|
Name |
Accession |
Description |
Interval |
E-value |
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
217-281 |
8.14e-34 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 124.82 E-value: 8.14e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024359618 217 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPRYGLFAPVHKV 281
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
61-125 |
5.26e-31 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 116.73 E-value: 5.26e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024359618 61 VGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLRGIFTRPSKL 125
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
217-282 |
2.62e-27 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 106.52 E-value: 2.62e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359618 217 IGDRVLVGGT-KAGVVRFLGETDFAKGEWCGVELDEPL-GKNDGAVAGTRYFQCQPRYGLFAPVHKVT 282
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPLrGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
61-126 |
2.89e-27 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 106.13 E-value: 2.89e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359618 61 VGERVWVNGN-KPGFIQFLGETQFAPGQWAGIVLDEP-IGKNDGSVAGVRYFQCEPLRGIFTRPSKLS 126
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPlRGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
824-1677 |
9.98e-23 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 106.68 E-value: 9.98e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 824 EQKLLDLEKNLSAVNQVKDSLEKELQLLK------EKFTSAVDGAENAQRAMQVMEtkLKEREEREQQLTEAKVKLENDI 897
Cdd:TIGR02168 178 ERKLERTRENLDRLEDILNELERQLKSLErqaekaERYKELKAELRELELALLVLR--LEELREELEELQEELKEAEEEL 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 898 AEImkssgdssaqlmkmNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKaeqsqQETLKTHQEELKKMQDQLTD 977
Cdd:TIGR02168 256 EEL--------------TAELQELEEKLEELRLEVSELEEEIEELQKELYALANE-----ISRLEQQKQILRERLANLER 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 978 MKKQMETSQNQYKDLQAKYEKETSEMitkhDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKS----LS 1053
Cdd:TIGR02168 317 QLEELEAQLEELESKLDELAEELAEL----EEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSkvaqLE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1054 SVLASARKEIELMSDKMRDLISEKETLAQERNTlkLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQK 1133
Cdd:TIGR02168 393 LQIASLNNEIERLEARLERLEDRRERLQQEIEE--LLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREEL 470
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1134 EAAEAKSRQESTEKVALISEKS---KLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIker 1210
Cdd:TIGR02168 471 EEAEQALDAAERELAQLQARLDsleRLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRL--- 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1211 eelehyQKLLEENDRVIKD-----KDDVIQRL------QSSYDDLARNQRELLQEVsiltaerDSAQEKDLDLKSTHIAL 1279
Cdd:TIGR02168 548 ------QAVVVENLNAAKKaiaflKQNELGRVtflpldSIKGTEIQGNDREILKNI-------EGFLGVAKDLVKFDPKL 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1280 KNEIDCLLQTNR---SLQSEKEMLLKSR-EELCVSLANT-------------ANENQALKLRKdemqtELETEREKLEKM 1342
Cdd:TIGR02168 615 RKALSYLLGGVLvvdDLDNALELAKKLRpGYRIVTLDGDlvrpggvitggsaKTNSSILERRR-----EIEELEEKIEEL 689
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1343 TKDNMDLKASLSSLSNFLEEMKssreasnsEKIHLLQEALFASEQRLLAEREELVNENKAVtEKLTKATADAVLAETAFT 1422
Cdd:TIGR02168 690 EEKIAELEKALAELRKELEELE--------EELEQLRKELEELSRQISALRKDLARLEAEV-EQLEERIAQLSKELTELE 760
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1423 EKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSI 1502
Cdd:TIGR02168 761 AEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRL 840
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1503 EALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKL 1582
Cdd:TIGR02168 841 EDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEEL 920
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1583 TGEVENMKENLTV------EKKARILDKESFLLERM-ELQNNIGF----LEKEVEEMREKNKEFLTEKELLVQEKEKSET 1651
Cdd:TIGR02168 921 REKLAQLELRLEGlevridNLQERLSEEYSLTLEEAeALENKIEDdeeeARRRLKRLENKIKELGPVNLAAIEEYEELKE 1000
|
890 900
....*....|....*....|....*.
gi 2024359618 1652 KLEEVIKEKMILYKETEQLASKIEQL 1677
Cdd:TIGR02168 1001 RYDFLTAQKEDLTEAKETLEEAIEEI 1026
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
679-1495 |
7.46e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 100.52 E-value: 7.46e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 679 KLKQENEKSQHLKEI-EALKAKLLEVTEEKeqtLENLKAKLESVEDQhLVEMEDTLNKLQEaeikvkELDVLQAKCNEQT 757
Cdd:TIGR02168 204 SLERQAEKAERYKELkAELRELELALLVLR---LEELREELEELQEE-LKEAEEELEELTA------ELQELEEKLEELR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 758 KLIGSLTQQIRASEEKLLDLAAlqkansegklEIQKLSEQLQAAEKQIQNLETEKVSnLTKELQGKEQKLLDLEKNLSAV 837
Cdd:TIGR02168 274 LEVSELEEEIEELQKELYALAN----------EISRLEQQKQILRERLANLERQLEE-LEAQLEELESKLDELAEELAEL 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 838 NQVKDSLEKELQLLKEKFtsavdgaENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDE 917
Cdd:TIGR02168 343 EEKLEELKEELESLEAEL-------EELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 918 LRLKERQLEQIQLELTKANEKAVQLQ----KNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQY---K 990
Cdd:TIGR02168 416 RERLQQEIEELLKKLEEAELKELQAEleelEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLdslE 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 991 DLQAKYEKETSEM--ITKHDADIKGFK-------------------------QNLL--DAEEALKA--AQKKND------ 1033
Cdd:TIGR02168 496 RLQENLEGFSEGVkaLLKNQSGLSGILgvlselisvdegyeaaieaalggrlQAVVveNLNAAKKAiaFLKQNElgrvtf 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1034 ---------ELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKE------------ 1092
Cdd:TIGR02168 576 lpldsikgtEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPgyrivtldgdlv 655
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1093 ----SLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADL 1168
Cdd:TIGR02168 656 rpggVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDL 735
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1169 LKITQENDALRSSESTLLQQLKELQANKDAvdvacqkhikEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQ 1248
Cdd:TIGR02168 736 ARLEAEVEQLEERIAQLSKELTELEAEIEE----------LEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREAL 805
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1249 RELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEM 1328
Cdd:TIGR02168 806 DELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASL 885
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1329 QTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHL------LQEALFASEQRLLAEREELVNENKA 1402
Cdd:TIGR02168 886 EEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLevridnLQERLSEEYSLTLEEAEALENKIED 965
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1403 VTEKLTKATADAvlaetafTEKINEL---NLEKESvfskslQFEKHNEallrEKDELERKYSELLDEKKSLENAFSDMKR 1479
Cdd:TIGR02168 966 DEEEARRRLKRL-------ENKIKELgpvNLAAIE------EYEELKE----RYDFLTAQKEDLTEAKETLEEAIEEIDR 1028
|
890
....*....|....*.
gi 2024359618 1480 EQELDFSAKRLLVQEN 1495
Cdd:TIGR02168 1029 EARERFKDTFDQVNEN 1044
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
705-1546 |
5.26e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 97.82 E-value: 5.26e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 705 EEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQeaeikvkeldvLQAKCNEQTKligSLTQQIRASEEKLL--DLAALQK 782
Cdd:TIGR02168 175 KETERKLERTRENLDRLEDI-LNELERQLKSLE-----------RQAEKAERYK---ELKAELRELELALLvlRLEELRE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 783 ANSEGKLEIQKLSEQLQAAEKQIQNLEtEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFtsavdga 862
Cdd:TIGR02168 240 ELEELQEELKEAEEELEELTAELQELE-EKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERL------- 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 863 ENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQL 942
Cdd:TIGR02168 312 ANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQL 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 943 QKNVEQTaqkaeQSQQETLKTHQEELKKMQDQLTDMKKQMEtsqnqyKDLQAKYEKETSEMITKHDADIKGFKQNLLDAE 1022
Cdd:TIGR02168 392 ELQIASL-----NNEIERLEARLERLEDRRERLQQEIEELL------KKLEEAELKELQAELEELEEELEELQEELERLE 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1023 EALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTL----------KLEKE 1092
Cdd:TIGR02168 461 EALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLselisvdegyEAAIE 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1093 SLLSQHLEM------ESKILLVQQDREELWTK----------NEELNSENKKILKQKE--AAEAKSRQESTEK----VAL 1150
Cdd:TIGR02168 541 AALGGRLQAvvvenlNAAKKAIAFLKQNELGRvtflpldsikGTEIQGNDREILKNIEgfLGVAKDLVKFDPKlrkaLSY 620
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1151 ISEKSKLLSEIETAQADLLK-------ITQENDALRSS----------ESTLLQQLKELQANKDAVDVACQKHIKEREEL 1213
Cdd:TIGR02168 621 LLGGVLVVDDLDNALELAKKlrpgyriVTLDGDLVRPGgvitggsaktNSSILERRREIEELEEKIEELEEKIAELEKAL 700
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1214 EHYQKLLEENDRVIKDKDDVIQRLQssyddlaRNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSL 1293
Cdd:TIGR02168 701 AELRKELEELEEELEQLRKELEELS-------RQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEA 773
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1294 QSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKmtkdnmdlkaslsslsnfleemKSSREASNSE 1373
Cdd:TIGR02168 774 EEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAAN----------------------LRERLESLER 831
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1374 KIHLLQEALFASEQRLLAEREELvnenkavtEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREK 1453
Cdd:TIGR02168 832 RIAATERRLEDLEEQIEELSEDI--------ESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEEL 903
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1454 DELERKYSELLDEKKSLENAFSDMKREQEldfsakRLLVQENTTlkysIEALEEELkkkNLENQELIACRSDLSDLLKEA 1533
Cdd:TIGR02168 904 RELESKRSELRRELEELREKLAQLELRLE------GLEVRIDNL----QERLSEEY---SLTLEEAEALENKIEDDEEEA 970
|
890
....*....|...
gi 2024359618 1534 QDARRTLENELAA 1546
Cdd:TIGR02168 971 RRRLKRLENKIKE 983
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
565-1363 |
4.14e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 95.12 E-value: 4.14e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 565 KEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELwKSKLESAIASHQQAMEELKV 644
Cdd:TIGR02168 238 REELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANE-ISRLEQQKQILRERLANLER 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 645 SFNKGvgaqTAEFAELKTQMEKVKLDYEnemsnlklKQENEKSQHLKEIEALKAKLlevtEEKEQTLENLKAKLESVEDQ 724
Cdd:TIGR02168 317 QLEEL----EAQLEELESKLDELAEELA--------ELEEKLEELKEELESLEAEL----EELEAELEELESRLEELEEQ 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 725 HLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKL--LDLAALQKANSEGKLEIQKLSEQLQAAE 802
Cdd:TIGR02168 381 LETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLeeAELKELQAELEELEEELEELQEELERLE 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 803 kqiqnletEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKeLQLLKEKFTSAVDGAENAQRAM----QVMETKLKE 878
Cdd:TIGR02168 461 --------EALEELREELEEAEQALDAAERELAQLQARLDSLER-LQENLEGFSEGVKALLKNQSGLsgilGVLSELISV 531
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 879 REEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELR--------LKERQLEQIQLELTKANEKAVQLQKNVEQTA 950
Cdd:TIGR02168 532 DEGYEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRvtflpldsIKGTEIQGNDREILKNIEGFLGVAKDLVKFD 611
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 951 QKAEQSQQ---------ETLKTHQEELKKMQDQLTDMKKQMET-----SQNQYKDLQAKYEKETSEMITKHDADIKGFKQ 1016
Cdd:TIGR02168 612 PKLRKALSyllggvlvvDDLDNALELAKKLRPGYRIVTLDGDLvrpggVITGGSAKTNSSILERRREIEELEEKIEELEE 691
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1017 NLLDAEEALKAAQKKNDELETQAEELKKQAEQA----KSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKE 1092
Cdd:TIGR02168 692 KIAELEKALAELRKELEELEEELEQLRKELEELsrqiSALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLE 771
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1093 SLLSQHLEMESKILLVQQDREELwtkneelNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKIT 1172
Cdd:TIGR02168 772 EAEEELAEAEAEIEELEAQIEQL-------KEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLE 844
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1173 QENDALRSSESTLLQQLKELQANKDavdvacqkhiKEREELEHYQKLLEENDRVIKdkddviqRLQSSYDDLARNQRELL 1252
Cdd:TIGR02168 845 EQIEELSEDIESLAAEIEELEELIE----------ELESELEALLNERASLEEALA-------LLRSELEELSEELRELE 907
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1253 QEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQS-EKEMLLKSREELCVSLANTANENQALKLRKDEM--- 1328
Cdd:TIGR02168 908 SKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSlTLEEAEALENKIEDDEEEARRRLKRLENKIKELgpv 987
|
810 820 830
....*....|....*....|....*....|....*....
