKKLIEETENLAELIIDLEELKLQELKlKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRD 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 930 DIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQ--TAQKAEQSQQETLKTHQEELKKMQD 1007
Cdd:pfam02463 249 EQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSEllKLERRKVDDEEKLKESEKEKKKAEK 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1008 QLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLS 1087
Cdd:pfam02463 329 ELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQ 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1088 SVLASARKEIELMSDKMRDLISEKETLaQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQK 1167
Cdd:pfam02463 409 LLLELARQLEDLLKEEKKEELEILEEE-EESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLE 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1168 EAAEAKSRQESTEKvaliSEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREEL 1247
Cdd:pfam02463 488 LLLSRQKLEERSQK----ESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEER 563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1248 EHYQKLLEENDR-------VIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCL 1320
Cdd:pfam02463 564 QKLVRALTELPLgarklrlLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKA 643
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1321 LQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSS 1400
Cdd:pfam02463 644 KESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELL 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1401 REASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHN 1480
Cdd:pfam02463 724 ADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEEL 803
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1481 EALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELKKKNLENQ-ELIACRSD 1559
Cdd:pfam02463 804 RALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLkEEELEEQK 883
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1560 LSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTVEKKARILDKE 1639
Cdd:pfam02463 884 LKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNK 963
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024359610 1640 SFLLERMELQNNigfLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKET 1701
Cdd:pfam02463 964 RLLLAKEELGKV---NLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQRLKEF 1022
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1192-2120 |
1.43e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 86.65 E-value: 1.43e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1192 LSEIETAQADLLKItqeNDALRSSEStllqQLKELQANKDAVdvacQKHIKEREELEHYQKLL-----EENDRVIKDKDD 1266
Cdd:TIGR02168 178 ERKLERTRENLDRL---EDILNELER----QLKSLERQAEKA----ERYKELKAELRELELALlvlrlEELREELEELQE 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1267 VIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLA 1346
Cdd:TIGR02168 247 ELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLE 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1347 NTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKI-HLLQEALFASEQRLLA 1425
Cdd:TIGR02168 327 ELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAqLELQIASLNNEIERLE 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1426 EREELVNENKAVTEKlTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLE 1505
Cdd:TIGR02168 407 ARLERLEDRRERLQQ-EIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELA 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1506 NAFS------DMKREQELDFSAKRLLVQENTTLKYSIEALEEELK-KKNLENQELIACRSDLSDLLKEaqdarrTLENEL 1578
Cdd:TIGR02168 486 QLQArldsleRLQENLEGFSEGVKALLKNQSGLSGILGVLSELISvDEGYEAAIEAALGGRLQAVVVE------NLNAAK 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1579 AAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTVEKKARILdkESFLLERM----ELQNNIGF 1654
Cdd:TIGR02168 560 KAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKA--LSYLLGGVlvvdDLDNALEL 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1655 LEKEVEEMR--EKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCV 1732
Cdd:TIGR02168 638 AKKLRPGYRivTLDGDLVRPGGVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQL 717
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1733 SVMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEqtdadfscrllvseg 1812
Cdd:TIGR02168 718 RKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEA--------------- 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1813 khellleemsnlalklrEIERLQAQtfmqkfeadkrAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELD 1892
Cdd:TIGR02168 783 -----------------EIEELEAQ-----------IEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIA 834
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1893 MLKQNNlkneEELTKSKELLNLEnkkVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELgrsrdevtshQKLEEERS 1972
Cdd:TIGR02168 835 ATERRL----EDLEEQIEELSED---IESLAAEIEELEELIEELESELEALLNERASLEEAL----------ALLRSELE 897
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1973 VLNNQLLEMKKRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEitvlrgENASAKTLQSVVKTLESDKLKLE 2052
Cdd:TIGR02168 898 ELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEE------YSLTLEEAEALENKIEDDEEEAR 971
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359610 2053 EKVKNLEQKLKAkseqpltvtspSGDIaaNLLQDESAEDKQQEIDFLNSVIVDLQRRNEELNLKIQRM 2120
Cdd:TIGR02168 972 RRLKRLENKIKE-----------LGPV--NLAAIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEI 1026
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1067-1711 |
1.77e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 86.14 E-value: 1.77e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1067 DELETQAEELKKQAEQA---KSLSSVLAsaRKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQ 1143
Cdd:COG1196 196 GELERQLEPLERQAEKAeryRELKEELK--ELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1144 QDREELwtkNEELNsenkkilkqkeaaeaksrqestekvALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQL 1223
Cdd:COG1196 274 LELEEL---ELELE-------------------------EAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEEL 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1224 KELQankdavdvacQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKD 1303
Cdd:COG1196 326 AELE----------EELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAA 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1304 LDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDL 1383
Cdd:COG1196 396 AELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALL 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1384 KASLSSLSNFLEEMKSSREASNSEkihLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELN 1463
Cdd:COG1196 476 EAALAELLEELAEAAARLLLLLEA---EADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIV 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1464 LEKESVFSKSLQFEKHNEA--LLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEALEE 1541
Cdd:COG1196 553 VEDDEVAAAAIEYLKAAKAgrATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARL 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1542 ELKKKnlenqeliacrsdlsdLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVE 1621
Cdd:COG1196 633 EAALR----------------RAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELE 696
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1622 NMKENLTVEKKARILDKEsfllERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEkmiLYKET 1701
Cdd:COG1196 697 EALLAEEEEERELAEAEE----ERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEE---LEREL 769
|
650
....*....|
gi 2024359610 1702 EQLASKIEQL 1711
Cdd:COG1196 770 ERLEREIEAL 779
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1038-1931 |
6.15e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 84.73 E-value: 6.15e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1038 ITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAkslssvlasarkeielmsDKMRDLISEKEtlaqe 1117
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKA------------------ERYQALLKEKR----- 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1118 rntlKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEkskllsEIET 1197
Cdd:TIGR02169 222 ----EYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEE------EQLR 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1198 AQADLLKITQENDALRSSESTLLQQLKELQAnkdavdvacqKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDD 1277
Cdd:TIGR02169 292 VKEKIGELEAEIASLERSIAEKERELEDAEE----------RLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAE 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1278 LARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKL 1357
Cdd:TIGR02169 362 LKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEE 441
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1358 RKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMkssreasnSEKIHLLQEALFASEQRLLAEREElVNENKAV 1437
Cdd:TIGR02169 442 EKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRV--------EKELSKLQRELAEAEAQARASEER-VRGGRAV 512
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1438 TE--------------KLTKATADAVLA-ETAFTEKINELNLEKESVFSKSLQFEKHNEA-----LLREKDELERKYSEL 1497
Cdd:TIGR02169 513 EEvlkasiqgvhgtvaQLGSVGERYATAiEVAAGNRLNNVVVEDDAVAKEAIELLKRRKAgratfLPLNKMRDERRDLSI 592
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1498 LDEKKSLENAFSDMKREQEldFSAKRLLVQENTTLKYSIEAleeelKKKNLENQELIACRSDL----------SDLLKEA 1567
Cdd:TIGR02169 593 LSEDGVIGFAVDLVEFDPK--YEPAFKYVFGDTLVVEDIEA-----ARRLMGKYRMVTLEGELfeksgamtggSRAPRGG 665
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1568 QDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTvekkaRILDKESFLLERME 1647
Cdd:TIGR02169 666 ILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIE-----QLEQEEEKLKERLE 740
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1648 -LQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVikEKMILYKETEQLASKIEQLKSDFTSLSVSKAELE 1726
Cdd:TIGR02169 741 eLEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDL--EARLSHSRIPEIQAELSKLEEEVSRIEARLREIE 818
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1727 dvhscvsVMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALleqtdadfscr 1806
Cdd:TIGR02169 819 -------QKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDL----------- 880
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1807 llvsEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIH------QEKIETLASLENS 1880
Cdd:TIGR02169 881 ----ESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEdpkgedEEIPEEELSLEDV 956
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|.
gi 2024359610 1881 RQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKL 1931
Cdd:TIGR02169 957 QAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILE 1007
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
730-1379 |
8.22e-16 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 84.22 E-value: 8.22e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 730 EDTLNKLQEAEikvKELDVLQAKCNEQTKLIGSLTQQIRA--------SEEKLLDLAALqkansegKLEIQKLSEQLQAA 801
Cdd:COG1196 175 EEAERKLEATE---ENLERLEDILGELERQLEPLERQAEKaeryrelkEELKELEAELL-------LLKLRELEAELEEL 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 802 EKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINK 881
Cdd:COG1196 245 EAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEE 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 882 LNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQ 961
Cdd:COG1196 325 LAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 962 IQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDmKKQMETSQNQYKDLQAKYEKETSEMITKH 1041
Cdd:COG1196 405 LEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAEL-EEEEEALLELLAELLEEAALLEAALAELL 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1042 DADIKgfkqnlLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARK---------EIELMSDKMRDLISEKE 1112
Cdd:COG1196 484 EELAE------AAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGveaayeaalEAALAAALQNIVVEDDE 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1113 TLAQERNTLKLEKE-----------------SLLSQHLEMESKILLVQQDREELwtknEELNSENKKILKQKEAAEAKSR 1175
Cdd:COG1196 558 VAAAAIEYLKAAKAgratflpldkiraraalAAALARGAIGAAVDLVASDLREA----DARYYVLGDTLLGRTLVAARLE 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1176 QESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELEHYQKLLE 1255
Cdd:COG1196 634 AALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAE 713
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1256 ENDRviKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKsthiALKNEIdcllqtnRSLQSEKEML- 1334
Cdd:COG1196 714 EERL--EEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLE----ELEREL-------ERLEREIEALg 780
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|.
gi 2024359610 1335 ---LKSREELcvslantanenQALKLRKDEMQTE---LETEREKLEKMTKD 1379
Cdd:COG1196 781 pvnLLAIEEY-----------EELEERYDFLSEQredLEEARETLEEAIEE 820
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
408-1229 |
1.04e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 83.95 E-value: 1.04e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 408 EAKMDQLRAMVEAA------DREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEDPENTQTKLEHARIKEL 481
Cdd:TIGR02168 151 EAKPEERRAIFEEAagiskyKERRKETERKLERTRENLDRLEDILNELERQLKSLERQAEKAERYKELKAELRELELALL 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 482 EQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLESSKHiddvdTSLSLLQEISSLQEKMA 561
Cdd:TIGR02168 231 VLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQK-----ELYALANEISRLEQQKQ 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 562 AAGKEHQREMSSLKEKFESSEEALRKEIKtLSASNERMGKENESLKTKLDHANKENSDVIELWKSkLESAIASHQQAMEE 641
Cdd:TIGR02168 306 ILRERLANLERQLEELEAQLEELESKLDE-LAEELAELEEKLEELKEELESLEAELEELEAELEE-LESRLEELEEQLET 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 642 LKVSFN---KGVGAQTAEFAELKTQMEKVKLDYENEMSNlklKQENEKSQHLKEIEALKAKLlevtEEKEQTLENLKAKL 718
Cdd:TIGR02168 384 LRSKVAqleLQIASLNNEIERLEARLERLEDRRERLQQE---IEELLKKLEEAELKELQAEL----EELEEELEELQEEL 456
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 719 ESVEDQhLVEMEDTLNKLQEAEIKVK-ELDVLQAKCNeqtkligSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQ 797
Cdd:TIGR02168 457 ERLEEA-LEELREELEEAEQALDAAErELAQLQARLD-------SLERLQENLEGFSEGVKALLKNQSGLSGILGVLSEL 528
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 798 LQAAEKQIQNLETEkvggsskvsnltkeLQGKEQKLLDleKNLSAVNQVKDSLEKELQ------LLKEKFTSAVDGAENA 871
Cdd:TIGR02168 529 ISVDEGYEAAIEAA--------------LGGRLQAVVV--ENLNAAKKAIAFLKQNELgrvtflPLDSIKGTEIQGNDRE 592
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 872 QRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLT--EAKVKLENDIAeimKSSGDSSAQLMKMN 949
Cdd:TIGR02168 593 ILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRpgYRIVTLDGDLV---RPGGVITGGSAKTN 669
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 950 DELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAK 1029
Cdd:TIGR02168 670 SSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEE-LEQLRKELEELSRQISALRKDLARLEAEVEQLEER 748
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1030 YEKETSEmITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKkqaEQAKSLSSVLASARKEIELMSDKMRDLIS 1109
Cdd:TIGR02168 749 IAQLSKE-LTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLK---EELKALREALDELRAELTLLNEEAANLRE 824
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1110 EKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKS 1189
Cdd:TIGR02168 825 RLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELR 904
|
810 820 830 840
....*....|....*....|....*....|....*....|
gi 2024359610 1190 KLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQAN 1229
Cdd:TIGR02168 905 ELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQER 944
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1209-2013 |
2.00e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 82.80 E-value: 2.00e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1209 NDALRSSESTLL-QQLKELQANKDAVDVACQKHIKEREELehyQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQ 1287
Cdd:TIGR02168 219 KAELRELELALLvLRLEELREELEELQEELKEAEEELEEL---TAELQELEEKLEELRLEVSELEEEIEELQKELYALAN 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1288 EVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELE 1367
Cdd:TIGR02168 296 EISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLE 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1368 TEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREEL---VNENKAVTEKLTKA 1444
Cdd:TIGR02168 376 ELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELqaeLEELEEELEELQEE 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1445 TADAVLAETAFTEKINELNLEKESVFSK--SLQFEKHN-EALLREKDELERKYSELLDEKKSLENAFS--------DMKR 1513
Cdd:TIGR02168 456 LERLEEALEELREELEEAEQALDAAERElaQLQARLDSlERLQENLEGFSEGVKALLKNQSGLSGILGvlselisvDEGY 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1514 EQELDF----SAKRLLVQENTTLKYSIEALEEELKKK------------------NLENQELIACRSDLSDLLKEAQDAR 1571
Cdd:TIGR02168 536 EAAIEAalggRLQAVVVENLNAAKKAIAFLKQNELGRvtflpldsikgteiqgndREILKNIEGFLGVAKDLVKFDPKLR 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1572 RTLENELAAVshakqVLSSSFNTCSSDIEILNRERT------ELQDKCQKLTGEVENmKENLTVEKKARILDKESfllER 1645
Cdd:TIGR02168 616 KALSYLLGGV-----LVVDDLDNALELAKKLRPGYRivtldgDLVRPGGVITGGSAK-TNSSILERRREIEELEE---KI 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1646 MELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAEL 1725
Cdd:TIGR02168 687 EELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEEL 766
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1726 EDvhscvsvMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKvVALLEQTDADFSC 1805
Cdd:TIGR02168 767 EE-------RLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRER-LESLERRIAATER 838
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1806 RLLVSEGKHELLLEEMSNLALklrEIERLQAQtfmqkfeadkrAEEVLQTMEKVTKEKDAIHQEkietlasLENSRQTNE 1885
Cdd:TIGR02168 839 RLEDLEEQIEELSEDIESLAA---EIEELEEL-----------IEELESELEALLNERASLEEA-------LALLRSELE 897
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1886 KLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENV-KLAEELGRSRDEVTSH 1964
Cdd:TIGR02168 898 ELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALEnKIEDDEEEARRRLKRL 977
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359610 1965 QKLEEERSVLN----NQLLEMKKRESTLKKEID---EERASLQKSISDTSALITQK 2013
Cdd:TIGR02168 978 ENKIKELGPVNlaaiEEYEELKERYDFLTAQKEdltEAKETLEEAIEEIDREARER 1033
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
357-1128 |
6.77e-15 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 81.27 E-value: 6.77e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 357 ALKEKQQHIEQ--LLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEAADREKVELLNQLEE 434
Cdd:TIGR02169 215 ALLKEKREYEGyeLLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 435 EKRKVEdlqfrvEEESITKGDLERKRQISEDPENTQTKLE------HARIKELEQSLLFEKTKADKLQRELEDTRVATVS 508
Cdd:TIGR02169 295 KIGELE------AEIASLERSIAEKERELEDAEERLAKLEaeidklLAEIEELEREIEEERKRRDKLTEEYAELKEELED 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 509 EKSRIMELERDLALRVKEVAELRGRLESSKH-IDDVDTSLSLLQEissLQEKMAAAGKEHQREMSSLKEK---FESSEEA 584
Cdd:TIGR02169 369 LRAELEEVDKEFAETRDELKDYREKLEKLKReINELKRELDRLQE---ELQRLSEELADLNAAIAGIEAKineLEEEKED 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 585 LRKEIK-------TLSASNERMGKENESLKTKLDHANKENSDVielwKSKLESAIASHQQ---------AMEELKVSFNK 648
Cdd:TIGR02169 446 KALEIKkqewkleQLAADLSKYEQELYDLKEEYDRVEKELSKL----QRELAEAEAQARAseervrggrAVEEVLKASIQ 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 649 GVGAQTAEFAELKTQMEK-VKLDYENEMSNLKLKQEN---EKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQ 724
Cdd:TIGR02169 522 GVHGTVAQLGSVGERYATaIEVAAGNRLNNVVVEDDAvakEAIELLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGF 601
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 725 --HLVEMEDtlnKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASE--EK-------LLDLAALQKANSEGKLEIQK 793
Cdd:TIGR02169 602 avDLVEFDP---KYEPAFKYVFGDTLVVEDIEAARRLMGKYRMVTLEGElfEKsgamtggSRAPRGGILFSRSEPAELQR 678
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 794 LSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQR 873
Cdd:TIGR02169 679 LRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKS 758
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 874 AMQETINKLNQKEEQFALMSSELEQLKSnltvmetklKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELR 953
Cdd:TIGR02169 759 ELKELEARIEELEEDLHKLEEALNDLEA---------RLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKE 829
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 954 L--KERQLEQIQLELTKANEKAVQ-----LQKNVEQTAQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDL 1026
Cdd:TIGR02169 830 YleKEIQELQEQRIDLKEQIKSIEkeienLNGKKEELEEELEELEAA-LRDLESRLGDLKKERDELEAQLRELERKIEEL 908
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1027 QAKYEKETsemitKHDADIKGFKQNLLDAEEALKAAQKKNDE-------LETQAEELKKQAEQAKSLSSVLASARKEIEL 1099
Cdd:TIGR02169 909 EAQIEKKR-----KRLSELKAKLEALEEELSEIEDPKGEDEEipeeelsLEDVQAELQRVEEEIRALEPVNMLAIQEYEE 983
|
810 820
....*....|....*....|....*....
gi 2024359610 1100 MSDKMRDLISEKETLAQERNTLKLEKESL 1128
Cdd:TIGR02169 984 VLKRLDELKEKRAKLEEERKAILERIEEY 1012
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
345-1044 |
3.18e-14 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 79.03 E-value: 3.18e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 345 ARKISGTTALQEALKE-----KQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlvRDGHDRHVLEMEAKMDQLRamvE 419
Cdd:PTZ00121 1223 AKKAEAVKKAEEAKKDaeeakKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEA--RKADELKKAEEKKKADEAK---K 1297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 420 AADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEDPENTQTKLEHARIKELEQSLlfEKTKADKLQREL 499
Cdd:PTZ00121 1298 AEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAE--EKAEAAEKKKEE 1375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 500 EDTRVATV----SEKSRIMELERDLALRVKEVAELRGRLESSKHIDDVDTSLSLLQEISSLQEKMAAAGK--------EH 567
Cdd:PTZ00121 1376 AKKKADAAkkkaEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKadeakkkaEE 1455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 568 QREMSSLKEKFESSEEALRKEIKTLSASN-ERMGKENESLKTKLDHANKENsdviELWKSKLESAIASHQQAMEELKvsf 646
Cdd:PTZ00121 1456 AKKAEEAKKKAEEAKKADEAKKKAEEAKKaDEAKKKAEEAKKKADEAKKAA----EAKKKADEAKKAEEAKKADEAK--- 1528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 647 nKGVGAQTAEfaELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHL 726
Cdd:PTZ00121 1529 -KAEEAKKAD--EAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEK 1605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 727 VEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEklldlaaLQKANSEGKLEIQKLSEQLQAAEKQIQ 806
Cdd:PTZ00121 1606 KMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEE-------LKKAEEENKIKAAEEAKKAEEDKKKAE 1678
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 807 NLETEKVGGSSKVSNLTKELQGKeQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKE 886
Cdd:PTZ00121 1679 EAKKAEEDEKKAAEALKKEAEEA-KKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKK 1757
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 887 EQFALMSSE----LEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQI 962
Cdd:PTZ00121 1758 KIAHLKKEEekkaEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVAD 1837
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 963 QLELTKANEKAVQLQK------NVEQTAQKAEQSQQETLKTHQEE---LKKMQDQL--TDMKKQMETSQNQYKDLQAKYE 1031
Cdd:PTZ00121 1838 SKNMQLEEADAFEKHKfnknneNGEDGNKEADFNKEKDLKEDDEEeieEADEIEKIdkDDIEREIPNNNMAGKNNDIIDD 1917
|
730
....*....|...
gi 2024359610 1032 KETSEMITKHDAD 1044
Cdd:PTZ00121 1918 KLDKDEYIKRDAE 1930
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
636-1481 |
4.45e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 78.57 E-value: 4.45e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 636 QQAMEELKVsfnkgVGAQTAEF----AELKTQMEKVKLDYENEMSNLKL---KQENEKSQHLKEIEALKAKLLEVT---E 705
Cdd:TIGR02169 173 EKALEELEE-----VEENIERLdliiDEKRQQLERLRREREKAERYQALlkeKREYEGYELLKEKEALERQKEAIErqlA 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 706 EKEQTLENLKAKLESVEDQhLVEMEDTLNKLqEAEIKVK---ELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQK 782
Cdd:TIGR02169 248 SLEEELEKLTEEISELEKR-LEEIEQLLEEL-NKKIKDLgeeEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLA 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 783 ansEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKft 862
Cdd:TIGR02169 326 ---KLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKRE-- 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 863 savdgaenaqraMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSS 942
Cdd:TIGR02169 401 ------------INELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYE 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 943 AQLMKMNDELRLKERQLEQIQLELTKAnekavQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQ-- 1020
Cdd:TIGR02169 469 QELYDLKEEYDRVEKELSKLQRELAEA-----EAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIev 543
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1021 ---------------------NQYKDLQA---------KYEKETSEMITKHDADIKGFKQNLLDAE-------------- 1056
Cdd:TIGR02169 544 aagnrlnnvvveddavakeaiELLKRRKAgratflplnKMRDERRDLSILSEDGVIGFAVDLVEFDpkyepafkyvfgdt 623
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1057 ---EALKAAQKKNDE--LETQAEELKKQ-------AEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLE 1124
Cdd:TIGR02169 624 lvvEDIEAARRLMGKyrMVTLEGELFEKsgamtggSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENR 703
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1125 KESLLSQHLEMESKILLVQQDREELwtkNEELNSENKKIlkqkEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLK 1204
Cdd:TIGR02169 704 LDELSQELSDASRKIGEIEKEIEQL---EQEEEKLKERL----EELEEDLSSLEQEIENVKSELKELEARIEELEEDLHK 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1205 ITQENDALRSSESTllQQLKELQANKDAVDvacqkhikereelehyqklleendrvikdkdDVIQRLQSSYDDLARNQRE 1284
Cdd:TIGR02169 777 LEEALNDLEARLSH--SRIPEIQAELSKLE-------------------------------EEVSRIEARLREIEQKLNR 823
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1285 LLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQT 1364
Cdd:TIGR02169 824 LTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELER 903
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1365 ELETEREKLEKMTKDNMDLKASLSSLSNFLEEM-----KSSREASNSEKIHLLQEALFASEQRLLA----------EREE 1429
Cdd:TIGR02169 904 KIEELEAQIEKKRKRLSELKAKLEALEEELSEIedpkgEDEEIPEEELSLEDVQAELQRVEEEIRAlepvnmlaiqEYEE 983
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|..
gi 2024359610 1430 LVNENKAVTEKLTKATADAvlaeTAFTEKINELNLEKESVFSKSlqFEKHNE 1481
Cdd:TIGR02169 984 VLKRLDELKEKRAKLEEER----KAILERIEEYEKKKREVFMEA--FEAINE 1029
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
727-1673 |
6.09e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 78.19 E-value: 6.09e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 727 VEMEDTLNKLQEAEIKVKELDVLQAKCNEQTkligsltQQIRASEEKLLDLAALQKanSEGKLEIQKLSEQLQAAEKQIQ 806
Cdd:TIGR02169 170 RKKEKALEELEEVEENIERLDLIIDEKRQQL-------ERLRREREKAERYQALLK--EKREYEGYELLKEKEALERQKE 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 807 NLETEkvggsskVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQllkekftsavDGAENAQRAMQETINKLnqke 886
Cdd:TIGR02169 241 AIERQ-------LASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIK----------DLGEEEQLRVKEKIGEL---- 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 887 eqfalmSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEImkssgdssaqlmkmndelrlkERQLEQIQLEL 966
Cdd:TIGR02169 300 ------EAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEEL---------------------EREIEEERKRR 352
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 967 TKANEKAVQLQKNVEQTAQKAEQsQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEmITKHDADIK 1046
Cdd:TIGR02169 353 DKLTEEYAELKEELEDLRAELEE-VDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEE-LADLNAAIA 430
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1047 GFKQNLLDAEEalkaaqkkndELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKE 1126
Cdd:TIGR02169 431 GIEAKINELEE----------EKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQAR 500
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1127 SLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQE---STEKVAliSEKSKLLSEIETAQADLL 1203
Cdd:TIGR02169 501 ASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEVAAGNRLNNvvvEDDAVA--KEAIELLKRRKAGRATFL 578
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1204 KITQENDALRssestLLQQLKELQANKDAVD-VACQKHIKER-----------EELEHYQKLLEENDRV-----IKDKDD 1266
Cdd:TIGR02169 579 PLNKMRDERR-----DLSILSEDGVIGFAVDlVEFDPKYEPAfkyvfgdtlvvEDIEAARRLMGKYRMVtlegeLFEKSG 653
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1267 VIQRLQSSYDDLARNQRELLQEVSILTAERDSaqekdldlksthiaLKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLA 1346
Cdd:TIGR02169 654 AMTGGSRAPRGGILFSRSEPAELQRLRERLEG--------------LKRELSSLQSELRRIENRLDELSQELSDASRKIG 719
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1347 NTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKssreasnsEKIHLLQEALFASEQRLLAE 1426
Cdd:TIGR02169 720 EIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELE--------EDLHKLEEALNDLEARLSHS 791
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1427 R-----------EELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYS 1495
Cdd:TIGR02169 792 RipeiqaelsklEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELE 871
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1496 ELLDEKKSLENAFSDMKREqeldfsakrllvqenttlkysIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLE 1575
Cdd:TIGR02169 872 ELEAALRDLESRLGDLKKE---------------------RDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALE 930
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1576 NELAAVSHAKQVLSSSfNTCSSDIEILNRERTELQDKCQKLtGEVeNMKEnltvekkarILDKESFLLERMELQNNIGFL 1655
Cdd:TIGR02169 931 EELSEIEDPKGEDEEI-PEEELSLEDVQAELQRVEEEIRAL-EPV-NMLA---------IQEYEEVLKRLDELKEKRAKL 998
|
970
....*....|....*...
gi 2024359610 1656 EKEVEEMREKNKEFLTEK 1673
Cdd:TIGR02169 999 EEERKAILERIEEYEKKK 1016
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
565-1365 |
1.05e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 77.49 E-value: 1.05e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 565 KEHQREMSSLKEKFESSEEALRKEiktlsasnerMGKENESLKTKLDHANKENSDVIELWKSKLESAIASHQQAMEELKV 644
Cdd:PTZ00121 1084 KEDNRADEATEEAFGKAEEAKKTE----------TGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKR 1153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 645 SFNKGVGAQTAEFAELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKakllevTEEKEQTLENLKAKLESVEDQ 724
Cdd:PTZ00121 1154 VEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAAR------KAEEERKAEEARKAEDAKKAE 1227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 725 HLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQ 804
Cdd:PTZ00121 1228 AVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEA 1307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 805 IQNLETEKvggssKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLN- 883
Cdd:PTZ00121 1308 KKKAEEAK-----KADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADa 1382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 884 -QKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLEndiaEIMKS-SGDSSAQLMKMNDELRLKERQLEQ 961
Cdd:PTZ00121 1383 aKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAE----EKKKAdEAKKKAEEAKKADEAKKKAEEAKK 1458
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 962 IQLELTKANEKavqlqKNVEQTAQKAEQSQQ-ETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITK 1040
Cdd:PTZ00121 1459 AEEAKKKAEEA-----KKADEAKKKAEEAKKaDEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEA 1533
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1041 HDADIKGFKQNLLDAEEALKAAQKKNDELETQAEElKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNT 1120
Cdd:PTZ00121 1534 KKADEAKKAEEKKKADELKKAEELKKAEEKKKAEE-AKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEA 1612
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1121 LKLEKESLLSQHL----EMESKILLVQQDREELWTKNEELN--SENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSE 1194
Cdd:PTZ00121 1613 KKAEEAKIKAEELkkaeEEKKKVEQLKKKEAEEKKKAEELKkaEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAE 1692
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1195 IETAQADLLKITQENDALRSSESTLLQQL-KELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQS 1273
Cdd:PTZ00121 1693 ALKKEAEEAKKAEELKKKEAEEKKKAEELkKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEE 1772
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1274 syddlARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQ 1353
Cdd:PTZ00121 1773 -----IRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEAD 1847
|
810
....*....|..
gi 2024359610 1354 ALKLRKDEMQTE 1365
Cdd:PTZ00121 1848 AFEKHKFNKNNE 1859
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1144-2059 |
1.37e-13 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 77.01 E-value: 1.37e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1144 QDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQL 1223
Cdd:TIGR00606 206 QMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDN 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1224 KELQANKDAVDVACQKHIKEREEleHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSI--LTAERDSAQE 1301
Cdd:TIGR00606 286 SELELKMEKVFQGTDEQLNDLYH--NHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRlqLQADRHQEHI 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1302 KDLDLKSTHIALKNEIDCLLQ---TNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTK 1378
Cdd:TIGR00606 364 RARDSLIQSLATRLELDGFERgpfSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIE 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1379 DNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEK 1458
Cdd:TIGR00606 444 LKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQE 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1459 INELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDE------KKSLENAFSDMKREQ---ELDFSAKRLLVQEN 1529
Cdd:TIGR00606 524 MEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLlgyfpnKKQLEDWLHSKSKEInqtRDRLAKLNKELASL 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1530 TTLKYSIEALEEELKKKNLENQELI-------ACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEIL 1602
Cdd:TIGR00606 604 EQNKNHINNELESKEEQLSSYEDKLfdvcgsqDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVC 683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1603 NR------ERTELQDKCQKLTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELL 1676
Cdd:TIGR00606 684 QRvfqteaELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRL 763
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1677 VQEKEKSETKLEEVIKEkmilyketEQLAskiEQLKSDFTSLSVSKAELEDVhscvsvmldelqhkyevtEKEKMELVQE 1756
Cdd:TIGR00606 764 KNDIEEQETLLGTIMPE--------EESA---KVCLTDVTIMERFQMELKDV------------------ERKIAQQAAK 814
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1757 NESLhaewkSLVIINEEILKEKEKLSKEYYKLHEKVvALLEQTDADFSCRLLVSEGKHELLLEEMSNLALKLREIERLQA 1836
Cdd:TIGR00606 815 LQGS-----DLDRTVQQVNQEKQEKQHELDTVVSKI-ELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEE 888
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1837 QTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNnLKNEEELTKSKELLNLEN 1916
Cdd:TIGR00606 889 QLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEK-VKNIHGYMKDIENKIQDG 967
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1917 KKVEELKKEFEALKLAAaqksqQLAALQEENVKLAEELGRSRDEVTSHQKLEeerSVLNNQLLEMKKRESTlkKEIDEER 1996
Cdd:TIGR00606 968 KDDYLKQKETELNTVNA-----QLEECEKHQEKINEDMRLMRQDIDTQKIQE---RWLQDNLTLRKRENEL--KEVEEEL 1037
|
890 900 910 920 930 940
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024359610 1997 ASLQKSISDTSalITQKDEELEKLRNEITVLRGENASAKTLQsvvKTLESDKLKLEEKVKNLE 2059
Cdd:TIGR00606 1038 KQHLKEMGQMQ--VLQMKQEHQKLEENIDLIKRNHVLALGRQ---KGYEKEIKHFKKELREPQ 1095
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
790-1396 |
2.65e-13 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 75.44 E-value: 2.65e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 790 EIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAE 869
Cdd:TIGR04523 41 KLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKN 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 870 NAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMN 949
Cdd:TIGR04523 121 KLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLE 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 950 ---DELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKdl 1026
Cdd:TIGR04523 201 lllSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTE-ISNTQTQLNQLKDEQNKIKKQLSEKQKELE-- 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1027 qakyekETSEMITKHDADIKGFKQNLLDAEEalkaaQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRD 1106
Cdd:TIGR04523 278 ------QNNKKIKELEKQLNQLKSEISDLNN-----QKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQ 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1107 LISEKETLAQERNTLKLEKEsllsqhlEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALIS 1186
Cdd:TIGR04523 347 LKKELTNSESENSEKQRELE-------EKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQ 419
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1187 EKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDA----VDVACQKHIKEREELEHYQKLLEENDRVIK 1262
Cdd:TIGR04523 420 EKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESletqLKVLSRSINKIKQNLEQKQKELKSKEKELK 499
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1263 DKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKS---------THIALKNEIDCLLQTNRSLQSEKEM 1333
Cdd:TIGR04523 500 KLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDelnkddfelKKENLEKEIDEKNKEIEELKQTQKS 579
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359610 1334 LLKSREELCVSLANTANENQALK---LRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEE 1396
Cdd:TIGR04523 580 LKKKQEEKQELIDQKEKEKKDLIkeiEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQ 645
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
516-1246 |
8.65e-13 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 74.38 E-value: 8.65e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 516 LERDLALRVKEVAELRGRLESSKHIDDvDTSLSLLQEISSLQEKMAAAGKEHQrEMSSLKEKFESSEEALRKEIKTLSas 595
Cdd:pfam15921 76 IERVLEEYSHQVKDLQRRLNESNELHE-KQKFYLRQSVIDLQTKLQEMQMERD-AMADIRRRESQSQEDLRNQLQNTV-- 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 596 nermgKENESLKT-KLDHANKENSDVIELWKSKLesaiaSHQQAMEELK---VSFNKGVGAQ--------TAEFAELKTQ 663
Cdd:pfam15921 152 -----HELEAAKClKEDMLEDSNTQIEQLRKMML-----SHEGVLQEIRsilVDFEEASGKKiyehdsmsTMHFRSLGSA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 664 MEKVKLDYENEMSNLKLKQENEKSQhlkeIEALKAkllEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKV 743
Cdd:pfam15921 222 ISKILRELDTEISYLKGRIFPVEDQ----LEALKS---ESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 744 K----ELDVLQAKCNEQTKLIGSLTQQIRASEEKLLdlAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKV 819
Cdd:pfam15921 295 NsiqsQLEIIQEQARNQNSMYMRQLSDLESTVSQLR--SELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQES 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 820 SNLTKELQG------KEQKLLDLEKN----------------------LSAVNQVKDSLEKELQLLKEKFTSAVDGAENA 871
Cdd:pfam15921 373 GNLDDQLQKlladlhKREKELSLEKEqnkrlwdrdtgnsitidhlrreLDDRNMEVQRLEALLKAMKSECQGQMERQMAA 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 872 QRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLT----EAKVKLENDIAEIMKSSGDSSAQLMK 947
Cdd:pfam15921 453 IQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTaslqEKERAIEATNAEITKLRSRVDLKLQE 532
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 948 MN------DELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQsQQETLKTHQEELKKMQDQLTDMKKQMEtsqn 1021
Cdd:pfam15921 533 LQhlknegDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQ-HGRTAGAMQVEKAQLEKEINDRRLELQ---- 607
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1022 QYKDLQAKYEKETSEMITKHdADIKGFKQNLLDA-EEALKAA----QKKN---DELETQAEELKKQAEQAKSLSSVLASA 1093
Cdd:pfam15921 608 EFKILKDKKDAKIRELEARV-SDLELEKVKLVNAgSERLRAVkdikQERDqllNEVKTSRNELNSLSEDYEVLKRNFRNK 686
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1094 RKEIELMSDKMR-DLISEKETLAQERNTLKlekesllSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEA 1172
Cdd:pfam15921 687 SEEMETTTNKLKmQLKSAQSELEQTRNTLK-------SMEGSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTN 759
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024359610 1173 KSRqestEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVA---CQKHIKEREE 1246
Cdd:pfam15921 760 ANK----EKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQfaeCQDIIQRQEQ 832
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1355-2103 |
1.20e-12 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 73.61 E-value: 1.20e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1355 LKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSRE---ASNSEKIHLLQEALFASEQRLLAEREELV 1431
Cdd:pfam15921 115 LQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEdmlEDSNTQIEQLRKMMLSHEGVLQEIRSILV 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1432 NENKAVTEKLTKATADAVL----AETAFTEKINELNLEKESVFSKSLQFEKHNEALlreKDELERKYSELLDEKKS-LEN 1506
Cdd:pfam15921 195 DFEEASGKKIYEHDSMSTMhfrsLGSAISKILRELDTEISYLKGRIFPVEDQLEAL---KSESQNKIELLLQQHQDrIEQ 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1507 AFSDMKRE-QELDFSAKRLLVQENTtLKYSIEALEEELKKKN-LENQELIACRSDLSDLLKEAQDARRTLENELAAVSHA 1584
Cdd:pfam15921 272 LISEHEVEiTGLTEKASSARSQANS-IQSQLEIIQEQARNQNsMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQ 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1585 KQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTVEKKA-------------------RILDKESFLLER 1645
Cdd:pfam15921 351 LVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQnkrlwdrdtgnsitidhlrRELDDRNMEVQR 430
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1646 MEL------QNNIGFLEKEVEEMREKNKEFLTEKELLVQ---EKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFT 1716
Cdd:pfam15921 431 LEAllkamkSECQGQMERQMAAIQGKNESLEKVSSLTAQlesTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKER 510
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1717 SLSVSKAELEDVHSCVSVMLDELQHKYevTEKEKMELVQ---ENESLHAEWKSLVIineEILKEKEKLSKEYYKLHEKVV 1793
Cdd:pfam15921 511 AIEATNAEITKLRSRVDLKLQELQHLK--NEGDHLRNVQtecEALKLQMAEKDKVI---EILRQQIENMTQLVGQHGRTA 585
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1794 ALLEQTDADFSCRLlvseGKHELLLEEMSNLA----LKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIhqe 1869
Cdd:pfam15921 586 GAMQVEKAQLEKEI----NDRRLELQEFKILKdkkdAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQL--- 658
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1870 kietLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVE-ELKKEFEALKLAAAQKSQQLAALQEENV 1948
Cdd:pfam15921 659 ----LNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQsELEQTRNTLKSMEGSDGHAMKVAMGMQK 734
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1949 KLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLR 2028
Cdd:pfam15921 735 QITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALD 814
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 2029 GENASAKTLQSVVKTLESDKLKLEEK----VKNLE-------QKLKAKSEQPLTVTSPSGDI---------------AAN 2082
Cdd:pfam15921 815 KASLQFAECQDIIQRQEQESVRLKLQhtldVKELQgpgytsnSSMKPRLLQPASFTRTHSNVpssqstasflshhsrKTN 894
|
810 820
....*....|....*....|.
gi 2024359610 2083 LLQDESAEDKQQEIDFLNSVI 2103
Cdd:pfam15921 895 ALKEDPTRDLKQLLQELRSVI 915
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
999-1785 |
2.27e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 72.78 E-value: 2.27e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 999 QEELKKMQDQLTDMKKQMETSQNQYKdlQAKYEKETSEMITKHDADIkgfkqnlldaeeALKAAQKKNDELETQAEELKK 1078
Cdd:TIGR02168 185 RENLDRLEDILNELERQLKSLERQAE--KAERYKELKAELRELELAL------------LVLRLEELREELEELQEELKE 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1079 QAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELns 1158
Cdd:TIGR02168 251 AEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEEL-- 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1159 ENKKILKQKEAAEAKSRQESTEKV-----ALISEKSKLLSEIETAQADLLK-ITQENDALRSSESTLLQQLKELQANKDA 1232
Cdd:TIGR02168 329 ESKLDELAEELAELEEKLEELKEElesleAELEELEAELEELESRLEELEEqLETLRSKVAQLELQIASLNNEIERLEAR 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1233 VDVACQKHIKEREELEHYQKLLEENDRviKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIA 1312
Cdd:TIGR02168 409 LERLEDRRERLQQEIEELLKKLEEAEL--KELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQ 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1313 LKNEIDCL---LQTNRSLQSEKEMLLKSRE-------------------ELCVSLANTANENQAL----KLRKDEMQTEL 1366
Cdd:TIGR02168 487 LQARLDSLerlQENLEGFSEGVKALLKNQSglsgilgvlselisvdegyEAAIEAALGGRLQAVVvenlNAAKKAIAFLK 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1367 ETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNS-----EKIHLLQEALFA------SEQRLLAEREELVNENK 1435
Cdd:TIGR02168 567 QNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDlvkfdPKLRKALSYLLGgvlvvdDLDNALELAKKLRPGYR 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1436 AVTEKLTKATADAVLAETAFTEKINELNLEKEsvfskSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQ 1515
Cdd:TIGR02168 647 IVTLDGDLVRPGGVITGGSAKTNSSILERRRE-----IEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKEL 721
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1516 ELDFSAKRLLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTC 1595
Cdd:TIGR02168 722 EELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKAL 801
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1596 SSDIEILNRERTELQDKCQKLTGEVENMkENLTVEKKARILD----KESFLLERMELQNNIGFLEKEVEEMREKNKEFLT 1671
Cdd:TIGR02168 802 REALDELRAELTLLNEEAANLRERLESL-ERRIAATERRLEDleeqIEELSEDIESLAAEIEELEELIEELESELEALLN 880
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1672 EKE-------LLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELED-VHSCVSVMLDELQHKY 1743
Cdd:TIGR02168 881 ERAsleealaLLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQErLSEEYSLTLEEAEALE 960
|
810 820 830 840
....*....|....*....|....*....|....*....|..
gi 2024359610 1744 EVTEKEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEY 1785
Cdd:TIGR02168 961 NKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERY 1002
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
358-1006 |
4.72e-12 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 71.69 E-value: 4.72e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 358 LKEKQQHIEQLLAERDLE----RAEVAKATSHVGEIEQELALVRDG-------HDRHVLEMEAKMDQLRAMVEAADREKV 426
Cdd:pfam15921 262 LQQHQDRIEQLISEHEVEitglTEKASSARSQANSIQSQLEIIQEQarnqnsmYMRQLSDLESTVSQLRSELREAKRMYE 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 427 ELLNQLEEekrkvedlQFRVEEESITKGDLERKrQISEDPENTQTKLE------HARIKELeqSLLFEKTK--------- 491
Cdd:pfam15921 342 DKIEELEK--------QLVLANSELTEARTERD-QFSQESGNLDDQLQklladlHKREKEL--SLEKEQNKrlwdrdtgn 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 492 ---ADKLQRELEDtrvatvseksRIMELERDLALRVKEVAELRGRLEsskhiddvdtslsllQEISSLQEKmaaagKEHQ 568
Cdd:pfam15921 411 sitIDHLRRELDD----------RNMEVQRLEALLKAMKSECQGQME---------------RQMAAIQGK-----NESL 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 569 REMSSLKEKFESSEEALRKEIKTLSASnermgkeneslKTKLDHANKENSDvielwkskLESAIASHQQAMEelkvsfnk 648
Cdd:pfam15921 461 EKVSSLTAQLESTKEMLRKVVEELTAK-----------KMTLESSERTVSD--------LTASLQEKERAIE-------- 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 649 gvgAQTAEFAELKTQMEkvkldyenemsnLKLKQenekSQHLKEiealkakllevteeKEQTLENLKAKLESVedqhlve 728
Cdd:pfam15921 514 ---ATNAEITKLRSRVD------------LKLQE----LQHLKN--------------EGDHLRNVQTECEAL------- 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 729 medtlnKLQEAEiKVKELDVLQAKCNEQTKLIGsltQQIRASEEKLLDLAALQKANSEGKLEIQKLS-------EQLQAA 801
Cdd:pfam15921 554 ------KLQMAE-KDKVIEILRQQIENMTQLVG---QHGRTAGAMQVEKAQLEKEINDRRLELQEFKilkdkkdAKIREL 623
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 802 EKQIQNLETEKV----GGSSKVSNLTKELQGKEQKLLDLEKNLSAVNqvkdSLEKELQLLKEKFTSAVDGAE-------- 869
Cdd:pfam15921 624 EARVSDLELEKVklvnAGSERLRAVKDIKQERDQLLNEVKTSRNELN----SLSEDYEVLKRNFRNKSEEMEtttnklkm 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 870 ---NAQRAMQETINKLNQKE--------------EQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIA 932
Cdd:pfam15921 700 qlkSAQSELEQTRNTLKSMEgsdghamkvamgmqKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELS 779
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024359610 933 EIMKSSGDSSAQLmkmnDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQ 1006
Cdd:pfam15921 780 TVATEKNKMAGEL----EVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQESVRLKLQHTLDVKELQ 849
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1360-2064 |
5.13e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 71.64 E-value: 5.13e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1360 DEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREasNSEKIHLLQEALFASEQRLLA-EREELVNENKAVT 1438
Cdd:TIGR02169 166 AEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRRERE--KAERYQALLKEKREYEGYELLkEKEALERQKEAIE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1439 EKLtkATADAVLAEtaFTEKINELNLEKESVFSKSLQFEKHNEALLR-EKDELERKYSELLDEKKSLENAFSDMKREQEL 1517
Cdd:TIGR02169 244 RQL--ASLEEELEK--LTEEISELEKRLEEIEQLLEELNKKIKDLGEeEQLRVKEKIGELEAEIASLERSIAEKERELED 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1518 DFSAKRLLVQENTTLKYSIEALEEELKKKNLEnqeliacRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSS 1597
Cdd:TIGR02169 320 AEERLAKLEAEIDKLLAEIEELEREIEEERKR-------RDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYRE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1598 DIEILNRERTE-------LQDKCQKLTGEVENMKENLTVeKKARILDKESfllERMELQNNIGFLEKEVEEMREKNKEFL 1670
Cdd:TIGR02169 393 KLEKLKREINElkreldrLQEELQRLSEELADLNAAIAG-IEAKINELEE---EKEDKALEIKKQEWKLEQLAADLSKYE 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1671 TEKELLVQEKEKSETKLEEVIKEkmILYKETEQLASKIEQLKSDFTSLsVSKAELEDVHSCVSvMLDELQHKY------- 1743
Cdd:TIGR02169 469 QELYDLKEEYDRVEKELSKLQRE--LAEAEAQARASEERVRGGRAVEE-VLKASIQGVHGTVA-QLGSVGERYataieva 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1744 ------------EVTEKEKMELVQENESLHAEWKSLVIINEEiLKEKEKLSK-----------EYYKLHEKVVA------ 1794
Cdd:TIGR02169 545 agnrlnnvvvedDAVAKEAIELLKRRKAGRATFLPLNKMRDE-RRDLSILSEdgvigfavdlvEFDPKYEPAFKyvfgdt 623
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1795 -LLEQTDAD----FSCRLLVSEGKhelLLEE---MSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAI 1866
Cdd:TIGR02169 624 lVVEDIEAArrlmGKYRMVTLEGE---LFEKsgaMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRI 700
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1867 HQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEE 1946
Cdd:TIGR02169 701 ENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEA 780
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1947 NVKLAEELGRSR-DEVTSH-QKLEEERSVLNNQLLEMKKRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEI 2024
Cdd:TIGR02169 781 LNDLEARLSHSRiPEIQAElSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLN 860
|
730 740 750 760
....*....|....*....|....*....|....*....|
gi 2024359610 2025 TVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQKLKA 2064
Cdd:TIGR02169 861 GKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRE 900
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
215-275 |
6.51e-12 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 70.87 E-value: 6.51e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024359610 215 LKIGDRVLVGGTKaGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPRYGLF 275
Cdd:COG5244 4 LSVNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIF 63
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
677-1278 |
8.24e-12 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 70.82 E-value: 8.24e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 677 NLKLKQENEKSQHLKEIEALKAKLlevtEEKEQTLENL-KAKLESVEDQHLVEMEDTLNKLQEAEIKVKE------LDVL 749
Cdd:TIGR04523 26 NIANKQDTEEKQLEKKLKTIKNEL----KNKEKELKNLdKNLNKDEEKINNSNNKIKILEQQIKDLNDKLkknkdkINKL 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 750 QAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKL-----------EIQKLSEQLQAAEKQIQNLETEKVGGSSK 818
Cdd:TIGR04523 102 NSDLSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDkflteikkkekELEKLNNKYNDLKKQKEELENELNLLEKE 181
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 819 VSNLTKELQGKEQKLLDLEKNLS---AVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSE 895
Cdd:TIGR04523 182 KLNIQKNIDKIKNKLLKLELLLSnlkKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDE 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 896 LEQLKSNLtvmETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMK-MNDELRLKERQLEQIQLELTKANEKAV 974
Cdd:TIGR04523 262 QNKIKKQL---SEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKeLKSELKNQEKKLEEIQNQISQNNKIIS 338
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 975 QLQKNVEQTAQKAEQSQQETLKThQEELKKMQDQLTDMKKQmetsQNQYKDLQAKYEKETSEMITKhdadIKGFKQNLLD 1054
Cdd:TIGR04523 339 QLNEQISQLKKELTNSESENSEK-QRELEEKQNEIEKLKKE----NQSYKQEIKNLESQINDLESK----IQNQEKLNQQ 409
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1055 AEEALKAAQKKNDELETQAEELK----KQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLS 1130
Cdd:TIGR04523 410 KDEQIKKLQQEKELLEKEIERLKetiiKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQK 489
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1131 QHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISE---------KSKLLSEIETAQAD 1201
Cdd:TIGR04523 490 ELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDElnkddfelkKENLEKEIDEKNKE 569
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024359610 1202 LLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIkdkDDVIQRLQSSYDDL 1278
Cdd:TIGR04523 570 IEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKL---SSIIKNIKSKKNKL 643
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
353-1018 |
2.55e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.20 E-value: 2.55e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 353 ALQEALKEKQqhIEQLLAERDLERAEVAKATSHVGEIEQELAlvrdghdrhvlemeakmdQLRAMVEAADREKVELLNQL 432
Cdd:COG1196 217 ELKEELKELE--AELLLLKLRELEAELEELEAELEELEAELE------------------ELEAELAELEAELEELRLEL 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 433 EEEKRKVEDLQFRVEEESITKGDLERKRQisedpentqtkLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSR 512
Cdd:COG1196 277 EELELELEEAQAEEYELLAELARLEQDIA-----------RLEERRRELEERLEELEEELAELEEELEELEEELEELEEE 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 513 IMELERDLALRVKEVAELRGRLEsskhiddvdtslSLLQEISSLQEKMAAAGKEHQREMSSLKEKfESSEEALRKEIKTL 592
Cdd:COG1196 346 LEEAEEELEEAEAELAEAEEALL------------EAEAELAEAEEELEELAEELLEALRAAAEL-AAQLEELEEAEEAL 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 593 SASNERMGKENESLKTKLDHANKEnSDVIELWKSKLESAIASHQQAMEELKVSfnkgVGAQTAEFAELKTQMEKVKLDYE 672
Cdd:COG1196 413 LERLERLEEELEELEEALAELEEE-EEEEEEALEEAAEEEAELEEEEEALLEL----LAELLEEAALLEAALAELLEELA 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 673 NEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQhlvemedtlnklqeaeikvkeldvlqak 752
Cdd:COG1196 488 EAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAA---------------------------- 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 753 cnEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQK 832
Cdd:COG1196 540 --LEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYV 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 833 LLDLEKNLSAVNQVKDS----LEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMET 908
Cdd:COG1196 618 LGDTLLGRTLVAARLEAalrrAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEE 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 909 KLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQK-- 986
Cdd:COG1196 698 ALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREie 777
|
650 660 670 680
....*....|....*....|....*....|....*....|
gi 2024359610 987 --------AEQSQQETlkthQEELKKMQDQLTDMKKQMET 1018
Cdd:COG1196 778 algpvnllAIEEYEEL----EERYDFLSEQREDLEEARET 813
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1775-2064 |
4.10e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 68.81 E-value: 4.10e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1775 LKEKEKLSKEYYKLHEKVVALLEQTDAdfscrllvsEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQ 1854
Cdd:COG1196 218 LKEELKELEAELLLLKLRELEAELEEL---------EAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1855 TMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAA 1934
Cdd:COG1196 289 EEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1935 QKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESTLKKEIDEERASLQKSISDTSALITQKD 2014
Cdd:COG1196 369 EAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAA 448
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2024359610 2015 EELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQKLKA 2064
Cdd:COG1196 449 EEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLE 498
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
517-1264 |
6.19e-11 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 68.33 E-value: 6.19e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 517 ERDLALRVKEVAElrgrlESSKHIDDVDTSLSLLQEISSLQEKMaaagKEHQREMSSLKEKFESSEEALRKEIKTLSAS- 595
Cdd:pfam12128 229 DIQAIAGIMKIRP-----EFTKLQQEFNTLESAELRLSHLHFGY----KSDETLIASRQEERQETSAELNQLLRTLDDQw 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 596 NERMGKENESLKT-KLDHANKENS-DVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFAELKTQMEKVKLDYEN 673
Cdd:pfam12128 300 KEKRDELNGELSAaDAAVAKDRSElEALEDQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNR 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 674 EMSNLKlkqenekSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVK----ELDVL 749
Cdd:pfam12128 380 RRSKIK-------EQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQALESELREQLEAGKLEFNEEEYRLKsrlgELKLR 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 750 QAkcneqtkligsltqQIRASEEKLLDLAALQKansegklEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGK 829
Cdd:pfam12128 453 LN--------------QATATPELLLQLENFDE-------RIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQA 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 830 EQKLLDLEKNLSAVNQVKDS--------LEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEE-QFALMSSELEQLK 900
Cdd:pfam12128 512 SRRLEERQSALDELELQLFPqagtllhfLRKEAPDWEQSIGKVISPELLHRTDLDPEVWDGSVGGElNLYGVKLDLKRID 591
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 901 SNLTVMETklKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNV 980
Cdd:pfam12128 592 VPEWAASE--EELRERLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKK 669
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 981 EQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMetsQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALK 1060
Cdd:pfam12128 670 NKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQ---KEQKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAK 746
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1061 AAQKkndELETQ-AEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKI 1139
Cdd:pfam12128 747 AELK---ALETWyKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAI 823
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1140 LLVQQDreeLWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSeietaqadlLKITQENDALRSSESTL 1219
Cdd:pfam12128 824 SELQQQ---LARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLAT---------LKEDANSEQAQGSIGER 891
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 2024359610 1220 LQQLKELQANKDAVDVACQKHI---------KEREEL-EHYQKlLEENDRVIKDK 1264
Cdd:pfam12128 892 LAQLEDLKLKRDYLSESVKKYVehfknviadHSGSGLaETWES-LREEDHYQNDK 945
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1242-2063 |
6.90e-11 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 68.17 E-value: 6.90e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1242 KEREELEHYQKLLEENDRVIKDKDDVIQRLQSsyddlarnqrellqevsiltaERDSAqEKDLDLKSTHIalKNEIDCLL 1321
Cdd:TIGR02169 174 KALEELEEVEENIERLDLIIDEKRQQLERLRR---------------------EREKA-ERYQALLKEKR--EYEGYELL 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1322 QTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNM-DLKASLSSLSNFLEEMKSS 1400
Cdd:TIGR02169 230 KEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQlRVKEKIGELEAEIASLERS 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1401 REASNSEKIHLLQEA--LFASEQRLLAEREEL---VNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQ 1475
Cdd:TIGR02169 310 IAEKERELEDAEERLakLEAEIDKLLAEIEELereIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKD 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1476 FEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELK----KKNLENQ 1551
Cdd:TIGR02169 390 YREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEqlaaDLSKYEQ 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1552 ELIACRSDLSDLLKEAQDARRtlenELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLtGEVE---------- 1621
Cdd:TIGR02169 470 ELYDLKEEYDRVEKELSKLQR----ELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQL-GSVGeryataieva 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1622 --NMKENLTVEK-----------KARILDKESFL-----------LERMELQNNIGFLEKEVEEMREKNKEFL------- 1670
Cdd:TIGR02169 545 agNRLNNVVVEDdavakeaiellKRRKAGRATFLplnkmrderrdLSILSEDGVIGFAVDLVEFDPKYEPAFKyvfgdtl 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1671 ------TEKELLVQ-----------EKEKSET----KLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDvh 1729
Cdd:TIGR02169 625 vvedieAARRLMGKyrmvtlegelfEKSGAMTggsrAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIEN-- 702
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1730 scvsvMLDELQHKYEVTEKEKMELVQENESLHAEwkslviinEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSCRLlv 1809
Cdd:TIGR02169 703 -----RLDELSQELSDASRKIGEIEKEIEQLEQE--------EEKLKERLEELEEDLSSLEQEIENVKSELKELEARI-- 767
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1810 segkhELLLEEMSNLALKLREIERLQAQTFMQKFEADKRA-EEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQ 1888
Cdd:TIGR02169 768 -----EELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKlEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQR 842
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1889 NELDMLKQNNLKNEEELtkskellnleNKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVtshQKLE 1968
Cdd:TIGR02169 843 IDLKEQIKSIEKEIENL----------NGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKI---EELE 909
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1969 EERSVLNNQLLEMKKRESTLKKEIDEERASLQKSISDTSALITQKD--EELEKLRNEITVLRGENASA-----------K 2035
Cdd:TIGR02169 910 AQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDvqAELQRVEEEIRALEPVNMLAiqeyeevlkrlD 989
|
890 900
....*....|....*....|....*...
gi 2024359610 2036 TLQSVVKTLESDKLKLEEKVKNLEQKLK 2063
Cdd:TIGR02169 990 ELKEKRAKLEEERKAILERIEEYEKKKR 1017
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
673-1207 |
7.98e-11 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 67.35 E-value: 7.98e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 673 NEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEE---KEQTLENLKAKlesveDQHLVEMEDTLNKLQEAEIKVKE-LDV 748
Cdd:TIGR04523 162 NDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKllkLELLLSNLKKK-----IQKNKSLESQISELKKQNNQLKDnIEK 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 749 LQAKCNEQTKLIGSLTQQIRASEEKLLD----LAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKvsNLTK 824
Cdd:TIGR04523 237 KQQEINEKTTEISNTQTQLNQLKDEQNKikkqLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNK--ELKS 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 825 ELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLT 904
Cdd:TIGR04523 315 ELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQIN 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 905 VMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTA 984
Cdd:TIGR04523 395 DLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLS 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 985 QKAEQSQQeTLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKyEKETSEMITKHDADIKGFKQNLLDAEEALKA--A 1062
Cdd:TIGR04523 475 RSINKIKQ-NLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKK-ISSLKEKIEKLESEKKEKESKISDLEDELNKddF 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1063 QKKNDELETQAEELKKQAEQAKSLSSVLASARKEIElmsdkmrDLISEKETlaqerntlklEKESLLSQHLEMESKILLV 1142
Cdd:TIGR04523 553 ELKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQ-------ELIDQKEK----------EKKDLIKEIEEKEKKISSL 615
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024359610 1143 QQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQ 1207
Cdd:TIGR04523 616 EKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKIDDIIE 680
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
977-1554 |
1.46e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 66.58 E-value: 1.46e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 977 QKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQaKYEKETSEMITKHDADIKGFKQNLLDAE 1056
Cdd:TIGR04523 31 QDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILE-QQIKDLNDKLKKNKDKINKLNSDLSKIN 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1057 EALKAAQKKNDELETQAEELKKQAEQAKSL----SSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQH 1132
Cdd:TIGR04523 110 SEIKNDKEQKNKLEVELNKLEKQKKENKKNidkfLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNI 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1133 LEMESKILLVQQDREELWTKNEELNSENKKILKQKEaaeaKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDAL 1212
Cdd:TIGR04523 190 DKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKK----QNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKI 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1213 RSSESTLLQQLKELQANKDAVDVACQKHIKEREEL--EHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVS 1290
Cdd:TIGR04523 266 KKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLnnQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQIS 345
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1291 ILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETER 1370
Cdd:TIGR04523 346 QLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLE 425
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1371 EKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEalfaseqrlLAEREELVNENKAVTEKLTKATADAVL 1450
Cdd:TIGR04523 426 KEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQ---------LKVLSRSINKIKQNLEQKQKELKSKEK 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1451 AETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRL--LVQE 1528
Cdd:TIGR04523 497 ELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENLEKEIDEKNKEIeeLKQT 576
|
570 580
....*....|....*....|....*.
gi 2024359610 1529 NTTLKYSIEALEEELKKKNLENQELI 1554
Cdd:TIGR04523 577 QKSLKKKQEEKQELIDQKEKEKKDLI 602
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
831-1047 |
1.66e-10 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 65.17 E-value: 1.66e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 831 QKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKL 910
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 911 KEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMN--------------DELRLKERQLEQIQLELTKANEKAVQL 976
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLqylkylaparreqaEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024359610 977 QKNVEQ---TAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKG 1047
Cdd:COG4942 180 LAELEEeraALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKG 253
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
755-1271 |
2.13e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 66.24 E-value: 2.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 755 EQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLL 834
Cdd:PRK03918 197 EKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIE 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 835 DLEKNLSAVNQVKDSLEK--ELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKE 912
Cdd:PRK03918 277 ELEEKVKELKELKEKAEEyiKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEE 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 913 REEREQQLTEAKVKLENdIAEIMKSSGDSSAQlmKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQ- 991
Cdd:PRK03918 357 LEERHELYEEAKAKKEE-LERLKKRLTGLTPE--KLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKk 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 992 ---------QETLKTHQEEL-KKMQDQLTDMKKQMETSQNQYKDLQAkyEKETSEMITKHDADIKGFKQNLLDAEEALKA 1061
Cdd:PRK03918 434 akgkcpvcgRELTEEHRKELlEEYTAELKRIEKELKEIEEKERKLRK--ELRELEKVLKKESELIKLKELAEQLKELEEK 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1062 AQKKN-DELETQAEELKKQAEQAKSLS---SVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESL-LSQHLEME 1136
Cdd:PRK03918 512 LKKYNlEELEKKAEEYEKLKEKLIKLKgeiKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELgFESVEELE 591
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1137 SKIllvqQDREELWTKNEELnSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQEND------ 1210
Cdd:PRK03918 592 ERL----KELEPFYNEYLEL-KDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEyeelre 666
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024359610 1211 ---ALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRL 1271
Cdd:PRK03918 667 eylELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKV 730
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
408-1139 |
3.54e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 65.52 E-value: 3.54e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 408 EAKMDQLRAMVEAADREKVELLnqLEEEKRKVEDLQFRVEEESitkgDLERKRQ--ISEDPENTQTKLEHARIKEleQSL 485
Cdd:pfam15921 58 EVELDSPRKIIAYPGKEHIERV--LEEYSHQVKDLQRRLNESN----ELHEKQKfyLRQSVIDLQTKLQEMQMER--DAM 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 486 LFEKTKADKLQRELEDTRVATVSEKSRIMELERD-LALRVKEVAELRGRLESSKHIddvdtslslLQEISS-LQEKMAAA 563
Cdd:pfam15921 130 ADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDmLEDSNTQIEQLRKMMLSHEGV---------LQEIRSiLVDFEEAS 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 564 GKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELwksklesAIASHQQAMEELK 643
Cdd:pfam15921 201 GKKIYEHDSMSTMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKSESQNKIEL-------LLQQHQDRIEQLI 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 644 VSFNKGVGAQTAEFAELKTQMEKVkldyENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVED 723
Cdd:pfam15921 274 SEHEVEITGLTEKASSARSQANSI----QSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEK 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 724 QHLVEMEDtlnkLQEAEIKVKELDVLQAKCNEQ-TKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAE 802
Cdd:pfam15921 350 QLVLANSE----LTEARTERDQFSQESGNLDDQlQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRN 425
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 803 KQIQNLE----TEKVGGSSKVSNLTKELQGKEQKLldleKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQET 878
Cdd:pfam15921 426 MEVQRLEallkAMKSECQGQMERQMAAIQGKNESL----EKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDL 501
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 879 INKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLE---------NDIAEIMKSSGDSSAQLM--- 946
Cdd:pfam15921 502 TASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEalklqmaekDKVIEILRQQIENMTQLVgqh 581
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 947 ------------KMNDELRLKERQLEQIQLELTKANEKAVQLQKNV---EQTAQKAEQSQQETLKThQEELKKMQDQLTD 1011
Cdd:pfam15921 582 grtagamqvekaQLEKEINDRRLELQEFKILKDKKDAKIRELEARVsdlELEKVKLVNAGSERLRA-VKDIKQERDQLLN 660
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1012 mkkQMETSQNQYKDLQAKYE---------KETSEMIT-KHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQ-- 1079
Cdd:pfam15921 661 ---EVKTSRNELNSLSEDYEvlkrnfrnkSEEMETTTnKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQit 737
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359610 1080 -------AEQAKS--LSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKI 1139
Cdd:pfam15921 738 akrgqidALQSKIqfLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKV 806
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
858-1675 |
3.82e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 65.52 E-value: 3.82e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 858 KEKFTSAVDGAENAQRAMQETINKLNQ-KEEQFALMSSELEQLKSNLTVMETK------LKEREEREQQltEAKVKLEND 930
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNElHEKQKFYLRQSVIDLQTKLQEMQMErdamadIRRRESQSQE--DLRNQLQNT 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 931 IAEI----------MKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQ-QETLKTHQ 999
Cdd:pfam15921 151 VHELeaakclkedmLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTMHFRSLGSAiSKILRELD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1000 EELKKMQDQLTDMKKQMET----SQNQYKDLQAKYEKETSEMITKHDADIKGFKqnlldaeEALKAAQKKNDELETQAEE 1075
Cdd:pfam15921 231 TEISYLKGRIFPVEDQLEAlkseSQNKIELLLQQHQDRIEQLISEHEVEITGLT-------EKASSARSQANSIQSQLEI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1076 LKKQAEQAKSLSsvlasarkeielmsdkMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEE 1155
Cdd:pfam15921 304 IQEQARNQNSMY----------------MRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQ 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1156 LNSENKKILKQKEAAEAKSRQESTEkVALISEKSKLLSEIETAQADLLkitqenDALRSSESTLLQQLKELQANKDAVDV 1235
Cdd:pfam15921 368 FSQESGNLDDQLQKLLADLHKREKE-LSLEKEQNKRLWDRDTGNSITI------DHLRRELDDRNMEVQRLEALLKAMKS 440
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1236 ACQKHIKER--------EELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQREllqeVSILTAerdSAQEKDLDLK 1307
Cdd:pfam15921 441 ECQGQMERQmaaiqgknESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERT----VSDLTA---SLQEKERAIE 513
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1308 STH---IALKNEIDCLLQTNRSLQSEKEmllksreelcvSLANTANENQALKLRKDEMQTELETEREKLEKMTKdnmdlk 1384
Cdd:pfam15921 514 ATNaeiTKLRSRVDLKLQELQHLKNEGD-----------HLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQ------ 576
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1385 aslsslsnFLEEMKSSREASNSEKIHLLQEalfASEQRLlaEREELvnenkavteKLTKATADAVLAEtaFTEKINELNL 1464
Cdd:pfam15921 577 --------LVGQHGRTAGAMQVEKAQLEKE---INDRRL--ELQEF---------KILKDKKDAKIRE--LEARVSDLEL 632
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1465 EKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKR-----EQELDFSAKRL----------LVQEN 1529
Cdd:pfam15921 633 EKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRnfrnkSEEMETTTNKLkmqlksaqseLEQTR 712
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1530 TTLKySIEALEEELKKKNLENQELIACRSDLSDLLkeaQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTEL 1609
Cdd:pfam15921 713 NTLK-SMEGSDGHAMKVAMGMQKQITAKRGQIDAL---QSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKM 788
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359610 1610 QDKCQKLTGEVENMKENLTVEKKAriLDKESflLERMELQNNIGflEKEVEEMREKNKEFLTEKEL 1675
Cdd:pfam15921 789 AGELEVLRSQERRLKEKVANMEVA--LDKAS--LQFAECQDIIQ--RQEQESVRLKLQHTLDVKEL 848
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
468-1171 |
3.91e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 65.43 E-value: 3.91e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 468 NTQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVaelrgrLESSKHIDDVDTSL 547
Cdd:TIGR04523 74 NNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNKLEKQK------KENKKNIDKFLTEI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 548 SLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVielwkSK 627
Cdd:TIGR04523 148 KKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQI-----SE 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 628 LESAIASHQQAMEELKVSFNKgvgaQTAEFAELKTQMEKVKLDYENEMSNLKLKQeneksqhlKEIEALKAKLlevtEEK 707
Cdd:TIGR04523 223 LKKQNNQLKDNIEKKQQEINE----KTTEISNTQTQLNQLKDEQNKIKKQLSEKQ--------KELEQNNKKI----KEL 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 708 EQTLENLKAKLESVEDQhlvEMEDTLNKLQ-EAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDlaaLQKANSE 786
Cdd:TIGR04523 287 EKQLNQLKSEISDLNNQ---KEQDWNKELKsELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTN---SESENSE 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 787 GKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFT---S 863
Cdd:TIGR04523 361 KQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIknnS 440
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 864 AVDGAENAQRAMQETINKLNQK----EEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSG 939
Cdd:TIGR04523 441 EIKDLTNQDSVKELIIKNLDNTreslETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKIS 520
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 940 DSSAQLMKMNDELRLKERQLEQIQLELTKANE--KAVQLQKNVEQTAQKAEQsqqetLKTHQEELKKMQDQLTDMKKQME 1017
Cdd:TIGR04523 521 SLKEKIEKLESEKKEKESKISDLEDELNKDDFelKKENLEKEIDEKNKEIEE-----LKQTQKSLKKKQEEKQELIDQKE 595
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1018 TSQNQYKDLQAKYEKETSEMitkhdadikgfkqnlldaEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEI 1097
Cdd:TIGR04523 596 KEKKDLIKEIEEKEKKISSL------------------EKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIKEI 657
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024359610 1098 ELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAE 1171
Cdd:TIGR04523 658 RNKWPEIIKKIKESKTKIDDIIELMKDWLKELSLHYKKYITRMIRIKDLPKLEEKYKEIEKELKKLDEFSKELE 731
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
61-122 |
4.66e-10 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 65.09 E-value: 4.66e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024359610 61 VGERVWVNGNKpGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLRGIFTRP 122
Cdd:COG5244 6 VNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIFIRP 66
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1824-2095 |
8.47e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.19 E-value: 8.47e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1824 LALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEE 1903
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1904 ELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVtshQKLEEERSVLNNQLLEMKK 1983
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEEL---EEAEAELAEAEEALLEAEA 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1984 RESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQKLK 2063
Cdd:COG1196 373 ELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEA 452
|
250 260 270
....*....|....*....|....*....|..
gi 2024359610 2064 AKSEQPLTVTSPSGDIAANLLQDESAEDKQQE 2095
Cdd:COG1196 453 ELEEEEEALLELLAELLEEAALLEAALAELLE 484
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
666-1516 |
1.07e-09 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 64.22 E-value: 1.07e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 666 KVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEK-EQTLENLKAKLESVEDQHLVEMEDTLNKlqeaEIKVK 744
Cdd:pfam02463 166 RLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKkALEYYQLKEKLELEEEYLLYLDYLKLNE----ERIDL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 745 ELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTK 824
Cdd:pfam02463 242 LQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEK 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 825 ELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLT 904
Cdd:pfam02463 322 EKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKS 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 905 VMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDS------SAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQK 978
Cdd:pfam02463 402 EEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESielkqgKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVK 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 979 NVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDlQAKYEKETSEMITKHDADIKGFKQNLLDAEEA 1058
Cdd:pfam02463 482 LQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAH-GRLGDLGVAVENYKVAISTAVIVEVSATADEV 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1059 LKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMR-DLISEKETLAQERNTLKLEKESLLSQHLEMES 1137
Cdd:pfam02463 561 EERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQlDKATLEADEDDKRAKVVEGILKDTELTKLKES 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1138 KILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSES 1217
Cdd:pfam02463 641 AKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAE 720
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1218 TLLQQLKELQANKDAVDVACQKHIKEREELEhyqKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERD 1297
Cdd:pfam02463 721 ELLADRVQEAQDKINEELKLLKQKIDEEEEE---EEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLK 797
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1298 SAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMT 1377
Cdd:pfam02463 798 AQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEE 877
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1378 KdnmdLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTE 1457
Cdd:pfam02463 878 E----LEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEEN 953
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359610 1458 KINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQE 1516
Cdd:pfam02463 954 NKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAII 1012
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1219-1712 |
1.20e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 63.80 E-value: 1.20e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1219 LLQQLKELQANKDAVDVACQKHIKEREELEhyqKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDS 1298
Cdd:COG1196 237 LEAELEELEAELEELEAELEELEAELAELE---AELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1299 AQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTK 1378
Cdd:COG1196 314 LEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALR 393
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1379 DNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQE---------ALFASEQRLLAEREELVNENKAVTEKLTKATADAV 1449
Cdd:COG1196 394 AAAELAAQLEELEEAEEALLERLERLEEELEELEEAlaeleeeeeEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1450 LAETAFTEKINELNlEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQEN 1529
Cdd:COG1196 474 LLEAALAELLEELA-EAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIV 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1530 TTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAkQVLSSSFNTCSSDIEILNRERTEL 1609
Cdd:COG1196 553 VEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASD-LREADARYYVLGDTLLGRTLVAAR 631
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1610 QDKCQKLTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEE 1689
Cdd:COG1196 632 LEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAE 711
|
490 500
....*....|....*....|...
gi 2024359610 1690 VIKEKMILYKETEQLASKIEQLK 1712
Cdd:COG1196 712 AEEERLEEELEEEALEEQLEAER 734
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
666-1195 |
1.71e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 63.16 E-value: 1.71e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 666 KVKLDYENEMSNLK--LKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQEAEIKV 743
Cdd:PRK03918 169 EVIKEIKRRIERLEkfIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKE-VKELEELKEEIEELEKEL 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 744 ----KELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQ-----------------KANSEGKLEIQKLSEQLQAAE 802
Cdd:PRK03918 248 esleGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKekaeeyiklsefyeeylDELREIEKRLSRLEEEINGIE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 803 KQIQNLETEKvggsSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKdSLEKELQLLKEKFT--------SAVDGAENAQRA 874
Cdd:PRK03918 328 ERIKELEEKE----ERLEELKKKLKELEKRLEELEERHELYEEAK-AKKEELERLKKRLTgltpekleKELEELEKAKEE 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 875 MQETINKLNQKEEQFALMSSEL----EQLKS--------------------------NLTVMETKLKEREEREQQLTEAK 924
Cdd:PRK03918 403 IEEEISKITARIGELKKEIKELkkaiEELKKakgkcpvcgrelteehrkelleeytaELKRIEKELKEIEEKERKLRKEL 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 925 VKLENDIAEIMKSSgdssaQLMKMNDELRLKERQLEQIQLELTKANEKavqLQKNVEQTAQKAEqSQQETLKTHQEELKK 1004
Cdd:PRK03918 483 RELEKVLKKESELI-----KLKELAEQLKELEEKLKKYNLEELEKKAE---EYEKLKEKLIKLK-GEIKSLKKELEKLEE 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1005 MQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIK---GFKQNLLDAEEALKAAQKKNDELETQAEELKKQAE 1081
Cdd:PRK03918 554 LKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKelePFYNEYLELKDAEKELEREEKELKKLEEELDKAFE 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1082 QAKSLSSVLASARKEIELMS-----DKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEEL 1156
Cdd:PRK03918 634 ELAETEKRLEELRKELEELEkkyseEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKEL 713
|
570 580 590
....*....|....*....|....*....|....*....
gi 2024359610 1157 NSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEI 1195
Cdd:PRK03918 714 EKLEKALERVEELREKVKKYKALLKERALSKVGEIASEI 752
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1325-1911 |
1.80e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 63.16 E-value: 1.80e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1325 RSLQSEKEMLLKSREELCVSLANTANenqaLKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREAS 1404
Cdd:PRK03918 165 KNLGEVIKEIKRRIERLEKFIKRTEN----IEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEI 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1405 NSEKIHLLQ-EALFASEQRLLAEREELVNENKAVTEKLT---------KATADAVLAETAFTEKINELNLEKESVFSKSL 1474
Cdd:PRK03918 241 EELEKELESlEGSKRKLEEKIRELEERIEELKKEIEELEekvkelkelKEKAEEYIKLSEFYEEYLDELREIEKRLSRLE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1475 QFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENttlKYSIEALEEELKKKNLENQELI 1554
Cdd:PRK03918 321 EEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELE---RLKKRLTGLTPEKLEKELEELE 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1555 ACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSsdieILNRERTELQDK--CQKLTGEVENMKENL-TVEK 1631
Cdd:PRK03918 398 KAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCP----VCGRELTEEHRKelLEEYTAELKRIEKELkEIEE 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1632 KARILDKESFLLER-MELQNNIGFLEKEVEEMREKNKEFlteKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQ 1710
Cdd:PRK03918 474 KERKLRKELRELEKvLKKESELIKLKELAEQLKELEEKL---KKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEK 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1711 LKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLhE 1790
Cdd:PRK03918 551 LEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEEL-D 629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1791 KVVALLEQTDADF-SCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIhQE 1869
Cdd:PRK03918 630 KAFEELAETEKRLeELRKELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEER-EK 708
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 2024359610 1870 KIETLASLENSRQTNEKLQNELDMLKqnNLKNEEELTKSKEL 1911
Cdd:PRK03918 709 AKKELEKLEKALERVEELREKVKKYK--ALLKERALSKVGEI 748
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
357-1131 |
2.48e-09 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 63.07 E-value: 2.48e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 357 ALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEAADREKVELLNQLEEEK 436
Cdd:pfam02463 228 YLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLER 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 437 RKVEDLQFRVEEESITKGDLERKRQISEDPENTQTKLEHARIKELEqsllFEKTKADKLQRELEDTRVATVSEKSRIMEL 516
Cdd:pfam02463 308 RKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREA----EEEEEEELEKLQEKLEQLEEELLAKKKLES 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 517 ERDLALRVKEVAELRGRLESSKHIDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASN 596
Cdd:pfam02463 384 ERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKD 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 597 ERMGKENESLKTKLDHANKENSDVIELWKSKLESAIASHQQAMEELKVSFNKGVG---------AQTAEFAELKTQMEKV 667
Cdd:pfam02463 464 ELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDgvggriisaHGRLGDLGVAVENYKV 543
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 668 KLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVE--------DQHLVEMEDTLNKLQEA 739
Cdd:pfam02463 544 AISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEidpilnlaQLDKATLEADEDDKRAK 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 740 EIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKV 819
Cdd:pfam02463 624 VVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKK 703
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 820 SNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQ- 898
Cdd:pfam02463 704 KEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKt 783
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 899 -LKSNLTVMETKLKEREEREqqltEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQ 977
Cdd:pfam02463 784 eKLKVEEEKEEKLKAQEEEL----RALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERL 859
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 978 KNV----EQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLL 1053
Cdd:pfam02463 860 EEEitkeELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEE 939
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359610 1054 DAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQ 1131
Cdd:pfam02463 940 LLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQ 1017
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1656-2063 |
2.66e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 62.77 E-value: 2.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1656 EKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVM 1735
Cdd:PRK03918 188 TENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEER 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1736 LDELQHKYEVTEkEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQtdadfscrllvsegkhe 1815
Cdd:PRK03918 268 IEELKKEIEELE-EKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEER----------------- 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1816 llLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLaslensrqtnEKLQNELDMLK 1895
Cdd:PRK03918 330 --IKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTP----------EKLEKELEELE 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1896 QNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEEN-----VKLAEELGRSRDEVTSHQKLEEE 1970
Cdd:PRK03918 398 KAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHrkellEEYTAELKRIEKELKEIEEKERK 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1971 ---RSVLNNQLLEMKKRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLESD 2047
Cdd:PRK03918 478 lrkELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKK 557
|
410
....*....|....*.
gi 2024359610 2048 KLKLEEKVKNLEQKLK 2063
Cdd:PRK03918 558 LAELEKKLDELEEELA 573
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
687-1017 |
2.70e-09 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 62.61 E-value: 2.70e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 687 SQHLKEIEALKAKLLEVTEEKEQ----TLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKELDVLQakcneqtkligs 762
Cdd:PLN02939 102 MQRDEAIAAIDNEQQTNSKDGEQlsdfQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQ------------ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 763 ltQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLqaaEKQIQNLETEKVGGSSKVSNLTKELQgkeqkLLDLEkNLSa 842
Cdd:PLN02939 170 --GKINILEMRLSETDARIKLAAQEKIHVEILEEQL---EKLRNELLIRGATEGLCVHSLSKELD-----VLKEE-NML- 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 843 vnqvkdsLEKELQLLKEKFTSavdgaenaqraMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTE 922
Cdd:PLN02939 238 -------LKDDIQFLKAELIE-----------VAETEERVFKLEKERSLLDASLRELESKFIVAQEDVSKLSPLQYDCWW 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 923 AKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQiqlELTKAN------EKAVQLQKNVEQTAQKAEQSQQET-- 994
Cdd:PLN02939 300 EKVENLQDLLDRATNQVEKAALVLDQNQDLRDKVDKLEA---SLKEANvskfssYKVELLQQKLKLLEERLQASDHEIhs 376
|
330 340
....*....|....*....|....