gi 2024359618 1329 ----QTELETEREKLEKMTKDNMDLKASLSSLSNFLEEM 1363
Cdd:TIGR02168 988 nlaaIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEI 1026
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
403-1247 |
7.17e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 94.35 E-value: 7.17e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 403 HVLEMEAKMDQLRAMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESitkgdlERKRQISEDPENTQtklehARIKELE 482
Cdd:TIGR02168 233 RLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELE------EEIEELQKELYALA-----NEISRLE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 483 QSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLESSKhiDDVDTSLSLLQEISSLQEKMAA 562
Cdd:TIGR02168 302 QQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLE--AELEELEAELEELESRLEELEE 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 563 AGKEHQREMSSLKEKFESSE---EALRKEIKTLSASNERMGKENESLKTKLDHANKE----NSDVIELWKSKLESAIASH 635
Cdd:TIGR02168 380 QLETLRSKVAQLELQIASLNneiERLEARLERLEDRRERLQQEIEELLKKLEEAELKelqaELEELEEELEELQEELERL 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 636 QQAMEELKVSFNKGVGAQTA---EFAELKTQMEKVKLDYENEMSNLKLKQENEKSQH-LKEIEALKAKLLEVTEEKEQTL 711
Cdd:TIGR02168 460 EEALEELREELEEAEQALDAaerELAQLQARLDSLERLQENLEGFSEGVKALLKNQSgLSGILGVLSELISVDEGYEAAI 539
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 712 EnlkAKLESVEDQHLVEMEDTLNKLQEA--EIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKL 789
Cdd:TIGR02168 540 E---AALGGRLQAVVVENLNAAKKAIAFlkQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRK 616
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 790 EIQKLSEQL-------QAAEKQIQNLETEKVSNLTKELQGKEQKLL--DLEKNLSAVNQVK--DSLEKELQLLKEKFTSA 858
Cdd:TIGR02168 617 ALSYLLGGVlvvddldNALELAKKLRPGYRIVTLDGDLVRPGGVITggSAKTNSSILERRReiEELEEKIEELEEKIAEL 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 859 vdgaenaqramqvmETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEK 938
Cdd:TIGR02168 697 --------------EKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAE 762
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 939 AVQLQKNVEQTaqkaeqsqQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKEtsemitkhdadikgfKQNL 1018
Cdd:TIGR02168 763 IEELEERLEEA--------EEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLL---------------NEEA 819
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1019 LDAEEALKAAQKKNDELETQAEELKKQAEQAK----SLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESL 1094
Cdd:TIGR02168 820 ANLRERLESLERRIAATERRLEDLEEQIEELSedieSLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEEL 899
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1095 LSQHLEMESKILLVQQDREELWTKNEELNsENKKILKQKEA--AEAKSRQESTEKVALISEKSKLLSEIETAQADLLKIT 1172
Cdd:TIGR02168 900 SEELRELESKRSELRRELEELREKLAQLE-LRLEGLEVRIDnlQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLE 978
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359618 1173 QENDALRSSESTLLQQLKELQANKDAVDvacqkhiKEREELEHYQKLLEEndrVIKDKDDVI-QRLQSSYDDLARN 1247
Cdd:TIGR02168 979 NKIKELGPVNLAAIEEYEELKERYDFLT-------AQKEDLTEAKETLEE---AIEEIDREArERFKDTFDQVNEN 1044
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1321-2037 |
3.60e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 92.04 E-value: 3.60e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1321 LKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSnfleemkssREASNSEKIHLLQEALFASEQRLLA--------E 1392
Cdd:TIGR02168 170 YKERRKETERKLERTRENLDRLEDILNELERQLKSLE---------RQAEKAERYKELKAELRELELALLVlrleelreE 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1393 REELVNENKAVTEKLTKATADAVLAEtaftEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLEN 1472
Cdd:TIGR02168 241 LEELQEELKEAEEELEELTAELQELE----EKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLER 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1473 AFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQ 1552
Cdd:TIGR02168 317 QLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIA 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1553 VLSSSFNTCSSDIEILNRERTELQdkcQKLTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKN 1632
Cdd:TIGR02168 397 SLNNEIERLEARLERLEDRRERLQ---QEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEA 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1633 KEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVT 1712
Cdd:TIGR02168 474 EQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVVVE 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1713 EKEK----MELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQTDADFS-------CRLLV------ 1775
Cdd:TIGR02168 554 NLNAakkaIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRkalsyllGGVLVvddldn 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1776 -------------------------------SEGKHELLLE---EMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQT 1821
Cdd:TIGR02168 634 alelakklrpgyrivtldgdlvrpggvitggSAKTNSSILErrrEIEELEEKIEELEEKIAELEKALAELRKELEELEEE 713
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1822 MEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQ 1901
Cdd:TIGR02168 714 LEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQ 793
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1902 KSQQLAALQEENVKLAEELGRSRDEVtshQKLEEERSVLNNQLLEMKKSLpsNTLREStlKKEIDEERASLQKSISDTSA 1981
Cdd:TIGR02168 794 LKEELKALREALDELRAELTLLNEEA---ANLRERLESLERRIAATERRL--EDLEEQ--IEELSEDIESLAAEIEELEE 866
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1982 LITQKDEELEKLRNEITVLRGENASAK----TLQSVVKTLESDKLKLEEKVKNLEQKLKA 2037
Cdd:TIGR02168 867 LIEELESELEALLNERASLEEALALLRseleELSEELRELESKRSELRRELEELREKLAQ 926
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
917-1811 |
1.86e-17 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 89.36 E-value: 1.86e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 917 ELRLKERQLEQIQLELTKANEKAVQLQKNVEqtaqKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKY 996
Cdd:TIGR02169 178 ELEEVEENIERLDLIIDEKRQQLERLRRERE----KAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEEL 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 997 EKETSEmitkhdadikgfkqnlldAEEALKAAQKKNDELETQAEELKKQAE-QAKSLSSVLASARKEIELMSDKMRDLIS 1075
Cdd:TIGR02169 254 EKLTEE------------------ISELEKRLEEIEQLLEELNKKIKDLGEeEQLRVKEKIGELEAEIASLERSIAEKER 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1076 EKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKS 1155
Cdd:TIGR02169 316 ELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1156 KLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELEhyqKLLEENDRVIKDKDDVIQ 1235
Cdd:TIGR02169 396 KLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQE---WKLEQLAADLSKYEQELY 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1236 RLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSRE-ELCVSLANT 1314
Cdd:TIGR02169 473 DLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEvAAGNRLNNV 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1315 ANENQA--------LKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASE 1386
Cdd:TIGR02169 553 VVEDDAvakeaielLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDIEAA 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1387 QRLLAERE------ELVNENKAVTEKLTKATADAVLAeTAFTEKINELNLEKESVfskslqfEKHNEALLREKDELERKY 1460
Cdd:TIGR02169 633 RRLMGKYRmvtlegELFEKSGAMTGGSRAPRGGILFS-RSEPAELQRLRERLEGL-------KRELSSLQSELRRIENRL 704
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1461 SELLDEKKSLENAFSDMKREQELdfsakrlLVQENTTLKYSIEALEEELKKKNlenQELIACRSDLSDLLKEAQDARRTL 1540
Cdd:TIGR02169 705 DELSQELSDASRKIGEIEKEIEQ-------LEQEEEKLKERLEELEEDLSSLE---QEIENVKSELKELEARIEELEEDL 774
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1541 ENELAAVSHAKQVLSSSFntcssdIEILNRERTELQDKCQKLTGEVENMKenltvekkaRILDKESFLLErmelqnnigF 1620
Cdd:TIGR02169 775 HKLEEALNDLEARLSHSR------IPEIQAELSKLEEEVSRIEARLREIE---------QKLNRLTLEKE---------Y 830
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1621 LEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSV 1700
Cdd:TIGR02169 831 LEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEA 910
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1701 MLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINEEIL------KEKEKLSKEYYKLhEKVVALLEQTDADFSCRLL 1774
Cdd:TIGR02169 911 QIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELsledvqAELQRVEEEIRAL-EPVNMLAIQEYEEVLKRLD 989
|
890 900 910
....*....|....*....|....*....|....*..
gi 2024359618 1775 VSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEA 1811
Cdd:TIGR02169 990 ELKEKRAKLEEERKAILERIEEYEKKKREVFMEAFEA 1026
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1034-1888 |
4.40e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 88.19 E-value: 4.40e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1034 ELETQAEELKKQAEQA---KSLSSVLASARKEIELMS-----DKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKI 1105
Cdd:TIGR02168 197 ELERQLKSLERQAEKAeryKELKAELRELELALLVLRleelrEELEELQEELKEAEEELEELTAELQELEEKLEELRLEV 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1106 LLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQestekvalisekskLLSEIETAQADLLKITQENDALRSSESTL 1185
Cdd:TIGR02168 277 SELEEEIEELQKELYALANEISRLEQQKQILRERLAN--------------LERQLEELEAQLEELESKLDELAEELAEL 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1186 LQQLKELQANKDAvdvacqkhikEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLaRNQRELLQevsiltaerdsa 1265
Cdd:TIGR02168 343 EEKLEELKEELES----------LEAELEELEAELEELESRLEELEEQLETLRSKVAQL-ELQIASLN------------ 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1266 qekdldlksthialkNEIDCLLQTNRSLQSEKEMLLKSREELcvslantanENQALKLRKDEMQTELETEREKLEKMTKD 1345
Cdd:TIGR02168 400 ---------------NEIERLEARLERLEDRRERLQQEIEEL---------LKKLEEAELKELQAELEELEEELEELQEE 455
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1346 NMDLKASLSSLSNFLEEMKSSREASNSEKIHLlqEALFASEQRLLAEREELVNENKAVT-EKLTKATADAVLAETAFTEk 1424
Cdd:TIGR02168 456 LERLEEALEELREELEEAEQALDAAERELAQL--QARLDSLERLQENLEGFSEGVKALLkNQSGLSGILGVLSELISVD- 532
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1425 iNELNLEKESVFSKSLQfekhneALLREKDELERKYSELLDEKKSLENAFS--DMKREQELDFSAKRLLVQENTTLKYSI 1502
Cdd:TIGR02168 533 -EGYEAAIEAALGGRLQ------AVVVENLNAAKKAIAFLKQNELGRVTFLplDSIKGTEIQGNDREILKNIEGFLGVAK 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1503 EALEEELKKKNLENQELIACRsdLSDLLKEAQDARRTLENELAAVSHAKQVLSSSF-------NTCSSD------IEILN 1569
Cdd:TIGR02168 606 DLVKFDPKLRKALSYLLGGVL--VVDDLDNALELAKKLRPGYRIVTLDGDLVRPGGvitggsaKTNSSIlerrreIEELE 683
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1570 RERTELQDKCQKLTGEVENMKENLT-VEKKARILDKESFLLERM--ELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEK 1646
Cdd:TIGR02168 684 EKIEELEEKIAELEKALAELRKELEeLEEELEQLRKELEELSRQisALRKDLARLEAEVEQLEERIAQLSKELTELEAEI 763
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1647 EKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESL 1726
Cdd:TIGR02168 764 EELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDL 843
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1727 HAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQTDAdfscrllvSEGKHELLLEEMSNLALKLREIErlqaqtfm 1806
Cdd:TIGR02168 844 EEQIEELSEDIESLAAEIEELEELIEELESELEALLNERAS--------LEEALALLRSELEELSEELRELE-------- 907
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1807 qkfeadKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQT-NEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKV 1885
Cdd:TIGR02168 908 ------SKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERlSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKI 981
|
...
gi 2024359618 1886 EEL 1888
Cdd:TIGR02168 982 KEL 984
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
358-1048 |
6.65e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 87.80 E-value: 6.65e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 358 LKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHdrhvLEMEAKMDQLRAMVEAADREKVELLNQLEEEKR 437
Cdd:TIGR02168 234 LEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEV----SELEEEIEELQKELYALANEISRLEQQKQILRE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 438 KVEDLQFRVEEESITKGDLERKRQISEDPENTQTKlehaRIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELE 517
Cdd:TIGR02168 310 RLANLERQLEELEAQLEELESKLDELAEELAELEE----KLEELKEELESLEAELEELEAELEELESRLEELEEQLETLR 385
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 518 RDLALRVKEVAELRGRLES-SKHIDDVDTSLS-LLQEISSLQEKMAAAgkehqrEMSSLKEKFESSEEALRKEIKTLSAS 595
Cdd:TIGR02168 386 SKVAQLELQIASLNNEIERlEARLERLEDRRErLQQEIEELLKKLEEA------ELKELQAELEELEEELEELQEELERL 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 596 NERMGKENESLKTKLDHANKENSDVIELwKSKLESAiashqQAMEELKVSFNKGVGAQTAEFAELKTQME------KVKL 669
Cdd:TIGR02168 460 EEALEELREELEEAEQALDAAERELAQL-QARLDSL-----ERLQENLEGFSEGVKALLKNQSGLSGILGvlseliSVDE 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 670 DYENEMSNL-----------KLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQH------LVEMEDT 732
Cdd:TIGR02168 534 GYEAAIEAAlggrlqavvveNLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFlgvakdLVKFDPK 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 733 LNK--------------LQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQL 798
Cdd:TIGR02168 614 LRKalsyllggvlvvddLDNALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILERRREIEELEEKIEELEEKI 693
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 799 QAAEKQIQNLETEkVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVMETKLKE 878
Cdd:TIGR02168 694 AELEKALAELRKE-LEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEE 772
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 879 REEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQsQQ 958
Cdd:TIGR02168 773 AEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEE-LS 851
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 959 ETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKhDADIKGFKQNLLDAEEALKAAQKKNDELETQ 1038
Cdd:TIGR02168 852 EDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEEL-SEELRELESKRSELRRELEELREKLAQLELR 930
|
730
....*....|
gi 2024359618 1039 AEELKKQAEQ 1048
Cdd:TIGR02168 931 LEGLEVRIDN 940
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
408-1195 |
6.88e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 87.80 E-value: 6.88e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 408 EAKMDQLRAMVEAA------DREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEDPENTQTKLEHARIKEL 481
Cdd:TIGR02168 151 EAKPEERRAIFEEAagiskyKERRKETERKLERTRENLDRLEDILNELERQLKSLERQAEKAERYKELKAELRELELALL 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 482 EQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLESSKHiddvdTSLSLLQEISSLQEKMA 561
Cdd:TIGR02168 231 VLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQK-----ELYALANEISRLEQQKQ 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 562 AAGKEHQREMSSLKEKFESSEEALRKEIKtLSASNERMGKENESLKTKLDHANKENSDVIELWKSkLESAIASHQQAMEE 641
Cdd:TIGR02168 306 ILRERLANLERQLEELEAQLEELESKLDE-LAEELAELEEKLEELKEELESLEAELEELEAELEE-LESRLEELEEQLET 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 642 LKVSFN---KGVGAQTAEFAELKTQMEKVKLDYENEMSNlklKQENEKSQHLKEIEALKAKLlevtEEKEQTLENLKAKL 718
Cdd:TIGR02168 384 LRSKVAqleLQIASLNNEIERLEARLERLEDRRERLQQE---IEELLKKLEEAELKELQAEL----EELEEELEELQEEL 456
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 719 ESVEDQhLVEMEDTLNKLQEAEIKVK-ELDVLQAKCNeqtkligSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQ 797
Cdd:TIGR02168 457 ERLEEA-LEELREELEEAEQALDAAErELAQLQARLD-------SLERLQENLEGFSEGVKALLKNQSGLSGILGVLSEL 528
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 798 LQAAEKQIQNLETEkvsnltkeLQGKEQKLL--DLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVMETK 875
Cdd:TIGR02168 529 ISVDEGYEAAIEAA--------LGGRLQAVVveNLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGF 600
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 876 LKEREEREQQLTEAKVKLENDIAE--IMKSSGDSSAQLMKMNDELRL---------------------------KERQLE 926
Cdd:TIGR02168 601 LGVAKDLVKFDPKLRKALSYLLGGvlVVDDLDNALELAKKLRPGYRIvtldgdlvrpggvitggsaktnssileRRREIE 680
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 927 QIQLELTKANEKAVQLQKNVEQTAQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEmITK 1006
Cdd:TIGR02168 681 ELEEKIEELEEKIAELEKALAELRKELEELEEE-LEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKE-LTE 758
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1007 HDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKkqaEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNT 1086
Cdd:TIGR02168 759 LEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLK---EELKALREALDELRAELTLLNEEAANLRERLESLERRIAA 835
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1087 LKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQA 1166
Cdd:TIGR02168 836 TERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRR 915
|
810 820
....*....|....*....|....*....
gi 2024359618 1167 DLLKITQENDALRSSESTLLQQLKELQAN 1195
Cdd:TIGR02168 916 ELEELREKLAQLELRLEGLEVRIDNLQER 944
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
844-1480 |
9.02e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 87.30 E-value: 9.02e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 844 LEKELQLLKEKFTSAVDgaENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKER 923
Cdd:COG1196 218 LKEELKELEAELLLLKL--RELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 924 QLEQIQLELTKANEKAVQLQKNVEQtAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEM 1003
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEE-LEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAEL 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1004 ITKhDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIElmsdkmRDLISEKETLAQE 1083
Cdd:COG1196 375 AEA-EEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELE------EEEEEEEEALEEA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1084 RNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIET 1163
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVA 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1164 AQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVAcQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDD 1243
Cdd:COG1196 528 VLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYL-KAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVAS 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1244 LARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKL 1323
Cdd:COG1196 607 DLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAE 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1324 RKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNEnKAV 1403
Cdd:COG1196 687 RLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDL-EEL 765
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359618 1404 TEKLTKATAD-AVLaetaftEKINELNLEkesvfskslQFEKHNEallrEKDELERKYSELLDEKKSLENAFSDMKRE 1480
Cdd:COG1196 766 ERELERLEREiEAL------GPVNLLAIE---------EYEELEE----RYDFLSEQREDLEEARETLEEAIEEIDRE 824
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
416-1214 |
1.44e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 86.66 E-value: 1.44e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 416 AMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEDPENTQTKLEHARIKELEQSLLFEKTKADKL 495
Cdd:TIGR02169 163 AGVAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAI 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 496 QRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLE--SSKHIDDVDTSL-SLLQEISSLQEKMAAAgKEHQREMS 572
Cdd:TIGR02169 243 ERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKdlGEEEQLRVKEKIgELEAEIASLERSIAEK-ERELEDAE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 573 SLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLdhanKENSDVIELWKSKLESAIASHQQAMEELKvSFNKGVGA 652
Cdd:TIGR02169 322 ERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEY----AELKEELEDLRAELEEVDKEFAETRDELK-DYREKLEK 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 653 QTAEFAELKTQMEKV---KLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVtEEKEQTLENLKAKLESVEDQH---- 725
Cdd:TIGR02169 397 LKREINELKRELDRLqeeLQRLSEELADLNAAIAGIEAKINELEEEKEDKALEI-KKQEWKLEQLAADLSKYEQELydlk 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 726 --LVEMEDTLNKLQ------EAEIKVKELDVLQAKCNEQTK------LIGSLTQQIRASEE--KLLDLAALQKANSegkl 789
Cdd:TIGR02169 476 eeYDRVEKELSKLQrelaeaEAQARASEERVRGGRAVEEVLkasiqgVHGTVAQLGSVGERyaTAIEVAAGNRLNN---- 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 790 eiqKLSEQLQAAEKQIQNLETEKVSNLTKELQGK---EQKLLDLEKNLSAVNQVKDSLEKELQLLKEKF-----TSAVDG 861
Cdd:TIGR02169 552 ---VVVEDDAVAKEAIELLKRRKAGRATFLPLNKmrdERRDLSILSEDGVIGFAVDLVEFDPKYEPAFKyvfgdTLVVED 628
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 862 AENAQRAMQ-----VMETKLKER---------------------EEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMN 915
Cdd:TIGR02169 629 IEAARRLMGkyrmvTLEGELFEKsgamtggsraprggilfsrsePAELQRLRERLEGLKRELSSLQSELRRIENRLDELS 708
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 916 DELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAK 995
Cdd:TIGR02169 709 QELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQE-IENVKSELKELEARIEELEEDLHKLEEALNDLEAR 787
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 996 YEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAE-QAKSLSSVLASARKEIELMSDKMRDLI 1074
Cdd:TIGR02169 788 LSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQeQRIDLKEQIKSIEKEIENLNGKKEELE 867
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1075 SEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELwtkNEELNSENKKILKQKEAAEAKSRQEST--EKVALIS 1152
Cdd:TIGR02169 868 EELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEEL---EAQIEKKRKRLSELKAKLEALEEELSEieDPKGEDE 944
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024359618 1153 EKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELE 1214
Cdd:TIGR02169 945 EIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAIL 1006
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1004-1897 |
4.18e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 85.12 E-value: 4.18e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1004 ITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAkslssvlasarkeielmsDKMRDLISEKEtlaqe 1083
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKA------------------ERYQALLKEKR----- 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1084 rntlKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEkskllsEIET 1163
Cdd:TIGR02169 222 ----EYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEE------EQLR 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1164 AQADLLKITQENDALRSSESTLLQQLKELQAnkdavdvacqKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDD 1243
Cdd:TIGR02169 292 VKEKIGELEAEIASLERSIAEKERELEDAEE----------RLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAE 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1244 LARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKL 1323
Cdd:TIGR02169 362 LKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEE 441
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1324 RKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMkssreasnSEKIHLLQEALFASEQRLLAEREElVNENKAV 1403
Cdd:TIGR02169 442 EKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRV--------EKELSKLQRELAEAEAQARASEER-VRGGRAV 512
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1404 TE--------------KLTKATADAVLA-ETAFTEKINELNLEKESVFSKSLQFEKHNEA-----LLREKDELERKYSEL 1463
Cdd:TIGR02169 513 EEvlkasiqgvhgtvaQLGSVGERYATAiEVAAGNRLNNVVVEDDAVAKEAIELLKRRKAgratfLPLNKMRDERRDLSI 592
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1464 LDEKKSLENAFSDMKREQEldFSAKRLLVQENTTLKYSIEAleeelKKKNLENQELIACRSDL----------SDLLKEA 1533
Cdd:TIGR02169 593 LSEDGVIGFAVDLVEFDPK--YEPAFKYVFGDTLVVEDIEA-----ARRLMGKYRMVTLEGELfeksgamtggSRAPRGG 665
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1534 QDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTvekkaRILDKESFLLERME 1613
Cdd:TIGR02169 666 ILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIE-----QLEQEEEKLKERLE 740
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1614 -LQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVikEKMILYKETEQLASKIEQLKSDFTSLSVSKAELE 1692
Cdd:TIGR02169 741 eLEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDL--EARLSHSRIPEIQAELSKLEEEVSRIEARLREIE 818
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1693 dvhscvsVMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALleqtdadfscr 1772
Cdd:TIGR02169 819 -------QKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDL----------- 880
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1773 llvsEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIH------QEKIETLASLENS 1846
Cdd:TIGR02169 881 ----ESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEdpkgedEEIPEEELSLEDV 956
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|.