gi 2024359610 995 -LKTHQEELKKMQDQLTDMKKQME 1017
Cdd:PLN02939 377 yIQLYQESIKEFQDTLSKLKEESK 400
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
493-1124 |
3.15e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 62.39 E-value: 3.15e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 493 DKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLESskhiddvdtslsllqeissLQEKMAAAGKEHQrEMS 572
Cdd:PRK03918 175 KRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPE-------------------LREELEKLEKEVK-ELE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 573 SLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIEL----WKSKLESAIASHQQAMEELKVSFNK 648
Cdd:PRK03918 235 ELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELkelkEKAEEYIKLSEFYEEYLDELREIEK 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 649 GVGAQTAEFAELKTQMEKVkldyeNEMSNLKLKQENEKSQHLKEIEALK--AKLLEVTEEKEQTLENLKAKLESVEdqhl 726
Cdd:PRK03918 315 RLSRLEEEINGIEERIKEL-----EEKEERLEELKKKLKELEKRLEELEerHELYEEAKAKKEELERLKKRLTGLT---- 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 727 veMEDTLNKLQEAEIKVKELdvlQAKCNEQTKLIGSLTQQIrasEEKLLDLAALQKANSEGKLEIQKLSEQlqaAEKQIQ 806
Cdd:PRK03918 386 --PEKLEKELEELEKAKEEI---EEEISKITARIGELKKEI---KELKKAIEELKKAKGKCPVCGRELTEE---HRKELL 454
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 807 NLETEKVggsskvSNLTKELQGKEQKLLDLEKNLSAVNQVkdsLEKELQLLKEKftSAVDGAENAQRAMQE-TINKLNQK 885
Cdd:PRK03918 455 EEYTAEL------KRIEKELKEIEEKERKLRKELRELEKV---LKKESELIKLK--ELAEQLKELEEKLKKyNLEELEKK 523
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 886 EEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLE 965
Cdd:PRK03918 524 AEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNE 603
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 966 LTKAnekavqlqknveQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMItkhdadi 1045
Cdd:PRK03918 604 YLEL------------KDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEEL------- 664
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359610 1046 kgfKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLE 1124
Cdd:PRK03918 665 ---REEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKYKALLKER 740
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1172-2024 |
3.65e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.39 E-value: 3.65e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1172 AKSRQESTEKVALISEKSkllSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDvACQKHIKEREELEHYQ 1251
Cdd:TIGR02169 152 PVERRKIIDEIAGVAEFD---RKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAE-RYQALLKEKREYEGYE 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1252 KL--LEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKS-THIALKNEIDCLLQTNRSLQ 1328
Cdd:TIGR02169 228 LLkeKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEeEQLRVKEKIGELEAEIASLE 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1329 SEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEM----KSSREAS 1404
Cdd:TIGR02169 308 RSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVdkefAETRDEL 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1405 NSEKIHLlqEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAEtaftEKINELNLEKESVFSKSLQFEKHNEALL 1484
Cdd:TIGR02169 388 KDYREKL--EKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIE----AKINELEEEKEDKALEIKKQEWKLEQLA 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1485 REKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELKK--------KNLENQELIAC 1556
Cdd:TIGR02169 462 ADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGvhgtvaqlGSVGERYATAI 541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1557 RSDLS------------------DLLKEAQDARRTL--------ENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQ 1610
Cdd:TIGR02169 542 EVAAGnrlnnvvveddavakeaiELLKRRKAGRATFlplnkmrdERRDLSILSEDGVIGFAVDLVEFDPKYEPAFKYVFG 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1611 DkcqklTGEVENMKENLTVEKKARILDKESFLLER-----------MELQNNIGFLEKEVEEMREKNKEFLTEKELLVQE 1679
Cdd:TIGR02169 622 D-----TLVVEDIEAARRLMGKYRMVTLEGELFEKsgamtggsrapRGGILFSRSEPAELQRLRERLEGLKRELSSLQSE 696
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1680 KEK--------------SETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDvhscvsvMLDELQHKYEV 1745
Cdd:TIGR02169 697 LRRienrldelsqelsdASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKS-------ELKELEARIEE 769
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1746 TEKEKMELVQENESLHAEwkslviINEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSCRLLvsegKHELLLEEMSNLA 1825
Cdd:TIGR02169 770 LEEDLHKLEEALNDLEAR------LSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTL----EKEYLEKEIQELQ 839
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1826 LKLREIErlqaqtfmqkfeaDKRAEevlqtmekVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEEL 1905
Cdd:TIGR02169 840 EQRIDLK-------------EQIKS--------IEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQL 898
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1906 TKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRS---RDEVTSHQKLEEERSVL---NNQLL 1979
Cdd:TIGR02169 899 RELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEElslEDVQAELQRVEEEIRALepvNMLAI 978
|
890 900 910 920
....*....|....*....|....*....|....*....|....*
gi 2024359610 1980 EMKKRESTLKKEIDEERASLQKSISDTSALItqkdEELEKLRNEI 2024
Cdd:TIGR02169 979 QEYEEVLKRLDELKEKRAKLEEERKAILERI----EEYEKKKREV 1019
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1401-2001 |
4.41e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 61.88 E-value: 4.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1401 REASNSEKIHLLQEALFASEQRL-LAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKH 1479
Cdd:COG1196 207 RQAEKAERYRELKEELKELEAELlLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEA 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1480 NEALLREKDELERKYSELLDEKKSLENAFSDMKREQEldfsAKRLLVQENTTLKYSIEALEEELKKKNLENQELIACRSD 1559
Cdd:COG1196 287 QAEEYELLAELARLEQDIARLEERRRELEERLEELEE----ELAELEEELEELEEELEELEEELEEAEEELEEAEAELAE 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1560 LSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTVEKKARILDKE 1639
Cdd:COG1196 363 AEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEE 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1640 SFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEvikekmilyKETEQLASKIEQLKSDFTSLS 1719
Cdd:COG1196 443 ALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAAR---------LLLLLEAEADYEGFLEGVKAA 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1720 VSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIineEILKEKeKLSKEYYKLHEKVVALLEQT 1799
Cdd:COG1196 514 LLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAI---EYLKAA-KAGRATFLPLDKIRARAALA 589
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1800 DADFSCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLEN 1879
Cdd:COG1196 590 AALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRE 669
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1880 SRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELgrsrd 1959
Cdd:COG1196 670 LLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEE----- 744
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 2024359610 1960 evtshqklEEERSVLNNQLLEMKKRESTLKKEIDEERASLQK 2001
Cdd:COG1196 745 --------EELLEEEALEELPEPPDLEELERELERLEREIEA 778
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
836-1031 |
5.52e-09 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 61.57 E-value: 5.52e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 836 LEKNLSAVNQVKDSLEKELQLLKEKftsaVDGAENAQRAMQETiNKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREE 915
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKE----LEEAEAALEEFRQK-NGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEA 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 916 REQQLTEAKVKLENDIAEIMkssgdSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVE-------------- 981
Cdd:COG3206 241 RLAALRAQLGSGPDALPELL-----QSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAalraqlqqeaqril 315
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 982 -------QTAQKAEQSQQETLKTHQEELKKM---QDQLTDMKKQMETSQNQYKDLQAKYE 1031
Cdd:COG3206 316 asleaelEALQAREASLQAQLAQLEARLAELpelEAELRRLEREVEVARELYESLLQRLE 375
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
913-1547 |
6.16e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 61.70 E-value: 6.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 913 REEREQQLTEAKVKLEND--IAEIMKSSGDSSAQLMKMNDELRLKE----RQLEQIQLELTKANEKAVQLQKNVEQTAQK 986
Cdd:PTZ00121 1194 RKAEDARKAEAARKAEEErkAEEARKAEDAKKAEAVKKAEEAKKDAeeakKAEEERNNEEIRKFEEARMAHFARRQAAIK 1273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 987 AEQSQQETLKTHQEELKKMQDqltdMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKN 1066
Cdd:PTZ00121 1274 AEEARKADELKKAEEKKKADE----AKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAK 1349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1067 DELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKEtlAQERNTLKLEKESLLSQHLEMESKILLVQQDR 1146
Cdd:PTZ00121 1350 AEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADE--AKKKAEEDKKKADELKKAAAAKKKADEAKKKA 1427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1147 EELwTKNEELnseNKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTllqQLKEL 1226
Cdd:PTZ00121 1428 EEK-KKADEA---KKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEA---KKKAD 1500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1227 QANKDAVDVACQKHIKEREELEHYQKLLEENDRviKDKDDVIQRLQSSYDDLARNQREL--LQEVSILTAERDSAQEKDL 1304
Cdd:PTZ00121 1501 EAKKAAEAKKKADEAKKAEEAKKADEAKKAEEA--KKADEAKKAEEKKKADELKKAEELkkAEEKKKAEEAKKAEEDKNM 1578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1305 DLKSTHIALKNEidcllqtnrslqsekemllKSREELCVSLANTANENQALKLRKDemqtelETEREKLEKMTKDNMDLK 1384
Cdd:PTZ00121 1579 ALRKAEEAKKAE-------------------EARIEEVMKLYEEEKKMKAEEAKKA------EEAKIKAEELKKAEEEKK 1633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1385 ASLSSLSNFLEEMKSSREASNSEKIHLLQealfASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNL 1464
Cdd:PTZ00121 1634 KVEQLKKKEAEEKKKAEELKKAEEENKIK----AAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKK 1709
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1465 EKESVFSKSLQFEKHNEALLREKDELERKYSElldEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELK 1544
Cdd:PTZ00121 1710 KEAEEKKKAEELKKAEEENKIKAEEAKKEAEE---DKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELD 1786
|
...
gi 2024359610 1545 KKN 1547
Cdd:PTZ00121 1787 EED 1789
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
427-1295 |
6.40e-09 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 61.60 E-value: 6.40e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 427 ELLNQLEEEKRKVED-LQFRVEEESITKGDLERKRQISEDPENTQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVA 505
Cdd:TIGR00606 210 KYLKQYKEKACEIRDqITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 506 TVSEKSRIMELErdlalRVKEVAELRGRLESSKHiddvdtslsllQEISSLQEKMAAAGKEhQREMSSLKEKFESSEEAL 585
Cdd:TIGR00606 290 LKMEKVFQGTDE-----QLNDLYHNHQRTVREKE-----------RELVDCQRELEKLNKE-RRLLNQEKTELLVEQGRL 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 586 RKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELwksKLESAIASHQQAMEELKVSFNKGVgaqtAEFAELKTQME 665
Cdd:TIGR00606 353 QLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSER---QIKNFHTLVIERQEDEAKTAAQLC----ADLQSKERLKQ 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 666 KVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTE---------EKEQTLENLKAKLESVEDQHLVEMEdtlnKL 736
Cdd:TIGR00606 426 EQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQlegssdrilELDQELRKAERELSKAEKNSLTETL----KK 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 737 QEAEIKVKELDVLQAKCNEQTKL------IGSLTQQIRASEEKLLDLAALQKANSEGKLEI-----------------QK 793
Cdd:TIGR00606 502 EVKSLQNEKADLDRKLRKLDQEMeqlnhhTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELtsllgyfpnkkqledwlHS 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 794 LSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDsLEKELQLLKEKFTSAvdgaeNAQR 873
Cdd:TIGR00606 582 KSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQD-EESDLERLKEEIEKS-----SKQR 655
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 874 AMQETINKL-NQKEEQFALMSSELEQLKSNLTVMETKLKE-REEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKM--- 948
Cdd:TIGR00606 656 AMLAGATAVySQFITQLTDENQSCCPVCQRVFQTEAELQEfISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLApgr 735
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 949 NDELRLKERQLEQIQLELTKANEKAVQLQKNVEQtaqkaeqsQQETLKTHQEELKKMQDQLTDMKKqMETSQNQYKDLQA 1028
Cdd:TIGR00606 736 QSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEE--------QETLLGTIMPEEESAKVCLTDVTI-MERFQMELKDVER 806
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1029 KYEKETSEMITKH-DADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDL 1107
Cdd:TIGR00606 807 KIAQQAAKLQGSDlDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQF 886
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1108 ISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELN-------SENKKILKQK------------E 1168
Cdd:TIGR00606 887 EEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNkkaqdkvNDIKEKVKNIhgymkdienkiqD 966
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1169 AAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDV--ACQKHIKEREE 1246
Cdd:TIGR00606 967 GKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVeeELKQHLKEMGQ 1046
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|....*
gi 2024359610 1247 LE------HYQKlLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAE 1295
Cdd:TIGR00606 1047 MQvlqmkqEHQK-LEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQFRDAE 1100
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
542-1264 |
6.95e-09 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 61.28 E-value: 6.95e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 542 DVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKfESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVI 621
Cdd:pfam05483 69 DFENSEGLSRLYSKLYKEAEKIKKWKVSIEAELKQK-ENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 622 E------LWKSKLESAIAS----------HQQAMEELKVSFNKGVGAQTAEFAELKTQMEKVKLDYenemsNLKLKQENE 685
Cdd:pfam05483 148 KennatrHLCNLLKETCARsaektkkyeyEREETRQVYMDLNNNIEKMILAFEELRVQAENARLEM-----HFKLKEDHE 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 686 KSQHLKEiealkaKLLEVTEEKEQTLENLKAKLESVEDQhlveMEDTLNKLQEAEIKVKELDvlqakcnEQTKLIGSLTQ 765
Cdd:pfam05483 223 KIQHLEE------EYKKEINDKEKQVSLLLIQITEKENK----MKDLTFLLEESRDKANQLE-------EKTKLQDENLK 285
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 766 QIRASEEKLLDLAALQKANSEGKLEIQK-LSEQLQAAEKQIQNLETEKvggSSKVSNLTKELQGKEQKLLDLEKNLSAVN 844
Cdd:pfam05483 286 ELIEKKDHLTKELEDIKMSLQRSMSTQKaLEEDLQIATKTICQLTEEK---EAQMEELNKAKAAHSFVVTEFEATTCSLE 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 845 QVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEeqfalmsSELEQLKSNLTVMETKLKEREEREQQLTEAK 924
Cdd:pfam05483 363 ELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKE-------VELEELKKILAEDEKLLDEKKQFEKIAEELK 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 925 VKLENDIAEIM---KSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQET------L 995
Cdd:pfam05483 436 GKEQELIFLLQareKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEAsdmtleL 515
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 996 KTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHD---ADIKGFKQNLLDAEEALKAAQKKNDELETQ 1072
Cdd:pfam05483 516 KKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDevkCKLDKSEENARSIEYEVLKKEKQMKILENK 595
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1073 AEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETlaqERNTLKLEKESLLSQHLEM----ESKILLVQQDREE 1148
Cdd:pfam05483 596 CNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEI---KVNKLELELASAKQKFEEIidnyQKEIEDKKISEEK 672
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1149 LWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKS----KLLSEIETAQADLLKITQENDALRSSESTLLQQLK 1224
Cdd:pfam05483 673 LLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVALMEKHKhqydKIIEERDSELGLYKNKEQEQSSAKAALEIELSNIK 752
|
730 740 750 760
....*....|....*....|....*....|....*....|.
gi 2024359610 1225 -ELQANKDAVDVacqkhikEREELEHYQKLLEENDRVIKDK 1264
Cdd:pfam05483 753 aELLSLKKQLEI-------EKEEKEKLKMEAKENTAILKDK 786
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1394-2060 |
7.67e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 61.31 E-value: 7.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1394 LEEMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAfTEKINELNLEKESVFSKS 1473
Cdd:PTZ00121 1214 AEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKA-EEARKADELKKAEEKKKA 1292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1474 LQFEKHNEAL----LREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELKKKNLE 1549
Cdd:PTZ00121 1293 DEAKKAEEKKkadeAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKK 1372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1550 NQEliaCRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTV 1629
Cdd:PTZ00121 1373 KEE---AKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEA 1449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1630 EKKARILDKESFLLERMELQNNIGFLEKEVEEMRE-----KNKEFLTEKELLVQEKEKSETKLEEVIKEKMilYKETEQL 1704
Cdd:PTZ00121 1450 KKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKadeakKKAEEAKKKADEAKKAAEAKKKADEAKKAEE--AKKADEA 1527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1705 ASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEK----MELVQENESLHAEWKSLVIINEEILKEKEK 1780
Cdd:PTZ00121 1528 KKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEedknMALRKAEEAKKAEEARIEEVMKLYEEEKKM 1607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1781 LSKEYYKLHEKVVALLEQTDADFSCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVT 1860
Cdd:PTZ00121 1608 KAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE 1687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1861 KEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQL 1940
Cdd:PTZ00121 1688 KKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEE 1767
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1941 AALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQ-----LLEMKKRESTLKKEIDEERASLQKSISDTSALITQKDE 2015
Cdd:PTZ00121 1768 KKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFdnfanIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEAD 1847
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 2024359610 2016 ELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQ 2060
Cdd:PTZ00121 1848 AFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEK 1892
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1128-1996 |
8.57e-09 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 61.14 E-value: 8.57e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1128 LLSQHLEMESKILLVQQDREElwtkNEELNSENKKILKQKEAAEAKS----RQESTEKVALISEKSKLLSEIETAQADLL 1203
Cdd:pfam02463 125 LESQGISPEAYNFLVQGGKIE----IIAMMKPERRLEIEEEAAGSRLkrkkKEALKKLIEETENLAELIIDLEELKLQEL 200
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1204 KIT-QENDALRSSESTLLQQLKELQANKDAVDVACQKHIKE-REELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARN 1281
Cdd:pfam02463 201 KLKeQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLlQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKE 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1282 QRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDE 1361
Cdd:pfam02463 281 KKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEE 360
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1362 MQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKS--SREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTE 1439
Cdd:pfam02463 361 LEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELElkSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIE 440
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1440 KLTKATADAVLAETAFTEKINELNLEKESVF------SKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKR 1513
Cdd:pfam02463 441 LKQGKLTEEKEELEKQELKLLKDELELKKSEdllketQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGV 520
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1514 EQELDFSAKRLLVQENTTLKYS---IEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSS 1590
Cdd:pfam02463 521 GGRIISAHGRLGDLGVAVENYKvaiSTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEID 600
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1591 SFNTCSSDIEILNRERTELQDKCQKlTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFL 1670
Cdd:pfam02463 601 PILNLAQLDKATLEADEDDKRAKVV-EGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQ 679
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1671 TEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEK 1750
Cdd:pfam02463 680 ELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKK 759
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1751 MELVQ------------ENESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSCRL--LVSEGKHEL 1816
Cdd:pfam02463 760 EEKEEekselslkekelAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEkiKEEELEELA 839
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1817 LLEEMSNLALKLREIErlqaqTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQ 1896
Cdd:pfam02463 840 LELKEEQKLEKLAEEE-----LERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEE 914
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1897 NNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQL----AALQEENVKLAEELGRSRDEVTSHQKLEEERS 1972
Cdd:pfam02463 915 KENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEeernKRLLLAKEELGKVNLMAIEEFEEKEERYNKDE 994
|
890 900
....*....|....*....|....
gi 2024359610 1973 VLNNQLLEMKKRESTLKKEIDEER 1996
Cdd:pfam02463 995 LEKERLEEEKKKLIRAIIEETCQR 1018
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1599-2113 |
1.02e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 60.85 E-value: 1.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1599 IEILNRERTELQDKCQKlTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMrEKNKEFLTEKELLVQ 1678
Cdd:PRK03918 171 IKEIKRRIERLEKFIKR-TENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKEL-EELKEEIEELEKELE 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1679 EKEKSETKLEEVIK--EKMI--LYKETEQLASKIEQLKS------DFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEK 1748
Cdd:PRK03918 249 SLEGSKRKLEEKIRelEERIeeLKKEIEELEEKVKELKElkekaeEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEE 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1749 EkmelVQENESLHAEWKSLVIINEEILKEKEKLsKEYYKLHEKVVALLEQTD---ADFSCR--------LLVSEGKHELL 1817
Cdd:PRK03918 329 R----IKELEEKEERLEELKKKLKELEKRLEEL-EERHELYEEAKAKKEELErlkKRLTGLtpeklekeLEELEKAKEEI 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1818 LEEMSNLALKLREIERLQAQ--TFMQKFEADKRA----------EEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNE 1885
Cdd:PRK03918 404 EEEISKITARIGELKKEIKElkKAIEELKKAKGKcpvcgrelteEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELR 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1886 KLQNELdmlkqnnlKNEEELTKSKELL----NLENK-------KVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEEL 1954
Cdd:PRK03918 484 ELEKVL--------KKESELIKLKELAeqlkELEEKlkkynleELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELK 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1955 GRSRDEVTSHQKLEEERSVLNNQLLEM-----KKRESTLK------------KEIDEERASLQKSISDTSALITQKDEEL 2017
Cdd:PRK03918 556 KKLAELEKKLDELEEELAELLKELEELgfesvEELEERLKelepfyneylelKDAEKELEREEKELKKLEEELDKAFEEL 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 2018 EKLRNEITVLRGENASAKTLQSV--VKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSGDIAANLlqdESAEDKQQE 2095
Cdd:PRK03918 636 AETEKRLEELRKELEELEKKYSEeeYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEEL---EEREKAKKE 712
|
570
....*....|....*...
gi 2024359610 2096 IDFLNSVIVDLQRRNEEL 2113
Cdd:PRK03918 713 LEKLEKALERVEELREKV 730
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
949-1174 |
1.02e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 59.78 E-value: 1.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 949 NDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQE------TLKTHQEELKKMQDQLTDMKKQMETSQNQ 1022
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRiaalarRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1023 YKDLQAKYEKETSEMITKHDADIKGF---KQNLLDAEEALKAAQKKNDELETQAEELKKQAEQakslssvLASARKEIEL 1099
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAE-------LAALRAELEA 171
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024359610 1100 MSDKMRDLISEKETLAQERNTLKLEKESLLSQhleMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKS 1174
Cdd:COG4942 172 ERAELEALLAELEEERAALEALKAERQKLLAR---LEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERT 243
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
987-1232 |
1.05e-08 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 60.42 E-value: 1.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 987 AEQSQQETLKTHQEELKK----MQDQLTDMKKQMETSQNQYKDLQAKYeketsemitkhdadikgfkqNLLDAEEALKAA 1062
Cdd:COG3206 158 AEAYLEQNLELRREEARKalefLEEQLPELRKELEEAEAALEEFRQKN--------------------GLVDLSEEAKLL 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1063 QKKNDELETQAEELKKQAEQAKSLssvLASARKEIELMSDKMRDLISEKE--TLAQERNTLKLEKESLLSQHLEMESKIL 1140
Cdd:COG3206 218 LQQLSELESQLAEARAELAEAEAR---LAALRAQLGSGPDALPELLQSPViqQLRAQLAELEAELAELSARYTPNHPDVI 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1141 LVQQDREELwtkNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLL 1220
Cdd:COG3206 295 ALRAQIAAL---RAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLL 371
|
250
....*....|..
gi 2024359610 1221 QQLKELQANKDA 1232
Cdd:COG3206 372 QRLEEARLAEAL 383
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
653-1626 |
1.08e-08 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 60.83 E-value: 1.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 653 QTAEFAELKTQMEKVKLDY-----ENEMSNLKLKQENEKSQHLKEI----EALKAKLLEVTEEKEQTLENLKAKLESVED 723
Cdd:TIGR00606 180 SATRYIKALETLRQVRQTQgqkvqEHQMELKYLKQYKEKACEIRDQitskEAQLESSREIVKSYENELDPLKNRLKEIEH 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 724 Q--HLVEMEDTLNKLQEAEIKVKeldvlqakcNEQTKLIGSLTQQIRASEEKLLDLAALQKAnsegklEIQKLSEQLQAA 801
Cdd:TIGR00606 260 NlsKIMKLDNEIKALKSRKKQME---------KDNSELELKMEKVFQGTDEQLNDLYHNHQR------TVREKERELVDC 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 802 EKQIQNLETEKVGGSSKVSNLTKElQGKEQklldleknLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINK 881
Cdd:TIGR00606 325 QRELEKLNKERRLLNQEKTELLVE-QGRLQ--------LQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNF 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 882 LNQKEEQFALMSSELEQLKSNLTvmetklkereEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQ 961
Cdd:TIGR00606 396 HTLVIERQEDEAKTAAQLCADLQ----------SKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQ 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 962 IQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLtDMKKQMETSQNQYKDLQAKYEKETsEMITKH 1041
Cdd:TIGR00606 466 LEGSSDRILELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADL-DRKLRKLDQEMEQLNHHTTTRTQM-EMLTKD 543
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1042 DADikgfkqnllDAEEALKAAQKKNDELETQAEELKKQaeqaKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTL 1121
Cdd:TIGR00606 544 KMD---------KDEQIRKIKSRHSDELTSLLGYFPNK----KQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHI 610
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1122 KLEKESLLSQHLEMESKILlvqqdrEELWTKNEELNSENKKilkqkeaaeaKSRQESTEKVALISEKSKLLSEIETaqad 1201
Cdd:TIGR00606 611 NNELESKEEQLSSYEDKLF------DVCGSQDEESDLERLK----------EEIEKSSKQRAMLAGATAVYSQFIT---- 670
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1202 llKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARN 1281
Cdd:TIGR00606 671 --QLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPE 748
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1282 QRELLQEVSILTAERDSAQEKDLDLKSThIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLAnTANENQALKLRKDE 1361
Cdd:TIGR00606 749 LRNKLQKVNRDIQRLKNDIEEQETLLGT-IMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQA-AKLQGSDLDRTVQQ 826
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1362 MQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEAlfaseQRLLAEREELVNENKAVTEkL 1441
Cdd:TIGR00606 827 VNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNL-----QRRQQFEEQLVELSTEVQS-L 900
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1442 TKATADAVLAETAFTEKINELNLEKESVFSKSlqfEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQeldfsa 1521
Cdd:TIGR00606 901 IREIKDAKEQDSPLETFLEKDQQEKEELISSK---ETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDY------ 971
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1522 krlLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSdllkEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEI 1601
Cdd:TIGR00606 972 ---LKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDID----TQKIQERWLQDNLTLRKRENELKEVEEELKQHLKEM 1044
|
970 980
....*....|....*....|....*
gi 2024359610 1602 LNRERTELQDKCQKLTGEVENMKEN 1626
Cdd:TIGR00606 1045 GQMQVLQMKQEHQKLEENIDLIKRN 1069
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
352-860 |
1.16e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.72 E-value: 1.16e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 352 TALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRdghdRHVLEMEAKMDQLRAMVEAADREKVELLNQ 431
Cdd:COG1196 284 EEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELE----EELEELEEELEELEEELEEAEEELEEAEAE 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 432 LEEEKRKVEDLQFRVEEESitkGDLERKRQISEDPENTQTKLEhARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKS 511
Cdd:COG1196 360 LAEAEEALLEAEAELAEAE---EELEELAEELLEALRAAAELA-AQLEELEEAEEALLERLERLEEELEELEEALAELEE 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 512 RIMELERDLALRVKEVAElrgrlesskhiddvdtslsLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKT 591
Cdd:COG1196 436 EEEEEEEALEEAAEEEAE-------------------LEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLL 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 592 LSASNERMGKENESLKTKLDHANKENS---DVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFAeLKTQMEKVK 668
Cdd:COG1196 497 LEAEADYEGFLEGVKAALLLAGLRGLAgavAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYL-KAAKAGRAT 575
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 669 LDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENlkAKLESVEDQHLVEMEDTLNKLQEAEIKVKELD- 747
Cdd:COG1196 576 FLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGD--TLLGRTLVAARLEAALRRAVTLAGRLREVTLEg 653
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 748 ---------VLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSK 818
Cdd:COG1196 654 eggsaggslTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAE 733
|
490 500 510 520
....*....|....*....|....*....|....*....|..
gi 2024359610 819 VSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEK 860
Cdd:COG1196 734 REELLEELLEEEELLEEEALEELPEPPDLEELERELERLERE 775
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1598-1955 |
1.18e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.72 E-value: 1.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1598 DIEILNRERTELQDKCQKLTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLV 1677
Cdd:COG1196 187 NLERLEDILGELERQLEPLERQAEKAERYRELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1678 QEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVhscvsvmLDELQHKYEVTEKEKMELVQEN 1757
Cdd:COG1196 267 AELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEER-------LEELEEELAELEEELEELEEEL 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1758 ESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQTDAdfscrllvsegkhelLLEEMSNLALKLREIERLQAQ 1837
Cdd:COG1196 340 EELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEE---------------LAEELLEALRAAAELAAQLEE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1838 TFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENK 1917
Cdd:COG1196 405 LEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLE 484
|
330 340 350
....*....|....*....|....*....|....*...
gi 2024359610 1918 KVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELG 1955
Cdd:COG1196 485 ELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGL 522
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
840-1094 |
1.30e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 59.39 E-value: 1.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 840 LSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQ 919
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 920 LTEAKVKLENDIAEImkssgdssaqlmkmndeLRLKERQLEQIQLELTKANEKAVQLQKNVE--QTAQKAEQSQQETLKT 997
Cdd:COG4942 95 LRAELEAQKEELAEL-----------------LRALYRLGRQPPLALLLSPEDFLDAVRRLQylKYLAPARREQAEELRA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 998 HQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEmitkHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELK 1077
Cdd:COG4942 158 DLAELAALRAELEAERAELEALLAELEEERAALEALKAE----RQKLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
250
....*....|....*..
gi 2024359610 1078 KQAEQAKSLSSVLASAR 1094
Cdd:COG4942 234 AEAAAAAERTPAAGFAA 250
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
406-1254 |
1.57e-08 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 60.19 E-value: 1.57e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 406 EMEAKMDQLRAMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEdpentqtklehARIKELEQSL 485
Cdd:pfam01576 72 ELEEILHELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTE-----------AKIKKLEEDI 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 486 LFEKTKADKLQRELEDTrvatvseKSRIMELERDLA---LRVKEVAELRGRLESSkhiddvdtslsllqeISSLQEKMAA 562
Cdd:pfam01576 141 LLLEDQNSKLSKERKLL-------EERISEFTSNLAeeeEKAKSLSKLKNKHEAM---------------ISDLEERLKK 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 563 AGKEHQrEMSSLKEKFESSEEALRKEIKTLSASNE----RMGKENESLKTKLDHANKENSDVIELWKS--KLESAIASHQ 636
Cdd:pfam01576 199 EEKGRQ-ELEKAKRKLEGESTDLQEQIAELQAQIAelraQLAKKEEELQAALARLEEETAQKNNALKKirELEAQISELQ 277
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 637 QAMEELKVSFNKGVGAQ---TAEFAELKTQME----------KVKLDYENEMSNLKLKQENEKSQHLKEIEALKAK---- 699
Cdd:pfam01576 278 EDLESERAARNKAEKQRrdlGEELEALKTELEdtldttaaqqELRSKREQEVTELKKALEEETRSHEAQLQEMRQKhtqa 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 700 LLEVTEEKEQT------LENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKELDV----LQAKCNEQTKLIGSLTQQIRA 769
Cdd:pfam01576 358 LEELTEQLEQAkrnkanLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGqlqeLQARLSESERQRAELAEKLSK 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 770 SEEKLLD----LAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQ 845
Cdd:pfam01576 438 LQSELESvsslLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVER 517
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 846 VKDSLEKELQLLKEK---FTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTE 922
Cdd:pfam01576 518 QLSTLQAQLSDMKKKleeDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVS 597
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 923 AKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTaQKAEQSQQETLKTHQEEL 1002
Cdd:pfam01576 598 NLEKKQKKFDQMLAEEKAISARYAEERDRAEAEAREKETRALSLARALEEALEAKEELERT-NKQLRAEMEDLVSSKDDV 676
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1003 KK-----------MQDQLTDMKKQMETSQNQYK---DLQAKYEKETSEMITKHDADIKGFKQNlldAEEALKAAQKKNDE 1068
Cdd:pfam01576 677 GKnvhelerskraLEQQVEEMKTQLEELEDELQateDAKLRLEVNMQALKAQFERDLQARDEQ---GEEKRRQLVKQVRE 753
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1069 LETQAEELKKQAEQA-----------KSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMES 1137
Cdd:pfam01576 754 LEAELEDERKQRAQAvaakkkleldlKELEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEARASRDEILAQSKESEK 833
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1138 KILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSES 1217
Cdd:pfam01576 834 KLKNLEAELLQLQEDLAASERARRQAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSNTELLNDRLR 913
|
890 900 910
....*....|....*....|....*....|....*..
gi 2024359610 1218 TLLQQLKELQANKDAVDVACQKHIKEREELEHYQKLL 1254
Cdd:pfam01576 914 KSTLQVEQLTTELAAERSTSQKSESARQQLERQNKEL 950
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1492-2059 |
1.58e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.34 E-value: 1.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1492 RKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTtlkysIEALEEELKKKNLENQELIACRSDLSDLLKEAQDAR 1571
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEELEAE-----LEELEAELAELEAELEELRLELEELELELEEAQAEE 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1572 RTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTVEKKARILDKESFLLERMELQNn 1651
Cdd:COG1196 291 YELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLE- 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1652 igfLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSC 1731
Cdd:COG1196 370 ---AEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEE 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1732 VSVMLDELQHKYEVTEKEKMELVQENESLHAEWKSLvIINEEILKEKEKLSKEYYKLHE------KVVALLEQTDADFSC 1805
Cdd:COG1196 447 AAEEEAELEEEEEALLELLAELLEEAALLEAALAEL-LEELAEAAARLLLLLEAEADYEgflegvKAALLLAGLRGLAGA 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1806 RLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNE 1885
Cdd:COG1196 526 VAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVA 605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1886 KLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLA-ALQEENVKLAEELGRSRDEVTSH 1964
Cdd:COG1196 606 SDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSlTGGSRRELLAALLEAEAELEELA 685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1965 QKLEEERSVLNNQLLEMKKRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTL 2044
Cdd:COG1196 686 ERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEEL 765
|
570
....*....|....*
gi 2024359610 2045 ESDKLKLEEKVKNLE 2059
Cdd:COG1196 766 ERELERLEREIEALG 780
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
820-1383 |
1.64e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 60.05 E-value: 1.64e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 820 SNLTKELQGKEQKllDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQramqETINKLNQKEEQFALMSSELEQL 899
Cdd:PRK02224 190 DQLKAQIEEKEEK--DLHERLNGLESELAELDEEIERYEEQREQARETRDEAD----EVLEEHEERREELETLEAEIEDL 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 900 KSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKN 979
Cdd:PRK02224 264 RETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 980 VEQTAQKAEQSQQETlKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEkETSEMITKHDADIKGFKQNLLDAEEAL 1059
Cdd:PRK02224 344 AESLREDADDLEERA-EELREEAAELESELEEAREAVEDRREEIEELEEEIE-ELRERFGDAPVDLGNAEDFLEELREER 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1060 KAAQKKNDELETQAEELKKQAEQAKSL----------SSVLASARKE-IELMSDKMRDLISEKETLAQERNTLKlEKESL 1128
Cdd:PRK02224 422 DELREREAELEATLRTARERVEEAEALleagkcpecgQPVEGSPHVEtIEEDRERVEELEAELEDLEEEVEEVE-ERLER 500
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1129 LSQHLEMESKILLVQQDREELwtknEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQE 1208
Cdd:PRK02224 501 AEDLVEAEDRIERLEERREDL----EELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAE 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1209 NDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDD----LARNQRE 1284
Cdd:PRK02224 577 LNSKLAELKERIESLERIRTLLAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEarieEAREDKE 656
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1285 LLQE-VSILTAERDSAQEKDLDLKSTHIALKNEIDCLlqtnRSLQSEKEMLLKSREELcVSLANTANENQAL--KLRKDE 1361
Cdd:PRK02224 657 RAEEyLEQVEEKLDELREERDDLQAEIGAVENELEEL----EELRERREALENRVEAL-EALYDEAEELESMygDLRAEL 731
|
570 580
....*....|....*....|..
gi 2024359610 1362 MQTELETerekLEKMTKDNMDL 1383
Cdd:PRK02224 732 RQRNVET----LERMLNETFDL 749
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
575-1226 |
2.05e-08 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 59.98 E-value: 2.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 575 KEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELwkSKLESAIASHQQAMEELKVSfnkgvgAQT 654
Cdd:TIGR00618 221 KQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARI--EELRAQEAVLEETQERINRA------RKA 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 655 AEFAELKTQMEKVKLDYENEMSNLKlKQENEKSQHLKEIEALKAKLLEVtEEKEQTLENLKAKLESVEDQHLV------- 727
Cdd:TIGR00618 293 APLAAHIKAVTQIEQQAQRIHTELQ-SKMRSRAKLLMKRAAHVKQQSSI-EEQRRLLQTLHSQEIHIRDAHEVatsirei 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 728 ---EMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQ 804
Cdd:TIGR00618 371 scqQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCT 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 805 IQNLETEK---VGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFT------SAVDGAENAQRAM 875
Cdd:TIGR00618 451 AQCEKLEKihlQESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIhpnparQDIDNPGPLTRRM 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 876 QETINKLNQKEEQFALMSSELEQLKSNLTvmetKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMND-ELRL 954
Cdd:TIGR00618 531 QRGEQTYAQLETSEEDVYHQLTSERKQRA----SLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEkLSEA 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 955 KERQLEQIQLELTKANEKAVQLQKNVEQtAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDL-QAKYEKE 1033
Cdd:TIGR00618 607 EDMLACEQHALLRKLQPEQDLQDVRLHL-QQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASrQLALQKM 685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1034 TSEmitkhdadikgfKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQaksLSSVLASARKEIELMSDKMRDLISEKE- 1112
Cdd:TIGR00618 686 QSE------------KEQLTYWKEMLAQCQTLLRELETHIEEYDREFNE---IENASSSLGSDLAAREDALNQSLKELMh 750
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1113 ---------TLAQERNTLKLEKESLLSQHL-----EMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQES 1178
Cdd:TIGR00618 751 qartvlkarTEAHFNNNEEVTAALQTGAELshlaaEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEE 830
|
650 660 670 680
....*....|....*....|....*....|....*....|....*...
gi 2024359610 1179 TEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKEL 1226
Cdd:TIGR00618 831 EQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKIIQLSDKL 878
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
515-1230 |
2.18e-08 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 59.45 E-value: 2.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 515 ELERDLALRVKEVAELRGRLESSKHIDDVDTSLSL----LQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIK 590
Cdd:pfam10174 40 ELKKERALRKEEAARISVLKEQYRVTQEENQHLQLtiqaLQDELRAQRDLNQLLQQDFTTSPVDGEDKFSTPELTEENFR 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 591 TLSASNERMGKENESLKTKLDHANKEnsdvIELWKSKLESAIASHQQAMEELK--------VSFNKGVGAQTAEfAELKT 662
Cdd:pfam10174 120 RLQSEHERQAKELFLLRKTLEEMELR----IETQKQTLGARDESIKKLLEMLQskglpkksGEEDWERTRRIAE-AEMQL 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 663 QMEKVKLDyENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIK 742
Cdd:pfam10174 195 GHLEVLLD-QKEKENIHLREELHRRNQLQPDPAKTKALQTVIEMKDTKISSLERNIRDLEDEVQMLKTNGLLHTEDREEE 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 743 VKELDVLQAKCNEQTKLIGSLTQQIRASEEKLL----DLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEkvggssk 818
Cdd:pfam10174 274 IKQMEVYKSHSKFMKNKIDQLKQELSKKESELLalqtKLETLTNQNSDCKQHIEVLKESLTAKEQRAAILQTE------- 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 819 VSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQ 898
Cdd:pfam10174 347 VDALRLRLEEKESFLNKKTKQLQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAGLKERVKS 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 899 LKSN-------LTVMETKLKEREE-----REQQLTEAKVKLEnDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLEL 966
Cdd:pfam10174 427 LQTDssntdtaLTTLEEALSEKERiierlKEQREREDRERLE-ELESLKKENKDLKEKVSALQPELTEKESSLIDLKEHA 505
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 967 T-------KANEKAVQLQKNVEQTAQKAEQSQQETLKTHQ-EELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEM- 1037
Cdd:pfam10174 506 SslassglKKDSKLKSLEIAVEQKKEECSKLENQLKKAHNaEEAVRTNPEINDRIRLLEQEVARYKEESGKAQAEVERLl 585
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1038 -ITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSsVLASARKEIELMSDKMRDLISEKETLAQ 1116
Cdd:pfam10174 586 gILREVENEKNDKDKKIAELESLTLRQMKEQNKKVANIKHGQQEMKKKGAQ-LLEEARRREDNLADNSQQLQLEELMGAL 664
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1117 ERNTLKLEkesllsqhlEMESKILLVQQDREELWTKNEELNSENKKILKqkEAAEAKsrQESTekVALISEKSKLLSEIE 1196
Cdd:pfam10174 665 EKTRQELD---------ATKARLSSTQQSLAEKDGHLTNLRAERRKQLE--EILEMK--QEAL--LAAISEKDANIALLE 729
|
730 740 750
....*....|....*....|....*....|....
gi 2024359610 1197 TAQADLLKITQENDALRSSESTLLQQLKELQANK 1230
Cdd:pfam10174 730 LSSSKKKKTQEEVMALKREKDRLVHQLKQQTQNR 763
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
590-1015 |
2.48e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 59.70 E-value: 2.48e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 590 KTLSASNERMGKENESLKTKLDHANKEnsdvielwKSKLESAIASHQQAMEELKvsfnKGVGAQTAEFAELKTQMEKVKL 669
Cdd:TIGR02169 670 RSEPAELQRLRERLEGLKRELSSLQSE--------LRRIENRLDELSQELSDAS----RKIGEIEKEIEQLEQEEEKLKE 737
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 670 DYENEMSNLKlkqenEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQhlvemedtlnklqEAEIKVKELDVL 749
Cdd:TIGR02169 738 RLEELEEDLS-----SLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEAR-------------LSHSRIPEIQAE 799
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 750 QAKCNEQTKLIGSLTQQIRASEEKL-LDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKvggsskvSNLTKELQG 828
Cdd:TIGR02169 800 LSKLEEEVSRIEARLREIEQKLNRLtLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKK-------EELEEELEE 872
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 829 KEQKLLDLEKNLSAVNQVKDSLEKELqllkekftsavdgaenaqRAMQETINKLNqkeeqfalmsSELEQLKSNLTVMET 908
Cdd:TIGR02169 873 LEAALRDLESRLGDLKKERDELEAQL------------------RELERKIEELE----------AQIEKKRKRLSELKA 924
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 909 KLKEREEREQQLTEAKVKLENDIAEIMkSSGDSSAQLMKMNDELRlkerqleqiqlELTKANEKAVQLQKNVEQTaQKAE 988
Cdd:TIGR02169 925 KLEALEEELSEIEDPKGEDEEIPEEEL-SLEDVQAELQRVEEEIR-----------ALEPVNMLAIQEYEEVLKR-LDEL 991
|
410 420
....*....|....*....|....*..
gi 2024359610 989 QSQQETLKTHQEELKKMQDQLTDMKKQ 1015
Cdd:TIGR02169 992 KEKRAKLEEERKAILERIEEYEKKKRE 1018
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
835-2133 |
3.66e-08 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 59.29 E-value: 3.66e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 835 DLEKNLSAVNQVKdsleKELQLLKEkFTSAVDGAENAQRAMQETINKLNQKEEQF--ALMSSELEQ-LKSNLTVM----E 907
Cdd:TIGR01612 484 DIDENSKQDNTVK----LILMRMKD-FKDIIDFMELYKPDEVPSKNIIGFDIDQNikAKLYKEIEAgLKESYELAknwkK 558
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 908 TKLKEREEREQQlTEAKVKLENDIAEIMKssgdssaQLMKMNDEL----RLKERQLEQIQlELTKANE---KAVQLQKNV 980
Cdd:TIGR01612 559 LIHEIKKELEEE-NEDSIHLEKEIKDLFD-------KYLEIDDEIiyinKLKLELKEKIK-NISDKNEyikKAIDLKKII 629
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 981 EQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKqmETSQNQYKDLQAKYeKETSEMITKHDADIKGFKQNLLDAEEALK 1060
Cdd:TIGR01612 630 ENNNAYIDELAKISPYQVPEHLKNKDKIYSTIKS--ELSKIYEDDIDALY-NELSSIVKENAIDNTEDKAKLDDLKSKID 706
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1061 AAQKKNDELETQAEELkkqaeqakSLSSvlasarkeIELMSDKMRDLISE--KETLAQERNTLKLEKESLLSQHLEMESK 1138
Cdd:TIGR01612 707 KEYDKIQNMETATVEL--------HLSN--------IENKKNELLDIIVEikKHIHGEINKDLNKILEDFKNKEKELSNK 770
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1139 IllvqqdrEELWTKNEELNSENKKILKQKEAAEAKSRQEST--EKVALISEKSK-LLSEIETAQADLLKITQEndalrss 1215
Cdd:TIGR01612 771 I-------NDYAKEKDELNKYKSKISEIKNHYNDQINIDNIkdEDAKQNYDKSKeYIKTISIKEDEIFKIINE------- 836
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1216 estlLQQLKELQANKDAVDVACQKHIKEREELEHYQKlleeNDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSiltae 1295
Cdd:TIGR01612 837 ----MKFMKDDFLNKVDKFINFENNCKEKIDSEHEQF----AELTNKIKAEISDDKLNDYEKKFNDSKSLINEIN----- 903
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1296 rdSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEK 1375
Cdd:TIGR01612 904 --KSIEEEYQNINTLKKVDEYIKICENTKESIEKFHNKQNILKEILNKNIDTIKESNLIEKSYKDKFDNTLIDKINELDK 981
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1376 MTKDnmdlkASLSSLsnfleemkssrEASNSEKIHL---LQEALFASEQRLL----AEREELVNEnkaVTEKLTKATADA 1448
Cdd:TIGR01612 982 AFKD-----ASLNDY-----------EAKNNELIKYfndLKANLGKNKENMLyhqfDEKEKATND---IEQKIEDANKNI 1042
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1449 VLAETAFTEKINELNLEKESVFSKSLqfEKHNEALLREKDELERKYSELlDEKKSLENaFSDMKREQELDFS-----AKR 1523
Cdd:TIGR01612 1043 PNIEIAIHTSIYNIIDEIEKEIGKNI--ELLNKEILEEAEINITNFNEI-KEKLKHYN-FDDFGKEENIKYAdeinkIKD 1118
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1524 LLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEA------QDARRTLENELAAVSHAKQVLSSsFNTCSS 1597
Cdd:TIGR01612 1119 DIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLEDVADKAisnddpEEIEKKIENIVTKIDKKKNIYDE-IKKLLN 1197
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1598 DIEILNRERTELQdkcqkltgEVENMkeNLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMRE-KNKEFLTEKELL 1676
Cdd:TIGR01612 1198 EIAEIEKDKTSLE--------EVKGI--NLSYGKNLGKLFLEKIDEEKKKSEHMIKAMEAYIEDLDEiKEKSPEIENEMG 1267
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1677 VQEKEKSETKLEEV----IKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDV--------------HSCVSVMLDE 1738
Cdd:TIGR01612 1268 IEMDIKAEMETFNIshddDKDHHIISKKHDENISDIREKSLKIIEDFSEESDINDIkkelqknlldaqkhNSDINLYLNE 1347
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1739 LQHKYEVTEKEKM--------ELVQENESLHAEWKSLVIINEEILKE-KEKLSKEYYKlhEKVVALLEQTDADfSCRLLV 1809
Cdd:TIGR01612 1348 IANIYNILKLNKIkkiidevkEYTKEIEENNKNIKDELDKSEKLIKKiKDDINLEECK--SKIESTLDDKDID-ECIKKI 1424
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1810 SEGKHELLLEEMSNLAL--KLREIERLQAQTFMQKFEADKRAEEVLQTmekvtkEKDAIHQEKIETLASLENSRQTNEKL 1887
Cdd:TIGR01612 1425 KELKNHILSEESNIDTYfkNADENNENVLLLFKNIEMADNKSQHILKI------KKDNATNDHDFNINELKEHIDKSKGC 1498
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1888 QNELDmlkqnnlKNEEELTKSKELLNLENKKVEELKKEFEALKLaaaqkSQQLAALQEENVKLAEELGRSRDEVTshqkL 1967
Cdd:TIGR01612 1499 KDEAD-------KNAKAIEKNKELFEQYKKDVTELLNKYSALAI-----KNKFAKTKKDSEIIIKEIKDAHKKFI----L 1562
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1968 EEERSvlNNQLLEMKKRESTLKKEIDEERASLQKSISDTSALitqkdEELEKLRNEITVLRGE-NASAKTLQSVVKTLES 2046
Cdd:TIGR01612 1563 EAEKS--EQKIKEIKKEKFRIEDDAAKNDKSNKAAIDIQLSL-----ENFENKFLKISDIKKKiNDCLKETESIEKKISS 1635
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 2047 DKLKLEekvknlEQKLKAKSEQPLTVTSPSGDIAAnllQDESAEDKQQEIDFLNSVI------VDLQRRNEELNLkIQRM 2120
Cdd:TIGR01612 1636 FSIDSQ------DTELKENGDNLNSLQEFLESLKD---QKKNIEDKKKELDELDSEIekieidVDQHKKNYEIGI-IEKI 1705
|
1370
....*....|....