gi 2024359618 1847 RQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKL 1897
Cdd:TIGR02169 957 QAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILE 1007
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
354-1021 |
2.83e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 82.41 E-value: 2.83e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 354 LQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDrhvlEMEAKMDQLRAMVEAADREKVELLNQLE 433
Cdd:TIGR02168 314 LERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELE----ELEAELEELESRLEELEEQLETLRSKVA 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 434 EEKRKVEDLQFRVEEESITKGDLERKRQI-SEDPENTQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSR 512
Cdd:TIGR02168 390 QLELQIASLNNEIERLEARLERLEDRRERlQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREE 469
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 513 IMELERDLALRVKEVAELRGRLESSKhiddvdtslSLLQEISSLQEKMAAAgKEHQREMS----------SLKEKFESS- 581
Cdd:TIGR02168 470 LEEAEQALDAAERELAQLQARLDSLE---------RLQENLEGFSEGVKAL-LKNQSGLSgilgvlseliSVDEGYEAAi 539
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 582 EEALRKEIKTLSASNERMG-------KENES-------LKTKLDHANKENSDVIELWKSKLESAIASHQQAMEELKVSFN 647
Cdd:TIGR02168 540 EAALGGRLQAVVVENLNAAkkaiaflKQNELgrvtflpLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALS 619
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 648 kGVGAQTAEFAELKTQMEKVKLDYENEM----------------------SNLKLKQENEKSQHLKEIEALKAKLLEVT- 704
Cdd:TIGR02168 620 -YLLGGVLVVDDLDNALELAKKLRPGYRivtldgdlvrpggvitggsaktNSSILERRREIEELEEKIEELEEKIAELEk 698
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 705 ---------EEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLL 775
Cdd:TIGR02168 699 alaelrkelEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELA 778
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 776 DLAALQKANSEgklEIQKLSEQLQAAEKQIQNLETEkVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKF 855
Cdd:TIGR02168 779 EAEAEIEELEA---QIEQLKEELKALREALDELRAE-LTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDI 854
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 856 TSAVDGAENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKA 935
Cdd:TIGR02168 855 ESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGL 934
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 936 NEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQME-------TSQNQYKDLQAKYeketsEMITKHD 1008
Cdd:TIGR02168 935 EVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKelgpvnlAAIEEYEELKERY-----DFLTAQK 1009
|
730
....*....|...
gi 2024359618 1009 ADIKGFKQNLLDA 1021
Cdd:TIGR02168 1010 EDLTEAKETLEEA 1022
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
870-1677 |
9.93e-15 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 80.50 E-value: 9.93e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 870 QVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQT 949
Cdd:TIGR02169 198 QQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEEL 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 950 AQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKyEKETSEMITKHDADIKGFKQNLldAEEALKAAQ 1029
Cdd:TIGR02169 278 NKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEER-LAKLEAEIDKLLAEIEELEREI--EEERKRRDK 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1030 KKnDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQ 1109
Cdd:TIGR02169 355 LT-EEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIE 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1110 QDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQL 1189
Cdd:TIGR02169 434 AKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVE 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1190 KELQANKDAVDVACQKHIKEREElehYQKLLEE------NDRVIKDkddviqrlqssyDDLARNQRELLQEVSI-----L 1258
Cdd:TIGR02169 514 EVLKASIQGVHGTVAQLGSVGER---YATAIEVaagnrlNNVVVED------------DAVAKEAIELLKRRKAgratfL 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1259 TAERDSAQEKDLDLKSTHIALKNEIDCL----------------------LQTNRSLQSEKEMLLKSREELCVSLANT-- 1314
Cdd:TIGR02169 579 PLNKMRDERRDLSILSEDGVIGFAVDLVefdpkyepafkyvfgdtlvvedIEAARRLMGKYRMVTLEGELFEKSGAMTgg 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1315 ANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASnSEKIHLLQealfaSEQRLLAERE 1394
Cdd:TIGR02169 659 SRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDA-SRKIGEIE-----KEIEQLEQEE 732
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1395 ELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSK-SLQFEKHNEALLREK-DELERKYSELLDEKKSLEN 1472
Cdd:TIGR02169 733 EKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKlEEALNDLEARLSHSRiPEIQAELSKLEEEVSRIEA 812
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1473 AFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVshakq 1552
Cdd:TIGR02169 813 RLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDL----- 887
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1553 vlsssfntcSSDIEILNRERTELQDKCQKLTGEVENMKENLTVEKKAR---------ILDKESFLLERMELQNNIGFLEK 1623
Cdd:TIGR02169 888 ---------KKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLealeeelseIEDPKGEDEEIPEEELSLEDVQA 958
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....
gi 2024359618 1624 EVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQL 1677
Cdd:TIGR02169 959 ELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEY 1012
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
792-1345 |
1.37e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 79.98 E-value: 1.37e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 792 QKLSEQLQAAEKQIQNLE----TEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQR 867
Cdd:COG1196 216 RELKEELKELEAELLLLKlrelEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 868 AMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVE 947
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELA 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 948 Q------TAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKgFKQNLLDA 1021
Cdd:COG1196 376 EaeeeleELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEE-AAEEEAEL 454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1022 EEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEM 1101
Cdd:COG1196 455 EEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEA 534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1102 ESKILLV---QQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDAL 1178
Cdd:COG1196 535 AYEAALEaalAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADAR 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1179 RSSESTLLQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLqssyddLARNQRELLQEVSIL 1258
Cdd:COG1196 615 YYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAA------LLEAEAELEELAERL 688
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1259 TAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREK 1338
Cdd:COG1196 689 AEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERE 768
|
....*..
gi 2024359618 1339 LEKMTKD 1345
Cdd:COG1196 769 LERLERE 775
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1175-1968 |
2.46e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 79.33 E-value: 2.46e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1175 NDALRSSESTLL-QQLKELQANKDAVDVACQKHIKEREELehyQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQ 1253
Cdd:TIGR02168 219 KAELRELELALLvLRLEELREELEELQEELKEAEEELEEL---TAELQELEEKLEELRLEVSELEEEIEELQKELYALAN 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1254 EVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELE 1333
Cdd:TIGR02168 296 EISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLE 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1334 TEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREEL---VNENKAVTEKLTKA 1410
Cdd:TIGR02168 376 ELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELqaeLEELEEELEELQEE 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1411 TADAVLAETAFTEKINELNLEKESVFSK--SLQFEKHN-EALLREKDELERKYSELLDEKKSLENAFS--------DMKR 1479
Cdd:TIGR02168 456 LERLEEALEELREELEEAEQALDAAERElaQLQARLDSlERLQENLEGFSEGVKALLKNQSGLSGILGvlselisvDEGY 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1480 EQELDF----SAKRLLVQENTTLKYSIEALEEELKKK------------------NLENQELIACRSDLSDLLKEAQDAR 1537
Cdd:TIGR02168 536 EAAIEAalggRLQAVVVENLNAAKKAIAFLKQNELGRvtflpldsikgteiqgndREILKNIEGFLGVAKDLVKFDPKLR 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1538 RTLENELAAVshakqVLSSSFNTCSSDIEILNRERT------ELQDKCQKLTGEVENmKENLTVEKKARILDKESfllER 1611
Cdd:TIGR02168 616 KALSYLLGGV-----LVVDDLDNALELAKKLRPGYRivtldgDLVRPGGVITGGSAK-TNSSILERRREIEELEE---KI 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1612 MELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAEL 1691
Cdd:TIGR02168 687 EELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEEL 766
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1692 EDvhscvsvMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKvVALLEQTDADFSC 1771
Cdd:TIGR02168 767 EE-------RLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRER-LESLERRIAATER 838
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1772 RLLVSEGKHELLLEEMSNLALKLRE----IERLQAQT------FMQKFEADKRAEEVLQTMEKVTKEKDaihQEKIETLA 1841
Cdd:TIGR02168 839 RLEDLEEQIEELSEDIESLAAEIEEleelIEELESELeallneRASLEEALALLRSELEELSEELRELE---SKRSELRR 915
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1842 SLENSRQTNEKLQNELDMLKQNNLKNEEELTkSKELLNLENKKVEELKKEFEALKLAAAQKS--QQLAALQEENVKLAEE 1919
Cdd:TIGR02168 916 ELEELREKLAQLELRLEGLEVRIDNLQERLS-EEYSLTLEEAEALENKIEDDEEEARRRLKRleNKIKELGPVNLAAIEE 994
|
810 820 830 840
....*....|....*....|....*....|....*....|....*....
gi 2024359618 1920 LgrsrdevtshQKLEEERSVLNNQLLEMKKSLpsNTLRESTlkKEIDEE 1968
Cdd:TIGR02168 995 Y----------EELKERYDFLTAQKEDLTEAK--ETLEEAI--EEIDRE 1029
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
727-1639 |
3.97e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 78.57 E-value: 3.97e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 727 VEMEDTLNKLQEAEIKVKELDVLQAKCNEQTkligsltQQIRASEEKLLDLAALQKANSEGKL-----EIQKLSEQLQAA 801
Cdd:TIGR02169 170 RKKEKALEELEEVEENIERLDLIIDEKRQQL-------ERLRREREKAERYQALLKEKREYEGyellkEKEALERQKEAI 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 802 EKQIQNLETEKvSNLTKELQGKEQKLLDLEKNLSAVN-QVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVMETKLKERE 880
Cdd:TIGR02169 243 ERQLASLEEEL-EKLTEEISELEKRLEEIEQLLEELNkKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 881 EREQQLTEAKVKLENDIAEImkssgdssaqlmkmndelrlkERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQsQQET 960
Cdd:TIGR02169 322 ERLAKLEAEIDKLLAEIEEL---------------------EREIEEERKRRDKLTEEYAELKEELEDLRAELEE-VDKE 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 961 LKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEmITKHDADIKGFKQNLLDAEEalkaaqkkndELETQAE 1040
Cdd:TIGR02169 380 FAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEE-LADLNAAIAGIEAKINELEE----------EKEDKAL 448
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1041 ELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNE 1120
Cdd:TIGR02169 449 EIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVA 528
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1121 ELNSENKKILKQKEAAEAKSRQE---STEKVAliSEKSKLLSEIETAQADLLKITQENDALRssestLLQQLKELQANKD 1197
Cdd:TIGR02169 529 QLGSVGERYATAIEVAAGNRLNNvvvEDDAVA--KEAIELLKRRKAGRATFLPLNKMRDERR-----DLSILSEDGVIGF 601
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1198 AVD-VACQKHIKER-----------EELEHYQKLLEENDRV-----IKDKDDVIQRLQSSYDDLARNQRELLQEVSILTA 1260
Cdd:TIGR02169 602 AVDlVEFDPKYEPAfkyvfgdtlvvEDIEAARRLMGKYRMVtlegeLFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRE 681
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1261 ERDSaqekdldlksthiaLKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLE 1340
Cdd:TIGR02169 682 RLEG--------------LKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLS 747
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1341 KMTKDNMDLKASLSSLSNFLEEMKssreasnsEKIHLLQEALFASEQRLLAER-----------EELVNENKAVTEKLTK 1409
Cdd:TIGR02169 748 SLEQEIENVKSELKELEARIEELE--------EDLHKLEEALNDLEARLSHSRipeiqaelsklEEEVSRIEARLREIEQ 819
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1410 ATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREqeldfsakr 1489
Cdd:TIGR02169 820 KLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKE--------- 890
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1490 llvqenttlkysIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSfNTCSSDIEILN 1569
Cdd:TIGR02169 891 ------------RDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEI-PEEELSLEDVQ 957
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1570 RERTELQDKCQKLtGEVeNMKEnltvekkarILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEK 1639
Cdd:TIGR02169 958 AELQRVEEEIRAL-EPV-NMLA---------IQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKK 1016
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1018-1545 |
1.15e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 76.90 E-value: 1.15e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1018 LLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSS--------------VLASARKEIELMSDKMRDLISEKETLAQE 1083
Cdd:COG1196 224 ELEAELLLLKLRELEAELEELEAELEELEAELEELEAelaeleaeleelrlELEELELELEEAQAEEYELLAELARLEQD 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1084 RNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIET 1163
Cdd:COG1196 304 IARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEE 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1164 AQADLLKITQENDALRSSESTLLQQLKELQANKDAVDvacQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDD 1243
Cdd:COG1196 384 LAEELLEALRAAAELAAQLEELEEAEEALLERLERLE---EELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEA 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1244 LARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKL 1323
Cdd:COG1196 461 LLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAAL 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1324 RKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQE----ALFASEQRLLAEREELVNE 1399
Cdd:COG1196 541 EAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIgaavDLVASDLREADARYYVLGD 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1400 NKAV----TEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFS 1475
Cdd:COG1196 621 TLLGrtlvAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALL 700
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1476 DMKREQELDFSAKRLLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELA 1545
Cdd:COG1196 701 AEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELE 770
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
357-1142 |
1.34e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 77.03 E-value: 1.34e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 357 ALKEKQQHIEQ--LLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEAADREKVELLNQLEE 434
Cdd:TIGR02169 215 ALLKEKREYEGyeLLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 435 EKRKVEdlqfrvEEESITKGDLERKRQISEDPENTQTKLE------HARIKELEQSLLFEKTKADKLQRELEDTRVATVS 508
Cdd:TIGR02169 295 KIGELE------AEIASLERSIAEKERELEDAEERLAKLEaeidklLAEIEELEREIEEERKRRDKLTEEYAELKEELED 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 509 EKSRIMELERDLALRVKEVAELRGRLESSKH-IDDVDTSLSLLQEissLQEKMAAAGKEHQREMSSLKEK---FESSEEA 584
Cdd:TIGR02169 369 LRAELEEVDKEFAETRDELKDYREKLEKLKReINELKRELDRLQE---ELQRLSEELADLNAAIAGIEAKineLEEEKED 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 585 LRKEIK-------TLSASNERMGKENESLKTKLDHANKENSDVielwKSKLESAIASHQQ---------AMEELKVSFNK 648
Cdd:TIGR02169 446 KALEIKkqewkleQLAADLSKYEQELYDLKEEYDRVEKELSKL----QRELAEAEAQARAseervrggrAVEEVLKASIQ 521
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 649 GVGAQTAEFAELKTQMEK-VKLDYENEMSNLKLKQEN---EKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQ 724
Cdd:TIGR02169 522 GVHGTVAQLGSVGERYATaIEVAAGNRLNNVVVEDDAvakEAIELLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGF 601
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 725 --HLVEMEDtlnKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASE--EK-------LLDLAALQKANSEGKLEIQK 793
Cdd:TIGR02169 602 avDLVEFDP---KYEPAFKYVFGDTLVVEDIEAARRLMGKYRMVTLEGElfEKsgamtggSRAPRGGILFSRSEPAELQR 678
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 794 LSEQLQAAEKQIQNLEtEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVME 873
Cdd:TIGR02169 679 LRERLEGLKRELSSLQ-SELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVK 757
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 874 TKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSsaQLMKMNDELRLKERQLEQI--QLELTKANEKAVQLQKNVEQTAQ 951
Cdd:TIGR02169 758 SELKELEARIEELEEDLHKLEEALNDLEARLSHS--RIPEIQAELSKLEEEVSRIeaRLREIEQKLNRLTLEKEYLEKEI 835
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 952 KAEQSQQETLKTHQEELKKMQD----QLTDMKKQMETSQNQYKDLQAKYeketsemitkhdadiKGFKQNLLDAEEALKA 1027
Cdd:TIGR02169 836 QELQEQRIDLKEQIKSIEKEIEnlngKKEELEEELEELEAALRDLESRL---------------GDLKKERDELEAQLRE 900
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1028 AQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEK---ETLAQERNTLKLEKESLLSQHLEMESK 1104
Cdd:TIGR02169 901 LERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEElslEDVQAELQRVEEEIRALEPVNMLAIQE 980
|
810 820 830
....*....|....*....|....*....|....*...
gi 2024359618 1105 ILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQ 1142
Cdd:TIGR02169 981 YEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKRE 1018
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
565-1432 |
2.68e-13 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 75.95 E-value: 2.68e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 565 KEHQREMSSLKEKFESSEEALRKEiktlsasnerMGKENESLKTKLDHANKENSDVIELWKSKLESAIASHQQAMEELKV 644
Cdd:PTZ00121 1084 KEDNRADEATEEAFGKAEEAKKTE----------TGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKR 1153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 645 SFNKGVGAQTAEFAELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKakllevTEEKEQTLENLKAKLESVEDQ 724
Cdd:PTZ00121 1154 VEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAAR------KAEEERKAEEARKAEDAKKAE 1227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 725 HLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEK- 803
Cdd:PTZ00121 1228 AVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEa 1307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 804 QIQNLETEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVMETK---LKERE 880
Cdd:PTZ00121 1308 KKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKadaAKKKA 1387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 881 EREQQLTEAKVKLENDiaeimkssgDSSAQLMKMNDELRLKERQLEQIQLELTKANE--KAVQLQKNVEQTAQKAEQSQQ 958
Cdd:PTZ00121 1388 EEKKKADEAKKKAEED---------KKKADELKKAAAAKKKADEAKKKAEEKKKADEakKKAEEAKKADEAKKKAEEAKK 1458
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 959 -ETLKTHQEELKKMQdqltDMKKQMETSQnqykdlQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELET 1037
Cdd:PTZ00121 1459 aEEAKKKAEEAKKAD----EAKKKAEEAK------KADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAK 1528
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1038 QAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQhLEMESKILLVQQDREELWT 1117
Cdd:PTZ00121 1529 KAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKK-AEEARIEEVMKLYEEEKKM 1607
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1118 KNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTL-LQQLKELQANK 1196
Cdd:PTZ00121 1608 KAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKkAEEAKKAEEDE 1687
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1197 DAVDVACQKHIKEREELEHYQKLLEENDRV---IKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLK 1273
Cdd:PTZ00121 1688 KKAAEALKKEAEEAKKAEELKKKEAEEKKKaeeLKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEE 1767
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1274 STHIALKNEIDCLLQtnrslQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASL 1353
Cdd:PTZ00121 1768 KKAEEIRKEKEAVIE-----EELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQ 1842
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359618 1354 SSLSNFLEEMKSSREASNSEKIHllQEALFASEQRLLAEREELVNENKAVtEKLTKATADAVLAETAFTEKINELNLEK 1432
Cdd:PTZ00121 1843 LEEADAFEKHKFNKNNENGEDGN--KEADFNKEKDLKEDDEEEIEEADEI-EKIDKDDIEREIPNNNMAGKNNDIIDDK 1918
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
636-1447 |
3.88e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 75.49 E-value: 3.88e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 636 QQAMEELKVsfnkgVGAQTAEF----AELKTQMEKVKLDYENEMSNLKL---KQENEKSQHLKEIEALKAKLLEVT---E 705
Cdd:TIGR02169 173 EKALEELEE-----VEENIERLdliiDEKRQQLERLRREREKAERYQALlkeKREYEGYELLKEKEALERQKEAIErqlA 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 706 EKEQTLENLKAKLESVEDQhLVEMEDTLNKLqEAEIKVK---ELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQK 782
Cdd:TIGR02169 248 SLEEELEKLTEEISELEKR-LEEIEQLLEEL-NKKIKDLgeeEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLA 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 783 ansEGKLEIQKLSEQLQAAEKQIQNLETEKVSnLTKELQGKEQKLLDLEKNLSAVnqvkdslEKELQLLKEKFTSAVDGA 862
Cdd:TIGR02169 326 ---KLEAEIDKLLAEIEELEREIEEERKRRDK-LTEEYAELKEELEDLRAELEEV-------DKEFAETRDELKDYREKL 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 863 ENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQL 942
Cdd:TIGR02169 395 EKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDL 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 943 QknveqtaqkaeqsqqETLKTHQEELKKMQDQLTDMKKQMETSQNQykdlqAKYEKETSEMITKHDADIKGFKQNLLDAE 1022
Cdd:TIGR02169 475 K---------------EEYDRVEKELSKLQRELAEAEAQARASEER-----VRGGRAVEEVLKASIQGVHGTVAQLGSVG 534
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1023 EA------------LKAAQKKNDELETQAEELKKQaEQAKSLSSV----LASARKEIELMSDK----------------- 1069
Cdd:TIGR02169 535 ERyataievaagnrLNNVVVEDDAVAKEAIELLKR-RKAGRATFLplnkMRDERRDLSILSEDgvigfavdlvefdpkye 613
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1070 ------------MRDLISEKETLAQER----------------------NTLKLEKESLLSQHLEMESKILLVQQDREEL 1115
Cdd:TIGR02169 614 pafkyvfgdtlvVEDIEAARRLMGKYRmvtlegelfeksgamtggsrapRGGILFSRSEPAELQRLRERLEGLKRELSSL 693
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1116 WTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQAN 1195
Cdd:TIGR02169 694 QSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEED 773
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1196 KDAVDVACQKhIKEREELEHYQKLLEENDRVikdkDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKST 1275
Cdd:TIGR02169 774 LHKLEEALND-LEARLSHSRIPEIQAELSKL----EEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQ 848
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1276 HIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSS 1355
Cdd:TIGR02169 849 IKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEA 928
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1356 LSNFLEEM-----KSSREASNSEKIHLLQEALFASEQRLLA----------EREELVNENKAVTEKLTKATADAvlaeTA 1420
Cdd:TIGR02169 929 LEEELSEIedpkgEDEEIPEEELSLEDVQAELQRVEEEIRAlepvnmlaiqEYEEVLKRLDELKEKRAKLEEER----KA 1004
|
890 900
....*....|....*....|....*..
gi 2024359618 1421 FTEKINELNLEKESVFSKSlqFEKHNE 1447
Cdd:TIGR02169 1005 ILERIEEYEKKKREVFMEA--FEAINE 1029
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1326-2093 |
5.92e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 74.72 E-value: 5.92e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1326 DEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREasNSEKIHLLQEALFASEQRLLA-EREELVNENKAVT 1404
Cdd:TIGR02169 166 AEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRRERE--KAERYQALLKEKREYEGYELLkEKEALERQKEAIE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1405 EKLtkATADAVLAEtaFTEKINELNLEKESVFSKSLQFEKHNEALLR-EKDELERKYSELLDEKKSLENAFSDMKREQEL 1483
Cdd:TIGR02169 244 RQL--ASLEEELEK--LTEEISELEKRLEEIEQLLEELNKKIKDLGEeEQLRVKEKIGELEAEIASLERSIAEKERELED 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1484 DFSAKRLLVQENTTLKYSIEALEEELKKKNLEnqeliacRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSS 1563
Cdd:TIGR02169 320 AEERLAKLEAEIDKLLAEIEELEREIEEERKR-------RDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYRE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1564 DIEILNRERTE-------LQDKCQKLTGEVENMKENLTVeKKARILDKESfllERMELQNNIGFLEKEVEEMREKNKEFL 1636
Cdd:TIGR02169 393 KLEKLKREINElkreldrLQEELQRLSEELADLNAAIAG-IEAKINELEE---EKEDKALEIKKQEWKLEQLAADLSKYE 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1637 TEKELLVQEKEKSETKLEEVIKEkmILYKETEQLASKIEQLKSDFTSLsVSKAELEDVHSCVSvMLDELQHKY------- 1709
Cdd:TIGR02169 469 QELYDLKEEYDRVEKELSKLQRE--LAEAEAQARASEERVRGGRAVEE-VLKASIQGVHGTVA-QLGSVGERYataieva 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1710 ------------EVTEKEKMELVQENESLHAEWKSLVIINEEiLKEKEKLSK-----------EYYKLHEKVVA------ 1760
Cdd:TIGR02169 545 agnrlnnvvvedDAVAKEAIELLKRRKAGRATFLPLNKMRDE-RRDLSILSEdgvigfavdlvEFDPKYEPAFKyvfgdt 623
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1761 -LLEQTDAD----FSCRLLVSEGKhelLLEE---MSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAI 1832
Cdd:TIGR02169 624 lVVEDIEAArrlmGKYRMVTLEGE---LFEKsgaMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRI 700
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1833 HQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEE 1912
Cdd:TIGR02169 701 ENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEA 780
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1913 NVKLAEELGRSR-DEVTSH-QKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEI----------DEERASLQKSISDTS 1980
Cdd:TIGR02169 781 LNDLEARLSHSRiPEIQAElSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIqelqeqridlKEQIKSIEKEIENLN 860
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1981 ALITQKDEELEKLRNEITVLRGEnasAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSGDIAANLLQDE 2060
Cdd:TIGR02169 861 GKKEELEEELEELEAALRDLESR---LGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIE 937
|
810 820 830
....*....|....*....|....*....|...
gi 2024359618 2061 SAEDKQQEIDFLNSVIVDLQRRNEELNLKIQRM 2093
Cdd:TIGR02169 938 DPKGEDEEIPEEELSLEDVQAELQRVEEEIRAL 970
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
358-972 |
8.17e-13 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 74.38 E-value: 8.17e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 358 LKEKQQHIEQLLAERDLE----RAEVAKATSHVGEIEQELALVRDG-------HDRHVLEMEAKMDQLRAMVEAADREKV 426
Cdd:pfam15921 262 LQQHQDRIEQLISEHEVEitglTEKASSARSQANSIQSQLEIIQEQarnqnsmYMRQLSDLESTVSQLRSELREAKRMYE 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 427 ELLNQLEEekrkvedlQFRVEEESITKGDLERKrQISEDPENTQTKLE------HARIKELeqSLLFEKTK--------- 491
Cdd:pfam15921 342 DKIEELEK--------QLVLANSELTEARTERD-QFSQESGNLDDQLQklladlHKREKEL--SLEKEQNKrlwdrdtgn 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 492 ---ADKLQRELEDtrvatvseksRIMELERDLALRVKEVAELRGRLEsskhiddvdtslsllQEISSLQEKmaaagKEHQ 568
Cdd:pfam15921 411 sitIDHLRRELDD----------RNMEVQRLEALLKAMKSECQGQME---------------RQMAAIQGK-----NESL 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 569 REMSSLKEKFESSEEALRKEIKTLSAsnERMGKEN-ESLKTKLDHANKENSDVIELWKS---KLESAIASHQQAMEELKV 644
Cdd:pfam15921 461 EKVSSLTAQLESTKEMLRKVVEELTA--KKMTLESsERTVSDLTASLQEKERAIEATNAeitKLRSRVDLKLQELQHLKN 538
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 645 SFNKGVGAQTaEFAELKTQMEkvkldyENEMSNLKLKQENEKSQHLKEIEALKAKLLEVtEEKEQTLENLKAKLESVEDQ 724
Cdd:pfam15921 539 EGDHLRNVQT-ECEALKLQMA------EKDKVIEILRQQIENMTQLVGQHGRTAGAMQV-EKAQLEKEINDRRLELQEFK 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 725 HLVEMEDTlnKLQEAEIKVKELDVlqakcnEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQ 804
Cdd:pfam15921 611 ILKDKKDA--KIRELEARVSDLEL------EKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRN 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 805 IQNL--ETEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENA-QRAMQVMETKLKEREE 881
Cdd:pfam15921 683 FRNKseEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRGQIDAlQSKIQFLEEAMTNANK 762
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 882 REQQLTEAKVKLENDIAEIMKSSGDSSAQLmkmnDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETL 961
Cdd:pfam15921 763 EKHFLKEEKNKLSQELSTVATEKNKMAGEL----EVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQESVRLK 838
|
650
....*....|.
gi 2024359618 962 KTHQEELKKMQ 972
Cdd:pfam15921 839 LQHTLDVKELQ 849
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
345-1034 |
1.69e-12 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 73.64 E-value: 1.69e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 345 ARKISGTTALQEALKE-----KQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlvRDGHDRHVLEMEAKMDQLRamvE 419
Cdd:PTZ00121 1223 AKKAEAVKKAEEAKKDaeeakKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEA--RKADELKKAEEKKKADEAK---K 1297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 420 AADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEDPENTQTKLEHARIKELEQSLlfEKTKADKLQREL 499
Cdd:PTZ00121 1298 AEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAE--EKAEAAEKKKEE 1375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 500 EDTRVATV----SEKSRIMELERDLALRVKEVAELRGRLESSKHIDDVDTSLSLLQEISSLQEKMAAAGK--------EH 567
Cdd:PTZ00121 1376 AKKKADAAkkkaEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKadeakkkaEE 1455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 568 QREMSSLKEKFESSEEALRKEIKTLSASN-ERMGKENESLKTKLDHANKENsdviELWKSKLESAIASHQQAMEELKvsf 646
Cdd:PTZ00121 1456 AKKAEEAKKKAEEAKKADEAKKKAEEAKKaDEAKKKAEEAKKKADEAKKAA----EAKKKADEAKKAEEAKKADEAK--- 1528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 647 nKGVGAQTAEfaELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHL 726
Cdd:PTZ00121 1529 -KAEEAKKAD--EAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEK 1605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 727 VEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEklldlaaLQKANSEGKLEIQKLSEQLQAAEKQIQ 806
Cdd:PTZ00121 1606 KMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEE-------LKKAEEENKIKAAEEAKKAEEDKKKAE 1678
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 807 NLETEKvsnltKELQGKEQKLLDLEKNLSAVNQVKDSLEKELqllkekftsavdgaenaQRAMQVMetklKEREEREQQL 886
Cdd:PTZ00121 1679 EAKKAE-----EDEKKAAEALKKEAEEAKKAEELKKKEAEEK-----------------KKAEELK----KAEEENKIKA 1732
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 887 TEAKVKLENDiaeimkssgdssaqlMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQkaEQSQQETLKTHQE 966
Cdd:PTZ00121 1733 EEAKKEAEED---------------KKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIE--EELDEEDEKRRME 1795
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359618 967 ELKKMQDQLTDMKKQMETsqNQYKDLQAKYEKETSEMITKHDADIKGFKQNllDAEEALKAAQKKNDE 1034
Cdd:PTZ00121 1796 VDKKIKDIFDNFANIIEG--GKEGNLVINDSKEMEDSAIKEVADSKNMQLE--EADAFEKHKFNKNNE 1859
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
965-1751 |
1.80e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 73.17 E-value: 1.80e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 965 QEELKKMQDQLTDMKKQMETSQNQYKdlQAKYEKETSEMITKHDADIkgfkqnlldaeeALKAAQKKNDELETQAEELKK 1044
Cdd:TIGR02168 185 RENLDRLEDILNELERQLKSLERQAE--KAERYKELKAELRELELAL------------LVLRLEELREELEELQEELKE 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1045 QAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELns 1124
Cdd:TIGR02168 251 AEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEEL-- 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1125 ENKKILKQKEAAEAKSRQESTEKV-----ALISEKSKLLSEIETAQADLLK-ITQENDALRSSESTLLQQLKELQANKDA 1198
Cdd:TIGR02168 329 ESKLDELAEELAELEEKLEELKEElesleAELEELEAELEELESRLEELEEqLETLRSKVAQLELQIASLNNEIERLEAR 408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1199 VDVACQKHIKEREELEHYQKLLEENDRviKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIA 1278
Cdd:TIGR02168 409 LERLEDRRERLQQEIEELLKKLEEAEL--KELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQ 486
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1279 LKNEIDCL---LQTNRSLQSEKEMLLKSRE-------------------ELCVSLANTANENQAL----KLRKDEMQTEL 1332
Cdd:TIGR02168 487 LQARLDSLerlQENLEGFSEGVKALLKNQSglsgilgvlselisvdegyEAAIEAALGGRLQAVVvenlNAAKKAIAFLK 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1333 ETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNS-----EKIHLLQEALFA------SEQRLLAEREELVNENK 1401
Cdd:TIGR02168 567 QNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDlvkfdPKLRKALSYLLGgvlvvdDLDNALELAKKLRPGYR 646
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1402 AVTEKLTKATADAVLAETAFTEKINELNLEKEsvfskSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQ 1481
Cdd:TIGR02168 647 IVTLDGDLVRPGGVITGGSAKTNSSILERRRE-----IEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKEL 721
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1482 ELDFSAKRLLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTC 1561
Cdd:TIGR02168 722 EELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKAL 801
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1562 SSDIEILNRERTELQDKCQKLTGEVENMkENLTVEKKARILD----KESFLLERMELQNNIGFLEKEVEEMREKNKEFLT 1637
Cdd:TIGR02168 802 REALDELRAELTLLNEEAANLRERLESL-ERRIAATERRLEDleeqIEELSEDIESLAAEIEELEELIEELESELEALLN 880
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1638 EKE-------LLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELED-VHSCVSVMLDELQHKY 1709
Cdd:TIGR02168 881 ERAsleealaLLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQErLSEEYSLTLEEAEALE 960
|
810 820 830 840
....*....|....*....|....*....|....*....|..