gi 2024359610 2121 CEAAL-NGNEEETI 2133
Cdd:TIGR01612 1706 KEIAIaNKEEIESI 1719
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1542-2067 |
6.82e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 58.15 E-value: 6.82e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1542 ELKKKNLENQELIACRSDLSDLLKEAqdarrtlENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTgevE 1621
Cdd:PRK03918 173 EIKRRIERLEKFIKRTENIEELIKEK-------EKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIE---E 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1622 NMKENLTVEKKARILDKESFLLERM--ELQNNIGFLE---KEVEEMREKNKEFLTEKELLVQ------EKEKSETKLEEV 1690
Cdd:PRK03918 243 LEKELESLEGSKRKLEEKIRELEERieELKKEIEELEekvKELKELKEKAEEYIKLSEFYEEyldelrEIEKRLSRLEEE 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1691 IKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSC---VSVMLDELQ-HKYEVTEKEKMELVQENESLHAEWKS 1766
Cdd:PRK03918 323 INGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELyeeAKAKKEELErLKKRLTGLTPEKLEKELEELEKAKEE 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1767 lviINEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSC----RLLVSEGKHELLLE---EMSNLALKLREIERLQAQTF 1839
Cdd:PRK03918 403 ---IEEEISKITARIGELKKEIKELKKAIEELKKAKGKCpvcgRELTEEHRKELLEEytaELKRIEKELKEIEEKERKLR 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1840 MQKFEADK--RAEEVLQTMEKVTKEKDAIHQE-KIETLASLENSRQTNEKLQNELDMLK------QNNLKNEEELTKSKE 1910
Cdd:PRK03918 480 KELRELEKvlKKESELIKLKELAEQLKELEEKlKKYNLEELEKKAEEYEKLKEKLIKLKgeikslKKELEKLEELKKKLA 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1911 LLNLENKKVEELKKEFEALKLAAAQKS--------QQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMK 1982
Cdd:PRK03918 560 ELEKKLDELEEELAELLKELEELGFESveeleerlKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETE 639
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1983 KRESTLKKEIDEerasLQKSISDTSalITQKDEELEKLRNEITVLRGE----NASAKTLQSVVKTLESDKLKLEEKVKNL 2058
Cdd:PRK03918 640 KRLEELRKELEE----LEKKYSEEE--YEELREEYLELSRELAGLRAEleelEKRREEIKKTLEKLKEELEEREKAKKEL 713
|
....*....
gi 2024359610 2059 EQKLKAKSE 2067
Cdd:PRK03918 714 EKLEKALER 722
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
342-920 |
7.18e-08 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 58.15 E-value: 7.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 342 SRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVrDGHDRHVLEMEAKMDQLRAMVEAA 421
Cdd:PRK03918 179 ERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKEL-EELKEEIEELEKELESLEGSKRKL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 422 DREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEDPENTQTKLehariKELEQSLLFEKTKADKLQRELED 501
Cdd:PRK03918 258 EEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDEL-----REIEKRLSRLEEEINGIEERIKE 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 502 TRvatvSEKSRIMELERDLALRVKEVAELRGRLESskhiddVDTSLSLLQEISSLQEKMAAAGKEhqrEMSSLKEKFESS 581
Cdd:PRK03918 333 LE----EKEERLEELKKKLKELEKRLEELEERHEL------YEEAKAKKEELERLKKRLTGLTPE---KLEKELEELEKA 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 582 EEALRKEIKTLSASNERMGKENESLKTKldhankensdVIELWKSKLESAIASHQQAMEELKVSFN------KGVGAQTA 655
Cdd:PRK03918 400 KEEIEEEISKITARIGELKKEIKELKKA----------IEELKKAKGKCPVCGRELTEEHRKELLEeytaelKRIEKELK 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 656 EFAELKTQMEKVKLDYENEMSNL-KLKQENEKSQHLKEIEA-LKAKLLEVTEEKEQTLENLKAKLESVEDQhLVEMEDTL 733
Cdd:PRK03918 470 EIEEKERKLRKELRELEKVLKKEsELIKLKELAEQLKELEEkLKKYNLEELEKKAEEYEKLKEKLIKLKGE-IKSLKKEL 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 734 NKLQEAEIKVKELDvlqakcneqtkligsltQQIRASEEKLLDLaaLQKANSEGKLEIQKLSEQLQAAEKqIQNLETEKV 813
Cdd:PRK03918 549 EKLEELKKKLAELE-----------------KKLDELEEELAEL--LKELEELGFESVEELEERLKELEP-FYNEYLELK 608
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 814 GGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTsaVDGAENAQRAMQETINKLNQKEEQFALMS 893
Cdd:PRK03918 609 DAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYS--EEEYEELREEYLELSRELAGLRAELEELE 686
|
570 580
....*....|....*....|....*..
gi 2024359610 894 SELEQLKSNLTVMETKLKEREEREQQL 920
Cdd:PRK03918 687 KRREEIKKTLEKLKEELEEREKAKKEL 713
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
873-1294 |
7.44e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 57.86 E-value: 7.44e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 873 RAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLEndIAEIMKSSGDSSAQLMKMNDEL 952
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLP--LYQELEALEAELAELPERLEEL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 953 RLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEK 1032
Cdd:COG4717 152 EERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQ 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1033 ETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVL--------ASARKEIELMSDKM 1104
Cdd:COG4717 232 LENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLflllarekASLGKEAEELQALP 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1105 RDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQK--EAAEAKSRQESTEKV 1182
Cdd:COG4717 312 ALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAAllAEAGVEDEEELRAAL 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1183 ALISEKSKLLSEIETAQADLLKITQENDALRS--SESTLLQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRv 1260
Cdd:COG4717 392 EQAEEYQELKEELEELEEQLEELLGELEELLEalDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGE- 470
|
410 420 430
....*....|....*....|....*....|....
gi 2024359610 1261 ikdkddvIQRLQSSYDDLARNQRELLQEVSILTA 1294
Cdd:COG4717 471 -------LAELLQELEELKAELRELAEEWAALKL 497
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
2188-2204 |
7.85e-08 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 49.77 E-value: 7.85e-08
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
336-965 |
9.31e-08 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 57.42 E-value: 9.31e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 336 LLTETSSRYARKISGTTALQEALKEKQQHIEQLLaERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDqlr 415
Cdd:pfam05483 159 LLKETCARSAEKTKKYEYEREETRQVYMDLNNNI-EKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKE--- 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 416 amVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKrqisedpentqTKLEHARIKELEQsllfektKADKL 495
Cdd:pfam05483 235 --INDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEK-----------TKLQDENLKELIE-------KKDHL 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 496 QRELEDTRVATVSEKSRIMELERDLALRVKEVAEL------------RGRLESSKHIDDVDTSLSLLQE--------ISS 555
Cdd:pfam05483 295 TKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLteekeaqmeelnKAKAAHSFVVTEFEATTCSLEEllrteqqrLEK 374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 556 LQEKMAAAGKEHQREMSSLKE--KFESSEEALRKEIKTLSASNERMGKENESLK-------------TKLDHANKENSDV 620
Cdd:pfam05483 375 NEDQLKIITMELQKKSSELEEmtKFKNNKEVELEELKKILAEDEKLLDEKKQFEkiaeelkgkeqelIFLLQAREKEIHD 454
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 621 IELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFAEL-KTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAK 699
Cdd:pfam05483 455 LEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCdKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLK 534
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 700 LLEVTEEKEQtleNLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRAS-EEKLLDLA 778
Cdd:pfam05483 535 QIENLEEKEM---NLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQiENKNKNIE 611
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 779 ALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGK-EQKLLDLEKNLSAVNQVKDSLEKELQLL 857
Cdd:pfam05483 612 ELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEiEDKKISEEKLLEEVEKAKAIADEAVKLQ 691
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 858 KEkftsavdgaenaqramqetINKLNQKE--EQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIm 935
Cdd:pfam05483 692 KE-------------------IDKRCQHKiaEMVALMEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKAALEIELSNI- 751
|
650 660 670
....*....|....*....|....*....|
gi 2024359610 936 kssgdsSAQLMKMNDELRLKERQLEQIQLE 965
Cdd:pfam05483 752 ------KAELLSLKKQLEIEKEEKEKLKME 775
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
702-1639 |
1.09e-07 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 57.49 E-value: 1.09e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 702 EVTEEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQEAEIKVKE-LDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAA- 779
Cdd:pfam01576 5 EEMQAKEEELQKVKERQQKAESE-LKELEKKHQQLCEEKNALQEqLQAETELCAEAEEMRARLAARKQELEEILHELESr 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 780 ----------LQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLtkelqgkEQKLLDLEKNLSAVNQVKDS 849
Cdd:pfam01576 84 leeeeersqqLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKL-------EEDILLLEDQNSKLSKERKL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 850 LEKELQLLKEKFTSAVDGAENaqramqetINKLNQKEEqfalmsseleqlkSNLTVMETKLKEREEREQQLTEAKVKLEN 929
Cdd:pfam01576 157 LEERISEFTSNLAEEEEKAKS--------LSKLKNKHE-------------AMISDLEERLKKEEKGRQELEKAKRKLEG 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 930 DIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNV-EQTAQKAEqsQQETLKTHQEELKKMQDQ 1008
Cdd:pfam01576 216 ESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIrELEAQISE--LQEDLESERAARNKAEKQ 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1009 LTDMKKQMETSQNQYKDLQAKYEKEtSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQA-EELKKQAEQAKSLS 1087
Cdd:pfam01576 294 RRDLGEELEALKTELEDTLDTTAAQ-QELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQAlEELTEQLEQAKRNK 372
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1088 SVLASARKEIElmsDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSE-------- 1159
Cdd:pfam01576 373 ANLEKAKQALE---SENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSElesvssll 449
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1160 ----NKKILKQKEAAEAKSR---------QESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQL--- 1223
Cdd:pfam01576 450 neaeGKNIKLSKDVSSLESQlqdtqellqEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLsdm 529
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1224 -KELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSIL---------- 1292
Cdd:pfam01576 530 kKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLekkqkkfdqm 609
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1293 -----------TAERDSAQEKDLDLKSTHIALKNEIDCLL-------QTNRSLQSEKEMLLKSREELCVSLANTANENQA 1354
Cdd:pfam01576 610 laeekaisaryAEERDRAEAEAREKETRALSLARALEEALeakeeleRTNKQLRAEMEDLVSSKDDVGKNVHELERSKRA 689
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1355 LKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAER------- 1427
Cdd:pfam01576 690 LEQQVEEMKTQLEELEDELQATEDAKLRLEVNMQALKAQFERDLQARDEQGEEKRRQLVKQVRELEAELEDERkqraqav 769
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1428 ------EELVNENKAVTEKLTKATADAV-------LAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKY 1494
Cdd:pfam01576 770 aakkklELDLKELEAQIDAANKGREEAVkqlkklqAQMKDLQRELEEARASRDEILAQSKESEKKLKNLEAELLQLQEDL 849
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1495 SELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELKKKNLeNQELiacrsdLSDLLKEAQDARRTL 1574
Cdd:pfam01576 850 AASERARRQAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQS-NTEL------LNDRLRKSTLQVEQL 922
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024359610 1575 ENELAAVSHAKQVLSSSFNTcssdieiLNRERTELQDKCQKLTGEVENMKENLTVEKKARILDKE 1639
Cdd:pfam01576 923 TTELAAERSTSQKSESARQQ-------LERQNKELKAKLQEMEGTVKSKFKSSIAALEAKIAQLE 980
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
950-1148 |
1.67e-07 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 55.99 E-value: 1.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 950 DELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDlQAK 1029
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAE-LEALQAEIDKLQAEIAEAEAEIEERREELGE-RAR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1030 YEKETSEMITKHDA-----DIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKM 1104
Cdd:COG3883 94 ALYRSGGSVSYLDVllgseSFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAEL 173
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2024359610 1105 RDLISEKE----TLAQERNTLKLEKESLLSQHLEMESKILLVQQDREE 1148
Cdd:COG3883 174 EAQQAEQEallaQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAA 221
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1536-2079 |
2.62e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 56.18 E-value: 2.62e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1536 IEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSH---AKQVLSSSFNTCSSDIEILNRERTELQDK 1612
Cdd:TIGR04523 147 IKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNkllKLELLLSNLKKKIQKNKSLESQISELKKQ 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1613 CQKLTGEVENMKENLtVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEkekSETKLEEVIK 1692
Cdd:TIGR04523 227 NNQLKDNIEKKQQEI-NEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQ---LKSEISDLNN 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1693 EKMilyketeqlASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINE 1772
Cdd:TIGR04523 303 QKE---------QDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIE 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1773 EILKEKEKLSKEYYKLHEKVVALLEQtdadFSCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEE- 1851
Cdd:TIGR04523 374 KLKKENQSYKQEIKNLESQINDLESK----IQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQd 449
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1852 -VLQTMEKVTKEKDAIHQEKIETL-ASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEAL 1929
Cdd:TIGR04523 450 sVKELIIKNLDNTRESLETQLKVLsRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKL 529
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1930 KLAAAQKSQQLAALQEENVKLAEELGRSrdevtshqKLEEERSVLNNQLLEMKKRESTLKK---EIDEERASLQKSISDT 2006
Cdd:TIGR04523 530 ESEKKEKESKISDLEDELNKDDFELKKE--------NLEKEIDEKNKEIEELKQTQKSLKKkqeEKQELIDQKEKEKKDL 601
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024359610 2007 SALITQKDEELEKLRNEITVLRGENasaktlqsvvKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSGDI 2079
Cdd:TIGR04523 602 IKEIEEKEKKISSLEKELEKAKKEN----------EKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEI 664
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
427-1443 |
3.94e-07 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 55.57 E-value: 3.94e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 427 ELLNQLEEEKRKVEDLQFRVEEESitkGDLERK-RQISEDPENTQTKLE-----HARIKELEQSLLFEKTKADKLQREL- 499
Cdd:pfam01576 5 EEMQAKEEELQKVKERQQKAESEL---KELEKKhQQLCEEKNALQEQLQaetelCAEAEEMRARLAARKQELEEILHELe 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 500 ------EDTRVATVSEKSRIMELERDLALRVKEVAELRGRLESSK---------HIDDV----DTSLSLLQEISSLQEKM 560
Cdd:pfam01576 82 srleeeEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKvtteakikkLEEDIllleDQNSKLSKERKLLEERI 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 561 A------AAGKEHQREMSSLKEKFESS----EEALRKEiktlsasnERMGKENESLKTKLDHANKENSDVIELWKSKLES 630
Cdd:pfam01576 162 SeftsnlAEEEEKAKSLSKLKNKHEAMisdlEERLKKE--------EKGRQELEKAKRKLEGESTDLQEQIAELQAQIAE 233
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 631 AIASHQQAMEELKVSFNKGVGAQTAEFA------ELKTQMEKVKLDYENEMSnLKLKQENEKSQHLKEIEALKAKLL--- 701
Cdd:pfam01576 234 LRAQLAKKEEELQAALARLEEETAQKNNalkkirELEAQISELQEDLESERA-ARNKAEKQRRDLGEELEALKTELEdtl 312
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 702 -------EVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAeikvkeLDVLQAKCNEQTKLIGSLTQQIRASEEKL 774
Cdd:pfam01576 313 dttaaqqELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQA------LEELTEQLEQAKRNKANLEKAKQALESEN 386
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 775 LDLAA----LQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSL 850
Cdd:pfam01576 387 AELQAelrtLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSL 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 851 EKELQLLKEKFTsavdgaenaqramQETINKLNqkeeqfalMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLEND 930
Cdd:pfam01576 467 ESQLQDTQELLQ-------------EETRQKLN--------LSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQ 525
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 931 IAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQS--QQETLKTHQEELKKMQDQ 1008
Cdd:pfam01576 526 LSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLlvDLDHQRQLVSNLEKKQKK 605
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1009 LTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDAdikgFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSS 1088
Cdd:pfam01576 606 FDQMLAEEKAISARYAEERDRAEAEAREKETRALS----LARALEEALEAKEELERTNKQLRAEMEDLVSSKDDVGKNVH 681
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1089 VLASARKEIELMSDKMRDLISEKETLAQERNTLKLEkesllsqhLEMESKILLVQQDReELWTKNEELNSENKKILKQKE 1168
Cdd:pfam01576 682 ELERSKRALEQQVEEMKTQLEELEDELQATEDAKLR--------LEVNMQALKAQFER-DLQARDEQGEEKRRQLVKQVR 752
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1169 AAEAKSRQESTEKVALISEKSKLLSEIETAQADLlkitqenDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELE 1248
Cdd:pfam01576 753 ELEAELEDERKQRAQAVAAKKKLELDLKELEAQI-------DAANKGREEAVKQLKKLQAQMKDLQRELEEARASRDEIL 825
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1249 HYQKlleENDRVIKDKDDVIQRLQssyDDLARNQRELLQevsiLTAERDSAQEKDLDLKSTHIALKNEidcllqtNRSLQ 1328
Cdd:pfam01576 826 AQSK---ESEKKLKNLEAELLQLQ---EDLAASERARRQ----AQQERDELADEIASGASGKSALQDE-------KRRLE 888
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1329 SEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEK 1408
Cdd:pfam01576 889 ARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKLQEMEGTVKSKFKSS 968
|
1050 1060 1070
....*....|....*....|....*....|....*
gi 2024359610 1409 IHLLQEALFASEQRLLAEREELVNENKAVTEKLTK 1443
Cdd:pfam01576 969 IAALEAKIAQLEEQLEQESRERQAANKLVRRTEKK 1003
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
984-1228 |
4.93e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.38 E-value: 4.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 984 AQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKyeketsemITKHDADIKGFKQNLLDAEEALKAAQ 1063
Cdd:COG4942 19 ADAAAEAEAE-LEQLQQEIAELEKELAALKKEEKALLKQLAALERR--------IAALARRIRALEQELAALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1064 KKNDELETQAEELKKQ-AEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLlsqhlemeskillv 1142
Cdd:COG4942 90 KEIAELRAELEAQKEElAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEEL-------------- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1143 QQDREELWTKNEELNSEnkkiLKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQAdllKITQENDALRSSESTLLQQ 1222
Cdd:COG4942 156 RADLAELAALRAELEAE----RAELEALLAELEEERAALEALKAERQKLLARLEKELA---ELAAELAELQQEAEELEAL 228
|
....*.
gi 2024359610 1223 LKELQA 1228
Cdd:COG4942 229 IARLEA 234
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1844-2056 |
5.15e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.38 E-value: 5.15e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1844 EADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELK 1923
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQK 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1924 KEFEALkLAAAQKSQQLAALQ-----------EENVKLAEELGRSR-DEVTSHQKLEEERSVLNNQLLEMKKRESTLKKE 1991
Cdd:COG4942 104 EELAEL-LRALYRLGRQPPLAlllspedfldaVRRLQYLKYLAPARrEQAEELRADLAELAALRAELEAERAELEALLAE 182
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024359610 1992 IDEERASLQKSISDTSALITQKDEELEKLRNEITVLRgenASAKTLQSVVKTLESDKLKLEEKVK 2056
Cdd:COG4942 183 LEEERAALEALKAERQKLLARLEKELAELAAELAELQ---QEAEELEALIARLEAEAAAAAERTP 244
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
406-1552 |
6.31e-07 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 55.06 E-value: 6.31e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 406 EMEAKMDQLRAMVEAADREKVELLNQLEEEKRKVEDLQ----------FRVEEESITKGDL-----ERKRQISEDPENTQ 470
Cdd:TIGR01612 541 EIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEkeikdlfdkyLEIDDEIIYINKLklelkEKIKNISDKNEYIK 620
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 471 TKLEHARIKELEQSLLFEKTKADKLQ----RELEDTRVATV-SEKSRIME-----LERDLALRVKEVAelRGRLESSKHI 540
Cdd:TIGR01612 621 KAIDLKKIIENNNAYIDELAKISPYQvpehLKNKDKIYSTIkSELSKIYEddidaLYNELSSIVKENA--IDNTEDKAKL 698
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 541 DDVDTSLSllQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEI-----KTLSASNERMGKENESLKTKLDHANK 615
Cdd:TIGR01612 699 DDLKSKID--KEYDKIQNMETATVELHLSNIENKKNELLDIIVEIKKHIhgeinKDLNKILEDFKNKEKELSNKINDYAK 776
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 616 ENsDVIELWKSKLesaiashqqamEELKVSFNKGVGAQTAEFAELKTQMEKVKlDYENEMSnlklKQENEKSQHLKEIEA 695
Cdd:TIGR01612 777 EK-DELNKYKSKI-----------SEIKNHYNDQINIDNIKDEDAKQNYDKSK-EYIKTIS----IKEDEIFKIINEMKF 839
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 696 LKAKLLEVTEEKEQTLENLKAKLESVEDQhlveMEDTLNKLQeAEIKVKELDVLQAKCNEQTKLIGSLTQQIrasEEKLL 775
Cdd:TIGR01612 840 MKDDFLNKVDKFINFENNCKEKIDSEHEQ----FAELTNKIK-AEISDDKLNDYEKKFNDSKSLINEINKSI---EEEYQ 911
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 776 DLAALQKANSEGKL------EIQKL-SEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEK-----NLSAV 843
Cdd:TIGR01612 912 NINTLKKVDEYIKIcentkeSIEKFhNKQNILKEILNKNIDTIKESNLIEKSYKDKFDNTLIDKINELDKafkdaSLNDY 991
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 844 NQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQE-TINKLNQKEEQFALMSSELEqlksnlTVMETKLKEREEREQQLTE 922
Cdd:TIGR01612 992 EAKNNELIKYFNDLKANLGKNKENMLYHQFDEKEkATNDIEQKIEDANKNIPNIE------IAIHTSIYNIIDEIEKEIG 1065
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 923 AKVKLENdiAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANE--KAVQLQKNVEQTAQKAEQSQQETLKTHQE 1000
Cdd:TIGR01612 1066 KNIELLN--KEILEEAEINITNFNEIKEKLKHYNFDDFGKEENIKYADEinKIKDDIKNLDQKIDHHIKALEEIKKKSEN 1143
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1001 ELKKMQDQLTDMKKQMETSqnQYKDLQAKYEKETSEMITKHDAdikgfKQNLLDAEEALKAAQKKNDELETQAEELKK-Q 1079
Cdd:TIGR01612 1144 YIDEIKAQINDLEDVADKA--ISNDDPEEIEKKIENIVTKIDK-----KKNIYDEIKKLLNEIAEIEKDKTSLEEVKGiN 1216
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1080 AEQAKSLSSVLAsarKEIELMSDKMRDLISEKETLAQERNTLKLEkesllSQHLEMESKILLVQQDREELWTKNEELNSE 1159
Cdd:TIGR01612 1217 LSYGKNLGKLFL---EKIDEEKKKSEHMIKAMEAYIEDLDEIKEK-----SPEIENEMGIEMDIKAEMETFNISHDDDKD 1288
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1160 NKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRS--SESTLLQQLKELQANKDAVDvac 1237
Cdd:TIGR01612 1289 HHIISKKHDENISDIREKSLKIIEDFSEESDINDIKKELQKNLLDAQKHNSDINLylNEIANIYNILKLNKIKKIID--- 1365
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1238 qkhikereELEHYQKLLEENDRVIKDKDDVIQRL-QSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNE 1316
Cdd:TIGR01612 1366 --------EVKEYTKEIEENNKNIKDELDKSEKLiKKIKDDINLEECKSKIESTLDDKDIDECIKKIKELKNHILSEESN 1437
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1317 IDCLLQTNRSLQSEKEMLLKSREelcvsLANTANEnQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEE 1396
Cdd:TIGR01612 1438 IDTYFKNADENNENVLLLFKNIE-----MADNKSQ-HILKIKKDNATNDHDFNINELKEHIDKSKGCKDEADKNAKAIEK 1511
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1397 MKSSREASNSEKIHLLQEalfASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQF 1476
Cdd:TIGR01612 1512 NKELFEQYKKDVTELLNK---YSALAIKNKFAKTKKDSEIIIKEIKDAHKKFILEAEKSEQKIKEIKKEKFRIEDDAAKN 1588
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1477 EKHNEALLREK---DELERKYSELLDEKKSLENAFSDM----KREQELDFSAKRLLVQENTTLKYSIEALEEELK--KKN 1547
Cdd:TIGR01612 1589 DKSNKAAIDIQlslENFENKFLKISDIKKKINDCLKETesieKKISSFSIDSQDTELKENGDNLNSLQEFLESLKdqKKN 1668
|
....*
gi 2024359610 1548 LENQE 1552
Cdd:TIGR01612 1669 IEDKK 1673
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
880-1517 |
6.71e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 54.64 E-value: 6.71e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 880 NKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQL 959
Cdd:TIGR04523 33 TEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEI 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 960 EQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQeELKKMQDQLTDMKKQMEtsqnQYKDLQAKYEKETSEmIT 1039
Cdd:TIGR04523 113 KNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEK-ELEKLNNKYNDLKKQKE----ELENELNLLEKEKLN-IQ 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1040 KHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKslssvlasarKEIELMSDKMRDLISEKETLAQERN 1119
Cdd:TIGR04523 187 KNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLK----------DNIEKKQQEINEKTTEISNTQTQLN 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1120 TLKLEKESLLSQhleMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKvalISEKSKLLSEIETaq 1199
Cdd:TIGR04523 257 QLKDEQNKIKKQ---LSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKELKSE---LKNQEKKLEEIQN-- 328
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1200 adllKITQENDALRSSESTlLQQLKELQANKDAVDVACQKHIKERE-ELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDL 1278
Cdd:TIGR04523 329 ----QISQNNKIISQLNEQ-ISQLKKELTNSESENSEKQRELEEKQnEIEKLKKENQSYKQEIKNLESQINDLESKIQNQ 403
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1279 ARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLR 1358
Cdd:TIGR04523 404 EKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQN 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1359 KDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEK------IHLLQEALFASEQRLLAER-EELV 1431
Cdd:TIGR04523 484 LEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKkekeskISDLEDELNKDDFELKKENlEKEI 563
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1432 NENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDM 1511
Cdd:TIGR04523 564 DEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKL 643
|
....*.
gi 2024359610 1512 KREQEL 1517
Cdd:TIGR04523 644 KQEVKQ 649
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
602-1388 |
7.75e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 54.73 E-value: 7.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 602 ENESLKTKLDHANKENSDVIELWKSKLESAIASHQQAMEELKvsfnKGVGAQTAEFAELKTQMEKVKLDYENEMS-NLKL 680
Cdd:pfam05483 71 ENSEGLSRLYSKLYKEAEKIKKWKVSIEAELKQKENKLQENR----KIIEAQRKAIQELQFENEKVSLKLEEEIQeNKDL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 681 KQENEKSQH----LKEIEALKAKLLEVTE-EKEQT----------LENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKE 745
Cdd:pfam05483 147 IKENNATRHlcnlLKETCARSAEKTKKYEyEREETrqvymdlnnnIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQH 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 746 LDV-LQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKansEGKLEIQKLSEQLQAAEKQIQNLETEKvggsskvSNLTK 824
Cdd:pfam05483 227 LEEeYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLE---ESRDKANQLEEKTKLQDENLKELIEKK-------DHLTK 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 825 ELQgkeqkllDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENaqramqeTINKLNQKEEQFALMSSELEQLKSNLT 904
Cdd:pfam05483 297 ELE-------DIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEA-------QMEELNKAKAAHSFVVTEFEATTCSLE 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 905 -VMETKLKEREEREQQLTEAKVKLENdiaeimkssgdSSAQLMKMNDELRLKERQLEQIQLELTKaNEKAVQLQKNVEQT 983
Cdd:pfam05483 363 eLLRTEQQRLEKNEDQLKIITMELQK-----------KSSELEEMTKFKNNKEVELEELKKILAE-DEKLLDEKKQFEKI 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 984 AQKAEQSQQET---LKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKEtsemitkhdadikgfkqnlldaeealk 1060
Cdd:pfam05483 431 AEELKGKEQELiflLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKE--------------------------- 483
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1061 aaQKKNDELETQAEEL----KKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLlsqhleme 1136
Cdd:pfam05483 484 --KLKNIELTAHCDKLllenKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESV-------- 553
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1137 skillvqqdREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSE 1216
Cdd:pfam05483 554 ---------REEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKG 624
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1217 STLLQQLK--ELQANKDAVDVACQKHiKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTA 1294
Cdd:pfam05483 625 SAENKQLNayEIKVNKLELELASAKQ-KFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIA 703
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1295 ERDSAQEKDldlKSTHIALKNEIDCLLQTNRSLQSEKEMLlksREELCVSLANTANENQALKlrkdemqTELETEREKLE 1374
Cdd:pfam05483 704 EMVALMEKH---KHQYDKIIEERDSELGLYKNKEQEQSSA---KAALEIELSNIKAELLSLK-------KQLEIEKEEKE 770
|
810
....*....|....
gi 2024359610 1375 KMTKDNMDLKASLS 1388
Cdd:pfam05483 771 KLKMEAKENTAILK 784
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
679-1098 |
8.50e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 54.39 E-value: 8.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 679 KLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHlvemeDTLNKLQEAEIKVKELDVLQAKCNEQTK 758
Cdd:COG4717 72 ELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREEL-----EKLEKLLQLLPLYQELEALEAELAELPE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 759 LIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQL-QAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLE 837
Cdd:COG4717 147 RLEELEERLEELRELEEELEELEAELAELQEELEELLEQLsLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELE 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 838 KNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREERE 917
Cdd:COG4717 227 EELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEE 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 918 QQLTEAKVKLEN-DIAEIMKSSG--------------DSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQ 982
Cdd:COG4717 307 LQALPALEELEEeELEELLAALGlppdlspeellellDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEE 386
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 983 TAQKAEQSQQetLKTHQEELKKMQDQLTDMKKQMET--SQNQYKDLQAKYE------KETSEMITKHDADIKGFKQNLLD 1054
Cdd:COG4717 387 LRAALEQAEE--YQELKEELEELEEQLEELLGELEEllEALDEEELEEELEeleeelEELEEELEELREELAELEAELEQ 464
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 2024359610 1055 AEEALKAAQKKnDELETQAEELKKQAEQAKSL---SSVLASARKEIE 1098
Cdd:COG4717 465 LEEDGELAELL-QELEELKAELRELAEEWAALklaLELLEEAREEYR 510
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
622-1082 |
9.73e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 54.57 E-value: 9.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 622 ELWKSKleSAIASHQQAMEELkvsfnkgvgaqTAEFAELKTQMEKVKLDYENEMSNLKLKQE----NEKSQHLKE-IEAL 696
Cdd:COG3096 293 ELFGAR--RQLAEEQYRLVEM-----------ARELEELSARESDLEQDYQAASDHLNLVQTalrqQEKIERYQEdLEEL 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 697 KAKLlevtEEKEQTLENLKAKLESVEDQhlvemedtlnkLQEAEIKVKEL-----DVLQAKCNEQTKLIgSLTQQIRASE 771
Cdd:COG3096 360 TERL----EEQEEVVEEAAEQLAEAEAR-----------LEAAEEEVDSLksqlaDYQQALDVQQTRAI-QYQQAVQALE 423
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 772 E--KLLDLAALQKANSEGKLEiqklseQLQAAEKQIqnletekvggsskvsnltkelqgkEQKLLDLEKNLSAVNQVKDS 849
Cdd:COG3096 424 KarALCGLPDLTPENAEDYLA------AFRAKEQQA------------------------TEEVLELEQKLSVADAARRQ 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 850 LEKELQLLkEKFTSAVDGAENAQRAmQETINKLnqkeeqfalmsSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLEn 929
Cdd:COG3096 474 FEKAYELV-CKIAGEVERSQAWQTA-RELLRRY-----------RSQQALAQRLQQLRAQLAELEQRLRQQQNAERLLE- 539
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 930 diaEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQsqqetLKTHQEELKKMQDQL 1009
Cdd:COG3096 540 ---EFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKE-----LAARAPAWLAAQDAL 611
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024359610 1010 TDMKKQmetSQNQYKDLQakyeketsemitkhdaDIKGFKQNLLDAEEALKAAQkknDELETQAEELKKQAEQ 1082
Cdd:COG3096 612 ERLREQ---SGEALADSQ----------------EVTAAMQQLLEREREATVER---DELAARKQALESQIER 662
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
797-997 |
1.18e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 53.30 E-value: 1.18e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 797 QLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQ 876
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 877 ETINKLNQKEeqFALMSSELEQLKSNLTVMET-------KLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMN 949
Cdd:COG3883 97 RSGGSVSYLD--VLLGSESFSDFLDRLSALSKiadadadLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELE 174
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2024359610 950 DELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKT 997
Cdd:COG3883 175 AQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAA 222
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
703-1278 |
1.30e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.89 E-value: 1.30e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 703 VTEEKEQTLENLKAKLESVEDQHLVEmedtlnKLQEAEIKVKELDVLQAKCNEQTkligsltqqiRASEEKLLDLAALQK 782
Cdd:PRK02224 181 VLSDQRGSLDQLKAQIEEKEEKDLHE------RLNGLESELAELDEEIERYEEQR----------EQARETRDEADEVLE 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 783 ANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFT 862
Cdd:PRK02224 245 EHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDE 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 863 SAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSS 942
Cdd:PRK02224 325 ELRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAP 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 943 AQLMKMND----------ELRLKERQLEQIQLELTKANEKAVQLQK--NVEQTAQKAEQSQQ-ETLKTHQEELKKMQDQL 1009
Cdd:PRK02224 405 VDLGNAEDfleelreerdELREREAELEATLRTARERVEEAEALLEagKCPECGQPVEGSPHvETIEEDRERVEELEAEL 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1010 TDMKKQMETSQNQYKdlQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKslsSV 1089
Cdd:PRK02224 485 EDLEEEVEEVEERLE--RAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKR---EA 559
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1090 LASARKEIELMSDKMRDLISEKETLAQERNTLKlEKESLLSQHLEMESKILLVQQDREELwtknEELNSENKKILKQKEa 1169
Cdd:PRK02224 560 AAEAEEEAEEAREEVAELNSKLAELKERIESLE-RIRTLLAAIADAEDEIERLREKREAL----AELNDERRERLAEKR- 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1170 aEAKSRQESTEKVALISEkskLLSEIETAQADLLKITQENDALRSSESTLLQQLKelqankdavdvACQKHIKEREELEH 1249
Cdd:PRK02224 634 -ERKRELEAEFDEARIEE---AREDKERAEEYLEQVEEKLDELREERDDLQAEIG-----------AVENELEELEELRE 698
|
570 580
....*....|....*....|....*....
gi 2024359610 1250 YQKLLEENDRVIKDKDDVIQRLQSSYDDL 1278
Cdd:PRK02224 699 RREALENRVEALEALYDEAEELESMYGDL 727
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
354-633 |
1.44e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 53.91 E-value: 1.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 354 LQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRdghdRHVLEMEAKMDQLRAMVEAADREKVELLNQLE 433
Cdd:TIGR02168 773 AEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLN----EEAANLRERLESLERRIAATERRLEDLEEQIE 848
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 434 EEKRKVEDLQFRVEEESITKGDLERKRQISEDpentqtklEHARIKELEQSLLFEKTKADKLQRELEdtrvatvsekSRI 513
Cdd:TIGR02168 849 ELSEDIESLAAEIEELEELIEELESELEALLN--------ERASLEEALALLRSELEELSEELRELE----------SKR 910
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 514 MELERDLALRVKEVAELRGRLEsskhiddvdtslSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLS 593
Cdd:TIGR02168 911 SELRRELEELREKLAQLELRLE------------GLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLE 978
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2024359610 594 ASNERMGKEN-------ESLKTKLDHANKENSDVIELwKSKLESAIA 633
Cdd:TIGR02168 979 NKIKELGPVNlaaieeyEELKERYDFLTAQKEDLTEA-KETLEEAIE 1024
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1531-2046 |
1.64e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.51 E-value: 1.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1531 TLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLEnelaavshakqVLSSSFNTCSSDIEILNRERTELQ 1610
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELE-----------TLEAEIEDLRETIAETEREREELA 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1611 DKCQKLTGEVENMKENLT---VEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKL 1687
Cdd:PRK02224 279 EEVRDLRERLEELEEERDdllAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERA 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1688 EEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKSL 1767
Cdd:PRK02224 359 EELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTA 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1768 viinEEILKEKEKLskeyykLHEKVVALLEQT--DADFSCRLLVSEGKHELLLEEMSNLALKLREIE-RLQAQTFMQKFE 1844
Cdd:PRK02224 439 ----RERVEEAEAL------LEAGKCPECGQPveGSPHVETIEEDRERVEELEAELEDLEEEVEEVEeRLERAEDLVEAE 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1845 AD-KRAEEVLQTMEKVTKEKDAIHQEKIETLASLensRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELK 1923
Cdd:PRK02224 509 DRiERLEERREDLEELIAERRETIEEKRERAEEL---RERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELK 585
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1924 KEFEALklaaaqksQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERsvlNNQLLEMKKRESTLKKEIDEERAS----- 1998
Cdd:PRK02224 586 ERIESL--------ERIRTLLAAIADAEDEIERLREKREALAELNDER---RERLAEKRERKRELEAEFDEARIEeared 654
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359610 1999 -------LQKSISDTSALITQKD-------------EELEKLRNEITVLRGENASAKTLQSVVKTLES 2046
Cdd:PRK02224 655 keraeeyLEQVEEKLDELREERDdlqaeigavenelEELEELRERREALENRVEALEALYDEAEELES 722
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
778-1517 |
1.64e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 53.43 E-value: 1.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 778 AALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQkllDLEKNLSAVNQVKDSLEKELQLL 857
Cdd:TIGR00618 155 AQFLKAKSKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTL---CTPCMPDTYHERKQVLEKELKHL 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 858 KEkftsavdgaenAQRAMQETINKLNQKEEQFALMSS---ELEQLKSNLTVMETKLKEREEREQQLTEAKVKLEndIAEI 934
Cdd:TIGR00618 232 RE-----------ALQQTQQSHAYLTQKREAQEEQLKkqqLLKQLRARIEELRAQEAVLEETQERINRARKAAP--LAAH 298
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 935 MKSSGDSSAQLMKMNDELRLKERQLEQI--QLELTKANEKAVQLQKNVEQTAQKAEQ------SQQETLKTHQEELKKMQ 1006
Cdd:TIGR00618 299 IKAVTQIEQQAQRIHTELQSKMRSRAKLlmKRAAHVKQQSSIEEQRRLLQTLHSQEIhirdahEVATSIREISCQQHTLT 378
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1007 DQLTDMKKQMETSQNQYKDLQAKYEKETSEMITK--HDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAK 1084
Cdd:TIGR00618 379 QHIHTLQQQKTTLTQKLQSLCKELDILQREQATIdtRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEK 458
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1085 SLSSVLASARKEIElmsdkmrDLISEKETLAQERNTLKLEKESLLSQHLEMESkiLLVQQDREELWTKNEELNSENKKIL 1164
Cdd:TIGR00618 459 IHLQESAQSLKERE-------QQLQTKEQIHLQETRKKAVVLARLLELQEEPC--PLCGSCIHPNPARQDIDNPGPLTRR 529
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1165 KQKEAAEAKSRQESTEKV-----ALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQK 1239
Cdd:TIGR00618 530 MQRGEQTYAQLETSEEDVyhqltSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDM 609
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1240 HIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEvSILTAERDSAQEKDLDLKSTHIALKneidc 1319
Cdd:TIGR00618 610 LACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQE-RVREHALSIRVLPKELLASRQLALQ----- 683
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1320 llqtnrSLQSEKEMLLKSREELcvslantaneNQALKLRKDEMQTELETEREkLEKMTKDNMDLKASLSSLSNFLEEMKS 1399
Cdd:TIGR00618 684 ------KMQSEKEQLTYWKEML----------AQCQTLLRELETHIEEYDRE-FNEIENASSSLGSDLAAREDALNQSLK 746
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1400 SREASNSEKIHLLQEALFASEQRLL------AEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKS 1473
Cdd:TIGR00618 747 ELMHQARTVLKARTEAHFNNNEEVTaalqtgAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETL 826
|
730 740 750 760
....*....|....*....|....*....|....*....|....*...
gi 2024359610 1474 LQFEKHNEALLREKD----ELERKYSELLDEKKSLENAFSDMKREQEL 1517
Cdd:TIGR00618 827 VQEEEQFLSRLEEKSatlgEITHQLLKYEECSKQLAQLTQEQAKIIQL 874
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
479-812 |
1.71e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.53 E-value: 1.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 479 KELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLE--------SSKHIDDVDTSLSLL 550
Cdd:TIGR02169 670 RSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEqleqeeekLKERLEELEEDLSSL 749
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 551 -QEISSLQEKMAAAGK---EHQREMSSLKEKFESSEEALRKE-IKTLSASNERMGKENESLKTKLDHANKENSDViELWK 625
Cdd:TIGR02169 750 eQEIENVKSELKELEArieELEEDLHKLEEALNDLEARLSHSrIPEIQAELSKLEEEVSRIEARLREIEQKLNRL-TLEK 828
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 626 SKLESAIASHQQAMEELK---VSFNKGVGAQTAEFAELKTQMEKVKL---DYENEMSNLKLKQENEKSQhLKEIEALKAK 699
Cdd:TIGR02169 829 EYLEKEIQELQEQRIDLKeqiKSIEKEIENLNGKKEELEEELEELEAalrDLESRLGDLKKERDELEAQ-LRELERKIEE 907
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 700 LLEVTEEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEkllDLAA 779
Cdd:TIGR02169 908 LEAQIEKKRKRLSELKAKLEALEEE-LSEIEDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQ---EYEE 983
|
330 340 350
....*....|....*....|....*....|...
gi 2024359610 780 LQKANSEGKLEIQKLSEQLQAAEKQIQNLETEK 812
Cdd:TIGR02169 984 VLKRLDELKEKRAKLEEERKAILERIEEYEKKK 1016
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
661-1159 |
2.45e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.12 E-value: 2.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 661 KTQMEKVKLDYENEMSNLKLKQENEKSQHLKE-IEALKAKLLEVTEEKE----------QTLENLKAKLESVED--QHLV 727
Cdd:PRK02224 175 RLGVERVLSDQRGSLDQLKAQIEEKEEKDLHErLNGLESELAELDEEIEryeeqreqarETRDEADEVLEEHEErrEELE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 728 EMEDTLNKLQEA-EIKVKELDVLQAKCNEQTKLIGSLTQQI----------RASEEKLLD-LAALQKANSEGKLEIQKLS 795
Cdd:PRK02224 255 TLEAEIEDLRETiAETEREREELAEEVRDLRERLEELEEERddllaeagldDADAEAVEArREELEDRDEELRDRLEECR 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 796 EQLQAAEKQIQN-------LETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAvnqvkdsLEKELQLLKEKFTSAVDGA 868
Cdd:PRK02224 335 VAAQAHNEEAESlredaddLEERAEELREEAAELESELEEAREAVEDRREEIEE-------LEEEIEELRERFGDAPVDL 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 869 ENAqramqetinklnqkEEQFALMSSELEQLKSNLTVMETKLKEREER----EQQLTEAKV-KLENDI--AEIMKSSGDS 941
Cdd:PRK02224 408 GNA--------------EDFLEELREERDELREREAELEATLRTARERveeaEALLEAGKCpECGQPVegSPHVETIEED 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 942 SAQLMKMNDELRLKERQLEQIQLELTKAnEKAVQLQKNVEQTAQKAEQSqQETLKTHQEELKKMQDQLTDMKKQMEtsqn 1021
Cdd:PRK02224 474 RERVEELEAELEDLEEEVEEVEERLERA-EDLVEAEDRIERLEERREDL-EELIAERRETIEEKRERAEELRERAA---- 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1022 qykDLQAKYEKETSEMITKHDAdikgfkqnlldAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSvLASARKEIELMS 1101
Cdd:PRK02224 548 ---ELEAEAEEKREAAAEAEEE-----------AEEAREEVAELNSKLAELKERIESLERIRTLLAA-IADAEDEIERLR 612
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359610 1102 DKmRDLISEKETLAQERNTLKLEKESLLSQHLEmESKILLVQQDREELWTKNEELNSE 1159
Cdd:PRK02224 613 EK-REALAELNDERRERLAEKRERKRELEAEFD-EARIEEAREDKERAEEYLEQVEEK 668
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1002-1552 |
2.59e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 52.73 E-value: 2.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1002 LKKMQDQLTDMKKQMEtsQNQYKDLQAK---YEKETSEMitkhDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKK 1078
Cdd:PRK02224 182 LSDQRGSLDQLKAQIE--EKEEKDLHERlngLESELAEL----DEEIERYEEQREQARETRDEADEVLEEHEERREELET 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1079 QAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTL-------KLEKESLLSQHLEMESKILLVQQDREELWT 1151
Cdd:PRK02224 256 LEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLlaeagldDADAEAVEARREELEDRDEELRDRLEECRV 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1152 KNEELNSENKKILkqKEAAEAKSRQESTEkvaliSEKSKLLSEIETAQADLLKITQENDALRSsestllqqlkELQANKD 1231
Cdd:PRK02224 336 AAQAHNEEAESLR--EDADDLEERAEELR-----EEAAELESELEEAREAVEDRREEIEELEE----------EIEELRE 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1232 AVDVACQkhikEREELEHYQKLLEEN-DRVIKDKDDVIQRLQSSYDDLARNQR--------ELLQEVS----ILTAERDS 1298
Cdd:PRK02224 399 RFGDAPV----DLGNAEDFLEELREErDELREREAELEATLRTARERVEEAEAlleagkcpECGQPVEgsphVETIEEDR 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1299 AQEKDL-----DLKSTHIALKNEIDcLLQTNRSLQSEKEMLLKSRE---ELCVSLANTANEN----QALKLRKDEMQTEL 1366
Cdd:PRK02224 475 ERVEELeaeleDLEEEVEEVEERLE-RAEDLVEAEDRIERLEERREdleELIAERRETIEEKreraEELRERAAELEAEA 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1367 ETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNS-EKIHLLQEALFASEQRLLAEREELVNENKAVTEKL-TKA 1444
Cdd:PRK02224 554 EEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERiRTLLAAIADAEDEIERLREKREALAELNDERRERLaEKR 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1445 TADAVLAETAFTEKINELNLEKEsvfskslQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKR-EQELDFSAKR 1523
Cdd:PRK02224 634 ERKRELEAEFDEARIEEAREDKE-------RAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEElRERREALENR 706
|
570 580 590
....*....|....*....|....*....|....
gi 2024359610 1524 L-----LVQENTTLKYSIEALEEELKKKNLENQE 1552
Cdd:PRK02224 707 VealeaLYDEAEELESMYGDLRAELRQRNVETLE 740
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
737-1259 |
3.15e-06 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 52.45 E-value: 3.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 737 QEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGS 816
Cdd:pfam07111 63 QQAELISRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELDALAVAEKAGQAEAEGLRAALAGAEMVRKNLEEGSQREL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 817 SKVSNLTKELQGKEQKLLdlEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSEL 896
Cdd:pfam07111 143 EEIQRLHQEQLSSLTQAH--EEALSSLTSKAEGLEKSLNSLETKRAGEAKQLAEAQKEAELLRKQLSKTQEELEAQVTLV 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 897 EQLKSNL---TVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQL-------------- 959
Cdd:pfam07111 221 ESLRKYVgeqVPPEVHSQTWELERQELLDTMQHLQEDRADLQATVELLQVRVQSLTHMLALQEEELtrkiqpsdslepef 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 960 -EQIQLELTKANEKAVQLQknVEQTAQKAEQSqqETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEM- 1037
Cdd:pfam07111 301 pKKCRSLLNRWREKVFALM--VQLKAQDLEHR--DSVKQLRGQVAELQEQVTSQSQEQAILQRALQDKAAEVEVERMSAk 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1038 -----ITKHDADIKGFKQNLLDAEEALK----AAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIElmsdKMRDLI 1108
Cdd:pfam07111 377 glqmeLSRAQEARRRQQQQTASAEEQLKfvvnAMSSTQIWLETTMTRVEQAVARIPSLSNRLSYAVRKVH----TIKGLM 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1109 SEKETLAQerntLKLEKESLLSQHLEMESKILL-VQQDREELWTKNEELNSENKKIlkQKEAAEAKSRQEStEKVALISE 1187
Cdd:pfam07111 453 ARKVALAQ----LRQESCPPPPPAPPVDADLSLeLEQLREERNRLDAELQLSAHLI--QQEVGRAREQGEA-ERQQLSEV 525
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1188 KSKLLSEIETAQADLLKITQENDALRSSESTLLQQL----KELQANKDAVDVACQKHIKE-----REELEHYQKLLEEND 1258
Cdd:pfam07111 526 AQQLEQELQRAQESLASVGQQLEVARQGQQESTEEAaslrQELTQQQEIYGQALQEKVAEvetrlREQLSDTKRRLNEAR 605
|
.
gi 2024359610 1259 R 1259
Cdd:pfam07111 606 R 606
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1396-2068 |
3.58e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 52.66 E-value: 3.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1396 EMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKS-- 1473
Cdd:TIGR00618 179 TQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLkk 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1474 -------------LQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKRE----QELDFSAKRLLVQENTTLKYSI 1536
Cdd:TIGR00618 259 qqllkqlrarieeLRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIhtelQSKMRSRAKLLMKRAAHVKQQS 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1537 EALEEELKKKNLENQE-LIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRErtelQDKCQK 1615
Cdd:TIGR00618 339 SIEEQRRLLQTLHSQEiHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQRE----QATIDT 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1616 LTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEK---EKSETKLEEVIK 1692
Cdd:TIGR00618 415 RTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEqihLQETRKKAVVLA 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1693 EKMILYKETEQLASKIEQLKSDFTSLSVSKA------ELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKS 1766
Cdd:TIGR00618 495 RLLELQEEPCPLCGSCIHPNPARQDIDNPGPltrrmqRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSI 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1767 LVIINEEILKEKEKLSKEyyklhekVVALLEQTDADFSCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEAD 1846
Cdd:TIGR00618 575 LTQCDNRSKEDIPNLQNI-------TVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTA 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1847 KRAEEVLQTMEKVTKEKDAIHQEKIETLASlensrqtNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEF 1926
Cdd:TIGR00618 648 LHALQLTLTQERVREHALSIRVLPKELLAS-------RQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREF 720
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1927 EALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMK-KRESTLKKEIDEERASLQKSISD 2005
Cdd:TIGR00618 721 NEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTgAELSHLAAEIQFFNRLREEDTHL 800
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359610 2006 TSALITQ-----KDEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQ 2068
Cdd:TIGR00618 801 LKTLEAEigqeiPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQ 868
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
670-1430 |
6.73e-06 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 51.62 E-value: 6.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 670 DYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKA----KLESVEDQHLVEMEDTLNKLQEAEIKVKE 745
Cdd:COG5022 814 SYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRfsllKKETIYLQSAQRVELAERQLQELKIDVKS 893
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 746 LDVLQAKCNEQTKLIGSLTQQIRASeeklldlaalqkansegkleiqkLSEQLQAAEKQIQNLETEKVGGSSKVSNLTK- 824
Cdd:COG5022 894 ISSLKLVNLELESEIIELKKSLSSD-----------------------LIENLEFKTELIARLKKLLNNIDLEEGPSIEy 950
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 825 ELQGKEQKLLDLEKNLSAVNQVKDSLEKElqllkekftsavdgaenaqraMQETINKLNQKEEQFALMSSELEQLKSNLT 904
Cdd:COG5022 951 VKLPELNKLHEVESKLKETSEEYEDLLKK---------------------STILVREGNKANSELKNFKKELAELSKQYG 1009
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 905 VMETKLKEREEREQQLTEakvkLENDIAeIMKSSGDSSAQLMKMNDELRLKERQLEQiqlelTKANEKAVQLQknveqta 984
Cdd:COG5022 1010 ALQESTKQLKELPVEVAE----LQSASK-IISSESTELSILKPLQKLKGLLLLENNQ-----LQARYKALKLR------- 1072
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 985 qkaeqsqqetlkthqeelKKMQDQLTDMKKQMETSQNQYKDLQAKyeketsemitkhdaDIKGFKQNLLDAEEAL---KA 1061
Cdd:COG5022 1073 ------------------RENSLLDDKQLYQLESTENLLKTINVK--------------DLEVTNRNLVKPANVLqfiVA 1120
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1062 AQKKNDELetqaEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILL 1141
Cdd:COG5022 1121 QMIKLNLL----QEISKFLSQLVNTLEPVFQKLSVLQLELDGLFWEANLEALPSPPPFAALSEKRLYQSALYDEKSKLSS 1196
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1142 VQQdrEELWTKNEELNSENKKILKQkeaaeAKSRQESTEKVALISEKSKLLSEIEtaQADLLKITQENdalRSSEStLLQ 1221
Cdd:COG5022 1197 SEV--NDLKNELIALFSKIFSGWPR-----GDKLKKLISEGWVPTEYSTSLKGFN--NLNKKFDTPAS---MSNEK-LLS 1263
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1222 QLKELQankdavDVACQKHIKEREELEHYQKLLEENDrvikdkddviqrlQSSYDDLARNQRELLQEVSiLTAERDSAQE 1301
Cdd:COG5022 1264 LLNSID------NLLSSYKLEEEVLPATINSLLQYIN-------------VGLFNALRTKASSLRWKSA-TEVNYNSEEL 1323
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1302 KDLDLKSTHIALKNEIDCLLQTNRSLQSEKEML--LKSREELCVSLANTanENQALKLRKDEMQTELETEREKLEKMTKD 1379
Cdd:COG5022 1324 DDWCREFEISDVDEELEELIQAVKVLQLLKDDLnkLDELLDACYSLNPA--EIQNLKSRYDPADKENNLPKEILKKIEAL 1401
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|.
gi 2024359610 1380 NMDLKASLSSLSnFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREEL 1430
Cdd:COG5022 1402 LIKQELQLSLEG-KDETEVHLSEIFSEEKSLISLDRNSIYKEEVLSSLSAL 1451
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
615-1978 |
7.45e-06 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 51.59 E-value: 7.45e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 615 KENSDVIELWKSKLESAIASHQQAMEELKVSFN----KGVGAQTAEFAELKTQMEKVKLDYenemsNLKLKQENEKSQHL 690
Cdd:TIGR01612 503 KDFKDIIDFMELYKPDEVPSKNIIGFDIDQNIKaklyKEIEAGLKESYELAKNWKKLIHEI-----KKELEEENEDSIHL 577
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 691 -KEIEALKAKLLEVTEE----KEQTLEnLKAKLESVED--QHLVEMEDTLNKLQEAEIKVKELDVLQA-KCNEQTKLIGS 762
Cdd:TIGR01612 578 eKEIKDLFDKYLEIDDEiiyiNKLKLE-LKEKIKNISDknEYIKKAIDLKKIIENNNAYIDELAKISPyQVPEHLKNKDK 656
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 763 LTQQIRASEEKLL--DLAALQKA-----------NSEGKLEIQKLSEQLQAAEKQIQNLETEKVGgsskvSNLTKeLQGK 829
Cdd:TIGR01612 657 IYSTIKSELSKIYedDIDALYNElssivkenaidNTEDKAKLDDLKSKIDKEYDKIQNMETATVE-----LHLSN-IENK 730
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 830 EQKLLDLEKNLSavNQVKDSLEKELQLLKEKFtsavdgaENAQRAMQETINKLNQKEEQFALMSSELEQLKSNL------ 903
Cdd:TIGR01612 731 KNELLDIIVEIK--KHIHGEINKDLNKILEDF-------KNKEKELSNKINDYAKEKDELNKYKSKISEIKNHYndqini 801
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 904 -TVMETKLKEREEREQQLTEAKVKLENDIAEIMKssgdssaQLMKMNDELrlkerqleqiqleLTKANeKAVQLQKNVEQ 982
Cdd:TIGR01612 802 dNIKDEDAKQNYDKSKEYIKTISIKEDEIFKIIN-------EMKFMKDDF-------------LNKVD-KFINFENNCKE 860
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 983 TAQKAEQSQQETLKTHQEELKkmQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADikGFKQNLLDAEEALKAA 1062
Cdd:TIGR01612 861 KIDSEHEQFAELTNKIKAEIS--DDKLNDYEKKFNDSKSLINEINKSIEEEYQNINTLKKVD--EYIKICENTKESIEKF 936
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1063 QKKNDELEtqaEELKKQAEQAKSLSSVLASARKEIElmsdkmrdlisekETLAQERNTL-KLEKESLLSQHLEMESKILL 1141
Cdd:TIGR01612 937 HNKQNILK---EILNKNIDTIKESNLIEKSYKDKFD-------------NTLIDKINELdKAFKDASLNDYEAKNNELIK 1000
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1142 VQQDREELWTKNEElnsenkKILKQKEAAEAKSRQESTEKvalISEKSKLLSEIETA-QADLLKITQENDAL--RSSEST 1218
Cdd:TIGR01612 1001 YFNDLKANLGKNKE------NMLYHQFDEKEKATNDIEQK---IEDANKNIPNIEIAiHTSIYNIIDEIEKEigKNIELL 1071
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1219 LLQQLKELQANkdavdVACQKHIKEREELEHYQKLLEENDrvIKDKDDViqrlQSSYDDLARNQRELLQEVSILTAERDS 1298
Cdd:TIGR01612 1072 NKEILEEAEIN-----ITNFNEIKEKLKHYNFDDFGKEEN--IKYADEI----NKIKDDIKNLDQKIDHHIKALEEIKKK 1140
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1299 AQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMllksrEELCVSLANTANENQALKLRKDEMqTELETEREKLEKMTK 1378
Cdd:TIGR01612 1141 SENYIDEIKAQINDLEDVADKAISNDDPEEIEKKI-----ENIVTKIDKKKNIYDEIKKLLNEI-AEIEKDKTSLEEVKG 1214
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1379 DNMDLKASLSSLsnFLEEMKSSREASnsekihllqEALFASEQRLLAEREELvnenkavtEKLTKATADAVLAETAFTEK 1458
Cdd:TIGR01612 1215 INLSYGKNLGKL--FLEKIDEEKKKS---------EHMIKAMEAYIEDLDEI--------KEKSPEIENEMGIEMDIKAE 1275
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1459 INELNLEKESVFSKSLQFEKHNEAL--LREKD----ELERKYSELLDEKKSLENAFSDMKREQeldfSAKRLLVQENTTL 1532
Cdd:TIGR01612 1276 METFNISHDDDKDHHIISKKHDENIsdIREKSlkiiEDFSEESDINDIKKELQKNLLDAQKHN----SDINLYLNEIANI 1351
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1533 kYSIEALEeelKKKNLENQeliacrsdLSDLLKEAQDARRTLENELAAVSHAKQVL--SSSFNTCSSDIEilnrerTELQ 1610
Cdd:TIGR01612 1352 -YNILKLN---KIKKIIDE--------VKEYTKEIEENNKNIKDELDKSEKLIKKIkdDINLEECKSKIE------STLD 1413
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1611 DKcqKLTGEVENMKENltvekKARILDKES----FLLERMELQNNIGFLEKEVEEMREKNKEFLTEKE------------ 1674
Cdd:TIGR01612 1414 DK--DIDECIKKIKEL-----KNHILSEESnidtYFKNADENNENVLLLFKNIEMADNKSQHILKIKKdnatndhdfnin 1486
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1675 LLVQEKEKSETKLEEVIKEKmilyKETEQLASKIEQLKSDFTSLSVSKAELedvhscvsvmldELQHKYEVTEKEKMELV 1754
Cdd:TIGR01612 1487 ELKEHIDKSKGCKDEADKNA----KAIEKNKELFEQYKKDVTELLNKYSAL------------AIKNKFAKTKKDSEIII 1550
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1755 QENESLHaewKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSCRLLVSEGKHELLleEMSNLALK----LRE 1830
Cdd:TIGR01612 1551 KEIKDAH---KKFILEAEKSEQKIKEIKKEKFRIEDDAAKNDKSNKAAIDIQLSLENFENKFL--KISDIKKKindcLKE 1625
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1831 IERLQAQ-------TFMQKFEADKRAEEVLQT-MEKVTKEKDAIHQEKIEtlasLENSRQTNEKLQNELDMLKQN----- 1897
Cdd:TIGR01612 1626 TESIEKKissfsidSQDTELKENGDNLNSLQEfLESLKDQKKNIEDKKKE----LDELDSEIEKIEIDVDQHKKNyeigi 1701
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1898 -------NLKNEEELTKSKELLnleNKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEE 1970
Cdd:TIGR01612 1702 iekikeiAIANKEEIESIKELI---EPTIENLISSFNTNDLEGIDPNEKLEEYNTEIGDIYEEFIELYNIIAGCLETVSK 1778
|
....*...
gi 2024359610 1971 RSVLNNQL 1978
Cdd:TIGR01612 1779 EPITYDEI 1786
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1834-2141 |
9.82e-06 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 51.23 E-value: 9.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1834 LQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIhqeKIETLASLENSRQ-------TNEKLQNELDMLKQNNLKNEEELT 1906
Cdd:COG5022 765 LQALKRIKKIQVIQHGFRLRRLVDYELKWRLFI---KLQPLLSLLGSRKeyrsylaCIIKLQKTIKREKKLRETEEVEFS 841
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1907 KSKELLNLENKKVEELKKEFEALKlaaaqKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRES 1986
Cdd:COG5022 842 LKAEVLIQKFGRSLKAKKRFSLLK-----KETIYLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLS 916
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1987 T---LKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGE---NASAKTLQSVVKTLE---SDKLKLEEKVKN 2057
Cdd:COG5022 917 SdliENLEFKTELIARLKKLLNNIDLEEGPSIEYVKLPELNKLHEVEsklKETSEEYEDLLKKSTilvREGNKANSELKN 996
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 2058 LEQKLKAKSEQPLTVTSPSGDiaANLLQDESAEdKQQEIDFLNSVIVDLQRRNEELNLKiqRMCEAALNGNEEETINYDS 2137
Cdd:COG5022 997 FKKELAELSKQYGALQESTKQ--LKELPVEVAE-LQSASKIISSESTELSILKPLQKLK--GLLLLENNQLQARYKALKL 1071
|
....
gi 2024359610 2138 EEEG 2141
Cdd:COG5022 1072 RREN 1075
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1079-1302 |
1.13e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 1.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1079 QAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNS 1158
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1159 ---ENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQEN-DALRSSESTLLQQLKELQANKDAVD 1234
Cdd:COG4942 98 eleAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQaEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359610 1235 VACQKHIKEREELEhyqKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEK 1302
Cdd:COG4942 178 ALLAELEEERAALE---ALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
357-531 |
1.18e-05 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 50.63 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 357 ALKEKQQHIEQLLAE---RDLERAEVAKATS-----------HVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEAAD 422
Cdd:COG2433 347 AYKNKFERVEKKVPPdvdRDEVKARVIRGLSieealeeliekELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLE 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 423 REKVELLNQLEEEKRKVEDLQFRVEEESItkgdlERKRQISEDPEntQTKLEhARIKELEQSLLFEKTKADKLQRELEDT 502
Cdd:COG2433 427 AEVEELEAELEEKDERIERLERELSEARS-----EERREIRKDRE--ISRLD-REIERLERELEEERERIEELKRKLERL 498
|
170 180 190
....*....|....*....|....*....|
gi 2024359610 503 RvatvseksRIMELE-RDLALRVKEVAELR 531
Cdd:COG2433 499 K--------ELWKLEhSGELVPVKVVEKFT 520
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
704-924 |
1.58e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 50.02 E-value: 1.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 704 TEEKEQTLENLKAKLESVEDQhlvemedtlnkLQEAEIKVKELdvlqakcnEQTKLIGSLTQQIRASEEKLldlAALQKA 783
Cdd:COG3206 170 REEARKALEFLEEQLPELRKE-----------LEEAEAALEEF--------RQKNGLVDLSEEAKLLLQQL---SELESQ 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 784 NSEGKLEIQKLSEQLQAAEKQIQNLETE--KVGGSSKVSNLTKELQGKEQKLLDLEKNLSA-----------VNQVKDSL 850
Cdd:COG3206 228 LAEARAELAEAEARLAALRAQLGSGPDAlpELLQSPVIQQLRAQLAELEAELAELSARYTPnhpdvialraqIAALRAQL 307
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024359610 851 EKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAK 924
Cdd:COG3206 308 QQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEARLAE 381
|
|
| AAA_13 |
pfam13166 |
AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA ... |
640-854 |
1.58e-05 |
|
AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. This family includes the PrrC protein that is thought to be the active component of the anticodon nuclease.
Pssm-ID: 463796 [Multi-domain] Cd Length: 712 Bit Score: 50.06 E-value: 1.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 640 EELKVSFNKgvgaqtaEFAELKTQMEKVKLDYENEMSNL--KLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAK 717
Cdd:pfam13166 271 AALEAHFDD-------EFTEFQNRLQKLIEKVESAISSLlaQLPAVSDLASLLSAFELDVEDIESEAEVLNSQLDGLRRA 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 718 LESVEDQ--HLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLdlaalqkaNSEGKLEIQKLS 795
Cdd:pfam13166 344 LEAKRKDpfKSIELDSVDAKIESINDLVASINELIAKHNEITDNFEEEKNKAKKKLRLHL--------VEEFKSEIDEYK 415
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359610 796 EQLQAAEKQIQNLETEKvggsskvSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKEL 854
Cdd:pfam13166 416 DKYAGLEKAINSLEKEI-------KNLEAEIKKLREEIKELEAQLRDHKPGADEINKLL 467
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
691-925 |
1.84e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 50.02 E-value: 1.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 691 KEIEALKAKLlevtEEKEQTLENLKAKLESVEDQhlVEMEDTLNKLQEAEikvKELDVLQAKCNEQTKLIGSLTQQIRAS 770
Cdd:COG3206 182 EQLPELRKEL----EEAEAALEEFRQKNGLVDLS--EEAKLLLQQLSELE---SQLAEARAELAEAEARLAALRAQLGSG 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 771 EEKLLDLAALQkansegklEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLdleknlSAVNQVKDSL 850
Cdd:COG3206 253 PDALPELLQSP--------VIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQ------QEAQRILASL 318
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359610 851 EKELQLLKEKftsaVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKE-REEREQQLTEAKV 925
Cdd:COG3206 319 EAELEALQAR----EASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEaRLAEALTVGNVRV 390
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
622-1374 |
2.01e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 49.96 E-value: 2.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 622 ELWKSKleSAIASHQQAMEELKvsfnkgvgaqtAEFAELKTQMEKVKLDYENEMSNLKLKQENEKSQhlKEIEALKAKLL 701
Cdd:PRK04863 294 ELYTSR--RQLAAEQYRLVEMA-----------RELAELNEAESDLEQDYQAASDHLNLVQTALRQQ--EKIERYQADLE 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 702 EVTEEkeqtlenLKAKLESVEDQHLvEMEDTLNKLQEAEIKVKEL-----DVLQAKCNEQTKLIgSLTQQIRASEE--KL 774
Cdd:PRK04863 359 ELEER-------LEEQNEVVEEADE-QQEENEARAEAAEEEVDELksqlaDYQQALDVQQTRAI-QYQQAVQALERakQL 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 775 LDLAALQKANSEGKLEiqklseQLQAAEKQIqnletekvggsskvsnltkelqgkEQKLLDLEKNLSAVNQVKDSLEKEL 854
Cdd:PRK04863 430 CGLPDLTADNAEDWLE------EFQAKEQEA------------------------TEELLSLEQKLSVAQAAHSQFEQAY 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 855 QLLKekftsAVDGAENAQRAMQETINKLNQKEEQFALmSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKL---ENDI 931
Cdd:PRK04863 480 QLVR-----KIAGEVSRSEAWDVARELLRRLREQRHL-AEQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLgknLDDE 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 932 AEIMKSSGDSSAQLMKMNDELR-LKER------QLEQIQLELTK----------ANEKAVQLQknvEQTAQKAEQSQQ-- 992
Cdd:PRK04863 554 DELEQLQEELEARLESLSESVSeARERrmalrqQLEQLQARIQRlaarapawlaAQDALARLR---EQSGEEFEDSQDvt 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 993 ETLKTHQEELKKMQ---DQLTDMKKQMEtsqNQYKDLQAKYEKETSEM------------------ITKHDA-------- 1043
Cdd:PRK04863 631 EYMQQLLERERELTverDELAARKQALD---EEIERLSQPGGSEDPRLnalaerfggvllseiyddVSLEDApyfsalyg 707
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1044 ---------------------------------DIKGFKQNLLDAEEALKA-AQKKND-EL----------------ETQ 1072
Cdd:PRK04863 708 parhaivvpdlsdaaeqlagledcpedlyliegDPDSFDDSVFSVEELEKAvVVKIADrQWrysrfpevplfgraarEKR 787
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1073 AEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLA---------QERNTLKLEKESLLSQHlemESKIllvQ 1143
Cdd:PRK04863 788 IEQLRAEREELAERYATLSFDVQKLQRLHQAFSRFIGSHLAVAfeadpeaelRQLNRRRVELERALADH---ESQE---Q 861
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1144 QDREELWTKNEELNSENK-----KILK----QKEAAEAKSRQESTEKVAL-ISEKSKLLSEIETAQADLLKITQENDALR 1213
Cdd:PRK04863 862 QQRSQLEQAKEGLSALNRllprlNLLAdetlADRVEEIREQLDEAEEAKRfVQQHGNALAQLEPIVSVLQSDPEQFEQLK 941
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1214 SSESTLLQQLKELQANKDAVD--VACQKH-----------------IKEREELEHYQKLLEENDRVIKDKDD-------V 1267
Cdd:PRK04863 942 QDYQQAQQTQRDAKQQAFALTevVQRRAHfsyedaaemlaknsdlnEKLRQRLEQAEQERTRAREQLRQAQAqlaqynqV 1021
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1268 IQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKsthialKNEIDCLLQTNRSLQSEKEMLLKSREElcvslan 1347
Cdd:PRK04863 1022 LASLKSSYDAKRQMLQELKQELQDLGVPADSGAEERARAR------RDELHARLSANRSRRNQLEKQLTFCEA------- 1088
|
890 900
....*....|....*....|....*..
gi 2024359610 1348 tANENQALKLRKdeMQTELETEREKLE 1374
Cdd:PRK04863 1089 -EMDNLTKKLRK--LERDYHEMREQVV 1112
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
983-1228 |
2.03e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 49.44 E-value: 2.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 983 TAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKyeketsemITKHDADIKGFKQNLLDAEEALKAA 1062
Cdd:COG3883 13 FADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAE--------LEALQAEIDKLQAEIAEAEAEIEER 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1063 QkknDELETQAEELKKQAEQAKSLSSVLASA--------RKEIELMSDKMRDLISEketLAQERNTLKLEKESLlsqhle 1134
Cdd:COG3883 85 R---EELGERARALYRSGGSVSYLDVLLGSEsfsdfldrLSALSKIADADADLLEE---LKADKAELEAKKAEL------ 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1135 meskillvQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRS 1214
Cdd:COG3883 153 --------EAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAA 224
|
250
....*....|....
gi 2024359610 1215 SESTLLQQLKELQA 1228
Cdd:COG3883 225 AAAAAAAAAAAAAA 238
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
353-917 |
2.10e-05 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 50.04 E-value: 2.10e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 353 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlvrdghdrHVLEMEAKMDQLRAMVEAADREKVELLNQL 432
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERRE--------ELETLEAEIEDLRETIAETEREREELAEEV 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 433 EEEKRKVEDLQfrvEEESITKGDLERKRQISEDPEntqtklehARIKELEqsllfekTKADKLQRELEDTRV---ATVSE 509
Cdd:PRK02224 282 RDLRERLEELE---EERDDLLAEAGLDDADAEAVE--------ARREELE-------DRDEELRDRLEECRVaaqAHNEE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 510 KSRIMELERDLALRVKEVAELRGRLESS-----KHIDDVDTSLSLL-QEISSLQEKMAAAGKEHQrEMSSLKEKFESSEE 583
Cdd:PRK02224 344 AESLREDADDLEERAEELREEAAELESEleearEAVEDRREEIEELeEEIEELRERFGDAPVDLG-NAEDFLEELREERD 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 584 ALRKEIKTLSASNERMGKENESLKTKLDhANKENSDVIELWKSKLESAIASHQQAMEELkvsfnkgvgaqTAEFAELKTQ 663
Cdd:PRK02224 423 ELREREAELEATLRTARERVEEAEALLE-AGKCPECGQPVEGSPHVETIEEDRERVEEL-----------EAELEDLEEE 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 664 MEKVKLDYENEMSNLKLKQENEKSQHLKE-IEALKAKLLEVTEEKEQTLENLKAKLESVEDqhlvEMEDTLNKLQEAEIK 742
Cdd:PRK02224 491 VEEVEERLERAEDLVEAEDRIERLEERREdLEELIAERRETIEEKRERAEELRERAAELEA----EAEEKREAAAEAEEE 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 743 VKELDVLQAKCNEQtkligslTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLqaaeKQIQNLETEKVGGSSKVSNL 822
Cdd:PRK02224 567 AEEAREEVAELNSK-------LAELKERIESLERIRTLLAAIADAEDEIERLREKR----EALAELNDERRERLAEKRER 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 823 TKELQGKEQklldlEKNLSAVNQVKDSLEKELqllkEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSN 902
Cdd:PRK02224 636 KRELEAEFD-----EARIEEAREDKERAEEYL----EQVEEKLDELREERDDLQAEIGAVENELEELEELRERREALENR 706
|
570
....*....|....*
gi 2024359610 903 LTVMETKLKEREERE 917
Cdd:PRK02224 707 VEALEALYDEAEELE 721
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1592-2118 |
2.19e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 49.63 E-value: 2.19e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1592 FNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTVEKKARILDKESFLLERMELQNnigfLEKEVEEMREKNKEFLT 1671
Cdd:TIGR04523 70 INNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNK----LEKQKKENKKNIDKFLT 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1672 EKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHScvsvMLDELQHKYEVTEKEKM 1751
Cdd:TIGR04523 146 EIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLS----NLKKKIQKNKSLESQIS 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1752 ELVQENESLHAEWKSLviiNEEILKEKEKLSKEYYKL------HEKVVALLEQTDADfscrLLVSEGKHELLLEEMSNLA 1825
Cdd:TIGR04523 222 ELKKQNNQLKDNIEKK---QQEINEKTTEISNTQTQLnqlkdeQNKIKKQLSEKQKE----LEQNNKKIKELEKQLNQLK 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1826 LKLREIERLQAQTFMQKF--EADKRAEEVLQTMEKVTKEKDAIHQ--EKIETL-ASLENSRQTNEKLQNELDMlKQNNLK 1900
Cdd:TIGR04523 295 SEISDLNNQKEQDWNKELksELKNQEKKLEEIQNQISQNNKIISQlnEQISQLkKELTNSESENSEKQRELEE-KQNEIE 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1901 --NEEELTKSKELLNLENKKvEELKKEFEALKLAAAQKSQQLAALQEENVKLAEElgrsrdevtsHQKLEEERSVLNNQL 1978
Cdd:TIGR04523 374 klKKENQSYKQEIKNLESQI-NDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKE----------IERLKETIIKNNSEI 442
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1979 LEMKKRESTLKKEIDE---ERASLQKSISDTSALITQKDEELEKLRNEITV----LRGENASAKTLQSVVKTLESDKLKL 2051
Cdd:TIGR04523 443 KDLTNQDSVKELIIKNldnTRESLETQLKVLSRSINKIKQNLEQKQKELKSkekeLKKLNEEKKELEEKVKDLTKKISSL 522
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 2052 EEKVKNLEQKLKAKSEQPLTVTSPSGDIAANLLQD---ESAEDKQQEIDFLNSVIVDLQRRNEELNLKIQ 2118
Cdd:TIGR04523 523 KEKIEKLESEKKEKESKISDLEDELNKDDFELKKEnleKEIDEKNKEIEELKQTQKSLKKKQEEKQELID 592
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1990-2120 |
2.50e-05 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 49.47 E-value: 2.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1990 KEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASaktlqsvvktLESDKLKLEEKVKNLEQKLK-AKSEQ 2068
Cdd:COG2433 388 KELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEE----------LEAELEEKDERIERLERELSeARSEE 457
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 2024359610 2069 PltvtspsgdiaANLLQDESAEDKQQEIDFLNSVIVDLQRRNEELNLKIQRM 2120
Cdd:COG2433 458 R-----------REIRKDREISRLDREIERLERELEEERERIEELKRKLERL 498
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
805-1492 |
2.65e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 49.84 E-value: 2.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 805 IQNLETEKVGGSSKVSNLTKE--LQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKL 882
Cdd:pfam12128 148 IQNDRTLLGRERVELRSLARQfaLCDSESPLRHIDKIAKAMHSKEGKFRDVKSMIVAILEDDGVVPPKSRLNRQQVEHWI 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 883 NQKEEQFALMSSELEQLKsnltvMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQ- 961
Cdd:pfam12128 228 RDIQAIAGIMKIRPEFTK-----LQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEk 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 962 ---IQLELTKANEKAVQLQKNVEQTAQKAEQSQQ---ETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETS 1035
Cdd:pfam12128 303 rdeLNGELSAADAAVAKDRSELEALEDQHGAFLDadiETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRS 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1036 EMITKHDADIKGFKQNLLDA-EEALKAAQKKNDELETQAEELKKQAEQAKSLSSV----LASARKEIELMSDKMRDLISE 1110
Cdd:pfam12128 383 KIKEQNNRDIAGIKDKLAKIrEARDRQLAVAEDDLQALESELREQLEAGKLEFNEeeyrLKSRLGELKLRLNQATATPEL 462
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1111 KETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALIS---- 1186
Cdd:pfam12128 463 LLQLENFDERIERAREEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHflrk 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1187 -------EKSKLLSEIETAQADLlkITQENDALRSSESTLL------------------QQLK-ELQANKDAVDVACQKH 1240
Cdd:pfam12128 543 eapdweqSIGKVISPELLHRTDL--DPEVWDGSVGGELNLYgvkldlkridvpewaaseEELReRLDKAEEALQSAREKQ 620
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1241 IKEREELEHYQKLLEENDRvikDKDDVIQRLQSSYDDLAR----NQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNE 1316
Cdd:pfam12128 621 AAAEEQLVQANGELEKASR---EETFARTALKNARLDLRRlfdeKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKK 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1317 IDCLLQTNRSLQSEKEM-----LLKSREELCVSLA----NTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASL 1387
Cdd:pfam12128 698 HQAWLEEQKEQKREARTekqayWQVVEGALDAQLAllkaAIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREI 777
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1388 SSLSNFLEEMKSSREASNSEKIhLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAvlaetafteKINELNLEKE 1467
Cdd:pfam12128 778 RTLERKIERIAVRRQEVLRYFD-WYQETWLQRRPRLATQLSNIERAISELQQQLARLIADT---------KLRRAKLEME 847
|
730 740
....*....|....*....|....*
gi 2024359610 1468 SVFSKSLQFEKhNEALLREKDELER 1492
Cdd:pfam12128 848 RKASEKQQVRL-SENLRGLRCEMSK 871
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1824-2023 |
2.96e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.53 E-value: 2.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1824 LALKLREIERLQAQtfmqKFEADKRAEEVLQTMEKVTKEKDAIHQekietLASLENSRQTNEKLQNELdmlkqnnlkneE 1903
Cdd:COG4913 612 LAALEAELAELEEE----LAEAEERLEALEAELDALQERREALQR-----LAEYSWDEIDVASAEREI-----------A 671
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1904 ELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLN----NQLL 1979
Cdd:COG4913 672 ELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLArlelRALL 751
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 2024359610 1980 EMKKRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNE 2023
Cdd:COG4913 752 EERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
451-1110 |
3.13e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 49.51 E-value: 3.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 451 ITKGDLERKRQISEDPENTQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAEL 530
Cdd:PRK01156 144 ISGDPAQRKKILDEILEINSLERNYDKLKDVIDMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERL 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 531 RGRLES-SKHIDDVDTSL----SLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMgkeNES 605
Cdd:PRK01156 224 SIEYNNaMDDYNNLKSALnelsSLEDMKNRYESEIKTAESDLSMELEKNNYYKELEERHMKIINDPVYKNRNYI---NDY 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 606 LKTKLDHANKenSDVIELWKSKLESAIASHQQAmEELKVSFNkgvgaqtaEFAELKTQMEkvklDYENEMSNLKLKQENE 685
Cdd:PRK01156 301 FKYKNDIENK--KQILSNIDAEINKYHAIIKKL-SVLQKDYN--------DYIKKKSRYD----DLNNQILELEGYEMDY 365
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 686 KSqHLKEIEALKAKLlevtEEKEQTLENLKAKLESVEDQHLVEmedtlnklqeAEIKVKELDVLQAKCNEQTKLIGSLTQ 765
Cdd:PRK01156 366 NS-YLKSIESLKKKI----EEYSKNIERMSAFISEILKIQEID----------PDAIKKELNEINVKLQDISSKVSSLNQ 430
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 766 QIRASEEKLLDLAA-LQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVN 844
Cdd:PRK01156 431 RIRALRENLDELSRnMEMLNGQSVCPVCGTTLGEEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLE 510
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 845 QVK-DSLEKELQLLKEKFTSAVDgAENAQRAMQETINKLNQKEEQFAlmSSELEQLKSNLTV------------METKLK 911
Cdd:PRK01156 511 SEEiNKSINEYNKIESARADLED-IKIKINELKDKHDKYEEIKNRYK--SLKLEDLDSKRTSwlnalavislidIETNRS 587
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 912 EREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQlELTKANEKavqLQKNVEQtaqkaeqsq 991
Cdd:PRK01156 588 RSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNEIQ-ENKILIEK---LRGKIDN--------- 654
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 992 qetLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKhDADIKGFKQNLLDAEEALKAAQKKNDELET 1071
Cdd:PRK01156 655 ---YKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARL-ESTIEILRTRINELSDRINDINETLESMKK 730
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 2024359610 1072 --QAEELKKQAEQAKSLSSVLASARKEI-ELMSDKMRDLISE 1110
Cdd:PRK01156 731 ikKAIGDLKRLREAFDKSGVPAMIRKSAsQAMTSLTRKYLFE 772
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1867-2149 |
3.37e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 49.28 E-value: 3.37e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1867 HQEKIETLASLENSRQTNEKLQN-------ELDMLKQNNLKNEEELTKSKELLNLE----NKKVEELKKEFEALKLAAAQ 1935
Cdd:TIGR02168 171 KERRKETERKLERTRENLDRLEDilnelerQLKSLERQAEKAERYKELKAELRELElallVLRLEELREELEELQEELKE 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1936 KSQQLAALQEENVKLAEELGRSRDEVTS-HQKLEEERSVLNNQLLEMKKRESTlKKEIDEERASLQKSISDTSALITQKD 2014
Cdd:TIGR02168 251 AEEELEELTAELQELEEKLEELRLEVSElEEEIEELQKELYALANEISRLEQQ-KQILRERLANLERQLEELEAQLEELE 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 2015 EELEKLRNEITVLRGENASaktLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVtspSGDIAANLLQDESAEDKQQ 2094
Cdd:TIGR02168 330 SKLDELAEELAELEEKLEE---LKEELESLEAELEELEAELEELESRLEELEEQLETL---RSKVAQLELQIASLNNEIE 403
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359610 2095 EID-FLNSVIVDLQRRNEELNLKIQRMCEAALNGNEEETINYDSEEEGLSKKTPRL 2149
Cdd:TIGR02168 404 RLEaRLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERL 459
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1701-2068 |
3.56e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 49.30 E-value: 3.56e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1701 TEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQH------KYEVTEKEKMELvqENESLHAEWKSLVIINEEI 1774
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRRerekaeRYQALLKEKREY--EGYELLKEKEALERQKEAI 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1775 LKEKEKLSKEYYKLHEKVVALLEQTDAdfscrllvsegkHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRA----- 1849
Cdd:TIGR02169 243 ERQLASLEEELEKLTEEISELEKRLEE------------IEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASlersi 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1850 EEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKqnnlkneEELTKSKELLNLENKKVEELKKEFEAL 1929
Cdd:TIGR02169 311 AEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLT-------EEYAELKEELEDLRAELEEVDKEFAET 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1930 KLAAAQKSQQLAALQEENVKLAEELGRSRDEvtshqkleeersvlnnqllemkkrestlKKEIDEERASLQKSISDTSAL 2009
Cdd:TIGR02169 384 RDELKDYREKLEKLKREINELKRELDRLQEE----------------------------LQRLSEELADLNAAIAGIEAK 435
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359610 2010 ITQKDEELEKLRNEITVLRGEnasAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQ 2068
Cdd:TIGR02169 436 INELEEEKEDKALEIKKQEWK---LEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRE 491
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1865-2068 |
4.16e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 4.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1865 AIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQ 1944
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1945 EENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEI 2024
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 2024359610 2025 TVLRGENASAKtlqsvvKTLESDKLKLEEKVKNLEQKLKAKSEQ 2068
Cdd:COG4942 177 EALLAELEEER------AALEALKAERQKLLARLEKELAELAAE 214
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
676-924 |
4.30e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 4.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 676 SNLKLKQENEKSQHLKEIEALKAKLlevtEEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQeaeikvKELDVLQAKCNE 755
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKEL----AALKKEEKALLKQLAALERR-IAALARRIRALE------QELAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 756 QTKLIGSLTQQIRASEEKLLD-LAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEkvggSSKVSNLTKELQGKEQKLL 834
Cdd:COG4942 88 LEKEIAELRAELEAQKEELAElLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYL----APARREQAEELRADLAELA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 835 DLEKNLSAVNQVKDSLEKELQLLKEKFtsavdgaENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKERE 914
Cdd:COG4942 164 ALRAELEAERAELEALLAELEEERAAL-------EALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
250
....*....|
gi 2024359610 915 EREQQLTEAK 924
Cdd:COG4942 237 AAAAERTPAA 246
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1067-1639 |
5.75e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 48.36 E-value: 5.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1067 DELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDR 1146
Cdd:PRK01156 176 DMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYE 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1147 EELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVA---LISEKSKLLSEIEtaqaDLLKITQENDALRSSESTLLQQL 1223
Cdd:PRK01156 256 SEIKTAESDLSMELEKNNYYKELEERHMKIINDPVYKnrnYINDYFKYKNDIE----NKKQILSNIDAEINKYHAIIKKL 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1224 KELQANKDAVdvacQKHIKEREELEH-----------YQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSIL 1292
Cdd:PRK01156 332 SVLQKDYNDY----IKKKSRYDDLNNqilelegyemdYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAI 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1293 TAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLlkSREELCVSLANTANENQALKLRKD--EMQTELETER 1370
Cdd:PRK01156 408 KKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEML--NGQSVCPVCGTTLGEEKSNHIINHynEKKSRLEEKI 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1371 EKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEAL--FASEQRLLAER----EELVNENKAVTEKLTKA 1444
Cdd:PRK01156 486 REIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARADLedIKIKINELKDKhdkyEEIKNRYKSLKLEDLDS 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1445 TADAVLAETAFTEKINELNLEKesvfskslQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELdFSAKRL 1524
Cdd:PRK01156 566 KRTSWLNALAVISLIDIETNRS--------RSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANN-LNNKYN 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1525 LVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILN- 1603
Cdd:PRK01156 637 EIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSd 716
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 2024359610 1604 -----RERTELQDKCQKLTGEVENMKENLTVEKKARILDKE 1639
Cdd:PRK01156 717 rindiNETLESMKKIKKAIGDLKRLREAFDKSGVPAMIRKS 757
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1886-2057 |
6.41e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 46.84 E-value: 6.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1886 KLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRD--EVTS 1963
Cdd:COG1579 14 ELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNnkEYEA 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1964 HQK----LEEERSVLNNQLLEMKKRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGEnasaktLQS 2039
Cdd:COG1579 94 LQKeiesLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAE------REE 167
|
170
....*....|....*...