gi 2024359618 1710 EVTEKEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEY 1751
Cdd:TIGR02168 961 NKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERY 1002
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
408-1212 |
2.37e-12 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 72.84 E-value: 2.37e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 408 EAKMDQLRAMVEAADREKVELLnqLEEEKRKVEDLQFRVEEESitkgDLERKRQ--ISEDPENTQTKLEHARIKEleQSL 485
Cdd:pfam15921 58 EVELDSPRKIIAYPGKEHIERV--LEEYSHQVKDLQRRLNESN----ELHEKQKfyLRQSVIDLQTKLQEMQMER--DAM 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 486 LFEKTKADKLQRELEDTRVATVSEKSRIMELERD-LALRVKEVAELRGRLESSKHIddvdtslslLQEISS-LQEKMAAA 563
Cdd:pfam15921 130 ADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEDmLEDSNTQIEQLRKMMLSHEGV---------LQEIRSiLVDFEEAS 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 564 GKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELwksklesAIASHQQAMEELK 643
Cdd:pfam15921 201 GKKIYEHDSMSTMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKSESQNKIEL-------LLQQHQDRIEQLI 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 644 VSFNKGVGAQTAEFAELKTQMEKVkldyENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVED 723
Cdd:pfam15921 274 SEHEVEITGLTEKASSARSQANSI----QSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEK 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 724 QHLVEMEDtlnkLQEAEIKVKELDVLQAKCNEQ-TKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAE 802
Cdd:pfam15921 350 QLVLANSE----LTEARTERDQFSQESGNLDDQlQKLLADLHKREKELSLEKEQNKRLWDRDTGNSITIDHLRRELDDRN 425
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 803 KQIQNLETeKVSNLTKELQGK-EQKLLDLE---KNLSAVNQVKDSLEKELQLLK---EKFTSAVDGAENAQRAMQVMETK 875
Cdd:pfam15921 426 MEVQRLEA-LLKAMKSECQGQmERQMAAIQgknESLEKVSSLTAQLESTKEMLRkvvEELTAKKMTLESSERTVSDLTAS 504
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 876 LKEREEREQQLTEAKVKLENDIAEIMKSSgdssAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQ 955
Cdd:pfam15921 505 LQEKERAIEATNAEITKLRSRVDLKLQEL----QHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQ 580
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 956 sQQETLKTHQEELKKMQDQLTDMKKQMEtsqnQYKDLQAKYEKETSEMITKHdADIKGFKQNLLDA-EEALKAA----QK 1030
Cdd:pfam15921 581 -HGRTAGAMQVEKAQLEKEINDRRLELQ----EFKILKDKKDAKIRELEARV-SDLELEKVKLVNAgSERLRAVkdikQE 654
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1031 KN---DELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMR-DLISEKETLAQERNTLKlekesllSQHLEMESKIL 1106
Cdd:pfam15921 655 RDqllNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKmQLKSAQSELEQTRNTLK-------SMEGSDGHAMK 727
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1107 LVQQDREELWTKNEELNSENKKILKQKEAAEAKSRqestEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLL 1186
Cdd:pfam15921 728 VAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANK----EKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLK 803
|
810 820
....*....|....*....|....*....
gi 2024359618 1187 QQLKELQANKDAVDVA---CQKHIKEREE 1212
Cdd:pfam15921 804 EKVANMEVALDKASLQfaeCQDIIQRQEQ 832
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1110-2032 |
3.85e-12 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 72.00 E-value: 3.85e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1110 QDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQL 1189
Cdd:TIGR00606 206 QMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDN 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1190 KELQANKDAVDVACQKHIKEREEleHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSI--LTAERDSAQE 1267
Cdd:TIGR00606 286 SELELKMEKVFQGTDEQLNDLYH--NHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRlqLQADRHQEHI 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1268 KDLDLKSTHIALKNEIDCLLQ---TNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTK 1344
Cdd:TIGR00606 364 RARDSLIQSLATRLELDGFERgpfSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIE 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1345 DNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEK 1424
Cdd:TIGR00606 444 LKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQE 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1425 INELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDE------KKSLENAFSDMKREQ---ELDFSAKRLLVQEN 1495
Cdd:TIGR00606 524 MEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLlgyfpnKKQLEDWLHSKSKEInqtRDRLAKLNKELASL 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1496 TTLKYSIEALEEELKKKNLENQELI-------ACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEIL 1568
Cdd:TIGR00606 604 EQNKNHINNELESKEEQLSSYEDKLfdvcgsqDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVC 683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1569 NR------ERTELQDKCQKLTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELL 1642
Cdd:TIGR00606 684 QRvfqteaELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRL 763
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1643 VQEKEKSETKLEEVIKEkmilyketEQLAskiEQLKSDFTSLSVSKAELEDVhscvsvmldelqhkyevtEKEKMELVQE 1722
Cdd:TIGR00606 764 KNDIEEQETLLGTIMPE--------EESA---KVCLTDVTIMERFQMELKDV------------------ERKIAQQAAK 814
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1723 NESLhaewkSLVIINEEILKEKEKLSKEYYKLHEKVvALLEQTDADFSCRLLVSEGKHELLLEEMSNLALKLREIERLQA 1802
Cdd:TIGR00606 815 LQGS-----DLDRTVQQVNQEKQEKQHELDTVVSKI-ELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEE 888
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1803 QTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNnLKNEEELTKSKELLNLEN 1882
Cdd:TIGR00606 889 QLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEK-VKNIHGYMKDIENKIQDG 967
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1883 KKVEELKKEFEALKLAAaqksqQLAALQEENVKLAEELGRSRDEVTSHQKLEeerSVLNNQLLEMKkslpsntlRESTLK 1962
Cdd:TIGR00606 968 KDDYLKQKETELNTVNA-----QLEECEKHQEKINEDMRLMRQDIDTQKIQE---RWLQDNLTLRK--------RENELK 1031
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1963 kEIDEERASLQKSISDTSalITQKDEELEKLRNEITVLRGENASAKTLQsvvKTLESDKLKLEEKVKNLE 2032
Cdd:TIGR00606 1032 -EVEEELKQHLKEMGQMQ--VLQMKQEHQKLEENIDLIKRNHVLALGRQ---KGYEKEIKHFKKELREPQ 1095
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
215-275 |
6.04e-12 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 70.87 E-value: 6.04e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024359618 215 LKIGDRVLVGGTKaGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPRYGLF 275
Cdd:COG5244 4 LSVNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIF 63
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1033-1811 |
1.13e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 70.35 E-value: 1.13e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1033 DELETQAEELKKQAEQA---KSLSSVLAsaRKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQ 1109
Cdd:COG1196 196 GELERQLEPLERQAEKAeryRELKEELK--ELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1110 QDREELwtkNEELNSenkkilKQKEAAEAKSRQESTEKvalisEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQL 1189
Cdd:COG1196 274 LELEEL---ELELEE------AQAEEYELLAELARLEQ-----DIARLEERRRELEERLEELEEELAELEEELEELEEEL 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1190 KELQANKDAvdvacqkhikEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKD 1269
Cdd:COG1196 340 EELEEELEE----------AEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAE 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1270 LDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELcvslANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDL 1349
Cdd:COG1196 410 EALLERLERLEEELEELEEALAELEEEEEEEEEALEEA----AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEE 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1350 KASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEkltkATADAVLAEtaftekineln 1429
Cdd:COG1196 486 LAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALE----AALAAALQN----------- 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1430 lekesvfskslqfekhneaLLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEEL 1509
Cdd:COG1196 551 -------------------IVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREA 611
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1510 KKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVShakqvlsssfntcssdieilnRERTELQDKCQKLTGEVENM 1589
Cdd:COG1196 612 DARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVT---------------------LEGEGGSAGGSLTGGSRREL 670
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1590 KENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQ 1669
Cdd:COG1196 671 LAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEE 750
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1670 LASKIEQLKSDFTSLsvsKAELEdvhscvsvmldelqhkyevtekekmELVQENESLHAewkslviINEEILKEKEKLSK 1749
Cdd:COG1196 751 EALEELPEPPDLEEL---ERELE-------------------------RLEREIEALGP-------VNLLAIEEYEELEE 795
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024359618 1750 EYyklhekvVALLEQtdadfscrllvsegkHELLLEEMSNLALKLREIERLQAQTFMQKFEA 1811
Cdd:COG1196 796 RY-------DFLSEQ---------------REDLEEARETLEEAIEEIDRETRERFLETFDA 835
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
353-983 |
3.62e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 68.81 E-value: 3.62e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 353 ALQEALKEKQqhIEQLLAERDLERAEVAKATSHVGEIEQELAlvrdghdrhvlemeakmdQLRAMVEAADREKVELLNQL 432
Cdd:COG1196 217 ELKEELKELE--AELLLLKLRELEAELEELEAELEELEAELE------------------ELEAELAELEAELEELRLEL 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 433 EEEKRKVEDLQFRVEEESITKGDLERKRQisedpentqtkLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSR 512
Cdd:COG1196 277 EELELELEEAQAEEYELLAELARLEQDIA-----------RLEERRRELEERLEELEEELAELEEELEELEEELEELEEE 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 513 IMELERDLALRVKEVAELRGRLEsskhiddvdtslSLLQEISSLQEKMAAAGKEHQREMSSLKEKfESSEEALRKEIKTL 592
Cdd:COG1196 346 LEEAEEELEEAEAELAEAEEALL------------EAEAELAEAEEELEELAEELLEALRAAAEL-AAQLEELEEAEEAL 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 593 SASNERMGKENESLKTKLDHANKEnSDVIELWKSKLESAIASHQQAMEELKVSfnkgVGAQTAEFAELKTQMEKVKLDYE 672
Cdd:COG1196 413 LERLERLEEELEELEEALAELEEE-EEEEEEALEEAAEEEAELEEEEEALLEL----LAELLEEAALLEAALAELLEELA 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 673 NEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQhlvemedtlnklqeaeikvkeldvlqak 752
Cdd:COG1196 488 EAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAA---------------------------- 539
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 753 cnEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGK---LEIQKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQKLLD 829
Cdd:COG1196 540 --LEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRatfLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYV 617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 830 LEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSA 909
Cdd:COG1196 618 LGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEE 697
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 910 QLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEE------LKKMQDQLTDMKKQME 983
Cdd:COG1196 698 ALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEElpeppdLEELERELERLEREIE 777
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
362-1105 |
7.25e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 67.84 E-value: 7.25e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 362 QQHIEQLLAERdleraevakaTSHVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEAADREKVELLNQLEEEKRKVED 441
Cdd:pfam15921 73 KEHIERVLEEY----------SHQVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSQED 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 442 LQFRVEEesiTKGDLERKRQISEDP-ENTQTKLEHAR---------IKELEQSLL-FEKTKADKLQRELEDTRVATVSEK 510
Cdd:pfam15921 143 LRNQLQN---TVHELEAAKCLKEDMlEDSNTQIEQLRkmmlshegvLQEIRSILVdFEEASGKKIYEHDSMSTMHFRSLG 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 511 SRIMELERDLAlrvKEVAELRGR-------LESSKHIDDVDTSLSLLQEisslQEKMAAAGKEHQREMSSLKEKFESSEE 583
Cdd:pfam15921 220 SAISKILRELD---TEISYLKGRifpvedqLEALKSESQNKIELLLQQH----QDRIEQLISEHEVEITGLTEKASSARS 292
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 584 ALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVielwKSKLESAIASHQQAMEELKvsfnKGVGAQTAEFAELKTQ 663
Cdd:pfam15921 293 QANSIQSQLEIIQEQARNQNSMYMRQLSDLESTVSQL----RSELREAKRMYEDKIEELE----KQLVLANSELTEARTE 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 664 MEKvkldYENEMSNLKlkqenekSQHLKEIEALKAKLLEVTEEKEQTLENLKAKL-ESVEDQHLV-EMEDTLNKLQEAEI 741
Cdd:pfam15921 365 RDQ----FSQESGNLD-------DQLQKLLADLHKREKELSLEKEQNKRLWDRDTgNSITIDHLRrELDDRNMEVQRLEA 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 742 KVKeldVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEgklEIQKLSEQLQAAEKQIQNLEtEKVSNLTKELQ 821
Cdd:pfam15921 434 LLK---AMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKE---MLRKVVEELTAKKMTLESSE-RTVSDLTASLQ 506
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 822 GKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKftsaVDGAENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIM 901
Cdd:pfam15921 507 EKERAIEATNAEITKLRSRVDLKLQELQHLKNE----GDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQHG 582
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 902 KSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNV---EQTAQKAEQSQQETLKThQEELKKMQDQLTDm 978
Cdd:pfam15921 583 RTAGAMQVEKAQLEKEINDRRLELQEFKILKDKKDAKIRELEARVsdlELEKVKLVNAGSERLRA-VKDIKQERDQLLN- 660
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 979 kkQMETSQNQYKDLQAKYE---------KETSEMIT-KHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQ--- 1045
Cdd:pfam15921 661 --EVKTSRNELNSLSEDYEvlkrnfrnkSEEMETTTnKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQita 738
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359618 1046 ------AEQAKS--LSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKI 1105
Cdd:pfam15921 739 krgqidALQSKIqfLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKV 806
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1321-1999 |
8.95e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 67.45 E-value: 8.95e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1321 LKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSRE---ASNSEKIHLLQEALFASEQRLLAEREELV 1397
Cdd:pfam15921 115 LQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEdmlEDSNTQIEQLRKMMLSHEGVLQEIRSILV 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1398 NENKAVTEKLTKATADAVL----AETAFTEKINELNLEKESVFSKSLQFEKHNEALlreKDELERKYSELLDEKKS-LEN 1472
Cdd:pfam15921 195 DFEEASGKKIYEHDSMSTMhfrsLGSAISKILRELDTEISYLKGRIFPVEDQLEAL---KSESQNKIELLLQQHQDrIEQ 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1473 AFSDMKRE-QELDFSAKRLLVQENTtLKYSIEALEEELKKKN-LENQELIACRSDLSDLLKEAQDARRTLENELAAVSHA 1550
Cdd:pfam15921 272 LISEHEVEiTGLTEKASSARSQANS-IQSQLEIIQEQARNQNsMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQ 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1551 KQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTVEKKA-------------------RILDKESFLLER 1611
Cdd:pfam15921 351 LVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQnkrlwdrdtgnsitidhlrRELDDRNMEVQR 430
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1612 MEL------QNNIGFLEKEVEEMREKNKEFLTEKELLVQ---EKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFT 1682
Cdd:pfam15921 431 LEAllkamkSECQGQMERQMAAIQGKNESLEKVSSLTAQlesTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKER 510
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1683 SLSVSKAELEDVHSCVSVMLDELQHKYevTEKEKMELVQ---ENESLHAEWKSLVIineEILKEKEKLSKEYYKLHEKVV 1759
Cdd:pfam15921 511 AIEATNAEITKLRSRVDLKLQELQHLK--NEGDHLRNVQtecEALKLQMAEKDKVI---EILRQQIENMTQLVGQHGRTA 585
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1760 ALLEQTDADFSCRLlvseGKHELLLEEMSNLA----LKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIhqe 1835
Cdd:pfam15921 586 GAMQVEKAQLEKEI----NDRRLELQEFKILKdkkdAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQL--- 658
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1836 kietLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVE-ELKK-----------EFEALKLAAAQKS 1903
Cdd:pfam15921 659 ----LNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQsELEQtrntlksmegsDGHAMKVAMGMQK 734
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1904 Q------QLAALQEENVKLAEELGRSRDEvtsHQKLEEERSVLNNQL-------------LEMKKSlPSNTLRESTLKKE 1964
Cdd:pfam15921 735 QitakrgQIDALQSKIQFLEEAMTNANKE---KHFLKEEKNKLSQELstvateknkmageLEVLRS-QERRLKEKVANME 810
|
730 740 750
....*....|....*....|....*....|....*
gi 2024359618 1965 IDEERASLQksISDTSALITQKDEELEKLRNEITV 1999
Cdd:pfam15921 811 VALDKASLQ--FAECQDIIQRQEQESVRLKLQHTL 843
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
790-1362 |
9.17e-11 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 67.35 E-value: 9.17e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 790 EIQKLSEQLQAAEKQIQNLET------EKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAE 863
Cdd:TIGR04523 41 KLKTIKNELKNKEKELKNLDKnlnkdeEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKN 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 864 NAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKavQLQ 943
Cdd:TIGR04523 121 KLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNK--LLK 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 944 KNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEE 1023
Cdd:TIGR04523 199 LELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQ 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1024 ALKAAQKKND---ELETQAEELKKQAEQ--AKSLSSVLASARKEIELMSDKMR-------DLISEKETLAQERNTLKLEK 1091
Cdd:TIGR04523 279 NNKKIKELEKqlnQLKSEISDLNNQKEQdwNKELKSELKNQEKKLEEIQNQISqnnkiisQLNEQISQLKKELTNSESEN 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1092 ESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKI 1171
Cdd:TIGR04523 359 SEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKN 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1172 TQENDALRSSESTLLQQLKELQANKDA----VDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARN 1247
Cdd:TIGR04523 439 NSEIKDLTNQDSVKELIIKNLDNTRESletqLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKK 518
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1248 QRELLQEVSILTAERDSAQEKDLDLKS---------THIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANEN 1318
Cdd:TIGR04523 519 ISSLKEKIEKLESEKKEKESKISDLEDelnkddfelKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEK 598
|
570 580 590 600
....*....|....*....|....*....|....*....|....*..