gi 2024359610 2040 VVKTLESDKLKLEEKVKN 2057
Cdd:COG1579 168 LAAKIPPELLALYERIRK 185
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
796-1098 |
6.43e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.37 E-value: 6.43e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 796 EQLQAAEKQIQNLETEkvggsskVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLlkekftsavdgaenaqRAM 875
Cdd:COG4913 610 AKLAALEAELAELEEE-------LAEAEERLEALEAELDALQERREALQRLAEYSWDEIDV----------------ASA 666
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 876 QETINKLNQKEEQFALMSSELEQLKSnltvmetKLKEREEREQQLTEAKVKLENDIAEImkssgdssaqlmkmndelrlk 955
Cdd:COG4913 667 EREIAELEAELERLDASSDDLAALEE-------QLEELEAELEELEEELDELKGEIGRL--------------------- 718
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 956 ERQLEQIQLELTkanekavQLQKNVEQTAQKAEQSQQETLKTHQEELKKmQDQLTDMKKQMETSQNQYKDLQAKYEKETS 1035
Cdd:COG4913 719 EKELEQAEEELD-------ELQDRLEAAEDLARLELRALLEERFAAALG-DAVERELRENLEERIDALRARLNRAEEELE 790
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024359610 1036 EMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQ---------AEELKKQAEQAKS-LSSVLASARKEIE 1098
Cdd:COG4913 791 RAMRAFNREWPAETADLDADLESLPEYLALLDRLEEDglpeyeerfKELLNENSIEFVAdLLSKLRRAIREIK 863
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
837-1093 |
7.47e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.52 E-value: 7.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 837 EKNLSAVNQVKDSLEKELQLLKEKftsavdgAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREER 916
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAE-------LDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 917 -EQQLTEAKVK-LENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQlELTKANEKAVQLQKNVEQTAQKAEQSQQEt 994
Cdd:COG3883 88 lGERARALYRSgGSVSYLDVLLGSESFSDFLDRLSALSKIADADADLLE-ELKADKAELEAKKAELEAKLAELEALKAE- 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 995 LKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAE 1074
Cdd:COG3883 166 LEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAS 245
|
250
....*....|....*....
gi 2024359610 1075 ELKKQAEQAKSLSSVLASA 1093
Cdd:COG3883 246 AAGAGAAGAAGAAAGSAGA 264
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
377-1597 |
8.74e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 47.86 E-value: 8.74e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 377 AEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVE---AADREKVELLNQLEEEKRKVEDLQFRVEEESitk 453
Cdd:pfam01576 12 EELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETElcaEAEEMRARLAARKQELEEILHELESRLEEEE--- 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 454 gdlERKRQISEDPENTQTKleharIKELEQSLLFEKTKADKLQREledtrvaTVSEKSRIMELERDLALrvkeVAELRGR 533
Cdd:pfam01576 89 ---ERSQQLQNEKKKMQQH-----IQDLEEQLDEEEAARQKLQLE-------KVTTEAKIKKLEEDILL----LEDQNSK 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 534 LESSKhiddvdtslSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESS----EEALRKEiktlsasnERMGKENESLKTK 609
Cdd:pfam01576 150 LSKER---------KLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMisdlEERLKKE--------EKGRQELEKAKRK 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 610 LDHANKENSDVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFA------ELKTQMEKVKLDYENEMSnLKLKQE 683
Cdd:pfam01576 213 LEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNalkkirELEAQISELQEDLESERA-ARNKAE 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 684 NEKSQHLKEIEALKAKLL----------EVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAeikvkeLDVLQAKC 753
Cdd:pfam01576 292 KQRRDLGEELEALKTELEdtldttaaqqELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQA------LEELTEQL 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 754 NEQTKLIGSLTQQIRASEEKLLDLAA----LQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGK 829
Cdd:pfam01576 366 EQAKRNKANLEKAKQALESENAELQAelrtLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESV 445
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 830 EQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTsavdgaenaqramQETINKLNqkeeqfalMSSELEQLKSNLTVMETK 909
Cdd:pfam01576 446 SSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQ-------------EETRQKLN--------LSTRLRQLEDERNSLQEQ 504
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 910 LKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQ 989
Cdd:pfam01576 505 LEEEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDD 584
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 990 S--QQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDAdikgFKQNLLDAEEALKAAQKKND 1067
Cdd:pfam01576 585 LlvDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEERDRAEAEAREKETRALS----LARALEEALEAKEELERTNK 660
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1068 ELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEkesllsqhLEMESKILLVQQDRE 1147
Cdd:pfam01576 661 QLRAEMEDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQLEELEDELQATEDAKLR--------LEVNMQALKAQFERD 732
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1148 eLWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLlkitqenDALRSSESTLLQQLKELQ 1227
Cdd:pfam01576 733 -LQARDEQGEEKRRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQI-------DAANKGREEAVKQLKKLQ 804
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1228 ANKDAVDVACQKHIKEREELEHYQKlleENDRVIKDKDDVIQRLQssyDDLARNQRELLQevsiLTAERDSAQEKDLDLK 1307
Cdd:pfam01576 805 AQMKDLQRELEEARASRDEILAQSK---ESEKKLKNLEAELLQLQ---EDLAASERARRQ----AQQERDELADEIASGA 874
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1308 STHIALKNEidcllqtNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASL 1387
Cdd:pfam01576 875 SGKSALQDE-------KRRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQN 947
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1388 SSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEkltkatadavlaetafTEKinelnleke 1467
Cdd:pfam01576 948 KELKAKLQEMEGTVKSKFKSSIAALEAKIAQLEEQLEQESRERQAANKLVRR----------------TEK--------- 1002
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1468 svfskslqfeKHNEALLREKDEleRKYSEllDEKKSLENAFSDMKReqeldfsakrllvqenttLKYSIEALEEELKKkn 1547
Cdd:pfam01576 1003 ----------KLKEVLLQVEDE--RRHAD--QYKDQAEKGNSRMKQ------------------LKRQLEEAEEEASR-- 1048
|
1210 1220 1230 1240 1250
....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1548 lenqeliacrsdlsdllkeAQDARRTLENELAAVSHAKQVLSSSFNTCSS 1597
Cdd:pfam01576 1049 -------------------ANAARRKLQRELDDATESNESMNREVSTLKS 1079
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
565-721 |
8.91e-05 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 47.71 E-value: 8.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 565 KEHQREMSSLKEKFE---SSEEALRKEIKTLSASNERM---GKENESLKTKLDHANKENSDVIELWK------SKLESAI 632
Cdd:pfam05667 331 QQREEELEELQEQLEdleSSIQELEKEIKKLESSIKQVeeeLEELKEQNEELEKQYKVKKKTLDLLPdaeeniAKLQALV 410
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 633 ASHQQAMEELKVSFNKGVGAQTAEFAELKTQmekvkldyenemsnlKLKQENEKSQHLKEIEALKAKLLEVTEE---KEQ 709
Cdd:pfam05667 411 DASAQRLVELAGQWEKHRVPLIEEYRALKEA---------------KSNKEDESQRKLEEIKELREKIKEVAEEakqKEE 475
|
170
....*....|..
gi 2024359610 710 TLENLKAKLESV 721
Cdd:pfam05667 476 LYKQLVAEYERL 487
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
749-1121 |
8.99e-05 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 47.87 E-value: 8.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 749 LQAKCNEQTKLIGSlTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETekvggsskvSNLTKELQG 828
Cdd:PRK10246 225 LQVLTDEEKQLLTA-QQQQQQSLNWLTRLDELQQEASRRQQALQQALAAEEKAQPQLAALSL---------AQPARQLRP 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 829 KEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQ---KEEQFALMSSELEQLKSNLTV 905
Cdd:PRK10246 295 HWERIQEQSAALAHTRQQIEEVNTRLQSTMALRARIRHHAAKQSAELQAQQQSLNTwlaEHDRFRQWNNELAGWRAQFSQ 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 906 METKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMkmndELRLKERQLEQiqlELTKANEKAVQLQKNVEQTaq 985
Cdd:PRK10246 375 QTSDREQLRQWQQQLTHAEQKLNALPAITLTLTADEVAAAL----AQHAEQRPLRQ---RLVALHGQIVPQQKRLAQL-- 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 986 kaeqsqQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKEtsEMItkhdADIKGFKQNL------------- 1052
Cdd:PRK10246 446 ------QVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQE--ARI----KDLEAQRAQLqagqpcplcgsts 513
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024359610 1053 ---LDAEEALK--AAQKKNDELEtqaEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTL 1121
Cdd:PRK10246 514 hpaVEAYQALEpgVNQSRLDALE---KEVKKLGEEGAALRGQLDALTKQLQRDESEAQSLRQEEQALTQQWQAV 584
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
706-1301 |
9.08e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.99 E-value: 9.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 706 EKEQTLENLKAKLESVEDqhLVEMEDTLNKLQEaeiKVKELDVLQAKCNEQTKLIGSLTQQIRasEEKLLDLAALQKANS 785
Cdd:COG4913 219 EEPDTFEAADALVEHFDD--LERAHEALEDARE---QIELLEPIRELAERYAAARERLAELEY--LRAALRLWFAQRRLE 291
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 786 EGKLEIQKLSEQLQAAEKQIQNLETEKVG---------------GSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSL 850
Cdd:COG4913 292 LLEAELEELRAELARLEAELERLEARLDAlreeldeleaqirgnGGDRLEQLEREIERLERELEERERRRARLEALLAAL 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 851 -------EKELQLLKEKFTSAVDGAENAQRAMQ----ETINKLNQKEEQFALMSSELEQL---KSNLTVMETKLKEREER 916
Cdd:COG4913 372 glplpasAEEFAALRAEAAALLEALEEELEALEealaEAEAALRDLRRELRELEAEIASLerrKSNIPARLLALRDALAE 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 917 EQQLTEAKVKLendIAEIMKSSGDSS------------------------AQLMKMNDELRLKERqleqIQLELTKANEK 972
Cdd:COG4913 452 ALGLDEAELPF---VGELIEVRPEEErwrgaiervlggfaltllvppehyAAALRWVNRLHLRGR----LVYERVRTGLP 524
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 973 AVQLQKNVEQT-AQKAEqsqqetLKTH------QEELKKM--------QDQLTDMKKQMeTSQNQYKDLQAKYEKETSEM 1037
Cdd:COG4913 525 DPERPRLDPDSlAGKLD------FKPHpfrawlEAELGRRfdyvcvdsPEELRRHPRAI-TRAGQVKGNGTRHEKDDRRR 597
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1038 ITKH-------DADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSV------LASARKEIELMSDKM 1104
Cdd:COG4913 598 IRSRyvlgfdnRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYswdeidVASAEREIAELEAEL 677
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1105 RDLISEKETLAQerntLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTekvAL 1184
Cdd:COG4913 678 ERLDASSDDLAA----LEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELR---AL 750
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1185 ISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQL-KELQANKDAVDVACQKHIKEREELEHYQKLLE--ENDRVI 1261
Cdd:COG4913 751 LEERFAAALGDAVERELRENLEERIDALRARLNRAEEELeRAMRAFNREWPAETADLDADLESLPEYLALLDrlEEDGLP 830
|
650 660 670 680
....*....|....*....|....*....|....*....|
gi 2024359610 1262 KDKDDVIQRLQSSyddlarNQRELLQEVSILTAERDSAQE 1301
Cdd:COG4913 831 EYEERFKELLNEN------SIEFVADLLSKLRRAIREIKE 864
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
652-890 |
9.32e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 9.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 652 AQTAEFAELKTQMEKVKldyenemsnlklKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQhLVEMED 731
Cdd:COG4942 17 AQADAAAEAEAELEQLQ------------QEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQE-LAALEA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 732 TLNKLQeaeikvKELDVLQAKCNEQTKLIGSLTQQI----RASEEKLL-----------DLAALQKANSEGKLEIQKLSE 796
Cdd:COG4942 84 ELAELE------KEIAELRAELEAQKEELAELLRALyrlgRQPPLALLlspedfldavrRLQYLKYLAPARREQAEELRA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 797 QLQAAEKQIQNLETEKvggsskvSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEkftsAVDGAENAQRAMQ 876
Cdd:COG4942 158 DLAELAALRAELEAER-------AELEALLAELEEERAALEALKAERQKLLARLEKELAELAA----ELAELQQEAEELE 226
|
250
....*....|....
gi 2024359610 877 ETINKLNQKEEQFA 890
Cdd:COG4942 227 ALIARLEAEAAAAA 240
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1054-1414 |
9.68e-05 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 47.20 E-value: 9.68e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1054 DAEEALKAAQKKNDELETQAEELKKQAEQAKSlssVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHL 1133
Cdd:pfam07888 56 QREKEKERYKRDREQWERQRRELESRVAELKE---ELRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAAHEARIR 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1134 EMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALR 1213
Cdd:pfam07888 133 ELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQ 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1214 SSESTLLQQLKELQANKDAVDVACqkhikerEELEHYQKLLEENDRVIKDKDDVIQRLQSSYDdlaRNQRELLQevsilt 1293
Cdd:pfam07888 213 DTITTLTQKLTTAHRKEAENEALL-------EELRSLQERLNASERKVEGLGEELSSMAAQRD---RTQAELHQ------ 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1294 aERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQS----EKEMLLKSREELcvslantanenqalkLRKDEMQTELETE 1369
Cdd:pfam07888 277 -ARLQAAQLTLQLADASLALREGRARWAQERETLQQsaeaDKDRIEKLSAEL---------------QRLEERLQEERME 340
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 2024359610 1370 REKLE-KMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQE 1414
Cdd:pfam07888 341 REKLEvELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAE 386
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
786-1179 |
1.00e-04 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 47.64 E-value: 1.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 786 EGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKE--QKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTS 863
Cdd:COG5185 189 LKGISELKKAEPSGTVNSIKESETGNLGSESTLLEKAKEIINIEEalKGFQDPESELEDLAQTSDKLEKLVEQNTDLRLE 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 864 AVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETK------LKEREEREQQLTEAKVKLENDIAEIMKS 937
Cdd:COG5185 269 KLGENAESSKRLNENANNLIKQFENTKEKIAEYTKSIDIKKATESLeeqlaaAEAEQELEESKRETETGIQNLTAEIEQG 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 938 SGDSSAQLMKMNDE---------LRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQ 1008
Cdd:COG5185 349 QESLTENLEAIKEEienivgeveLSKSSEELDSFKDTIESTKESLDEIPQNQRGYAQEILATLEDTLKAADRQIEELQRQ 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1009 LTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKgfkqnlldaeealKAAQKKNDELETQAEELKKQAEQAKS-LS 1087
Cdd:COG5185 429 IEQATSSNEEVSKLLNELISELNKVMREADEESQSRLE-------------EAYDEINRSVRSKKEDLNEELTQIESrVS 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1088 SVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQK 1167
Cdd:COG5185 496 TLKATLEKLRAKLERQLEGVRSKLDQVAESLKDFMRARGYAHILALENLIPASELIQASNAKTDGQAANLRTAVIDELTQ 575
|
410
....*....|..
gi 2024359610 1168 EAAEAKSRQEST 1179
Cdd:COG5185 576 YLSTIESQQARE 587
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
354-1462 |
1.15e-04 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 47.74 E-value: 1.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 354 LQEALKEKQQHIEQLLAERDLERAEVAKATSHV-GEIEQELALVRDGhdrhvlEMEAKMDQLRAMVEAADREKVEllnql 432
Cdd:TIGR01612 625 LKKIIENNNAYIDELAKISPYQVPEHLKNKDKIySTIKSELSKIYED------DIDALYNELSSIVKENAIDNTE----- 693
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 433 eeEKRKVEDLQFRVEEESITKGDLErkrqiSEDPENTQTKLEHARIKELEQSLLFEKTKADKLQRELEDTrVATVSEKsr 512
Cdd:TIGR01612 694 --DKAKLDDLKSKIDKEYDKIQNME-----TATVELHLSNIENKKNELLDIIVEIKKHIHGEINKDLNKI-LEDFKNK-- 763
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 513 imelERDLALRVKEVAELRGRLESSK-HIDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKT 591
Cdd:TIGR01612 764 ----EKELSNKINDYAKEKDELNKYKsKISEIKNHYNDQINIDNIKDEDAKQNYDKSKEYIKTISIKEDEIFKIINEMKF 839
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 592 LsaSNERMGKENESLKTKLDHANKENSDVIELWK--SKLESAIASHQQAMEELKVSFNKGVgaqtaeFAELKTQMEKvkl 669
Cdd:TIGR01612 840 M--KDDFLNKVDKFINFENNCKEKIDSEHEQFAEltNKIKAEISDDKLNDYEKKFNDSKSL------INEINKSIEE--- 908
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 670 DYENEMSNLKLKQENEKSQHLKE-IEALKAKLLEVTEEKEQTLENLKaKLESVEDQHLVEMEDTL-NKLQEAEIKVKELD 747
Cdd:TIGR01612 909 EYQNINTLKKVDEYIKICENTKEsIEKFHNKQNILKEILNKNIDTIK-ESNLIEKSYKDKFDNTLiDKINELDKAFKDAS 987
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 748 V--LQAKCNEQTKLIGSLTQQIRASEEKLldlaaLQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKE 825
Cdd:TIGR01612 988 LndYEAKNNELIKYFNDLKANLGKNKENM-----LYHQFDEKEKATNDIEQKIEDANKNIPNIEIAIHTSIYNIIDEIEK 1062
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 826 LQGKEQKLLD------LEKNLSAVNQVKDSLE--KELQLLKE---KFTSAV----DGAENAQRAMQETINKL----NQKE 886
Cdd:TIGR01612 1063 EIGKNIELLNkeileeAEINITNFNEIKEKLKhyNFDDFGKEeniKYADEInkikDDIKNLDQKIDHHIKALeeikKKSE 1142
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 887 EQFALMSSELEQLK--SNLTVMETKLKEREEREQQLT----------EAKVKLENDIAEIMKSSGD-SSAQLMKMNDELR 953
Cdd:TIGR01612 1143 NYIDEIKAQINDLEdvADKAISNDDPEEIEKKIENIVtkidkkkniyDEIKKLLNEIAEIEKDKTSlEEVKGINLSYGKN 1222
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 954 LKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQqetlkthqeELKKMQDQLTDMKKQMET---SQNQYKD---LQ 1027
Cdd:TIGR01612 1223 LGKLFLEKIDEEKKKSEHMIKAMEAYIEDLDEIKEKSP---------EIENEMGIEMDIKAEMETfniSHDDDKDhhiIS 1293
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1028 AKYEKETSEMITKHDADIKGF--KQNLLDAEEALKA----AQKKNDELETQAEELKK-----QAEQAKSLSSVLASARKE 1096
Cdd:TIGR01612 1294 KKHDENISDIREKSLKIIEDFseESDINDIKKELQKnlldAQKHNSDINLYLNEIANiynilKLNKIKKIIDEVKEYTKE 1373
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1097 IELMSDKMRDLISEKETLAQerntlKLEKESLLSqhlEMESKI--LLVQQDREELWTKNEELNSEnkkILKQKEAAEA-- 1172
Cdd:TIGR01612 1374 IEENNKNIKDELDKSEKLIK-----KIKDDINLE---ECKSKIesTLDDKDIDECIKKIKELKNH---ILSEESNIDTyf 1442
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1173 KSRQESTEKVALisekskLLSEIETAQAD---LLKITQENdalrsSESTLLQQLKELQANKDavdvacqKHIKEREELEH 1249
Cdd:TIGR01612 1443 KNADENNENVLL------LFKNIEMADNKsqhILKIKKDN-----ATNDHDFNINELKEHID-------KSKGCKDEADK 1504
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1250 YQKLLEENDRVIKD-KDDVIQRLQSSYDDLARNQrellqevsILTAERDSAQEKDlDLKSthiaLKNEIdcLLQTNRSLQ 1328
Cdd:TIGR01612 1505 NAKAIEKNKELFEQyKKDVTELLNKYSALAIKNK--------FAKTKKDSEIIIK-EIKD----AHKKF--ILEAEKSEQ 1569
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1329 SEKEMllkSREELCVSlANTANENQALKLRKDeMQTELETEREKLEKMT----------KDNMDLKASLSSLSNFLEEMK 1398
Cdd:TIGR01612 1570 KIKEI---KKEKFRIE-DDAAKNDKSNKAAID-IQLSLENFENKFLKISdikkkindclKETESIEKKISSFSIDSQDTE 1644
|
1130 1140 1150 1160 1170 1180
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024359610 1399 SSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINEL 1462
Cdd:TIGR01612 1645 LKENGDNLNSLQEFLESLKDQKKNIEDKKKELDELDSEIEKIEIDVDQHKKNYEIGIIEKIKEI 1708
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1536-2065 |
1.27e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 47.20 E-value: 1.27e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1536 IEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQK 1615
Cdd:PRK01156 185 IDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAESD 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1616 LTGEVENMKENLTVEKkarildkesfllERMELQNNigflekEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKM 1695
Cdd:PRK01156 265 LSMELEKNNYYKELEE------------RHMKIIND------PVYKNRNYINDYFKYKNDIENKKQILSNIDAEINKYHA 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1696 ILYK--ETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINEE 1773
Cdd:PRK01156 327 IIKKlsVLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDA 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1774 ILKEKEKLSKEYYKLHEKVVALLEQTDADFSCRLLVSEGKHEL------------LLEEMSNLALKL--REIERLQAQTF 1839
Cdd:PRK01156 407 IKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLngqsvcpvcgttLGEEKSNHIINHynEKKSRLEEKIR 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1840 MQKFEADKRAEEVLQtmekVTKEKDAIHQEKIETLAS----LENSRQTNEKLQNELDMLKQNNLKNEE--ELTKSKELLN 1913
Cdd:PRK01156 487 EIEIEVKDIDEKIVD----LKKRKEYLESEEINKSINeynkIESARADLEDIKIKINELKDKHDKYEEikNRYKSLKLED 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1914 LENKKVEELKK-------EFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSH-QKLEEERSVLNNQ---LLEMK 1982
Cdd:PRK01156 563 LDSKRTSWLNAlavisliDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSiREIENEANNLNNKyneIQENK 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1983 KRESTLKKEIDE------ERASLQKSISDTSALITQKDEELEKLRNEitvLRGENASAKTLQSVVKTLESDKLKLEEKVK 2056
Cdd:PRK01156 643 ILIEKLRGKIDNykkqiaEIDSIIPDLKEITSRINDIEDNLKKSRKA---LDDAKANRARLESTIEILRTRINELSDRIN 719
|
....*....
gi 2024359610 2057 NLEQKLKAK 2065
Cdd:PRK01156 720 DINETLESM 728
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
907-1098 |
1.28e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 46.75 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 907 ETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQK 986
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 987 AEQSQQ--------------ETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMitkhdadikgfKQNL 1052
Cdd:COG3883 95 LYRSGGsvsyldvllgsesfSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAEL-----------EALK 163
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 2024359610 1053 LDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIE 1098
Cdd:COG3883 164 AELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAE 209
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1062-1920 |
1.30e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.44 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1062 AQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKIll 1141
Cdd:PTZ00121 1083 AKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKA-- 1160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1142 vqqdreelwtkneelnSENKKILKQKEAAEAKSRQESTEkvaliSEKSKLLSEIETAQadllKITQENDALRSSESTLLQ 1221
Cdd:PTZ00121 1161 ----------------EDARKAEEARKAEDAKKAEAARK-----AEEVRKAEELRKAE----DARKAEAARKAEEERKAE 1215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1222 QLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQE 1301
Cdd:PTZ00121 1216 EARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEA 1295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1302 KDLDLKSTHIALKNEIDCLLQTNRsLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNM 1381
Cdd:PTZ00121 1296 KKAEEKKKADEAKKKAEEAKKADE-AKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKE 1374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1382 DLKASLSSLSNFLEEMKSSREASN--SEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAftEKI 1459
Cdd:PTZ00121 1375 EAKKKADAAKKKAEEKKKADEAKKkaEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEA--KKK 1452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1460 NELNLEKESVFSKSLQFEKHNEAllREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEAL 1539
Cdd:PTZ00121 1453 AEEAKKAEEAKKKAEEAKKADEA--KKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKA 1530
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1540 EEELKKKNLENQEliacRSDLSDLLKEAQDARRTLENELAavsHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGE 1619
Cdd:PTZ00121 1531 EEAKKADEAKKAE----EKKKADELKKAEELKKAEEKKKA---EEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEE 1603
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1620 VENMK-ENLTVEKKARIldKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILY 1698
Cdd:PTZ00121 1604 EKKMKaEEAKKAEEAKI--KAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAK 1681
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1699 KETEQLASKIEQLKSDFTSL----SVSKAELEDVHSCVSVMLDELQHKYEVTE--KEKMELVQENESLHAEWKSLVIInE 1772
Cdd:PTZ00121 1682 KAEEDEKKAAEALKKEAEEAkkaeELKKKEAEEKKKAEELKKAEEENKIKAEEakKEAEEDKKKAEEAKKDEEEKKKI-A 1760
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1773 EILKEKEKLSKEYYKLHEKVVAllEQTDADFSCRLLVSEGKHElllEEMSNLALKLREIERLQAQTFMQKFEADKRAEEV 1852
Cdd:PTZ00121 1761 HLKKEEEKKAEEIRKEKEAVIE--EELDEEDEKRRMEVDKKIK---DIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEV 1835
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359610 1853 LQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQnnlkNEEELTKSKELLNLENKKVE 1920
Cdd:PTZ00121 1836 ADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKED----DEEEIEEADEIEKIDKDDIE 1899
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1818-2029 |
1.31e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.22 E-value: 1.31e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1818 LEEMSNLALKLRE-IERLQaqtfmqkfeadkRAEEVLQTMEKVTKEKDaiHQEKIETLASLENSRQTNEKLQNELDmlkq 1896
Cdd:COG4913 237 LERAHEALEDAREqIELLE------------PIRELAERYAAARERLA--ELEYLRAALRLWFAQRRLELLEAELE---- 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1897 nnlKNEEELTKSKELLNLENKKVEELKKEFEALKLA-AAQKSQQLAALQEENVKLAEELGRSRDEVTSHQK----LEEER 1971
Cdd:COG4913 299 ---ELRAELARLEAELERLEARLDALREELDELEAQiRGNGGDRLEQLEREIERLERELEERERRRARLEAllaaLGLPL 375
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359610 1972 SVLNNQLLEMKKRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRG 2029
Cdd:COG4913 376 PASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLER 433
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
772-1077 |
1.32e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 46.93 E-value: 1.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 772 EKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETekvggsskvsnltkelQGKEQKllDLEKNLSAVNQVkdsle 851
Cdd:PHA02562 157 EDLLDISVLSEMDKLNKDKIRELNQQIQTLDMKIDHIQQ----------------QIKTYN--KNIEEQRKKNGE----- 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 852 kELQLLKEKFTSAVDGAENAqramqetinklnqkeeqfalmSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDI 931
Cdd:PHA02562 214 -NIARKQNKYDELVEEAKTI---------------------KAEIEELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKI 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 932 AEIMKssgdssaqLMKM---NDELRLKERQLEQIQLELTKANEKAVQLQKNVEQ--TAQKAEQSQQETLKTHQEELKKMQ 1006
Cdd:PHA02562 272 EQFQK--------VIKMyekGGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKldTAIDELEEIMDEFNEQSKKLLELK 343
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024359610 1007 DQLTDMKKQMETSQNQYKDLQAKYEKETSEMITkHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELK 1077
Cdd:PHA02562 344 NKISTNKQSLITLVDKAKKVKAAIEELQAEFVD-NAEELAKLQDELDKIVKTKSELVKEKYHRGIVTDLLK 413
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
898-1568 |
1.45e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 47.02 E-value: 1.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 898 QLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAE---IMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAV 974
Cdd:pfam05483 107 KLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQEnkdLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYM 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 975 QLQKNVEQTAQKAEQSQQETLKTHQEelkkMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLD 1054
Cdd:pfam05483 187 DLNNNIEKMILAFEELRVQAENARLE----MHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFL 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1055 AEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLE 1134
Cdd:pfam05483 263 LEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNK 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1135 MESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRS 1214
Cdd:pfam05483 343 AKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLD 422
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1215 SESTLLQQLKELQANKDAVDVACQKHIKEREELE-----------HYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQR 1283
Cdd:pfam05483 423 EKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEiqltaiktseeHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENK 502
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1284 ELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSE----KEMLLKSREELCVSLANTANENQALKLRK 1359
Cdd:pfam05483 503 ELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDElesvREEFIQKGDEVKCKLDKSEENARSIEYEV 582
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1360 DEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSE------KIHLLQEALFASEQRLlaerEELVNE 1433
Cdd:pfam05483 583 LKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQlnayeiKVNKLELELASAKQKF----EEIIDN 658
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1434 NKAVTEkLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDelERKYSELLDEKKSLENAFSDMKR 1513
Cdd:pfam05483 659 YQKEIE-DKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVALMEKH--KHQYDKIIEERDSELGLYKNKEQ 735
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 2024359610 1514 EQEldfSAKRLLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQ 1568
Cdd:pfam05483 736 EQS---SAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKENTAILKDKK 787
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
865-1228 |
1.53e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 47.25 E-value: 1.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 865 VDGAENAQRAMQETINKLNQKEEQFALMSSELEQLksnltvmetklkerEEREQQLTEakvklENDIAeimkssgdsSAQ 944
Cdd:COG3096 284 SERALELRRELFGARRQLAEEQYRLVEMARELEEL--------------SARESDLEQ-----DYQAA---------SDH 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 945 LMKMNDELRLKERqLEQIQLELTKANEKAVQLQKNVEQtAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQN--- 1021
Cdd:COG3096 336 LNLVQTALRQQEK-IERYQEDLEELTERLEEQEEVVEE-AAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTrai 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1022 QYKD-LQAKYEKE--------TSEMITKHDADIK-----------GFKQNLLDA-------EEALKAAQKKNDELET--- 1071
Cdd:COG3096 414 QYQQaVQALEKARalcglpdlTPENAEDYLAAFRakeqqateevlELEQKLSVAdaarrqfEKAYELVCKIAGEVERsqa 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1072 ---------QAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDL----------ISEKETLAQERNTLKLEKESLLSQH 1132
Cdd:COG3096 494 wqtarellrRYRSQQALAQRLQQLRAQLAELEQRLRQQQNAERLLeefcqrigqqLDAAEELEELLAELEAQLEELEEQA 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1133 LEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEaKSRQESTEKVAlisEKSKLLSEIETAQADLLKITQENDAL 1212
Cdd:COG3096 574 AEAVEQRSELRQQLEQLRARIKELAARAPAWLAAQDALE-RLREQSGEALA---DSQEVTAAMQQLLEREREATVERDEL 649
|
410
....*....|....*.
gi 2024359610 1213 RSSESTLLQQLKELQA 1228
Cdd:COG3096 650 AARKQALESQIERLSQ 665
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
790-1094 |
1.53e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 47.25 E-value: 1.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 790 EIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGkeqklldLEKNLSAVNQVKD-SLEKELQLLKEKftsaVDGA 868
Cdd:COG3096 837 ELAALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQL-------LNKLLPQANLLADeTLADRLEELREE----LDAA 905
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 869 ENAQRAMQETINKLNQKEEQFALMSSELEQLKsNLTVMETKLKEREEREQQLTEAkvklendIAEIMK-----SSGDSSA 943
Cdd:COG3096 906 QEAQAFIQQHGKALAQLEPLVAVLQSDPEQFE-QLQADYLQAKEQQRRLKQQIFA-------LSEVVQrrphfSYEDAVG 977
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 944 QLMK---MNDELRlkeRQLEQIQLELTKANEKAVQLQKNVEQtAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQ 1020
Cdd:COG3096 978 LLGEnsdLNEKLR---ARLEQAEEARREAREQLRQAQAQYSQ-YNQVLASLKSSRDAKQQTLQELEQELEELGVQADAEA 1053
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359610 1021 NQykdlQAKYEK-ETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAK-SLSSVLASAR 1094
Cdd:COG3096 1054 EE----RARIRRdELHEELSQNRSRRSQLEKQLTRCEAEMDSLQKRLRKAERDYKQEREQVVQAKaGWCAVLRLAR 1125
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1693-2075 |
1.61e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 47.04 E-value: 1.61e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1693 EKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDvhSCVSVMLDELQHKYEVTEKEKMELVQ--ENESLHAEwkslvii 1770
Cdd:pfam17380 234 EKMERRKESFNLAEDVTTMTPEYTVRYNGQTMTEN--EFLNQLLHIVQHQKAVSERQQQEKFEkmEQERLRQE------- 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1771 NEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSCRLLVSEGKHELlleEMSNLALKLREIERLQAQTFMQKFEADKRAE 1850
Cdd:pfam17380 305 KEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMEREREL---ERIRQEERKRELERIRQEEIAMEISRMRELE 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1851 ----EVLQTMEKVTKEKDAIHQEKIetlasLENSRQTNEKLQneldMLKQNNLKNEEELTKSKELLNLEnkkvEELKKEF 1926
Cdd:pfam17380 382 rlqmERQQKNERVRQELEAARKVKI-----LEEERQRKIQQQ----KVEMEQIRAEQEEARQREVRRLE----EERAREM 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1927 EALKLAAAQKSQQLAAL-QEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQL-------LEMKKRESTLKKEIDEERAS 1998
Cdd:pfam17380 449 ERVRLEEQERQQQVERLrQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELeerkqamIEEERKRKLLEKEMEERQKA 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1999 L----QKSISDTSALITQKDEELEKLRNEITVLRGEnasaktlQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTS 2074
Cdd:pfam17380 529 IyeeeRRREAEEERRKQQEMEERRRIQEQMRKATEE-------RSRLEAMEREREMMRQIVESEKARAEYEATTPITTIK 601
|
.
gi 2024359610 2075 P 2075
Cdd:pfam17380 602 P 602
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1829-2064 |
1.76e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 47.06 E-value: 1.76e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1829 REIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKS 1908
Cdd:PTZ00121 1278 RKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAAD 1357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1909 KELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESTL 1988
Cdd:PTZ00121 1358 EAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAK 1437
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359610 1989 KKEIDEERASLQKSISDTSalitQKDEELEKLRNE---ITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQKLKA 2064
Cdd:PTZ00121 1438 KKAEEAKKADEAKKKAEEA----KKAEEAKKKAEEakkADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKA 1512
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1142-1572 |
1.84e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.68 E-value: 1.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1142 VQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSES--TL 1219
Cdd:COG4717 51 LEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQllPL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1220 LQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQ-RELLQEVSILTAERDS 1298
Cdd:COG4717 131 YQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEElQDLAEELEELQQRLAE 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1299 AQEKDLDLKSTHIALKNEIDCLLQTNRSLQ-----SEKEMLLKSREELCV--------------------------SLAN 1347
Cdd:COG4717 211 LEEELEEAQEELEELEEELEQLENELEAAAleerlKEARLLLLIAAALLAllglggsllsliltiagvlflvlgllALLF 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1348 TANENQALKLRKDEMQTELETEREKLEK------MTKDNMDLKASLSSLSNFLEEMKSSREAsNSEKIHLLQEALfasEQ 1421
Cdd:COG4717 291 LLLAREKASLGKEAEELQALPALEELEEeeleelLAALGLPPDLSPEELLELLDRIEELQEL-LREAEELEEELQ---LE 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1422 RLLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQF-EKHNEALLREK--------DELER 1492
Cdd:COG4717 367 ELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELlEALDEEELEEEleeleeelEELEE 446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1493 KYSELLDEKKSLENAFSDMKREQELDfsakrllvqentTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARR 1572
Cdd:COG4717 447 ELEELREELAELEAELEQLEEDGELA------------ELLQELEELKAELRELAEEWAALKLALELLEEAREEYREERL 514
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1154-1430 |
2.07e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 46.82 E-value: 2.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1154 EELNSENKKILKQKEAAEAKSRQESTEKVALI--SEKSKLLSEIETAQA--DLLKITQENDALRSSESTLLQQLKELQAN 1229
Cdd:PLN02939 106 EAIAAIDNEQQTNSKDGEQLSDFQLEDLVGMIqnAEKNILLLNQARLQAleDLEKILTEKEALQGKINILEMRLSETDAR 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1230 kdaVDVACQKHIKEREELEHYQKLLEEndrvikdkddVIQRLQSSYddlarnqrellQEVSILTAERDSAQEKDLDLKST 1309
Cdd:PLN02939 186 ---IKLAAQEKIHVEILEEQLEKLRNE----------LLIRGATEG-----------LCVHSLSKELDVLKEENMLLKDD 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1310 HIALKNEIDCLLQTNRS---LQSEKEMLLKSREEL-CVSLANTANENQALKLRKDEMQTELETEREKLEKMTK------- 1378
Cdd:PLN02939 242 IQFLKAELIEVAETEERvfkLEKERSLLDASLRELeSKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRATNqvekaal 321
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 2024359610 1379 ---DNMDLKASLSSLSNFLEEMKSSREASnsEKIHLLQEALFASEQRLLAEREEL 1430
Cdd:PLN02939 322 vldQNQDLRDKVDKLEASLKEANVSKFSS--YKVELLQQKLKLLEERLQASDHEI 374
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
411-936 |
2.32e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 46.43 E-value: 2.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 411 MDQLRAMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEDPENTQTKLEHArIKELEQSLlfeKT 490
Cdd:PRK01156 185 IDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDM-KNRYESEI---KT 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 491 KADKLQRELEDTRVATVSEKsRIMELERDLAL----RVKEVAELRGRLESSKHI-----------DDVDTSLSLLQEISS 555
Cdd:PRK01156 261 AESDLSMELEKNNYYKELEE-RHMKIINDPVYknrnYINDYFKYKNDIENKKQIlsnidaeinkyHAIIKKLSVLQKDYN 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 556 LQEKMAAAGKEHQREMSSLKEkFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELWKSKLESaIASH 635
Cdd:PRK01156 340 DYIKKKSRYDDLNNQILELEG-YEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNE-INVK 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 636 QQAMEELKVSFNKGVGAQTAEFAELKTQME---------------------KVKLDYENEMSNLKLK---QENEKSQHLK 691
Cdd:PRK01156 418 LQDISSKVSSLNQRIRALRENLDELSRNMEmlngqsvcpvcgttlgeeksnHIINHYNEKKSRLEEKireIEIEVKDIDE 497
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 692 EIEALKAKLLEVTEEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQEAEIKVKELDVlQAKCNEQTKLIGSLTQQIRA-S 770
Cdd:PRK01156 498 KIVDLKKRKEYLESEEINKSINEYNKIESARAD-LEDIKIKINELKDKHDKYEEIKN-RYKSLKLEDLDSKRTSWLNAlA 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 771 EEKLLDLAALQKANSEgkleiqkLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQgKEQKLLDLEKNLSavnQVKDSL 850
Cdd:PRK01156 576 VISLIDIETNRSRSNE-------IKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIE-NEANNLNNKYNEI---QENKIL 644
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 851 EKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLEND 930
Cdd:PRK01156 645 IEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINET 724
|
....*.