gi 2024359618 1319 QALK---LRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEE 1362
Cdd:TIGR04523 599 KDLIkeiEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQ 645
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1741-2040 |
9.91e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.27 E-value: 9.91e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1741 LKEKEKLSKEYYKLHEKVVALLEQTDAdfscrllvsEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQ 1820
Cdd:COG1196 218 LKEELKELEAELLLLKLRELEAELEEL---------EAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1821 TMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAA 1900
Cdd:COG1196 289 EEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1901 QKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTS 1980
Cdd:COG1196 369 EAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAA 448
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1981 ALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSE 2040
Cdd:COG1196 449 EEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLE 508
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
862-1513 |
2.18e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 66.70 E-value: 2.18e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 862 AENAQRAMQVMETKLKEREEREQQLTEA-KVKLENDIAEIMKSSGDSSAQLMKMNDELRLKE----RQLEQIQLELTKAN 936
Cdd:PTZ00121 1178 AEAARKAEEVRKAEELRKAEDARKAEAArKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAeeakKAEEERNNEEIRKF 1257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 937 EKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDqltdMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQ 1016
Cdd:PTZ00121 1258 EEARMAHFARRQAAIKAEEARKADELKKAEEKKKADE----AKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADA 1333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1017 NLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKEtlAQERNTLKLEKESLLS 1096
Cdd:PTZ00121 1334 AKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADE--AKKKAEEDKKKADELK 1411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1097 QHLEMESKILLVQQDREELwTKNEELnseNKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQEND 1176
Cdd:PTZ00121 1412 KAAAAKKKADEAKKKAEEK-KKADEA---KKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADE 1487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1177 ALRSSESTllqQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRviKDKDDVIQRLQSSYDDLARNQREL--LQE 1254
Cdd:PTZ00121 1488 AKKKAEEA---KKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEA--KKADEAKKAEEKKKADELKKAEELkkAEE 1562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1255 VSILTAERDSAQEKDLDLKSTHIALKNEidcllqtnrslqsekemllKSREELCVSLANTANENQALKLRKDemqtelET 1334
Cdd:PTZ00121 1563 KKKAEEAKKAEEDKNMALRKAEEAKKAE-------------------EARIEEVMKLYEEEKKMKAEEAKKA------EE 1617
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1335 EREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQealfASEQRLLAEREELVNENKAVTEKLTKATADA 1414
Cdd:PTZ00121 1618 AKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIK----AAEEAKKAEEDKKKAEEAKKAEEDEKKAAEA 1693
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1415 VLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSElldEKKSLENAFSDMKREQELDFSAKRLLVQE 1494
Cdd:PTZ00121 1694 LKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEE---DKKKAEEAKKDEEEKKKIAHLKKEEEKKA 1770
|
650
....*....|....*....
gi 2024359618 1495 NTTLKYSIEALEEELKKKN 1513
Cdd:PTZ00121 1771 EEIRKEKEAVIEEELDEED 1789
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
558-1161 |
2.25e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 66.24 E-value: 2.25e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 558 EKMAAAGKEHQREMSSLkEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELWKsKLEsAIASHQQ 637
Cdd:PRK03918 165 KNLGEVIKEIKRRIERL-EKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVK-ELE-ELKEEIE 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 638 AMEELKVSFNKGVGAQTAEFAELKTQMEKVKLDYENEMSNLK-LKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKA 716
Cdd:PRK03918 242 ELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKeLKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 717 KLESVEDQhlvemedtlnkLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSE-GKLEIQKLS 795
Cdd:PRK03918 322 EINGIEER-----------IKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRlTGLTPEKLE 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 796 EQLQAAEKQIQNLEtEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSL--------EKELQLLKEKFTsavdgaenaqR 867
Cdd:PRK03918 391 KELEELEKAKEEIE-EEISKITARIGELKKEIKELKKAIEELKKAKGKCpvcgreltEEHRKELLEEYT----------A 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 868 AMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSgdssaQLMKMNDELRLKERQLEQIQLELTKANEKavqLQKNVE 947
Cdd:PRK03918 460 ELKRIEKELKEIEEKERKLRKELRELEKVLKKESELI-----KLKELAEQLKELEEKLKKYNLEELEKKAE---EYEKLK 531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 948 QTAQKAEqSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIK---GFKQNLLDAEEA 1024
Cdd:PRK03918 532 EKLIKLK-GEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKelePFYNEYLELKDA 610
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1025 LKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMS-----DKMRDLISEKETLAQERNTLKLEKESLLSQHL 1099
Cdd:PRK03918 611 EKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEkkyseEEYEELREEYLELSRELAGLRAELEELEKRRE 690
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024359618 1100 EMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEI 1161
Cdd:PRK03918 691 EIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKYKALLKERALSKVGEIASEI 752
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
651-1482 |
3.42e-10 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 65.76 E-value: 3.42e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 651 GAQTAEFAELKTQMEKVKLDYENEMSNLKLKQENEKSQHLK----EIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHL 726
Cdd:pfam02463 161 EAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKlkeqAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERID 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 727 VEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLL----DLAALQKANSEGKLEIQKLSEQLQAAE 802
Cdd:pfam02463 241 LLQELLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKllakEEEELKSELLKLERRKVDDEEKLKESE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 803 KQIQNLETEKVSNLTKELQGKEQKLL---DLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVMETKLKER 879
Cdd:pfam02463 321 KEKKKAEKELKKEKEEIEELEKELKEleiKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELK 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 880 EEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQE 959
Cdd:pfam02463 401 SEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLV 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 960 TLKTHQEELKKMQdqltdmkKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQA 1039
Cdd:pfam02463 481 KLQEQLELLLSRQ-------KLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEV 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1040 EELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKN 1119
Cdd:pfam02463 554 SATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTE 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1120 EELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAV 1199
Cdd:pfam02463 634 LTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELK 713
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1200 DVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLK--STHI 1277
Cdd:pfam02463 714 KLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKveEEKE 793
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1278 ALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLS 1357
Cdd:pfam02463 794 EKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELL 873
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1358 NFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFS 1437
Cdd:pfam02463 874 LKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEEN 953
|
810 820 830 840
....*....|....*....|....*....|....*....|....*
gi 2024359618 1438 KSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQE 1482
Cdd:pfam02463 954 NKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKE 998
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
61-122 |
4.37e-10 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 65.09 E-value: 4.37e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024359618 61 VGERVWVNGNKpGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLRGIFTRP 122
Cdd:COG5244 6 VNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIFIRP 66
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1785-2039 |
5.31e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.08 E-value: 5.31e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1785 EEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNN 1864
Cdd:TIGR02168 253 EELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKL 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1865 LKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQK-----------L 1933
Cdd:TIGR02168 333 DELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNeierlearlerL 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1934 EEERSVLNNQLLEMKKSLPSNTLRE-STLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQS 2012
Cdd:TIGR02168 413 EDRRERLQQEIEELLKKLEEAELKElQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLD 492
|
250 260
....*....|....*....|....*..
gi 2024359618 2013 VVKTLESDKLKLEEKVKNLEQKLKAKS 2039
Cdd:TIGR02168 493 SLERLQENLEGFSEGVKALLKNQSGLS 519
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1622-2036 |
5.48e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 64.70 E-value: 5.48e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1622 EKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVM 1701
Cdd:PRK03918 188 TENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEER 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1702 LDELQHKYEVTEkEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQtdadfscrllvsegkhe 1781
Cdd:PRK03918 268 IEELKKEIEELE-EKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEER----------------- 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1782 llLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLaslensrqtnEKLQNELDMLK 1861
Cdd:PRK03918 330 --IKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTP----------EKLEKELEELE 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1862 QNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEEN-----VKLAEELGRSRDEVtshQKLEEE 1936
Cdd:PRK03918 398 KAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHrkellEEYTAELKRIEKEL---KEIEEK 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1937 RSVLNNQLLEMKKSLpSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKT 2016
Cdd:PRK03918 475 ERKLRKELRELEKVL-KKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEE 553
|
410 420
....*....|....*....|
gi 2024359618 2017 LESDKLKLEEKVKNLEQKLK 2036
Cdd:PRK03918 554 LKKKLAELEKKLDELEEELA 573
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
820-1641 |
6.85e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 64.75 E-value: 6.85e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 820 LQGKEQKLLDLEKNLSAVNQVKDslekelqllKEKF--TSAVDGAENAQRAMQVMETKLKEREEREQQLTE-AKVKLEND 896
Cdd:pfam15921 80 LEEYSHQVKDLQRRLNESNELHE---------KQKFylRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEdLRNQLQNT 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 897 IAEI----------MKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQ-QETLKTHQ 965
Cdd:pfam15921 151 VHELeaakclkedmLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTMHFRSLGSAiSKILRELD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 966 EELKKMQDQLTDMKKQMET----SQNQYKDLQAKYEKETSEMITKHDADIKGFKqnlldaeEALKAAQKKNDELETQAEE 1041
Cdd:pfam15921 231 TEISYLKGRIFPVEDQLEAlkseSQNKIELLLQQHQDRIEQLISEHEVEITGLT-------EKASSARSQANSIQSQLEI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1042 LKKQAEQAKSLSsvlasarkeielmsdkMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEE 1121
Cdd:pfam15921 304 IQEQARNQNSMY----------------MRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQ 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1122 LNSENKKILKQKEAAEAKSRQESTEkVALISEKSKLLSEIETAQADLLkitqenDALRSSESTLLQQLKELQANKDAVDV 1201
Cdd:pfam15921 368 FSQESGNLDDQLQKLLADLHKREKE-LSLEKEQNKRLWDRDTGNSITI------DHLRRELDDRNMEVQRLEALLKAMKS 440
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1202 ACQKHIKER--------EELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQREllqeVSILTAerdSAQEKDLDLK 1273
Cdd:pfam15921 441 ECQGQMERQmaaiqgknESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERT----VSDLTA---SLQEKERAIE 513
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1274 STH---IALKNEIDCLLQTNRSLQSEKEmllksreelcvSLANTANENQALKLRKDEMQTELETEREKLEKMTKdnmdlk 1350
Cdd:pfam15921 514 ATNaeiTKLRSRVDLKLQELQHLKNEGD-----------HLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQ------ 576
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1351 aslsslsnFLEEMKSSREASNSEKIHLLQEalfASEQRLlaEREELvnenkavteKLTKATADAVLAEtaFTEKINELNL 1430
Cdd:pfam15921 577 --------LVGQHGRTAGAMQVEKAQLEKE---INDRRL--ELQEF---------KILKDKKDAKIRE--LEARVSDLEL 632
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1431 EKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKR-----EQELDFSAKRL----------LVQEN 1495
Cdd:pfam15921 633 EKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRnfrnkSEEMETTTNKLkmqlksaqseLEQTR 712
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1496 TTLKySIEALEEELKKKNLENQELIACRSDLSDLLkeaQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTEL 1575
Cdd:pfam15921 713 NTLK-SMEGSDGHAMKVAMGMQKQITAKRGQIDAL---QSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKM 788
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359618 1576 QDKCQKLTGEVENMKENLTVEKKAriLDKESflLERMELQNNIGflEKEVEEMREKNKEFLTEKEL 1641
Cdd:pfam15921 789 AGELEVLRSQERRLKEKVANMEVA--LDKAS--LQFAECQDIIQ--RQEQESVRLKLQHTLDVKEL 848
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
653-1592 |
7.68e-10 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 64.68 E-value: 7.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 653 QTAEFAELKTQMEKVKLDY-----ENEMSNLKLKQENEKSQHLKEI----EALKAKLLEVTEEKEQTLENLKAKLESVED 723
Cdd:TIGR00606 180 SATRYIKALETLRQVRQTQgqkvqEHQMELKYLKQYKEKACEIRDQitskEAQLESSREIVKSYENELDPLKNRLKEIEH 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 724 Q--HLVEMEDTLNKLQE---------AEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLA-ALQKANSEGKLEI 791
Cdd:TIGR00606 260 NlsKIMKLDNEIKALKSrkkqmekdnSELELKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDCQrELEKLNKERRLLN 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 792 QKLSEQLQAAEKQiqnletekvsNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQV 871
Cdd:TIGR00606 340 QEKTELLVEQGRL----------QLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFHTLVIERQEDEAKT 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 872 METKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQ 951
Cdd:TIGR00606 410 AAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSK 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 952 KAEQSQQETLKTHQEELKKMQDQLtDMKKQMETSQNQYKDLQAKYEKETsEMITKHDADikgfkqnllDAEEALKAAQKK 1031
Cdd:TIGR00606 490 AEKNSLTETLKKEVKSLQNEKADL-DRKLRKLDQEMEQLNHHTTTRTQM-EMLTKDKMD---------KDEQIRKIKSRH 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1032 NDELETQAEELKKQaeqaKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILlvqqd 1111
Cdd:TIGR00606 559 SDELTSLLGYFPNK----KQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLF----- 629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1112 rEELWTKNEELNSENKKilkqkeaaeaKSRQESTEKVALISEKSKLLSEIETaqadllKITQENDALRSSESTLLQQLKE 1191
Cdd:TIGR00606 630 -DVCGSQDEESDLERLK----------EEIEKSSKQRAMLAGATAVYSQFIT------QLTDENQSCCPVCQRVFQTEAE 692
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1192 LQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLD 1271
Cdd:TIGR00606 693 LQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQET 772
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1272 LKSThIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLAnTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKA 1351
Cdd:TIGR00606 773 LLGT-IMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQA-AKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRK 850
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1352 SLSSLSNFLEEMKSSREASNSEKIHLLQEAlfaseQRLLAEREELVNENKAVTEkLTKATADAVLAETAFTEKINELNLE 1431
Cdd:TIGR00606 851 LIQDQQEQIQHLKSKTNELKSEKLQIGTNL-----QRRQQFEEQLVELSTEVQS-LIREIKDAKEQDSPLETFLEKDQQE 924
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1432 KESVFSKSlqfEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQeldfsakrlLVQENTTLKYSIEALEEELKK 1511
Cdd:TIGR00606 925 KEELISSK---ETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDY---------LKQKETELNTVNAQLEECEKH 992
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1512 KNLENQELIACRSDLSdllkEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKE 1591
Cdd:TIGR00606 993 QEKINEDMRLMRQDID----TQKIQERWLQDNLTLRKRENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEENIDLIKR 1068
|
.