gi 2024359610 931 IAEIMK 936
Cdd:PRK01156 725 LESMKK 730
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1001-1236 |
2.49e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.98 E-value: 2.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1001 ELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEmitkhdadikgfkqnLLDAEEALKAAQKKNDELETQAEELKKQA 1080
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEE---------------YNELQAELEALQAEIDKLQAEIAEAEAEI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1081 EQAKS-LSSVLASARK--------EIELMSDKMRDLISEKETLAQerntlklekesllsqhlemeskilLVQQDREELwt 1151
Cdd:COG3883 82 EERREeLGERARALYRsggsvsylDVLLGSESFSDFLDRLSALSK------------------------IADADADLL-- 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1152 knEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKD 1231
Cdd:COG3883 136 --EELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAA 213
|
....*
gi 2024359610 1232 AVDVA 1236
Cdd:COG3883 214 AAAAA 218
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
337-595 |
3.45e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.06 E-value: 3.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 337 LTETSSRYARKISGTTALQEALKEKQQHIEQLlAERDLERAEVAKATSHVGEIEQELALVRDGHDRhVLEMEAKMDQLRA 416
Cdd:COG4913 622 LEEELAEAEERLEALEAELDALQERREALQRL-AEYSWDEIDVASAEREIAELEAELERLDASSDD-LAALEEQLEELEA 699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 417 MVEAADREKVELLNQLEEEKRKVEDLQfrveeesitkGDLERKRQISEDPENTQTKLEHARIKELEQSLLFEKtKADKLQ 496
Cdd:COG4913 700 ELEELEEELDELKGEIGRLEKELEQAE----------EELDELQDRLEAAEDLARLELRALLEERFAAALGDA-VERELR 768
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 497 RELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRlESSKHIDDVDTSLSLLQEISS-----LQEKMAAAGKEH-QRE 570
Cdd:COG4913 769 ENLEERIDALRARLNRAEEELERAMRAFNREWPAETA-DLDADLESLPEYLALLDRLEEdglpeYEERFKELLNENsIEF 847
|
250 260
....*....|....*....|....*
gi 2024359610 571 MSSLKEKFESSEEALRKEIKTLSAS 595
Cdd:COG4913 848 VADLLSKLRRAIREIKERIDPLNDS 872
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
655-1173 |
3.75e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.68 E-value: 3.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 655 AEFAELKTQMEKVKlDYENEMSNLKLKQEneksqHLKEIEALKAKLLEVTEEKEQtLENLKAKLESVEDQhlvemedtln 734
Cdd:COG4913 225 EAADALVEHFDDLE-RAHEALEDAREQIE-----LLEPIRELAERYAAARERLAE-LEYLRAALRLWFAQ---------- 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 735 klQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAAlQKANSEGkleiqklsEQLQAAEKQIQNLETEKVG 814
Cdd:COG4913 288 --RRLELLEAELEELRAELARLEAELERLEARLDALREELDELEA-QIRGNGG--------DRLEQLEREIERLERELEE 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 815 GSSKVSNLTKELQGKEQKLL----DLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFA 890
Cdd:COG4913 357 RERRRARLEALLAALGLPLPasaeEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKS 436
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 891 LMSSELEQ----LKSNLTVMETKLK-------------------ER------------EEREQQLTEA------------ 923
Cdd:COG4913 437 NIPARLLAlrdaLAEALGLDEAELPfvgelievrpeeerwrgaiERvlggfaltllvpPEHYAAALRWvnrlhlrgrlvy 516
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 924 -KVKLENDIAEIMKSSGDSSAQLMK---------MNDELRLK--------ERQLEQ----IQLE-LTKANEKAVQLQKnv 980
Cdd:COG4913 517 eRVRTGLPDPERPRLDPDSLAGKLDfkphpfrawLEAELGRRfdyvcvdsPEELRRhpraITRAgQVKGNGTRHEKDD-- 594
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 981 eQTAQKAE----QSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKyeKETSEMITKH---DADIKGFKQNLL 1053
Cdd:COG4913 595 -RRRIRSRyvlgFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQER--REALQRLAEYswdEIDVASAEREIA 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1054 DAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHL 1133
Cdd:COG4913 672 ELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALL 751
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 2024359610 1134 EMESKILLVQQDREELWtknEELNSENKKILKQKEAAEAK 1173
Cdd:COG4913 752 EERFAAALGDAVERELR---ENLEERIDALRARLNRAEEE 788
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1461-1892 |
4.10e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 45.55 E-value: 4.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1461 ELNLEKESVFSKSLQFEK-HNEALLREKDE----LERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYS 1535
Cdd:pfam01576 109 EEQLDEEEAARQKLQLEKvTTEAKIKKLEEdillLEDQNSKLSKERKLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAM 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1536 IEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQK 1615
Cdd:pfam01576 189 ISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRE 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1616 LTGEVENMKENLTVEKKARILDK-------ESFLLERMELQNNIGFL----------EKEVEEMREKNKEFLTEKELLVQ 1678
Cdd:pfam01576 269 LEAQISELQEDLESERAARNKAEkqrrdlgEELEALKTELEDTLDTTaaqqelrskrEQEVTELKKALEEETRSHEAQLQ 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1679 EKEKSET--------KLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEK 1750
Cdd:pfam01576 349 EMRQKHTqaleelteQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQR 428
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1751 MELVQENESLHAEWKSLVIINEEILKEKEKLSKEY----YKLHEKVVALLEQTDA--DFSCRLLVSEGKHELLLEEMSNL 1824
Cdd:pfam01576 429 AELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVssleSQLQDTQELLQEETRQklNLSTRLRQLEDERNSLQEQLEEE 508
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024359610 1825 ALKLREIERLQAQTFMQKFEADKRAEEVLQTME-------KVTKEKDAIHQEKIETLASLENSRQTNEKLQNELD 1892
Cdd:pfam01576 509 EEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEaleegkkRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELD 583
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
777-937 |
4.25e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 44.15 E-value: 4.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 777 LAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKD--SLEKEL 854
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEyeALQKEI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 855 QLLKEKftsavdgAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLtvmETKLKEREEREQQLTEAKVKLENDIAEI 934
Cdd:COG1579 99 ESLKRR-------ISDLEDEILELMERIEELEEELAELEAELAELEAEL---EEKKAELDEELAELEAELEELEAEREEL 168
|
...
gi 2024359610 935 MKS 937
Cdd:COG1579 169 AAK 171
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
802-1135 |
4.37e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.89 E-value: 4.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 802 EKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINK 881
Cdd:COG4372 9 GKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQ 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 882 LNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQ 961
Cdd:COG4372 89 LQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAA 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 962 IQLELTKANEKAV--QLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMIT 1039
Cdd:COG4372 169 LEQELQALSEAEAeqALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDK 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1040 KHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERN 1119
Cdd:COG4372 249 EELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKL 328
|
330
....*....|....*.
gi 2024359610 1120 TLKLEKESLLSQHLEM 1135
Cdd:COG4372 329 ELALAILLAELADLLQ 344
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1561-2068 |
4.77e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 45.48 E-value: 4.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1561 SDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKEN---LTVEKKARILD 1637
Cdd:pfam05483 281 DENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAhsfVVTEFEATTCS 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1638 KESFL-LERMELQNNIGFLEKEVEEMREKNKEfLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFT 1716
Cdd:pfam05483 361 LEELLrTEQQRLEKNEDQLKIITMELQKKSSE-LEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQ 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1717 SLS----VSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQE---NESLHAEWKSLVIINEEILKEKEKLSKEYYKLH 1789
Cdd:pfam05483 440 ELIfllqAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEklkNIELTAHCDKLLLENKELTQEASDMTLELKKHQ 519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1790 EKVVALLEQTDAdfscrllvsegkhellleemsnlalKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDaihqe 1869
Cdd:pfam05483 520 EDIINCKKQEER-------------------------MLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLD----- 569
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1870 KIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELtkskellnlENKKVEELKKEFEALKLAAAQKSQQLAALQEENVK 1949
Cdd:pfam05483 570 KSEENARSIEYEVLKKEKQMKILENKCNNLKKQIEN---------KNKNIEELHQENKALKKKGSAENKQLNAYEIKVNK 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1950 LAEELGRSRDE----VTSHQKLEEERSVLNNQLLEMKKREST-------LKKEIDEErasLQKSISDTSALITQKDEELE 2018
Cdd:pfam05483 641 LELELASAKQKfeeiIDNYQKEIEDKKISEEKLLEEVEKAKAiadeavkLQKEIDKR---CQHKIAEMVALMEKHKHQYD 717
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 2024359610 2019 KLRNEITVLRGENASAKTLQSVVK-TLESDKLKLEEKVKNLEQKLKAKSEQ 2068
Cdd:pfam05483 718 KIIEERDSELGLYKNKEQEQSSAKaALEIELSNIKAELLSLKKQLEIEKEE 768
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1849-2093 |
5.20e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 45.29 E-value: 5.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1849 AEEVLQTMEKVTKEKDAIHQEK---------IETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKskellnLENKKV 1919
Cdd:PRK11281 38 EADVQAQLDALNKQKLLEAEDKlvqqdleqtLALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEA------LKDDND 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1920 EELKKEFEALKLAAAQK--SQQLAALQEENVKLAE----------ELGRSRDEVTSHQK-LEEERSVLNNQLLEMKKRES 1986
Cdd:PRK11281 112 EETRETLSTLSLRQLESrlAQTLDQLQNAQNDLAEynsqlvslqtQPERAQAALYANSQrLQQIRNLLKGGKVGGKALRP 191
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1987 TLKKEIDEERASL-------QKSISDTSALITQKDEELEKLRNEITVLRGENAsakTLQSVVKtleSDKLKL-EEKVKNL 2058
Cdd:PRK11281 192 SQRVLLQAEQALLnaqndlqRKSLEGNTQLQDLLQKQRDYLTARIQRLEHQLQ---LLQEAIN---SKRLTLsEKTVQEA 265
|
250 260 270
....*....|....*....|....*....|....*
gi 2024359610 2059 EQKLKAKSEQpltvTSPsgdiaanLLQDESAEDKQ 2093
Cdd:PRK11281 266 QSQDEAARIQ----ANP-------LVAQELEINLQ 289
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
353-603 |
5.34e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 45.44 E-value: 5.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 353 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDR---HVLEMEAKMDQLRAMVEA-ADREKVEL 428
Cdd:TIGR02169 713 DASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKEleaRIEELEEDLHKLEEALNDlEARLSHSR 792
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 429 LNQLEEEKRKVEDLQFRVEE-----ESITKGDLERKRQISEDPENTQTKLEH--ARIKELEQSLLFEKTKADKLQRELED 501
Cdd:TIGR02169 793 IPEIQAELSKLEEEVSRIEArlreiEQKLNRLTLEKEYLEKEIQELQEQRIDlkEQIKSIEKEIENLNGKKEELEEELEE 872
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 502 TRVATVSEKSRIMELERDLALRVKEVAELRGRLESSK-HIDDVDTSLSLLQE-ISSLQEKMAAAGKEHQREMSSLKEkfE 579
Cdd:TIGR02169 873 LEAALRDLESRLGDLKKERDELEAQLRELERKIEELEaQIEKKRKRLSELKAkLEALEEELSEIEDPKGEDEEIPEE--E 950
|
250 260
....*....|....*....|....
gi 2024359610 580 SSEEALRKEIKTLSASNERMGKEN 603
Cdd:TIGR02169 951 LSLEDVQAELQRVEEEIRALEPVN 974
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
708-1076 |
5.57e-04 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 45.43 E-value: 5.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 708 EQTLENLKA-----KLESVEdqhlvEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQK 782
Cdd:PRK10929 29 TQELEQAKAaktpaQAEIVE-----ALQSALNWLEERKGSLERAKQYQQVIDNFPKLSAELRQQLNNERDEPRSVPPNMS 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 783 ANsEGKLEIQKLSEQLQAAEKQIQNlETEKVGGSSKVSNLTKELQGKEQKLL-DLEKNLSAVNQVKDSLEK-ELQLLKek 860
Cdd:PRK10929 104 TD-ALEQEILQVSSQLLEKSRQAQQ-EQDRAREISDSLSQLPQQQTEARRQLnEIERRLQTLGTPNTPLAQaQLTALQ-- 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 861 ftsavdgAENAQRAMQetINKLnqkeeqfalmssELEQLKSN----LTVMETKL--KEREEREQQLTEAKVKLENDIAEI 934
Cdd:PRK10929 180 -------AESAALKAL--VDEL------------ELAQLSANnrqeLARLRSELakKRSQQLDAYLQALRNQLNSQRQRE 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 935 MKSSGDSSAQLMKMNDElrLKERQLEQIQL--ELTKA-NEKAVQLQKNVEQTAQKAEQSQQ--ETLKTHQEE-------- 1001
Cdd:PRK10929 239 AERALESTELLAEQSGD--LPKSIVAQFKInrELSQAlNQQAQRMDLIASQQRQAASQTLQvrQALNTLREQsqwlgvsn 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1002 -----LKKMQDQLTDMKK--QMETSQNQYKDLQAKYEketsEMITKHDADikgfKQNLLDAEEALKAAQKK--NDELETQ 1072
Cdd:PRK10929 317 algeaLRAQVARLPEMPKpqQLDTEMAQLRVQRLRYE----DLLNKQPQL----RQIRQADGQPLTAEQNRilDAQLRTQ 388
|
....
gi 2024359610 1073 AEEL 1076
Cdd:PRK10929 389 RELL 392
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
2148-2165 |
5.72e-04 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 38.99 E-value: 5.72e-04
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
991-1257 |
6.20e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.01 E-value: 6.20e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 991 QQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEketsEMITKHDADIKGFKQNLLDAEEALKAAQKkndELE 1070
Cdd:PHA02562 179 LNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQ----NKYDELVEEAKTIKAEIEELTDELLNLVM---DIE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1071 TQAEELKKQAEQAKSLSSVLASARKEIELMSDK------MRDLISEKETLAQERNTLKlekesllsqhlEMESKILLVQQ 1144
Cdd:PHA02562 252 DPSAALNKLNTAAAKIKSKIEQFQKVIKMYEKGgvcptcTQQISEGPDRITKIKDKLK-----------ELQHSLEKLDT 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1145 DREELWTKNEELNSENKKILKQKeaaeAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQEndalrssestllqqLK 1224
Cdd:PHA02562 321 AIDELEEIMDEFNEQSKKLLELK----NKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEE--------------LA 382
|
250 260 270
....*....|....*....|....*....|...
gi 2024359610 1225 ELQANKDAVDVACQKHIKEREELEHYQKLLEEN 1257
Cdd:PHA02562 383 KLQDELDKIVKTKSELVKEKYHRGIVTDLLKDS 415
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
352-1084 |
6.68e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 45.17 E-value: 6.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 352 TALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRdGHDRHVLEMEAKMDQLRAMVEaadREKVELLNQ 431
Cdd:pfam01576 260 NNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEALK-TELEDTLDTTAAQQELRSKRE---QEVTELKKA 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 432 LEEEKRK---------------VEDLQFRVEEESITKGDLERKRQISEdpenTQTKLEHARIKELEQSLLFEKTKADKLQ 496
Cdd:pfam01576 336 LEEETRSheaqlqemrqkhtqaLEELTEQLEQAKRNKANLEKAKQALE----SENAELQAELRTLQQAKQDSEHKRKKLE 411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 497 RELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLE--------SSKHIDDVDTSL----SLLQEISSLQEKMAAAG 564
Cdd:pfam01576 412 GQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNeaegknikLSKDVSSLESQLqdtqELLQEETRQKLNLSTRL 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 565 KEHQREMSSLKEKFESSEEALRKEIKTLSASNERMgkenESLKTKLDHANkENSDVIELWKSKLESAIASHQQAMEELKV 644
Cdd:pfam01576 492 RQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQL----SDMKKKLEEDA-GTLEALEEGKKRLQRELEALTQQLEEKAA 566
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 645 SFNKGVGAQTAEFAELKTQMekVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKE---------------- 708
Cdd:pfam01576 567 AYDKLEKTKNRLQQELDDLL--VDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEERDRAEaeareketralslara 644
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 709 -QTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKELD----VLQAKCNEQTKLIGSLTQQIRASEEKLLDLAA-LQK 782
Cdd:pfam01576 645 lEEALEAKEELERTNKQLRAEMEDLVSSKDDVGKNVHELErskrALEQQVEEMKTQLEELEDELQATEDAKLRLEVnMQA 724
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 783 ANSEGKLEIQKLSEQ----LQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLK 858
Cdd:pfam01576 725 LKAQFERDLQARDEQgeekRRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQLKKLQ 804
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 859 EKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEakvklendiaEIMKSS 938
Cdd:pfam01576 805 AQMKDLQRELEEARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDELAD----------EIASGA 874
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 939 GDSSAQLmkmnDELRLKERQLEQIQLELTkanekavQLQKNVEQTAQKAEQSQQ--ETLKTHQEELKKMQDQLTDMKKQM 1016
Cdd:pfam01576 875 SGKSALQ----DEKRRLEARIAQLEEELE-------EEQSNTELLNDRLRKSTLqvEQLTTELAAERSTSQKSESARQQL 943
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1017 EtsqNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKA--------------AQKKNDELETQAEELKKQAEQ 1082
Cdd:pfam01576 944 E---RQNKELKAKLQEMEGTVKSKFKSSIAALEAKIAQLEEQLEQesrerqaanklvrrTEKKLKEVLLQVEDERRHADQ 1020
|
..
gi 2024359610 1083 AK 1084
Cdd:pfam01576 1021 YK 1022
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
697-1110 |
7.94e-04 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 44.44 E-value: 7.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 697 KAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEdtlNKLQEAEIKVKELDVLQAK--CNEQTKLIGSLTQQIRASEEKL 774
Cdd:PRK04778 52 KVKKLNLTGQSEEKFEEWRQKWDEIVTNSLPDIE---EQLFEAEELNDKFRFRKAKheINEIESLLDLIEEDIEQILEEL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 775 LDLAALQKANSEGKLEIQKLSEQLQAA---------------EKQIQNLETEKvggsSKVSNLTKE---LQGKEQkLLDL 836
Cdd:PRK04778 129 QELLESEEKNREEVEQLKDLYRELRKSllanrfsfgpaldelEKQLENLEEEF----SQFVELTESgdyVEAREI-LDQL 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 837 EKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQE--------TINK-LNQKEEQFALMSSELEQLKsnLTVME 907
Cdd:PRK04778 204 EEELAALEQIMEEIPELLKELQTELPDQLQELKAGYRELVEegyhldhlDIEKeIQDLKEQIDENLALLEELD--LDEAE 281
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 908 TKLKEREEREQQL---TEAKVKLENDIAEIMKSSGDSSAQLMKMNDELrlkerqleqiQLELTkanekavQLQKNVEQTA 984
Cdd:PRK04778 282 EKNEEIQERIDQLydiLEREVKARKYVEKNSDTLPDFLEHAKEQNKEL----------KEEID-------RVKQSYTLNE 344
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 985 qkaeqSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEkETSEMITKHDADIKGFKQNLLDAEEALKAAQK 1064
Cdd:PRK04778 345 -----SELESVRQLEKQLESLEKQYDEITERIAEQEIAYSELQEELE-EILKQLEEIEKEQEKLSEMLQGLRKDELEARE 418
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 2024359610 1065 KNDELETQAEELKKQAEQAKsLSSVLASARKEIELMSDKMRDLISE 1110
Cdd:PRK04778 419 KLERYRNKLHEIKRYLEKSN-LPGLPEDYLEMFFEVSDEIEALAEE 463
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1601-1864 |
8.84e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 44.53 E-value: 8.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1601 ILNRERTELQDKCQKLtG--EVENMKENLTVEkkaRILDKESfllERMELQNNIGFLEKEVEemreknKEFLTEKELLVQ 1678
Cdd:PRK05771 13 TLKSYKDEVLEALHEL-GvvHIEDLKEELSNE---RLRKLRS---LLTKLSEALDKLRSYLP------KLNPLREEKKKV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1679 EKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHScVSVMLDELQHK-------YEVTEKEKM 1751
Cdd:PRK05771 80 SVKSLEELIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIERLEPWGN-FDLDLSLLLGFkyvsvfvGTVPEDKLE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1752 ELVQENESLHAEWKS-------LVIINEeilkekeklsKEYYKLHEKVVAlleqtDADFScRLLVSEGKH--ELLLEEMS 1822
Cdd:PRK05771 159 ELKLESDVENVEYIStdkgyvyVVVVVL----------KELSDEVEEELK-----KLGFE-RLELEEEGTpsELIREIKE 222
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2024359610 1823 NLALKLREIERLQAQTfmqKFEADKRAEEVLQTMEKVTKEKD 1864
Cdd:PRK05771 223 ELEEIEKERESLLEEL---KELAKKYLEELLALYEYLEIELE 261
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
1844-2058 |
9.34e-04 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 44.07 E-value: 9.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1844 EADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELlnleNKKVEELK 1923
Cdd:pfam06160 267 EIEERIDQLYDLLEKEVDAKKYVEKNLPEIEDYLEHAEEQNKELKEELERVQQSYTLNENELERVRGL----EKQLEELE 342
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1924 KEFEALKLAAAQKSQ---QLAALQEENVKLAEELGRSRDEVTSH-QKLEEERSVLNNQLLEMKKRESTLKKEIDEER--- 1996
Cdd:pfam06160 343 KRYDEIVERLEEKEVaysELQEELEEILEQLEEIEEEQEEFKESlQSLRKDELEAREKLDEFKLELREIKRLVEKSNlpg 422
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024359610 1997 --ASLQKSISDTSALITQKDEELEKLRNEItvlrgenasaKTLQSVVKTLESDKLKLEEKVKNL 2058
Cdd:pfam06160 423 lpESYLDYFFDVSDEIEDLADELNEVPLNM----------DEVNRLLDEAQDDVDTLYEKTEEL 476
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
836-1155 |
9.54e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 43.74 E-value: 9.54e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 836 LEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREE 915
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 916 REQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETL 995
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDEL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 996 KTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEE 1075
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAIL 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1076 LKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEE 1155
Cdd:COG4372 269 VEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLV 348
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1827-2050 |
1.11e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 44.00 E-value: 1.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1827 KLREIERlQAQTFMQkfEADKRAEEVLQtmEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELdMLKQNNLKN----- 1901
Cdd:PRK12704 32 KIKEAEE-EAKRILE--EAKKEAEAIKK--EALLEAKEEIHKLRNEFEKELRERRNELQKLEKRL-LQKEENLDRklell 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1902 ---EEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKlaeelgrsrdevtshqkleeersvlnNQL 1978
Cdd:PRK12704 106 ekrEEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISGLTAEEAK--------------------------EIL 159
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024359610 1979 LEMkkrestLKKEIDEERASLQKSIsdtsalITQKDEELEKLRNEITVL-----RGENASAKTLqSVVkTLESDKLK 2050
Cdd:PRK12704 160 LEK------VEEEARHEAAVLIKEI------EEEAKEEADKKAKEILAQaiqrcAADHVAETTV-SVV-NLPNDEMK 222
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
863-1093 |
1.15e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.67 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 863 SAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDsS 942
Cdd:COG3883 13 FADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGE-R 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 943 AQLMKMNDELRLKERQLEQIQlELTKANEKAVQLQKNVEQTAQKAEQ--SQQETLKTHQEELKKMQDQLTDMKKQMETSQ 1020
Cdd:COG3883 92 ARALYRSGGSVSYLDVLLGSE-SFSDFLDRLSALSKIADADADLLEElkADKAELEAKKAELEAKLAELEALKAELEAAK 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024359610 1021 NQYKDLQAKYEKETsemitkhdADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASA 1093
Cdd:COG3883 171 AELEAQQAEQEALL--------AQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
692-840 |
1.20e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 44.30 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 692 EIEALKAKLLEVTEEKEQtlenLKAKLESVEDQHLVEMEDTLNKLQEaeikvkELDVLQAKCNEQTKLIGSLTQQIRASE 771
Cdd:COG0542 412 ELDELERRLEQLEIEKEA----LKKEQDEASFERLAELRDELAELEE------ELEALKARWEAEKELIEEIQELKEELE 481
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024359610 772 EKLLDLAALQKAnsegkleiqklSEQLQAAEKQIQNLETEKVGGS---SKVSNLT-----KELQGKEQKLLDLEKNL 840
Cdd:COG0542 482 QRYGKIPELEKE-----------LAELEEELAELAPLLREEVTEEdiaEVVSRWTgipvgKLLEGEREKLLNLEEEL 547
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
1844-1992 |
1.21e-03 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 44.06 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1844 EADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELlnleNKKVEELK 1923
Cdd:PRK04778 286 EIQERIDQLYDILEREVKARKYVEKNSDTLPDFLEHAKEQNKELKEEIDRVKQSYTLNESELESVRQL----EKQLESLE 361
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024359610 1924 KEFEALKLAAAQKSQ---QLAALQEENVKLAEELGRSRDEVTSH-QKLEEERSVLNNQLLEMKKRESTLKKEI 1992
Cdd:PRK04778 362 KQYDEITERIAEQEIaysELQEELEEILKQLEEIEKEQEKLSEMlQGLRKDELEAREKLERYRNKLHEIKRYL 434
|
|
| ClyA_NheA-like |
cd22654 |
Bacillus cereus non-hemolytic enterotoxin (Nhe) component A (NheA), and similar proteins; This ... |
762-1041 |
1.26e-03 |
|
Bacillus cereus non-hemolytic enterotoxin (Nhe) component A (NheA), and similar proteins; This model contains Bacillus cereus tripartite non-hemolytic enterotoxin (Nhe) component A (NheA), a member of the cytolysin A (ClyA) family of alpha pore-forming toxins (alpha-PFTs). Non-hemolytic enterotoxin (Nhe), despite its name, is hemolytic and able to lyse erythrocytes from various mammalian organisms. It consists of three proteins, NheA, NheB and NheC, encoded by one operon containing three genes nheA, nheB and nheC, respectively. Separately, these three proteins show no toxicity; maximal activity is seen only when all three components are presented. The NheB and NheC components are able to bind to cell membranes while NheA is not; NheC primes the host cell for the formation of ion permeable NheB/C pores. Binding of NheA to NheB/NheC is thought to be the final stage of pore formation. Structure of NheA shows an elongated, almost entirely alpha-helical protein with an enlarged "head" domain compared with other cytolysins, displaying on its surface an enlarged beta-tongue which is of amphipathic rather than hydrophobic nature. It has been proposed that NheA could even form beta-barrel pores.
Pssm-ID: 439152 [Multi-domain] Cd Length: 333 Bit Score: 43.41 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 762 SLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNletekvggsskvsnltkelqgkeqkllDLEKNLS 841
Cdd:cd22654 66 NFSQRFNNYYDKLYDLAGKINEDEQAKEDFLNGINKLQSQLQTIQN---------------------------SMEQTSS 118
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 842 AVNQVKDSLEKELQLLKEKFTSAVD--GAENAQRA-MQETINKLNQ--KEEQFALMSSELEQLKSNLTVMETKLKEREER 916
Cdd:cd22654 119 NLNRFKTLLDADSKNFSTDAKKAIDslSGSNGEIAqLRTQIKTINDeiQEELTKILNRPIEVGDGSINIGKQVFTITITT 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 917 EQQLTEAKVKLENDIAEIMKSSGDssaQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAE--QSQQET 994
Cdd:cd22654 199 ATTKTVDVTSIGGLINGIGNASDD---EVKEAANKIQQKQKELVDLIKKLSDAEIQATQLTLVEDQVNGFTEliKRQIAT 275
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 2024359610 995 LKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYE--KETSEMITKH 1041
Cdd:cd22654 276 LENLVEDWEMLNQNMNQLQTNVNSGKIDSKLLQKQLKqiKKISDELNKQ 324
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1821-2000 |
1.38e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.99 E-value: 1.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1821 MSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQ--NN 1898
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKllQL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1899 LKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRS--------RDEVTSHQKLEEE 1970
Cdd:COG4717 128 LPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLslateeelQDLAEELEELQQR 207
|
170 180 190
....*....|....*....|....*....|
gi 2024359610 1971 RSVLNNQLLEMKKRESTLKKEIDEERASLQ 2000
Cdd:COG4717 208 LAELEEELEEAQEELEELEEELEQLENELE 237
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
658-794 |
1.39e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.61 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 658 AELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEvteeKEQTLENLKAKLESVEDQHLVEMEDTLNKLQ 737
Cdd:PRK12704 49 KEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQ----KEENLDRKLELLEKREEELEKKEKELEQKQQ 124
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359610 738 EAEIKVKELDVLQAKCNEQTKLIGSLTQqirasEE--KLLdlaaLQKANSEGKLEIQKL 794
Cdd:PRK12704 125 ELEKKEEELEELIEEQLQELERISGLTA-----EEakEIL----LEKVEEEARHEAAVL 174
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
550-992 |
1.45e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.60 E-value: 1.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 550 LQEISSLQEKMAAAGKEHQ--REMSSLKEKFESSEEALRKEIKTLSASNERMGK--ENESLKTKLDHANKENSDVIELWK 625
Cdd:COG4717 70 LKELKELEEELKEAEEKEEeyAELQEELEELEEELEELEAELEELREELEKLEKllQLLPLYQELEALEAELAELPERLE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 626 sKLESAIASHQQAMEELKvsfnkgvgAQTAEFAELKTQMEkvklDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTE 705
Cdd:COG4717 150 -ELEERLEELRELEEELE--------ELEAELAELQEELE----ELLEQLSLATEEELQDLAEELEELQQRLAELEEELE 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 706 EKEQTLENLKAKLESVEDQHlvEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQ--QIRASEEKLLDLAALQKA 783
Cdd:COG4717 217 EAQEELEELEEELEQLENEL--EAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTiaGVLFLVLGLLALLFLLLA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 784 NSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEqkLLDLEKNLSAVNQVKDSLEKELQL------L 857
Cdd:COG4717 295 REKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLE--LLDRIEELQELLREAEELEEELQLeeleqeI 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 858 KEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVM--ETKLKEREEREQQLTEAKVKLENDIAEIM 935
Cdd:COG4717 373 AALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELleALDEEELEEELEELEEELEELEEELEELR 452
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024359610 936 KSSGDSSAQLMKMN-----DELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQ 992
Cdd:COG4717 453 EELAELEAELEQLEedgelAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREERL 514
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
479-890 |
1.54e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.60 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 479 KELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALR--VKEVAELRGRLESSkhIDDVDTSLSLLQEISSL 556
Cdd:COG4717 84 EEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLplYQELEALEAELAEL--PERLEELEERLEELREL 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 557 QEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVielwKSKLESAIASHQ 636
Cdd:COG4717 162 EEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEEL----EEELEQLENELE 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 637 QAMEELKVSFNKGVGAQTAEFAELKTQMEKVKLDYENE----------MSNLKLKQENEKSQHLKEIEALKAkLLEVTEE 706
Cdd:COG4717 238 AAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIagvlflvlglLALLFLLLAREKASLGKEAEELQA-LPALEEL 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 707 KEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKELDVL--QAKCNEQTKLIGSLTQQIRA-SEEKLLDLAALQKA 783
Cdd:COG4717 317 EEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELeeELQLEELEQEIAALLAEAGVeDEEELRAALEQAEE 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 784 NSEGKLEIQKLSEQLQAAEKQIQNLETEKVGgsskvSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKfts 863
Cdd:COG4717 397 YQELKEELEELEEQLEELLGELEELLEALDE-----EELEEELEELEEELEELEEELEELREELAELEAELEQLEED--- 468
|
410 420
....*....|....*....|....*..
gi 2024359610 864 avDGAENAQRAMQETINKLNQKEEQFA 890
Cdd:COG4717 469 --GELAELLQELEELKAELRELAEEWA 493
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
1067-1454 |
1.57e-03 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 43.13 E-value: 1.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1067 DELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDR 1146
Cdd:pfam19220 20 EDLRSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERAAYGKLRRELAGLTRRLSAAEGELEELVARLAKLEAAL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1147 EELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKEL 1226
Cdd:pfam19220 100 REAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEEENKALREEAQAAEKALQRAEGELATARERLALLEQENRRL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1227 QANKDAVDVACQKHIKEREELEhyqKLLEENDRVIkdkDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDL 1306
Cdd:pfam19220 180 QALSEEQAAELAELTRRLAELE---TQLDATRARL---RALEGQLAAEQAERERAEAQLEEAVEAHRAERASLRMKLEAL 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1307 KSTHIALkneiDCLLQTNRSLQSEKEMLLKSREElcvSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKAS 1386
Cdd:pfam19220 254 TARAAAT----EQLLAEARNQLRDRDEAIRAAER---RLKEASIERDTLERRLAGLEADLERRTQQFQEMQRARAELEER 326
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359610 1387 LSSLSNFLEEmKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETA 1454
Cdd:pfam19220 327 AEMLTKALAA-KDAALERAEERIASLSDRIAELTKRFEVERAALEQANRRLKEELQRERAERALAQGA 393
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
693-966 |
1.64e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.75 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 693 IEALKAKLLEVTEEkeqtLENLKAKLESVEDQHlvemeDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEE 772
Cdd:COG4913 612 LAALEAELAELEEE----LAEAEERLEALEAEL-----DALQERREALQRLAEYSWDEIDVASAEREIAELEAELERLDA 682
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 773 KLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEkvggsskVSNLTKELQGKEQKLLDLEKnlSAVNQVKDSLEK 852
Cdd:COG4913 683 SSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKE-------LEQAEEELDELQDRLEAAED--LARLELRALLEE 753
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 853 EL-QLLKEKFTSAVdgAENAQRAMQETINKLNQKEEQFA-LMSSELEQLKSNLTVMETKLKEREEREQQLTEAK----VK 926
Cdd:COG4913 754 RFaAALGDAVEREL--RENLEERIDALRARLNRAEEELErAMRAFNREWPAETADLDADLESLPEYLALLDRLEedglPE 831
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2024359610 927 LENDIAE-IMKSSGDSSAQL-MKMNDELRLKERQLEQIQLEL 966
Cdd:COG4913 832 YEERFKElLNENSIEFVADLlSKLRRAIREIKERIDPLNDSL 873
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1068-1669 |
1.76e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.75 E-value: 1.76e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1068 ELETQAEELKKQAEQAKSLSSVLASARKEIELMSDkMRDLISEKETLAQERNTLKLEKESLlsQHLEMESKILLVQQDRE 1147
Cdd:COG4913 222 DTFEAADALVEHFDDLERAHEALEDAREQIELLEP-IRELAERYAAARERLAELEYLRAAL--RLWFAQRRLELLEAELE 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1148 ELwtkneelnsenkkilkQKEAAEAKSRQESTEKvalisekskllsEIETAQADLLKITQendALRSSESTLLQQLKELQ 1227
Cdd:COG4913 299 EL----------------RAELARLEAELERLEA------------RLDALREELDELEA---QIRGNGGDRLEQLEREI 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1228 ANKdavdvacQKHIKERE-ELEHYQKLLEendrvikdkdDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDL 1306
Cdd:COG4913 348 ERL-------ERELEERErRRARLEALLA----------ALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEA 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1307 KSTHIALKNEIDCLLQTNRSLQSEK----EMLLKSREELCvslantanenQALKLRKDE-------MQTELETER----- 1370
Cdd:COG4913 411 EAALRDLRRELRELEAEIASLERRKsnipARLLALRDALA----------EALGLDEAElpfvgelIEVRPEEERwrgai 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1371 ---------------EKLEKMTK--DNMDLKASLSS--LSNFLEEMKSSREASNS--EKIHLLQEALFASEQRLLAER-- 1427
Cdd:COG4913 481 ervlggfaltllvppEHYAAALRwvNRLHLRGRLVYerVRTGLPDPERPRLDPDSlaGKLDFKPHPFRAWLEAELGRRfd 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1428 -------EELVNENKAVT-EKLTKATADA-------------VLAETAfTEKINELNLEKesvfskslqfekhnEALLRE 1486
Cdd:COG4913 561 yvcvdspEELRRHPRAITrAGQVKGNGTRhekddrrrirsryVLGFDN-RAKLAALEAEL--------------AELEEE 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1487 KDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTtlkysIEALEEELKKKNLENQELIAcrsdLSDLLKE 1566
Cdd:COG4913 626 LAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAERE-----IAELEAELERLDASSDDLAA----LEEQLEE 696
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1567 AQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQK-LTGEVENMKENLTVEKKARILdKESFLLER 1645
Cdd:COG4913 697 LEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLeLRALLEERFAAALGDAVEREL-RENLEERI 775
|
650 660
....*....|....*....|....*
gi 2024359610 1646 MELQNNIGFLEKEVEE-MREKNKEF 1669
Cdd:COG4913 776 DALRARLNRAEEELERaMRAFNREW 800
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1783-1999 |
1.83e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.75 E-value: 1.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1783 KEYYKLHEKVVALLEQTDAdfscrLLVSEGKHELLLEEMSNLALKLREIERLQAqtfmqkFEADKRAEEVLQTMEKVTKE 1862
Cdd:COG4913 235 DDLERAHEALEDAREQIEL-----LEPIRELAERYAAARERLAELEYLRAALRL------WFAQRRLELLEAELEELRAE 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1863 KDAIHQEKIETLASLENSRQTNEKLQNELDmlkQNNLKNEEELTKSKELLNLE----NKKVEELKKEFEALKLAAAQKSQ 1938
Cdd:COG4913 304 LARLEAELERLEARLDALREELDELEAQIR---GNGGDRLEQLEREIERLEREleerERRRARLEALLAALGLPLPASAE 380
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359610 1939 QLAALQEENVKLAEELGRSRDEV--------TSHQKLEEERSVLNNQLLEMKKRESTLKKEIDEERASL 1999
Cdd:COG4913 381 EFAALRAEAAALLEALEEELEALeealaeaeAALRDLRRELRELEAEIASLERRKSNIPARLLALRDAL 449
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1165-1404 |
2.13e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 2.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1165 KQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQAdllKITQENDALRSSESTLLQQLKELQANkdavdvacqkhikeR 1244
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALER---RIAALARRIRALEQELAALEAELAEL--------------E 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1245 EELEHYQKLLEENDRVIKDKDDVIQRL-QSSYDDLARNQRELLQEVSILTAerdsaqekdldLKSTHIALKNEIDCLLQT 1323
Cdd:COG4942 90 KEIAELRAELEAQKEELAELLRALYRLgRQPPLALLLSPEDFLDAVRRLQY-----------LKYLAPARREQAEELRAD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1324 NRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREA 1403
Cdd:COG4942 159 LAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
.
gi 2024359610 1404 S 1404
Cdd:COG4942 239 A 239
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
1868-1994 |
2.18e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 43.28 E-value: 2.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1868 QEKIETL-ASLENSRQTNEKLQNELDMLKQNNLKNEEELtkskellnleNKKVEELKKEFEALKLAAAQKSQQ-LAALQE 1945
Cdd:PRK00409 515 KEKLNELiASLEELERELEQKAEEAEALLKEAEKLKEEL----------EEKKEKLQEEEDKLLEEAEKEAQQaIKEAKK 584
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 2024359610 1946 ENVKLAEELGRSRDEVTSHQK---LEEERSVLNNQLLEMKKRESTLKKEIDE 1994
Cdd:PRK00409 585 EADEIIKELRQLQKGGYASVKaheLIEARKRLNKANEKKEKKKKKQKEKQEE 636
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
831-1305 |
2.24e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.37 E-value: 2.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 831 QKLLDLEKNLSAVNQVKDSLEkELQLLKEKFTSAVDGAEnAQRAMQETINKLnQKEEQFALMSSELEQLKSNLTVMETKL 910
Cdd:COG4913 235 DDLERAHEALEDAREQIELLE-PIRELAERYAAARERLA-ELEYLRAALRLW-FAQRRLELLEAELEELRAELARLEAEL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 911 KEREEREQQLTEAKVKLENDIAEimkSSGDSSAQLMKmndELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQ--KAE 988
Cdd:COG4913 312 ERLEARLDALREELDELEAQIRG---NGGDRLEQLER---EIERLERELEERERRRARLEALLAALGLPLPASAEefAAL 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 989 QSQ-QETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAkyeketsemitkhdaDIKGFKQN-------LLDAEEALK 1060
Cdd:COG4913 386 RAEaAALLEALEEELEALEEALAEAEAALRDLRRELRELEA---------------EIASLERRksniparLLALRDALA 450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1061 AA-QKKNDELETQAEELKKQAEQAK--------------SL---SSVLASARKEIE-------LMSDKMRDLISEKETLA 1115
Cdd:COG4913 451 EAlGLDEAELPFVGELIEVRPEEERwrgaiervlggfalTLlvpPEHYAAALRWVNrlhlrgrLVYERVRTGLPDPERPR 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1116 QERNTL--KLE-KESLLSQHLEME--SKILLVQQDREE--------------------LWTKNEE----------LNSEN 1160
Cdd:COG4913 531 LDPDSLagKLDfKPHPFRAWLEAElgRRFDYVCVDSPEelrrhpraitragqvkgngtRHEKDDRrrirsryvlgFDNRA 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1161 KKILKQKEAAEAKSR-QESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLL---QQLKELQANKDAVDVA 1236
Cdd:COG4913 611 KLAALEAELAELEEElAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREIAeleAELERLDASSDDLAAL 690
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359610 1237 cqkhikeREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLD 1305
Cdd:COG4913 691 -------EEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLE 752
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
349-614 |
2.46e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 2.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 349 SGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlvrdghdrhvlEMEAKMDQLRAMVEAADREKVEL 428
Cdd:COG4942 13 LAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLA-----------ALERRIAALARRIRALEQELAAL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 429 LNQLEEEKRKVEDLQFRVEeesitkgdlERKRQISEDPENTQTKLEHARIKeleqsLLFEKTKADKLQRELEDTRVATVS 508
Cdd:COG4942 82 EAELAELEKEIAELRAELE---------AQKEELAELLRALYRLGRQPPLA-----LLLSPEDFLDAVRRLQYLKYLAPA 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 509 EKSRIMELERDLAlrvkEVAELRGRLESSKhiddvDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSE---EAL 585
Cdd:COG4942 148 RREQAEELRADLA----ELAALRAELEAER-----AELEALLAELEEERAALEALKAERQKLLARLEKELAELAaelAEL 218
|
250 260
....*....|....*....|....*....
gi 2024359610 586 RKEIKTLSASNERMGKENESLKTKLDHAN 614
Cdd:COG4942 219 QQEAEELEALIARLEAEAAAAAERTPAAG 247
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
355-748 |
2.59e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.80 E-value: 2.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 355 QEALK-EKQQHIEQLLAERDLERAEVAKAtshvGEIEQELALVRDgHDRHVLEMEAKMDQLRamveaadrekvellnqLE 433
Cdd:pfam17380 298 QERLRqEKEEKAREVERRRKLEEAEKARQ----AEMDRQAAIYAE-QERMAMERERELERIR----------------QE 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 434 EEKRKVEdlqfRVEEESITkgdlerkrqisedpentqtkLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRi 513
Cdd:pfam17380 357 ERKRELE----RIRQEEIA--------------------MEISRMRELERLQMERQQKNERVRQELEAARKVKILEEER- 411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 514 melERDLALRVKEVAELRGRLESSKhiddvdtslsllqeisslqekmaaagkehQREMSSLKEKFESSEEALRKEIKTLS 593
Cdd:pfam17380 412 ---QRKIQQQKVEMEQIRAEQEEAR-----------------------------QREVRRLEEERAREMERVRLEEQERQ 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 594 ASNERMGKENESLKTK---LDHANKENSDVIELWKSKLESAIASHQQAMEElkvsfnkgvgaQTAEFAELKTQMEKVKLD 670
Cdd:pfam17380 460 QQVERLRQQEEERKRKkleLEKEKRDRKRAEEQRRKILEKELEERKQAMIE-----------EERKRKLLEKEMEERQKA 528
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359610 671 YENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEkeqtlenlKAKLESVEDQhlvemEDTLNKLQEAEIKVKELDV 748
Cdd:pfam17380 529 IYEEERRREAEEERRKQQEMEERRRIQEQMRKATEE--------RSRLEAMERE-----REMMRQIVESEKARAEYEA 593
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1619-2121 |
2.75e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 42.81 E-value: 2.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1619 EVENMKENLTVEKKARILDKESfllERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIkEKMILY 1698
Cdd:pfam05557 6 ESKARLSQLQNEKKQMELEHKR---ARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALREQA-ELNRLK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1699 KETEQLASKIEQLKSDftslsvSKAELEDVHSCVSVMLDELQHKYEVTE-------KEKMELVQENESLHAEWKSLVIIN 1771
Cdd:pfam05557 82 KKYLEALNKKLNEKES------QLADAREVISCLKNELSELRRQIQRAElelqstnSELEELQERLDLLKAKASEAEQLR 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1772 EEILKEKEKLSKEYYKLHEKVVALLEQTDAdfscRLLVSEGKHELLleemsNLALKLREIERLQAQTfmQKFEADKRAEE 1851
Cdd:pfam05557 156 QNLEKQQSSLAEAEQRIKELEFEIQSQEQD----SEIVKNSKSELA-----RIPELEKELERLREHN--KHLNENIENKL 224
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1852 VLQTMEKVTKEKDAIHQEKIETLASLEnsrQTNEKLQNELDMLKQNNLKNEEELTKSKELLNlenkKVEELKKEFEALKL 1931
Cdd:pfam05557 225 LLKEEVEDLKRKLEREEKYREEAATLE---LEKEKLEQELQSWVKLAQDTGLNLRSPEDLSR----RIEQLQQREIVLKE 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1932 AAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLlemKKRESTLKKEIDEERASLQK-----SISDT 2006
Cdd:pfam05557 298 ENSSLTSSARQLEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRL---QRRVLLLTKERDGYRAILESydkelTMSNY 374
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 2007 SALITQKDEELEKLRNEITVLRGEnasaktLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSgdiaanllQD 2086
Cdd:pfam05557 375 SPQLLERIEEAEDMTQKMQAHNEE------MEAQLSVAEEELGGYKQQAQTLERELQALRQQESLADPSY--------SK 440
|
490 500 510
....*....|....*....|....*....|....*
gi 2024359610 2087 ESAEDKQQEIDFLNSVIVDLQRRNEELNLKIQRMC 2121
Cdd:pfam05557 441 EEVDSLRRKLETLELERQRLREQKNELEMELERRC 475
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1403-1625 |
2.80e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 2.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1403 ASNSEKIHLLQEALFASEQRLlAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEA 1482
Cdd:COG4942 16 AAQADAAAEAEAELEQLQQEI-AELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1483 LLREKDELERKYSELLDE--KKSLENAFSDMKREQELDFSAKRL--LVQENTTLKYSIEALEEELKKKNLENQELIACRS 1558
Cdd:COG4942 95 LRAELEAQKEELAELLRAlyRLGRQPPLALLLSPEDFLDAVRRLqyLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024359610 1559 DLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKE 1625
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
463-699 |
2.90e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 2.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 463 SEDPENTQTKLE--HARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRlesskhI 540
Cdd:COG4942 19 ADAAAEAEAELEqlQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE------I 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 541 DDVDTSLSLLQEisSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKeIKTLSASNERMGKENESLKTKLDHANKENSDv 620
Cdd:COG4942 93 AELRAELEAQKE--ELAELLRALYRLGRQPPLALLLSPEDFLDAVRR-LQYLKYLAPARREQAEELRADLAELAALRAE- 168
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359610 621 IELWKSKLESAIASHQQAMEELKvsfnkgvgAQTAEFAELKTQMEKVKLDYENEMSNLKlKQENEKSQHLKEIEALKAK 699
Cdd:COG4942 169 LEAERAELEALLAELEEERAALE--------ALKAERQKLLARLEKELAELAAELAELQ-QEAEELEALIARLEAEAAA 238
|
|
| CCDC73 |
pfam15818 |
Coiled-coil domain-containing protein 73 family; CCDC73 is a family of eukaryotic coiled-coil ... |
1634-1990 |
3.01e-03 |
|
Coiled-coil domain-containing protein 73 family; CCDC73 is a family of eukaryotic coiled-coil containing proteins. The function is not known. The alternative name is sarcoma antigen NY-SAR-79.