gi 2024359618 1592 N 1592
Cdd:TIGR00606 1069 N 1069
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
476-1090 |
9.75e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 63.93 E-value: 9.75e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 476 ARIKELEqSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLESSKHIddvdtsLSLLQEISS 555
Cdd:PRK03918 176 RRIERLE-KFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEE------IEELEKELE 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 556 LQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSaSNERMGKENESLKTKLDHANKENSDvIELWKSKLESAIASH 635
Cdd:PRK03918 249 SLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELK-ELKEKAEEYIKLSEFYEEYLDELRE-IEKRLSRLEEEINGI 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 636 QQAMEELKvSFNKGVGAQTAEFAELKTQMEKVKLD---YENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQT-- 710
Cdd:PRK03918 327 EERIKELE-EKEERLEELKKKLKELEKRLEELEERhelYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIee 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 711 -LENLKAKLESVEdQHLVEMEDTLNKLQEAEIKV----KELDVLQAK--CNEQTKLIGSLTQQIRASEEKLLDLAAlQKA 783
Cdd:PRK03918 406 eISKITARIGELK-KEIKELKKAIEELKKAKGKCpvcgRELTEEHRKelLEEYTAELKRIEKELKEIEEKERKLRK-ELR 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 784 NSEGKLEIQ-------KLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQKLLDLEKNLSavnqvkdSLEKELQLLKEkft 856
Cdd:PRK03918 484 ELEKVLKKEseliklkELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIK-------SLKKELEKLEE--- 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 857 savdgaenaqramqvMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDssaqlmkmNDELRLKErqleqiqleLTKAN 936
Cdd:PRK03918 554 ---------------LKKKLAELEKKLDELEEELAELLKELEELGFESVE--------ELEERLKE---------LEPFY 601
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 937 EKAVQLQKnveqtAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMItkhdadikgfKQ 1016
Cdd:PRK03918 602 NEYLELKD-----AEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEEL----------RE 666
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024359618 1017 NLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLE 1090
Cdd:PRK03918 667 EYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKYKALLKER 740
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
979-1810 |
9.82e-10 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 64.22 E-value: 9.82e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 979 KKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLAS 1058
Cdd:pfam02463 176 KKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIES 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1059 ARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEA 1138
Cdd:pfam02463 256 SKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKE 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1139 KSRQESTEKVAL----------ISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIK 1208
Cdd:pfam02463 336 EIEELEKELKELeikreaeeeeEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELAR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1209 EREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQ 1288
Cdd:pfam02463 416 QLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKL 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1289 TNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSRE 1368
Cdd:pfam02463 496 EERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPL 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1369 ASNSeKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEA 1448
Cdd:pfam02463 576 GARK-LRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSL 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1449 LLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELK-KKNLENQELIACRSDLS 1527
Cdd:pfam02463 655 EEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKlEAEELLADRVQEAQDKI 734
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1528 DLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTVEKKARILDKESF 1607
Cdd:pfam02463 735 NEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEA 814
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1608 LLERmELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVS 1687
Cdd:pfam02463 815 ELLE-EEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEE 893
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1688 KAELE----DVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLE 1763
Cdd:pfam02463 894 KEKEEkkelEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELG 973
|
810 820 830 840
....*....|....*....|....*....|....*....|....*..
gi 2024359618 1764 QTDADFSCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFE 1810
Cdd:pfam02463 974 KVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQRLK 1020
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
370-1010 |
1.01e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 64.39 E-value: 1.01e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 370 AERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEAADREKVELLNQLEEEKRKVEDLQFRVEEE 449
Cdd:PTZ00121 1324 AEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEED 1403
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 450 SITKGDLERKRQISEDPENTQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSrimelerdlALRVKEVAE 529
Cdd:PTZ00121 1404 KKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKK---------AEEAKKADE 1474
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 530 LRGRLESSKHIDDVdtslsllqeisslqEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSasnERMGKENESLKTK 609
Cdd:PTZ00121 1475 AKKKAEEAKKADEA--------------KKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKA---DEAKKAEEAKKAD 1537
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 610 LDHANKENSDVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFAElktQMEKVKLDYENEMSNLKLKQENEKSQH 689
Cdd:PTZ00121 1538 EAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAK---KAEEARIEEVMKLYEEEKKMKAEEAKK 1614
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 690 LKEiEALKAKLLEVTEEKEQTLENLKAKL-ESVEDQHLVEMEDTLNKLQEAEIKVKEldvlqakcnEQTKligSLTQQIR 768
Cdd:PTZ00121 1615 AEE-AKIKAEELKKAEEEKKKVEQLKKKEaEEKKKAEELKKAEEENKIKAAEEAKKA---------EEDK---KKAEEAK 1681
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 769 ASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQKlldlEKNLSAVNQVKDSLEKEL 848
Cdd:PTZ00121 1682 KAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEA----EEDKKKAEEAKKDEEEKK 1757
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 849 QLLKEKFTSAVDGAENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQI 928
Cdd:PTZ00121 1758 KIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVAD 1837
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 929 QLELTKANEKAVQLQK------NVEQTAQKAEQSQQETLKTHQEE---LKKMQDQL--TDMKKQMETSQNQYKDLQAKYE 997
Cdd:PTZ00121 1838 SKNMQLEEADAFEKHKfnknneNGEDGNKEADFNKEKDLKEDDEEeieEADEIEKIdkDDIEREIPNNNMAGKNNDIIDD 1917
|
650
....*....|...
gi 2024359618 998 KETSEMITKHDAD 1010
Cdd:PTZ00121 1918 KLDKDEYIKRDAE 1930
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
346-1048 |
1.30e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.93 E-value: 1.30e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 346 RKISGTTALQEALKEKQQHIEQLLAE-----RDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEME------------ 408
Cdd:TIGR02169 251 EELEKLTEEISELEKRLEEIEQLLEElnkkiKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEdaeerlakleae 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 409 -----AKMDQLRAMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESiTKGDLERKRQISEDPENTQTKLEHARIKELEQ 483
Cdd:TIGR02169 331 idkllAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVD-KEFAETRDELKDYREKLEKLKREINELKRELD 409
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 484 SLLFEKTKADKlqrELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLES-SKHIDDVDTSLSLLQ--------EIS 554
Cdd:TIGR02169 410 RLQEELQRLSE---ELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQlAADLSKYEQELYDLKeeydrvekELS 486
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 555 SLQEKMAAAGKEhQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHA--NKENSDV----------IE 622
Cdd:TIGR02169 487 KLQRELAEAEAQ-ARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEVAagNRLNNVVveddavakeaIE 565
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 623 LWKSKLES-----AIASHQQAMEELKVSFNKGVGAQTAEFAELKTQMEK---------------------------VKLD 670
Cdd:TIGR02169 566 LLKRRKAGratflPLNKMRDERRDLSILSEDGVIGFAVDLVEFDPKYEPafkyvfgdtlvvedieaarrlmgkyrmVTLE 645
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 671 YE-NEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQ---TLENLKAKLESVE---DQHLVEMEDTLNKLQEAEikv 743
Cdd:TIGR02169 646 GElFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGlkrELSSLQSELRRIEnrlDELSQELSDASRKIGEIE--- 722
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 744 KELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEgklEIQKLSEQLQAAEKQIQNLET----EKVSNLTKE 819
Cdd:TIGR02169 723 KEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEA---RIEELEEDLHKLEEALNDLEArlshSRIPEIQAE 799
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 820 LQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKftsavdgAENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAE 899
Cdd:TIGR02169 800 LSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKE-------IQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEE 872
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 900 IMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQtaqkaeqsQQETLKTHQEELKKMQDQLTDMK 979
Cdd:TIGR02169 873 LEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSE--------LKAKLEALEEELSEIEDPKGEDE 944
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359618 980 KQMETSQNqYKDLQAKYEKETSEMITKHDADIKGFkQNLLDAEEALKAAQKKNDELETQAEELKKQAEQ 1048
Cdd:TIGR02169 945 EIPEEELS-LEDVQAELQRVEEEIRALEPVNMLAI-QEYEEVLKRLDELKEKRAKLEEERKAILERIEE 1011
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1291-1877 |
1.42e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 63.54 E-value: 1.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1291 RSLQSEKEMLLKSREELCVSLANTANenqaLKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREAS 1370
Cdd:PRK03918 165 KNLGEVIKEIKRRIERLEKFIKRTEN----IEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEI 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1371 NSEKIHLLQ-EALFASEQRLLAEREELVNENKAVTEKLT---------KATADAVLAETAFTEKINELNLEKESVFSKSL 1440
Cdd:PRK03918 241 EELEKELESlEGSKRKLEEKIRELEERIEELKKEIEELEekvkelkelKEKAEEYIKLSEFYEEYLDELREIEKRLSRLE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1441 QFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENttlKYSIEALEEELKKKNLENQELI 1520
Cdd:PRK03918 321 EEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELE---RLKKRLTGLTPEKLEKELEELE 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1521 ACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSsdieILNRERTELQDK--CQKLTGEVENMKENL-TVEK 1597
Cdd:PRK03918 398 KAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCP----VCGRELTEEHRKelLEEYTAELKRIEKELkEIEE 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1598 KARILDKESFLLER-MELQNNIGFLEKEVEEMREKNKEFlteKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQ 1676
Cdd:PRK03918 474 KERKLRKELRELEKvLKKESELIKLKELAEQLKELEEKL---KKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEK 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1677 LKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLhE 1756
Cdd:PRK03918 551 LEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEEL-D 629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1757 KVVALLEQTDADF-SCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIhQE 1835
Cdd:PRK03918 630 KAFEELAETEKRLeELRKELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEER-EK 708
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 2024359618 1836 KIETLASLENSRQTNEKLQNELDMLKqnNLKNEEELTKSKEL 1877
Cdd:PRK03918 709 AKKELEKLEKALERVEELREKVKKYK--ALLKERALSKVGEI 748
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
352-900 |
1.71e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 63.42 E-value: 1.71e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 352 TALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRdghdRHVLEMEAKMDQLRAMVEAADREKVELLNQ 431
Cdd:COG1196 284 EEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELE----EELEELEEELEELEEELEEAEEELEEAEAE 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 432 LEEEKRKVEDLQFRVEEESitkGDLERKRQISEDPENTQTKLEhARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKS 511
Cdd:COG1196 360 LAEAEEALLEAEAELAEAE---EELEELAEELLEALRAAAELA-AQLEELEEAEEALLERLERLEEELEELEEALAELEE 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 512 RIMELERDLALRVKEVAElrgrlesskhiddvdtslsLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKT 591
Cdd:COG1196 436 EEEEEEEALEEAAEEEAE-------------------LEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLL 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 592 LSASNERMGKENESLKTKLDHANKENS---DVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFAeLKTQMEKVK 668
Cdd:COG1196 497 LEAEADYEGFLEGVKAALLLAGLRGLAgavAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYL-KAAKAGRAT 575
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 669 LDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENlkAKLESVEDQHLVEMEDTLNKLQEAEIKVKELD- 747
Cdd:COG1196 576 FLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGD--TLLGRTLVAARLEAALRRAVTLAGRLREVTLEg 653
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 748 --VLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQ 825
Cdd:COG1196 654 egGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAE 733
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 826 KLLDLEKNLSAVNQVKDSLEKELQLLkEKFTSAVDGAENAQRAMQVMET----------KLKER----EEREQQLTEAKV 891
Cdd:COG1196 734 REELLEELLEEEELLEEEALEELPEP-PDLEELERELERLEREIEALGPvnllaieeyeELEERydflSEQREDLEEARE 812
|
....*....
gi 2024359618 892 KLENDIAEI 900
Cdd:COG1196 813 TLEEAIEEI 821
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
790-997 |
2.33e-09 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 62.73 E-value: 2.33e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 790 EIQKLSEQLQAAEKQIQNL-ETEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRA 868
Cdd:COG3206 183 QLPELRKELEEAEAALEEFrQKNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQS 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 869 MQVmetklkereereQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQ 948
Cdd:COG3206 263 PVI------------QQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRILASLEAELEALQAREA 330
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 2024359618 949 TAQKAEQSQQETLKthqeELKKMQDQLTDMKKQMETSQNQYKDLQAKYE 997
Cdd:COG3206 331 SLQAQLAQLEARLA----ELPELEAELRRLEREVEVARELYESLLQRLE 375
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
944-1520 |
3.54e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 61.96 E-value: 3.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 944 KNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAK------YEKETSEMITKHDADIKGFKQN 1017
Cdd:TIGR04523 25 KNIANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKikileqQIKDLNDKLKKNKDKINKLNSD 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1018 LLDAEEALKAAQKKNDELETQAEELKKQAEQAKSL----SSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKES 1093
Cdd:TIGR04523 105 LSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNidkfLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLN 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1094 LLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEaaeaKSRQESTEKVALISEKSKLLSEIETAQADLLKITQ 1173
Cdd:TIGR04523 185 IQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKK----QNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKD 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1174 ENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREEL--EHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQREL 1251
Cdd:TIGR04523 261 EQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLnnQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQL 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1252 LQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTE 1331
Cdd:TIGR04523 341 NEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQE 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1332 LETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEalfaseqrlLAEREELVNENKAVTEKLTKAT 1411
Cdd:TIGR04523 421 KELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQ---------LKVLSRSINKIKQNLEQKQKEL 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1412 ADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRL- 1490
Cdd:TIGR04523 492 KSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENLEKEIDEKNKEIe 571
|
570 580 590
....*....|....*....|....*....|.