Pssm-ID: 464893 [Multi-domain] Cd Length: 1048 Bit Score: 43.01 E-value: 3.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1634 RILDKESFLLERME-----------LQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETE 1702
Cdd:pfam15818 1 QLLDFKTSLLEALEelrmrreaetqYEEQIGKIIVETQELKWQKETLQNQKETLAKQHKEAMAVFKKQLQMKMCALEEEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1703 ---QLASK-----IEQLKSDFTSLSVSKAELEDVhscVSVMLDELQ----------------HKYEVTEKEKMELVQEN- 1757
Cdd:pfam15818 81 gkyQLATEikekeIEGLKETLKALQVSKYSLQKK---VSEMEQKLQlhllakedhhkqlneiEKYYATITGQFGLVKENh 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1758 ESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKvvalLEQTDADFSCRLLVSEGKHElllEEMSNLALKLREIERLQAQ 1837
Cdd:pfam15818 158 GKLEQNVQEAIQLNKRLSALNKKQESEICSLKKE----LKKVTSDLIKSKVTCQYKMG---EENINLTIKEQKFQELQER 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1838 TFMQkfeadkraeevLQTMEKVTKEKDAIHQEKIETLAS-------LENSRQTNEKLQNELDMLKQNN--LKNEEELTKS 1908
Cdd:pfam15818 231 LNME-----------LELNKKINEEITHIQEEKQDIIISfqhmqqlLQQQTQANTEMEAELKALKENNqtLERDNELQRE 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1909 K------ELLNLENKKVEEL---KKEFEALKLAAAQKSQQLAALQEENVKLAEElgrsRDEVTSHQKLEEERSVLNNQLL 1979
Cdd:pfam15818 300 KvkeneeKFLNLQNEHEKALgtwKKHVEELNGEINEIKNELSSLKETHIKLQEH----YNKLCNQKKFEEDKKFQNVPEV 375
|
410
....*....|.
gi 2024359610 1980 EMKKRESTLKK 1990
Cdd:pfam15818 376 NNENSEMSTEK 386
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
728-1011 |
3.38e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 42.61 E-value: 3.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 728 EMEDTLNKLQEAEIkVKELDVLQAKCNEQTKLIGSLTQQIraseEKLLDLaaLQKANSEGKLEIQKLSE-QLQAAEKQIQ 806
Cdd:PRK05771 17 YKDEVLEALHELGV-VHIEDLKEELSNERLRKLRSLLTKL----SEALDK--LRSYLPKLNPLREEKKKvSVKSLEELIK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 807 NLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDsLEKELQLLKE-KFTSAVDGaenaqramqeTINKlNQK 885
Cdd:PRK05771 90 DVEEELEKIEKEIKELEEEISELENEIKELEQEIERLEPWGN-FDLDLSLLLGfKYVSVFVG----------TVPE-DKL 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 886 EEQFALMSS----ELEQLKSNLTVMETKLKEREEreQQLTEAKvKLENDIAEImKSSGDSSAQLMKMNDELRLKERQLEQ 961
Cdd:PRK05771 158 EELKLESDVenveYISTDKGYVYVVVVVLKELSD--EVEEELK-KLGFERLEL-EEEGTPSELIREIKEELEEIEKERES 233
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359610 962 IQLELTKANEKAVQLQKNV----EQTAQKAEQSQQ--ETLKT----------HQEELKKMQDQLTD 1011
Cdd:PRK05771 234 LLEELKELAKKYLEELLALyeylEIELERAEALSKflKTDKTfaiegwvpedRVKKLKELIDKATG 299
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
526-853 |
3.45e-03 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 42.53 E-value: 3.45e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 526 EVAELRGRLESSKHIDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSsLKEKFESseeaLRKEIKTLSASNERMgkeNES 605
Cdd:PLN03229 437 EVEKLKEQILKAKESSSKPSELALNEMIEKLKKEIDLEYTEAVIAMG-LQERLEN----LREEFSKANSQDQLM---HPV 508
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 606 LKTKLDHANKEnsdvielWKSKLESA--IASHQQAMEELKvSFNKGVGAqtaefAELKTQMEKVKLDYenemsNLKLKQE 683
Cdd:PLN03229 509 LMEKIEKLKDE-------FNKRLSRApnYLSLKYKLDMLN-EFSRAKAL-----SEKKSKAEKLKAEI-----NKKFKEV 570
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 684 NEKSQHLKEIEALKAKLLEVTEEKEQTL-ENLKAKLESVEDQHLVEMEDTLNK--LQEAEIKVKELDVLQAKCNEQTKL- 759
Cdd:PLN03229 571 MDRPEIKEKMEALKAEVASSGASSGDELdDDLKEKVEKMKKEIELELAGVLKSmgLEVIGVTKKNKDTAEQTPPPNLQEk 650
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 760 IGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQ-IQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEK 838
Cdd:PLN03229 651 IESLNEEINKKIERVIRSSDLKSKIELLKLEVAKASKTPDVTEKEkIEALEQQIKQKIAEALNSSELKEKFEELEAELAA 730
|
330
....*....|....*
gi 2024359610 839 NLSAVNQVKDSLEKE 853
Cdd:PLN03229 731 ARETAAESNGSLKND 745
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
788-957 |
3.64e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 42.38 E-value: 3.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 788 KLEIQKLSEQLQAAEKQIQNLETEkvggsskvsnltKELQGKEQKLLDLEKnlsavnqvKDSLEKELQLLKEKFtsavDG 867
Cdd:COG0542 403 RMEIDSKPEELDELERRLEQLEIE------------KEALKKEQDEASFER--------LAELRDELAELEEEL----EA 458
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 868 AENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEreerEQQLTEAKVKlENDIAEIM-KSSG------- 939
Cdd:COG0542 459 LKARWEAEKELIEEIQELKEELEQRYGKIPELEKELAELEEELAE----LAPLLREEVT-EEDIAEVVsRWTGipvgkll 533
|
170
....*....|....*....
gi 2024359610 940 -DSSAQLMKMNDElrLKER 957
Cdd:COG0542 534 eGEREKLLNLEEE--LHER 550
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
877-1247 |
3.94e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.59 E-value: 3.94e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 877 ETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMND------ 950
Cdd:PRK11281 46 DALNKQKLLEAEDKLVQQDLEQTLALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLStlslrq 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 951 -ELRLKER--QLEQIQLELTKANEKAVQLQKNVEQtAQKA-EQSQQETlkthqEELKKMQDQLTDMKKQMETSQnqykdl 1026
Cdd:PRK11281 126 lESRLAQTldQLQNAQNDLAEYNSQLVSLQTQPER-AQAAlYANSQRL-----QQIRNLLKGGKVGGKALRPSQ------ 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1027 QAKYEKETSEMITKHDadikgFKQNLLDAEEALKA-AQKKNDELetqAEELKKQAEQAKSLSSVLASarKEIELMSDKMR 1105
Cdd:PRK11281 194 RVLLQAEQALLNAQND-----LQRKSLEGNTQLQDlLQKQRDYL---TARIQRLEHQLQLLQEAINS--KRLTLSEKTVQ 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1106 DLISEKETLAQERNTLkLEKESLLSQHLemeSKILLVQQDR------EELWTKN--EELNSENKKILKQKEAAEAK---S 1174
Cdd:PRK11281 264 EAQSQDEAARIQANPL-VAQELEINLQL---SQRLLKATEKlntltqQNLRVKNwlDRLTQSERNIKEQISVLKGSlllS 339
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359610 1175 RQESTEKVALISekSKLLSEIETAQADL----LKITQENDALrSSESTLLQQLKELQANK--DAVDVACQKHIKEREEL 1247
Cdd:PRK11281 340 RILYQQQQALPS--ADLIEGLADRIADLrleqFEINQQRDAL-FQPDAYIDKLEAGHKSEvtDEVRDALLQLLDERREL 415
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1843-2071 |
4.05e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 42.58 E-value: 4.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1843 FEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKEllnlENKKVEEL 1922
Cdd:PLN02939 124 QLSDFQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQGKINILEMRLSETDARIKLAAQ----EKIHVEIL 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1923 KKEFEALKLAAAQK-----------SQQLAALQEENVKLAEELGRSRDEVTSHQ-------KLEEERSVLNNQLLEMKKR 1984
Cdd:PLN02939 200 EEQLEKLRNELLIRgateglcvhslSKELDVLKEENMLLKDDIQFLKAELIEVAeteervfKLEKERSLLDASLRELESK 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1985 ----------ESTLKKEIDEERA-SLQ------KSISDTSALITQKDEELEKLRNEItvlrgeNASAKtlQSVVKTLESD 2047
Cdd:PLN02939 280 fivaqedvskLSPLQYDCWWEKVeNLQdlldraTNQVEKAALVLDQNQDLRDKVDKL------EASLK--EANVSKFSSY 351
|
250 260
....*....|....*....|....*
gi 2024359610 2048 KLKL-EEKVKNLEQKLKAKSEQPLT 2071
Cdd:PLN02939 352 KVELlQQKLKLLEERLQASDHEIHS 376
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
583-904 |
4.14e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 42.25 E-value: 4.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 583 EALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAE----FA 658
Cdd:COG5185 242 ESELEDLAQTSDKLEKLVEQNTDLRLEKLGENAESSKRLNENANNLIKQFENTKEKIAEYTKSIDIKKATESLEeqlaAA 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 659 ELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEqtLENLKAKLESVEDQHLVEMEDTLNKLQE 738
Cdd:COG5185 322 EAEQELEESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVE--LSKSSEELDSFKDTIESTKESLDEIPQN 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 739 AEIKVKELDVLQAKcneqtkligSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSK 818
Cdd:COG5185 400 QRGYAQEILATLED---------TLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREADEESQSRLEEAYD 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 819 VSNltkelQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQ 898
Cdd:COG5185 471 EIN-----RSVRSKKEDLNEELTQIESRVSTLKATLEKLRAKLERQLEGVRSKLDQVAESLKDFMRARGYAHILALENLI 545
|
....*.
gi 2024359610 899 LKSNLT 904
Cdd:COG5185 546 PASELI 551
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
760-1227 |
4.56e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.06 E-value: 4.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 760 IGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGS--SKVSNLTKELQGKEQKLLDLE 837
Cdd:COG4717 73 LKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPlyQELEALEAELAELPERLEELE 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 838 KNLSAVNQvkdsLEKELQLLKEKftsavdgAENAQRAMQETINKLNQKEEQfalmssELEQLKSNLTVMETKLKEREERE 917
Cdd:COG4717 153 ERLEELRE----LEEELEELEAE-------LAELQEELEELLEQLSLATEE------ELQDLAEELEELQQRLAELEEEL 215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 918 QQLTEAKVKLENDIAEImkssgdsSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKT 997
Cdd:COG4717 216 EEAQEELEELEEELEQL-------ENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLAL 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 998 HQEELKKMQDQLTDMKKQMEtSQNQYKDLQakyEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELK 1077
Cdd:COG4717 289 LFLLLAREKASLGKEAEELQ-ALPALEELE---EEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQ 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1078 KQ---AEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILlvQQDREELWTKNE 1154
Cdd:COG4717 365 LEeleQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEEL--EEELEELEEELE 442
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024359610 1155 ELNSENKKILKQKEAAEAKSRQESTEKvalisEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQ 1227
Cdd:COG4717 443 ELEEELEELREELAELEAELEQLEEDG-----ELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYR 510
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1458-1925 |
4.57e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 42.31 E-value: 4.57e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1458 KINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIE 1537
Cdd:TIGR04523 191 KIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLS 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1538 ALEEELKK-----KNLENQeLIACRSDLSDLLKE-AQDARRTLENELAAVSHAKQVLSS-------SFNTCSSDIEILNR 1604
Cdd:TIGR04523 271 EKQKELEQnnkkiKELEKQ-LNQLKSEISDLNNQkEQDWNKELKSELKNQEKKLEEIQNqisqnnkIISQLNEQISQLKK 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1605 ERTELQDKCQKLTGEVENMKENLTVEKKarilDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSE 1684
Cdd:TIGR04523 350 ELTNSESENSEKQRELEEKQNEIEKLKK----ENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLE 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1685 TKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVM-------LDELQHKYEVTEKEKMELVQEN 1757
Cdd:TIGR04523 426 KEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSinkikqnLEQKQKELKSKEKELKKLNEEK 505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1758 ESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQTDADfscrllVSEGKHELLLEEMSNLALKLREIERLQAQ 1837
Cdd:TIGR04523 506 KELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKD------DFELKKENLEKEIDEKNKEIEELKQTQKS 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1838 TFMQKFEADKRAEEVLQTMEKVTKEKdaihQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENK 1917
Cdd:TIGR04523 580 LKKKQEEKQELIDQKEKEKKDLIKEI----EEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIK 655
|
....*...
gi 2024359610 1918 KVEELKKE 1925
Cdd:TIGR04523 656 EIRNKWPE 663
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
869-1211 |
4.69e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.81 E-value: 4.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 869 ENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKM 948
Cdd:COG4372 6 EKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEEL 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 949 NDELRLKERQLEQIQLELTKANEKAVQLQKNVEQtAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQA 1028
Cdd:COG4372 86 NEQLQAAQAELAQAQEELESLQEEAEELQEELEE-LQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQE 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1029 KYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLI 1108
Cdd:COG4372 165 ELAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALEL 244
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1109 SEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEK 1188
Cdd:COG4372 245 EEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLEL 324
|
330 340
....*....|....*....|...
gi 2024359610 1189 SKLLSEIETAQADLLKITQENDA 1211
Cdd:COG4372 325 AKKLELALAILLAELADLLQLLL 347
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
699-1131 |
4.84e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 42.25 E-value: 4.84e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 699 KLLEVTEEKEQTLENLKAKLESVEDQHlVEMEDTLNKLQEAEikvKELDV-LQAkCNEQTKLIGSLTQQIRASEEKLLDL 777
Cdd:COG3096 282 ELSERALELRRELFGARRQLAEEQYRL-VEMARELEELSARE---SDLEQdYQA-ASDHLNLVQTALRQQEKIERYQEDL 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 778 AALqkansEGKLEIQklSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLldleknlsavnqvkdsleKELQLL 857
Cdd:COG3096 357 EEL-----TERLEEQ--EEVVEEAAEQLAEAEARLEAAEEEVDSLKSQLADYQQAL------------------DVQQTR 411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 858 KEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKS 937
Cdd:COG3096 412 AIQYQQAVQALEKARALCGLPDLTPENAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAGEVERS 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 938 SGDSSA-QLMKMNDELRLKERQLEQIQLELTKAnEKAVQLQKNVEQTAQKAEQSQ------QETLKTHQEELKKMQDQLT 1010
Cdd:COG3096 492 QAWQTArELLRRYRSQQALAQRLQQLRAQLAEL-EQRLRQQQNAERLLEEFCQRIgqqldaAEELEELLAELEAQLEELE 570
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1011 DmkkQMETSQNQYKDLQAKyeketsemitkhdadikgfkqnlldaEEALKAAQKkndELETQAEELKKQAEQAKSLSSVL 1090
Cdd:COG3096 571 E---QAAEAVEQRSELRQQ--------------------------LEQLRARIK---ELAARAPAWLAAQDALERLREQS 618
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 2024359610 1091 ASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQ 1131
Cdd:COG3096 619 GEALADSQEVTAAMQQLLEREREATVERDELAARKQALESQ 659
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1603-2049 |
4.97e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.06 E-value: 4.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1603 NRERTELQDKCQKLTGEVENMKENLT-----VEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEfLTEKELLV 1677
Cdd:COG4717 87 EEEYAELQEELEELEEELEELEAELEelreeLEKLEKLLQLLPLYQELEALEAELAELPERLEELEERLEE-LRELEEEL 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1678 QEKEKSETKLEEVIKEKMIlyKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEkMELVQEN 1757
Cdd:COG4717 166 EELEAELAELQEELEELLE--QLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENE-LEAAALE 242
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1758 ESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQTdadFSCRLLVSEGKHELLLEEMSNLALKLREIERLQAQ 1837
Cdd:COG4717 243 ERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLG---LLALLFLLLAREKASLGKEAEELQALPALEELEEE 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1838 TFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENK 1917
Cdd:COG4717 320 ELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQE 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1918 KVEELKKEFEALKLAAAQKSQQLAALQEENVKlaEELgrsrdevtshQKLEEERSVLNNQLLEMKKRESTLKKEIdeERA 1997
Cdd:COG4717 400 LKEELEELEEQLEELLGELEELLEALDEEELE--EEL----------EELEEELEELEEELEELREELAELEAEL--EQL 465
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|..
gi 2024359610 1998 SLQKSISDTSALITQKDEELEKLRNEITVLRgenASAKTLQSVVKTLESDKL 2049
Cdd:COG4717 466 EEDGELAELLQELEELKAELRELAEEWAALK---LALELLEEAREEYREERL 514
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
476-746 |
5.04e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.84 E-value: 5.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 476 ARIKELEqsLLFEKTKADKLQRELEDTRVATVSEKSrimelERDLALRVKEVAELRGRLesSKHIDDVDTSLSLLQEISS 555
Cdd:PRK05771 4 VRMKKVL--IVTLKSYKDEVLEALHELGVVHIEDLK-----EELSNERLRKLRSLLTKL--SEALDKLRSYLPKLNPLRE 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 556 LQEKMaaagkehqrEMSSLKEKFESSEEALRKEIKTLSASNERMgKENESLKTKLDHANKE-------NSDVIELWKSKL 628
Cdd:PRK05771 75 EKKKV---------SVKSLEELIKDVEEELEKIEKEIKELEEEI-SELENEIKELEQEIERlepwgnfDLDLSLLLGFKY 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 629 ESAIAS--HQQAMEELKVSFNKGVgAQTAEFAE---------LKTQMEKV-KLDYENEMSNLKLKQENEKSQhlkEIEAL 696
Cdd:PRK05771 145 VSVFVGtvPEDKLEELKLESDVEN-VEYISTDKgyvyvvvvvLKELSDEVeEELKKLGFERLELEEEGTPSE---LIREI 220
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2024359610 697 KAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKEL 746
Cdd:PRK05771 221 KEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELERAEALSKFL 270
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1453-2063 |
5.25e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 41.99 E-value: 5.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1453 TAFTEKINELNLEKESVFSKSLQFEKHNEALLR--EKDELERKYSELLDEKKSLEnafsdmKREQELDFSAKRLLVQENT 1530
Cdd:COG5022 772 KKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSllGSRKEYRSYLACIIKLQKTI------KREKKLRETEEVEFSLKAE 845
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1531 TLKYSIEALEEELKKKNLENQELIACRSdlsdlLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQ 1610
Cdd:COG5022 846 VLIQKFGRSLKAKKRFSLLKKETIYLQS-----AQRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLI 920
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1611 DKCQKLTGEVENMKENLtveKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLE-- 1688
Cdd:COG5022 921 ENLEFKTELIARLKKLL---NNIDLEEGPSIEYVKLPELNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKnf 997
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1689 -----EVIKEKMILYKETEQ----------LASKIEQLKSDFTSLSvSKAELEDVHSCVSVMLDELQHKYEV-------- 1745
Cdd:COG5022 998 kkelaELSKQYGALQESTKQlkelpvevaeLQSASKIISSESTELS-ILKPLQKLKGLLLLENNQLQARYKAlklrrens 1076
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1746 ----TEKEKMElVQENESLHAEWKSLVIINEEILKEKEKLSkeyyKLHEKVVALLEQTDADFSCRLLV-----SEGKHEL 1816
Cdd:COG5022 1077 llddKQLYQLE-STENLLKTINVKDLEVTNRNLVKPANVLQ----FIVAQMIKLNLLQEISKFLSQLVntlepVFQKLSV 1151
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1817 LLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQneLDMLKQ 1896
Cdd:COG5022 1152 LQLELDGLFWEANLEALPSPPPFAALSEKRLYQSALYDEKSKLSSSEVNDLKNELIALFSKIFSGWPRGDKL--KKLISE 1229
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1897 NNLKNeEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELgrsrdevtshQKLEEERSVLNN 1976
Cdd:COG5022 1230 GWVPT-EYSTSLKGFNNLNKKFDTPASMSNEKLLSLLNSIDNLLSSYKLEEEVLPATI----------NSLLQYINVGLF 1298
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1977 QLLEMKKRESTLKKEIDEERASLQKSISDTSALITQKDEELEKL--RNEITVLRGENASA-KTLQSV---VKTLESDKLK 2050
Cdd:COG5022 1299 NALRTKASSLRWKSATEVNYNSEELDDWCREFEISDVDEELEELiqAVKVLQLLKDDLNKlDELLDAcysLNPAEIQNLK 1378
|
650
....*....|...
gi 2024359610 2051 LEEKVKNLEQKLK 2063
Cdd:COG5022 1379 SRYDPADKENNLP 1391
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1772-2120 |
5.34e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.95 E-value: 5.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1772 EEILKEKEKLSKEYYKLHEKVVALlEQTDADFSCRLLVSEGKHELLLEEMSNLALKLrEIERLQAQTFMQKFEA-DKRAE 1850
Cdd:PRK02224 247 EERREELETLEAEIEDLRETIAET-EREREELAEEVRDLRERLEELEEERDDLLAEA-GLDDADAEAVEARREElEDRDE 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1851 EVLQTMEKVTKEKDAiHQEKIETLA-SLENSRQTNEKLQNELDMLkqnnlknEEELTKSKELLNLENKKVEELKKEFEAL 1929
Cdd:PRK02224 325 ELRDRLEECRVAAQA-HNEEAESLReDADDLEERAEELREEAAEL-------ESELEEAREAVEDRREEIEELEEEIEEL 396
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1930 KLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQ-KLEEERSVL--NNQLLEMKKRESTLKKEIDEERASlqkSISDT 2006
Cdd:PRK02224 397 RERFGDAPVDLGNAEDFLEELREERDELREREAELEaTLRTARERVeeAEALLEAGKCPECGQPVEGSPHVE---TIEED 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 2007 SALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLEsdklKLEEKVKNLEQKL-------KAKSEQPLTVTSPSGDI 2079
Cdd:PRK02224 474 RERVEELEAELEDLEEEVEEVEERLERAEDLVEAEDRIE----RLEERREDLEELIaerretiEEKRERAEELRERAAEL 549
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 2024359610 2080 AANL-LQDESAEDKQQEIDFLNSVIVDLQRRNEELNLKIQRM 2120
Cdd:PRK02224 550 EAEAeEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESL 591
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1647-2061 |
5.46e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.68 E-value: 5.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1647 ELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAele 1726
Cdd:COG4717 50 RLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ--- 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1727 dvhscvsvmLDELQHKYEVTEKEKMELVQENESLHAEWKSLviinEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSCR 1806
Cdd:COG4717 127 ---------LLPLYQELEALEAELAELPERLEELEERLEEL----RELEEELEELEAELAELQEELEELLEQLSLATEEE 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1807 LLVSEGKHELLLEEMSNL--ALKLREIERLQAQTFMQKFEADKRAEEVLQTMEK-------------------------- 1858
Cdd:COG4717 194 LQDLAEELEELQQRLAELeeELEEAQEELEELEEELEQLENELEAAALEERLKEarlllliaaallallglggsllslil 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1859 -------------------VTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKV 1919
Cdd:COG4717 274 tiagvlflvlgllallfllLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELL 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1920 EELKKEFEALKLAAAQKSQQlAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKRESTLKKEIDEERasL 1999
Cdd:COG4717 354 REAEELEEELQLEELEQEIA-ALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEE--L 430
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024359610 2000 QKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKtLESDKLKLEEKVKNLEQK 2061
Cdd:COG4717 431 EEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAE-LLQELEELKAELRELAEE 491
|
|
| Surf_Exclu_PgrA |
TIGR04320 |
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface ... |
967-1086 |
5.60e-03 |
|
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface proteins of a number of Firmutes. Many members have LPXTG C-terminal anchoring motifs and a substantial number have the KxYKxGKxW putative sorting signal at the N-terminus. The tetracycline resistance plasmid pCF10 in Enterococcus faecalis promotes conjugal plasmid transfer in response to sex pheromones, but PgrA/Sec10 encoded by that plasmid, a member of this family, specifically inhibits the ability of cells to receive homologous plasmids. The phenomenon is called surface exclusion.
Pssm-ID: 275124 [Multi-domain] Cd Length: 356 Bit Score: 41.25 E-value: 5.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 967 TKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMkkqmetsQNQYKDLQAKYEKETsemitkhdadik 1046
Cdd:TIGR04320 256 LAALQAKLATAQADLAAAQTALNTAQAALTSAQTAYAAAQAALATA-------QKELANAQAQALQTA------------ 316
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 2024359610 1047 gfKQNLLDAEEALKAAQKKNDELETQAEELK-KQAEQAKSL 1086
Cdd:TIGR04320 317 --QNNLATAQAALANAEARLAKAKEALANLNaDLAKKQAAL 355
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
837-1204 |
5.82e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 41.81 E-value: 5.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 837 EKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRamqeTINKLNQKEEQfAL-----MSSELEQLKSNLTVMETKLK 911
Cdd:PLN02939 106 EAIAAIDNEQQTNSKDGEQLSDFQLEDLVGMIQNAEK----NILLLNQARLQ-ALedlekILTEKEALQGKINILEMRLS 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 912 EREEREQQLTEAKVKLEndiaeimkssgdssaqlmkmndelrLKERQLEQIQLELTK--ANEKAVQLQKNVEQTAQKAEQ 989
Cdd:PLN02939 181 ETDARIKLAAQEKIHVE-------------------------ILEEQLEKLRNELLIrgATEGLCVHSLSKELDVLKEEN 235
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 990 SqqeTLKTHQEELKKMQDQLTDMKKQMetsqnqykdlqAKYEKETSEMitkhDADIKGFKQNLLDAEEAL--------KA 1061
Cdd:PLN02939 236 M---LLKDDIQFLKAELIEVAETEERV-----------FKLEKERSLL----DASLRELESKFIVAQEDVsklsplqyDC 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1062 AQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRD-----LISEKETLAQERntLKLEKESLLSQHLEME 1136
Cdd:PLN02939 298 WWEKVENLQDLLDRATNQVEKAALVLDQNQDLRDKVDKLEASLKEanvskFSSYKVELLQQK--LKLLEERLQASDHEIH 375
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359610 1137 SKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSrqESTEKVALISEKSKLLSEIETAQADLLK 1204
Cdd:PLN02939 376 SYIQLYQESIKEFQDTLSKLKEESKKRSLEHPADDMPS--EFWSRILLLIDGWLLEKKISNNDAKLLR 441
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1880-2039 |
5.90e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 41.77 E-value: 5.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1880 SRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKlaaaqksQQLAALQEENVKLAEELGRSRD 1959
Cdd:COG2433 383 EELIEKELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELE-------AELEEKDERIERLERELSEARS 455
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1960 EVtsHQKLEEERSVLNnqlleMKKRESTLKKEIDEERASLQKSISdtsalitqKDEELEKLRNEitVLRGENASAKTLQS 2039
Cdd:COG2433 456 EE--RREIRKDREISR-----LDREIERLERELEEERERIEELKR--------KLERLKELWKL--EHSGELVPVKVVEK 518
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
876-1062 |
6.16e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.68 E-value: 6.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 876 QETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLM--KMNDELR 953
Cdd:COG1579 13 QELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGnvRNNKEYE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 954 LKERQLEQIQLELTKANEKAVQLQKNVEQtaqkaeqsqqetlktHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKE 1033
Cdd:COG1579 93 ALQKEIESLKRRISDLEDEILELMERIEE---------------LEEELAELEAELAELEAELEEKKAELDEELAELEAE 157
|
170 180
....*....|....*....|....*....
gi 2024359610 1034 TSEMITKHDADIKGFKQNLLDAEEALKAA 1062
Cdd:COG1579 158 LEELEAEREELAAKIPPELLALYERIRKR 186
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
339-851 |
6.82e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 41.56 E-value: 6.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 339 ETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLramv 418
Cdd:PRK02224 241 EVLEEHEERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARR---- 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 419 EAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLE-RKRQISEDPENTQTKLEHARIKELEQsllfeKTKADKLQR 497
Cdd:PRK02224 317 EELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEeRAEELREEAAELESELEEAREAVEDR-----REEIEELEE 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 498 ELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLEsskhidDVDTSLSLLQEISSLQEKMAAAGK----EHQREMSS 573
Cdd:PRK02224 392 EIEELRERFGDAPVDLGNAEDFLEELREERDELREREA------ELEATLRTARERVEEAEALLEAGKcpecGQPVEGSP 465
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 574 LKEKFESSEEalrkEIKTLSASNERMGKENESLKTKLDHAN--KENSDVIELWKSKLEsaiashqqAMEELKVSFNKGVG 651
Cdd:PRK02224 466 HVETIEEDRE----RVEELEAELEDLEEEVEEVEERLERAEdlVEAEDRIERLEERRE--------DLEELIAERRETIE 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 652 AQTAEFAELKTQMEKVKLDYEnEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQtLENLKAKLESVEDqhlveMED 731
Cdd:PRK02224 534 EKRERAEELRERAAELEAEAE-EKREAAAEAEEEAEEAREEVAELNSKLAELKERIES-LERIRTLLAAIAD-----AED 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 732 TLNKLQEaeikvkELDVLQAKCNEQTKLIGSLTQQIRASEEKlLDLAALQKANSEGkleiQKLSEQLQAAEKQIQNLETE 811
Cdd:PRK02224 607 EIERLRE------KREALAELNDERRERLAEKRERKRELEAE-FDEARIEEAREDK----ERAEEYLEQVEEKLDELREE 675
|
490 500 510 520
....*....|....*....|....*....|....*....|
gi 2024359610 812 KVGGSSKVSNLTKELqgkeQKLLDLEKNLSAVNQVKDSLE 851
Cdd:PRK02224 676 RDDLQAEIGAVENEL----EELEELRERREALENRVEALE 711
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1024-1327 |
7.41e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 41.44 E-value: 7.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1024 KDLQAKYEKETSemITKHDADIKGFKQNLLDAEEALKAAQKKNDELEtqaeELKKQAEQAKSLssvLASARKEIELMSDk 1103
Cdd:PRK11281 39 ADVQAQLDALNK--QKLLEAEDKLVQQDLEQTLALLDKIDRQKEETE----QLKQQLAQAPAK---LRQAQAELEALKD- 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1104 mrdliSEKETLAQERNTLKLEkesllsqhlEMESKILLVQQDREELwtkNEELNSENKKILKQkeaaeaksrQESTEKV- 1182
Cdd:PRK11281 109 -----DNDEETRETLSTLSLR---------QLESRLAQTLDQLQNA---QNDLAEYNSQLVSL---------QTQPERAq 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1183 ALISEKSKLLSEIETaqadLLKITQEND-ALRSSESTLLQ------------QLKELQANKDAVDVACQKHIKEREE--- 1246
Cdd:PRK11281 163 AALYANSQRLQQIRN----LLKGGKVGGkALRPSQRVLLQaeqallnaqndlQRKSLEGNTQLQDLLQKQRDYLTARiqr 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1247 LEHYQKLLEE--NDRVIKDKDDVIQRLQSSyDDLARNQ--RELLQEVSILTAERD---SAQEKDLDLKSTHIALKNEIDC 1319
Cdd:PRK11281 239 LEHQLQLLQEaiNSKRLTLSEKTVQEAQSQ-DEAARIQanPLVAQELEINLQLSQrllKATEKLNTLTQQNLRVKNWLDR 317
|
....*...
gi 2024359610 1320 LLQTNRSL 1327
Cdd:PRK11281 318 LTQSERNI 325
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
780-936 |
7.55e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 41.30 E-value: 7.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 780 LQKANSEGKlEIQKlsEQLQAAEKQIQNL--ETEKvggssKVSNLTKELQGKEQKLLDLEKNlsavnqvkdsLEKELQLL 857
Cdd:PRK12704 44 LEEAKKEAE-AIKK--EALLEAKEEIHKLrnEFEK-----ELRERRNELQKLEKRLLQKEEN----------LDRKLELL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 858 KEKftsavdgaenaQRAMQETINKLNQKEEQFALMSSELEQLKSN-LTVME--TKLKEREEREQQLTEAKVKLENDIAEI 934
Cdd:PRK12704 106 EKR-----------EEELEKKEKELEQKQQELEKKEEELEELIEEqLQELEriSGLTAEEAKEILLEKVEEEARHEAAVL 174
|
..
gi 2024359610 935 MK 936
Cdd:PRK12704 175 IK 176
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1075-1311 |
8.46e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.07 E-value: 8.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1075 ELKKQAEQAKSLSSVLASARKeIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEmeSKILLVQQDREELWTKNE 1154
Cdd:PRK05771 34 EDLKEELSNERLRKLRSLLTK-LSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVE--EELEKIEKEIKELEEEIS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1155 ELNSENKKILKQKEAAE----------AKSRQESTE-KVALISEKSKLLSEIETAQADLLKITQEND-------ALRSSE 1216
Cdd:PRK05771 111 ELENEIKELEQEIERLEpwgnfdldlsLLLGFKYVSvFVGTVPEDKLEELKLESDVENVEYISTDKGyvyvvvvVLKELS 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1217 STLLQQLKELQAnkDAVDVACQKHIKEReeLEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELlqevsiLTAER 1296
Cdd:PRK05771 191 DEVEEELKKLGF--ERLELEEEGTPSEL--IREIKEELEEIEKERESLLEELKELAKKYLEELLALYEY------LEIEL 260
|
250
....*....|....*
gi 2024359610 1297 DSAQEKDLDLKSTHI 1311
Cdd:PRK05771 261 ERAEALSKFLKTDKT 275
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
570-1568 |
9.61e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 41.19 E-value: 9.61e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 570 EMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANK--------ENSDVIELWKSKLESAIASHQQAMEE 641
Cdd:TIGR01612 1112 EINKIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLEDvadkaisnDDPEEIEKKIENIVTKIDKKKNIYDE 1191
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 642 LKVSFNkgvgaQTAEFAELKTQMEKVK---LDYENEMSNLKLKQ---ENEKSQHLkeIEALKAKLlevteekeQTLENLK 715
Cdd:TIGR01612 1192 IKKLLN-----EIAEIEKDKTSLEEVKginLSYGKNLGKLFLEKideEKKKSEHM--IKAMEAYI--------EDLDEIK 1256
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 716 AKLESVEDQHLVEMEDT--LNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQK 793
Cdd:TIGR01612 1257 EKSPEIENEMGIEMDIKaeMETFNISHDDDKDHHIISKKHDENISDIREKSLKIIEDFSEESDINDIKKELQKNLLDAQK 1336
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 794 LSEQLQAAEKQIQNL-ETEKVGGSSKVSNLTKELQGKEQKL-----LDLEKNLSAVNQVKDSLEkeLQLLKEKFTSAVDG 867
Cdd:TIGR01612 1337 HNSDINLYLNEIANIyNILKLNKIKKIIDEVKEYTKEIEENnknikDELDKSEKLIKKIKDDIN--LEECKSKIESTLDD 1414
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 868 AEnaqraMQETINKLnqKEEQFALMSSEleqlkSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMK 947
Cdd:TIGR01612 1415 KD-----IDECIKKI--KELKNHILSEE-----SNIDTYFKNADENNENVLLLFKNIEMADNKSQHILKIKKDNATNDHD 1482
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 948 MN-DELRLKERQLEQIQlelTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQltdMKKQMETSQNQYKDL 1026
Cdd:TIGR01612 1483 FNiNELKEHIDKSKGCK---DEADKNAKAIEKNKELFEQYKKDVTELLNKYSALAIKNKFAK---TKKDSEIIIKEIKDA 1556
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1027 QAKY--EKETSEMITKhdaDIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKM 1104
Cdd:TIGR01612 1557 HKKFilEAEKSEQKIK---EIKKEKFRIEDDAAKNDKSNKAAIDIQLSLENFENKFLKISDIKKKINDCLKETESIEKKI 1633
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1105 RDL-ISEKETLAQER----NTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKK-----ILKQKEAAEAKS 1174
Cdd:TIGR01612 1634 SSFsIDSQDTELKENgdnlNSLQEFLESLKDQKKNIEDKKKELDELDSEIEKIEIDVDQHKKNyeigiIEKIKEIAIANK 1713
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1175 RQESTEKVALISEKSKLLSEIETAqaDLLKI----------TQENDALR----------------SSESTLLQQLKELQA 1228
Cdd:TIGR01612 1714 EEIESIKELIEPTIENLISSFNTN--DLEGIdpnekleeynTEIGDIYEefielyniiagcletvSKEPITYDEIKNTRI 1791
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1229 NkdavdvACQKHIKEREELEHYQKLLE-----ENDRVI----KDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSA 1299
Cdd:TIGR01612 1792 N------AQNEFLKIIEIEKKSKSYLDdieakEFDRIInhfkKKLDHVNDKFTKEYSKINEGFDDISKSIENVKNSTDEN 1865
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1300 QEKDLdLKSTHIALKNEIDcllQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKD---EMQTELETEREKLEKM 1376
Cdd:TIGR01612 1866 LLFDI-LNKTKDAYAGIIG---KKYYSYKDEAEKIFINISKLANSINIQIQNNSGIDLFDNiniAILSSLDSEKEDTLKF 1941
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1377 TKDNMDLKASLSSLSN----FLEEMKSSREASNSEKihllQEALFASEQRLLAEREELVNENKAVTEKlTKATADAVLAE 1452
Cdd:TIGR01612 1942 IPSPEKEPEIYTKIRDsydtLLDIFKKSQDLHKKEQ----DTLNIIFENQQLYEKIQASNELKDTLSD-LKYKKEKILND 2016
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359610 1453 TAFT-EKINELN------------LE---KESVFSKSLQFEKHNEALLREKD--ELERKYSELLDEKKSLENAFSDMKRE 1514
Cdd:TIGR01612 2017 VKLLlHKFDELNklscdsqnydtiLElskQDKIKEKIDNYEKEKEKFGIDFDvkAMEEKFDNDIKDIEKFENNYKHSEKD 2096
|
1050 1060 1070 1080 1090
....*....|....*....|....*....|....*....|....*....|....
gi 2024359610 1515 QELDFSAKRLLVQENTTLKYSIEALEEELKKknLENQelIACRSDLSDLLKEAQ 1568
Cdd:TIGR01612 2097 NHDFSEEKDNIIQSKKKLKELTEAFNTEIKI--IEDK--IIEKNDLIDKLIEMR 2146
|
|
| |