gi 2024359618 1491 -LVQENTTLKYSIEALEEELKKKNLENQELI 1520
Cdd:TIGR04523 572 eLKQTQKSLKKKQEEKQELIDQKEKEKKDLI 602
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
702-1469 |
3.75e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 62.39 E-value: 3.75e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 702 EVTEEKEQTLENLKAKLESVEDQHLVEME--DTLNKLQEAEIKVKELDVLQAKCN--EQTKLIGSLTQQIRASEEKLLDL 777
Cdd:TIGR02169 167 EFDRKKEKALEELEEVEENIERLDLIIDEkrQQLERLRREREKAERYQALLKEKReyEGYELLKEKEALERQKEAIERQL 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 778 AALQKANSEGKLEIQKLSEQLQAAEKQIQNLeTEKVSNLTKELQGKEQ-KLLDLEKNLSAVNQVKDSLEKELQLLKEKFT 856
Cdd:TIGR02169 247 ASLEEELEKLTEEISELEKRLEEIEQLLEEL-NKKIKDLGEEEQLRVKeKIGELEAEIASLERSIAEKERELEDAEERLA 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 857 SAVDGAENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKAN 936
Cdd:TIGR02169 326 KLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELK 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 937 EKAVQLQKNVEQTAQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEmitkhdadIKGFKQ 1016
Cdd:TIGR02169 406 RELDRLQEELQRLSEELADLNAA-IAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQE--------LYDLKE 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1017 NLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLAS-------------------------------------- 1058
Cdd:TIGR02169 477 EYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKAsiqgvhgtvaqlgsvgeryataievaagnrlnnvvved 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1059 ---ARKEIELMSD------------KMRDLISEKETLAQER------NTLKLEKE-----------SLLSQHLEMESKIL 1106
Cdd:TIGR02169 557 davAKEAIELLKRrkagratflplnKMRDERRDLSILSEDGvigfavDLVEFDPKyepafkyvfgdTLVVEDIEAARRLM 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1107 lvqqDREELWTKNEELNSENKKIL---KQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSES 1183
Cdd:TIGR02169 637 ----GKYRMVTLEGELFEKSGAMTggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELS 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1184 TLLQQLKELQANKDAVDvacQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARN------------QREL 1251
Cdd:TIGR02169 713 DASRKIGEIEKEIEQLE---QEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDlhkleealndleARLS 789
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1252 LQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTE 1331
Cdd:TIGR02169 790 HSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEE 869
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1332 LE-------TEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNsEKIHLLQEALFASEQRL-----LAEREELVNE 1399
Cdd:TIGR02169 870 LEeleaalrDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKR-KRLSELKAKLEALEEELseiedPKGEDEEIPE 948
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024359618 1400 NKAVTEKLtKATADAVLAETAFTEKINELNLEK-ESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKS 1469
Cdd:TIGR02169 949 EELSLEDV-QAELQRVEEEIRALEPVNMLAIQEyEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKRE 1018
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
759-1013 |
4.90e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 60.55 E-value: 4.90e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 759 LIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLEtEKVSNLTKELQGKEQKLLDLEKNLSAVN 838
Cdd:COG4942 11 LALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALE-RRIAALARRIRALEQELAALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 839 QVKDSLEKELQLLKEKFTSAVDgaeNAQRAMQVMETKLKEREEREQQLteakVKLENDIAEIMKSSGDSSAQLMKMNDEL 918
Cdd:COG4942 90 KEIAELRAELEAQKEELAELLR---ALYRLGRQPPLALLLSPEDFLDA----VRRLQYLKYLAPARREQAEELRADLAEL 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 919 RLKERQLEQIQLELtkanEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEK 998
Cdd:COG4942 163 AALRAELEAERAEL----EALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
250
....*....|....*
gi 2024359618 999 ETSEMITKHDADIKG 1013
Cdd:COG4942 239 AAERTPAAGFAALKG 253
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
517-1230 |
6.66e-09 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 61.39 E-value: 6.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 517 ERDLALRVKEVAElrgrlESSKHIDDVDTSLSLLQEISSLQEKMaaagKEHQREMSSLKEKFESSEEALRKEIKTLSAS- 595
Cdd:pfam12128 229 DIQAIAGIMKIRP-----EFTKLQQEFNTLESAELRLSHLHFGY----KSDETLIASRQEERQETSAELNQLLRTLDDQw 299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 596 NERMGKENESLKT-KLDHANKENS-DVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFAELKTQMEKVKLDYEN 673
Cdd:pfam12128 300 KEKRDELNGELSAaDAAVAKDRSElEALEDQHGAFLDADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNR 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 674 EMSNLKlkqenekSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVK----ELDVL 749
Cdd:pfam12128 380 RRSKIK-------EQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQALESELREQLEAGKLEFNEEEYRLKsrlgELKLR 452
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 750 QAkcneqtkligsltqQIRASEEKLLDLAALQKansegklEIQKLSEQLQAAEKQIQNLETE------KVSNLTKELQGK 823
Cdd:pfam12128 453 LN--------------QATATPELLLQLENFDE-------RIERAREEQEAANAEVERLQSElrqarkRRDQASEALRQA 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 824 EQKLLDLEKNLSAVNQV-------------------KDSLEKEL---QLLKEKFTSAVDGAENAQRA------MQVMETK 875
Cdd:pfam12128 512 SRRLEERQSALDELELQlfpqagtllhflrkeapdwEQSIGKVIspeLLHRTDLDPEVWDGSVGGELnlygvkLDLKRID 591
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 876 LKEREEREQQLTEAKVKLENDI-------AEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQ 948
Cdd:pfam12128 592 VPEWAASEEELRERLDKAEEALqsarekqAAAEEQLVQANGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNK 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 949 TAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMetsQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAA 1028
Cdd:pfam12128 672 ALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQ---KEQKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAE 748
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1029 QKkndELETQ-AEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILL 1107
Cdd:pfam12128 749 LK---ALETWyKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAISE 825
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1108 VQQDreeLWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSeietaqadlLKITQENDALRSSESTLLQ 1187
Cdd:pfam12128 826 LQQQ---LARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLAT---------LKEDANSEQAQGSIGERLA 893
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|...
gi 2024359618 1188 QLKELQANKDAVDVACQKHI---------KEREEL-EHYQKlLEENDRVIKDK 1230
Cdd:pfam12128 894 QLEDLKLKRDYLSESVKKYVehfknviadHSGSGLaETWES-LREEDHYQNDK 945
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
810-1060 |
7.16e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 60.16 E-value: 7.16e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 810 TEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVMETKLKEREEREQQLTEA 889
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 890 KVKLENDIAEImkssgdssaqlmkmndeLRLKERQLEQIQLELTKANEKAVQLQKNVE--QTAQKAEQSQQETLKTHQEE 967
Cdd:COG4942 99 LEAQKEELAEL-----------------LRALYRLGRQPPLALLLSPEDFLDAVRRLQylKYLAPARREQAEELRADLAE 161
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 968 LKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEmitkHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAE 1047
Cdd:COG4942 162 LAALRAELEAERAELEALLAELEEERAALEALKAE----RQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAA 237
|
250
....*....|...
gi 2024359618 1048 QAKSLSSVLASAR 1060
Cdd:COG4942 238 AAAERTPAAGFAA 250
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
489-1137 |
7.61e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 61.19 E-value: 7.61e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 489 KTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLESSKhiddvDTSLSLLQEISSLQEKMAAAGKEHQ 568
Cdd:TIGR04523 123 EVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELE-----NELNLLEKEKLNIQKNIDKIKNKLL 197
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 569 RemsslKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKEnsdvielwKSKLESAIASHQQAMEELKVSFNK 648
Cdd:TIGR04523 198 K-----LELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQE--------INEKTTEISNTQTQLNQLKDEQNK 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 649 GVGAQTAEFAELKTQMEKVK------LDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTE----EKEQTLENLKAKL 718
Cdd:TIGR04523 265 IKKQLSEKQKELEQNNKKIKelekqlNQLKSEISDLNNQKEQDWNKELKSELKNQEKKLEEIQnqisQNNKIISQLNEQI 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 719 ESVEDQHLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLaalQKANSEGKLEIQKLSEQL 798
Cdd:TIGR04523 345 SQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQ---EKLNQQKDEQIKKLQQEK 421
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 799 QAAEKQIQNLETEKVSNlTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVMETKLKE 878
Cdd:TIGR04523 422 ELLEKEIERLKETIIKN-NSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKELKK 500
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 879 REEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEqtaqkaeqsqQ 958
Cdd:TIGR04523 501 LNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKENLEKEIDEKNKE----------I 570
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 959 ETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMitkhdadikgfkqnlldaEEALKAAQKKNDELETQ 1038
Cdd:TIGR04523 571 EELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSL------------------EKELEKAKKENEKLSSI 632
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1039 AEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTK 1118
Cdd:TIGR04523 633 IKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESKTKIDDIIELMKDWLKELSLHYKKYITRMIRIKDLPKLEEK 712
|
650
....*....|....*....
gi 2024359618 1119 NEELNSENKKILKQKEAAE 1137
Cdd:TIGR04523 713 YKEIEKELKKLDEFSKELE 731
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1565-2086 |
9.28e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 60.85 E-value: 9.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1565 IEILNRERTELQDKCQKlTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMrEKNKEFLTEKELLVQ 1644
Cdd:PRK03918 171 IKEIKRRIERLEKFIKR-TENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKEL-EELKEEIEELEKELE 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1645 EKEKSETKLEEVIK--EKMI--LYKETEQLASKIEQLKS------DFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEK 1714
Cdd:PRK03918 249 SLEGSKRKLEEKIRelEERIeeLKKEIEELEEKVKELKElkekaeEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEE 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1715 EkmelVQENESLHAEWKSLVIINEEILKEKEKLsKEYYKLHEKVVALLEQTD---ADFSCR--------LLVSEGKHELL 1783
Cdd:PRK03918 329 R----IKELEEKEERLEELKKKLKELEKRLEEL-EERHELYEEAKAKKEELErlkKRLTGLtpeklekeLEELEKAKEEI 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1784 LEEMSNLALKLREIERLQAQ--TFMQKFEADKRA----------EEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNE 1851
Cdd:PRK03918 404 EEEISKITARIGELKKEIKElkKAIEELKKAKGKcpvcgrelteEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELR 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1852 KLQNELdmlkqnnlKNEEELTKSKELL----NLENK-------KVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEEL 1920
Cdd:PRK03918 484 ELEKVL--------KKESELIKLKELAeqlkELEEKlkkynleELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELK 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1921 GRSRDEVTSHQKLEEERSVLNNQLLEMK-KSLPSNTLRESTLK---------KEIDEERASLQKSISDTSALITQKDEEL 1990
Cdd:PRK03918 556 KKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKELEpfyneylelKDAEKELEREEKELKKLEEELDKAFEEL 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1991 EKLRNEITVLRGENASAKTLQSV--VKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSGDIAANLlqdESAEDKQQE 2068
Cdd:PRK03918 636 AETEKRLEELRKELEELEKKYSEeeYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEEL---EEREKAKKE 712
|
570
....*....|....*...
gi 2024359618 2069 IDFLNSVIVDLQRRNEEL 2086
Cdd:PRK03918 713 LEKLEKALERVEELREKV 730
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
915-1147 |
9.92e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 59.78 E-value: 9.92e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 915 NDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQE------TLKTHQEELKKMQDQLTDMKKQMETSQNQ 988
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRiaalarRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 989 YKDLQAKYEKETSEMITKHDADIKGF---KQNLLDAEEALKAAQKKNDELETQAEELKKQAEQakslssvLASARKEIEL 1065
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAE-------LAALRAELEA 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1066 MSDKMRDLISEKETLAQERNTLKLEKESLLSQhleMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQEST 1145
Cdd:COG4942 172 ERAELEALLAELEEERAALEALKAERQKLLAR---LEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGF 248
|
..
gi 2024359618 1146 EK 1147
Cdd:COG4942 249 AA 250
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
953-1198 |
1.03e-08 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 60.42 E-value: 1.03e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 953 AEQSQQETLKTHQEELKK----MQDQLTDMKKQMETSQNQYKDLQAKYeketsemitkhdadikgfkqNLLDAEEALKAA 1028
Cdd:COG3206 158 AEAYLEQNLELRREEARKalefLEEQLPELRKELEEAEAALEEFRQKN--------------------GLVDLSEEAKLL 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1029 QKKNDELETQAEELKKQAEQAKSLssvLASARKEIELMSDKMRDLISEKE--TLAQERNTLKLEKESLLSQHLEMESKIL 1106
Cdd:COG3206 218 LQQLSELESQLAEARAELAEAEAR---LAALRAQLGSGPDALPELLQSPViqQLRAQLAELEAELAELSARYTPNHPDVI 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1107 LVQQDREELwtkNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLL 1186
Cdd:COG3206 295 ALRAQIAAL---RAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLL 371
|
250
....*....|..
gi 2024359618 1187 QQLKELQANKDA 1198
Cdd:COG3206 372 QRLEEARLAEAL 383
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1564-1921 |
1.14e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.72 E-value: 1.14e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1564 DIEILNRERTELQDKCQKLTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLV 1643
Cdd:COG1196 187 NLERLEDILGELERQLEPLERQAEKAERYRELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1644 QEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVhscvsvmLDELQHKYEVTEKEKMELVQEN 1723
Cdd:COG1196 267 AELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEER-------LEELEEELAELEEELEELEEEL 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1724 ESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQTDAdfscrllvsegkhelLLEEMSNLALKLREIERLQAQ 1803
Cdd:COG1196 340 EELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEE---------------LAEELLEALRAAAELAAQLEE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1804 TFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENK 1883
Cdd:COG1196 405 LEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLE 484
|
330 340 350
....*....|....*....|....*....|....*...
gi 2024359618 1884 KVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELG 1921
Cdd:COG1196 485 ELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGL 522
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
702-1605 |
1.29e-08 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 60.57 E-value: 1.29e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 702 EVTEEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQEAEIKVKE-LDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAA- 779
Cdd:pfam01576 5 EEMQAKEEELQKVKERQQKAESE-LKELEKKHQQLCEEKNALQEqLQAETELCAEAEEMRARLAARKQELEEILHELESr 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 780 ----------LQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVSNLTKeLQGKEQKLLDLEKNLSAVNQVKDSLEKELQ 849
Cdd:pfam01576 84 leeeeersqqLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAK-IKKLEEDILLLEDQNSKLSKERKLLEERIS 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 850 LLKEKFTSAVDGAENAQR-------AMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKE 922
Cdd:pfam01576 163 EFTSNLAEEEEKAKSLSKlknkheaMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKE 242
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 923 RQLEQIQLELTKANEKAVQLQKNV-EQTAQKAEqsQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKEtS 1001
Cdd:pfam01576 243 EELQAALARLEEETAQKNNALKKIrELEAQISE--LQEDLESERAARNKAEKQRRDLGEELEALKTELEDTLDTTAAQ-Q 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1002 EMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQA-EELKKQAEQAKSLSSVLASARKEIElmsDKMRDLISEKETL 1080
Cdd:pfam01576 320 ELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQAlEELTEQLEQAKRNKANLEKAKQALE---SENAELQAELRTL 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1081 AQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSE------------NKKILKQKEAAEAKSR------- 1141
Cdd:pfam01576 397 QQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSElesvssllneaeGKNIKLSKDVSSLESQlqdtqel 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1142 --QESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQL----KELQANKDAVDVACQKHIKEREELEH 1215
Cdd:pfam01576 477 lqEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLsdmkKKLEEDAGTLEALEEGKKRLQRELEA 556
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1216 YQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSIL---------------------TAERDSAQEKDLDLKS 1274
Cdd:pfam01576 557 LTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLekkqkkfdqmlaeekaisaryAEERDRAEAEAREKET 636
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1275 THIALKNEIDCLL-------QTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNM 1347
Cdd:pfam01576 637 RALSLARALEEALeakeeleRTNKQLRAEMEDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQLEELEDELQATEDAKL 716
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1348 DLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAER-------------EELVNENKAVTEKLTKATADA 1414
Cdd:pfam01576 717 RLEVNMQALKAQFERDLQARDEQGEEKRRQLVKQVRELEAELEDERkqraqavaakkklELDLKELEAQIDAANKGREEA 796
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1415 V-------LAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSA 1487
Cdd:pfam01576 797 VkqlkklqAQMKDLQRELEEARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDELADEIASGASG 876
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1488 KRLLVQENTTLKYSIEALEEELKKKNLeNQELiacrsdLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTcssdiei 1567
Cdd:pfam01576 877 KSALQDEKRRLEARIAQLEEELEEEQS-NTEL------LNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQ------- 942
|
970 980 990
....*....|....*....|....*....|....*...
gi 2024359618 1568 LNRERTELQDKCQKLTGEVENMKENLTVEKKARILDKE 1605
Cdd:pfam01576 943 LERQNKELKAKLQEMEGTVKSKFKSSIAALEAKIAQLE 980
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1790-2068 |
1.51e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.34 E-value: 1.51e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1790 LALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEE 1869
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1870 ELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVtshQKLEEERSVLNNQLLEMKK 1949
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEEL---EEAEAELAEAEEALLEAEA 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1950 SLPSNTLRESTLKKEIDE---ERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEE 2026
Cdd:COG1196 373 ELAEAEEELEELAEELLEalrAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEA 452
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2024359618 2027 KVKNLEQKLKAKSEQPLTVTsPSGDIAANLLQDESAEDKQQE 2068
Cdd:COG1196 453 ELEEEEEALLELLAELLEEA-ALLEAALAELLEELAEAAARL 493
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
472-1338 |
1.93e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 59.99 E-value: 1.93e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 472 KLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLES--SKHIDDVDTSLSL 549
Cdd:pfam02463 169 RKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKlnEERIDLLQELLRD 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 550 LQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSdVIELWKSKLE 629
Cdd:pfam02463 249 EQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLK-ESEKEKKKAE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 630 SAIASHQQAMEELKVSfNKGVGAQTAEFAELKTQMEKVKLDYENEMSNLKLKQEnEKSQHLKEIEALKAKLLEVTEEKEQ 709
Cdd:pfam02463 328 KELKKEKEEIEELEKE-LKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKK-LESERLSSAAKLKEEELELKSEEEK 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 710 TLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKL 789
Cdd:pfam02463 406 EAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQ 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 790 EIQKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELqllkekfTSAVDGAENAQRAM 869
Cdd:pfam02463 486 LELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVA-------ISTAVIVEVSATAD 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 870 QVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSgdSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQT 949
Cdd:pfam02463 559 EVEERQKLVRALTELPLGARKLRLLIPKLKLPLKS--IAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTK 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 950 AQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKH--DADIKGFKQNLLDAEEALKA 1027
Cdd:pfam02463 637 LKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEIlrRQLEIKKKEQREKEELKKLK 716
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1028 AQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILL 1107
Cdd:pfam02463 717 LEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKL 796
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1108 VQQDREElwtknEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALrSSESTLLQ 1187
Cdd:pfam02463 797 KAQEEEL-----RALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEE-ITKEELLQ 870
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1188 QLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQE 1267
Cdd:pfam02463 871 ELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEK 950
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024359618 1268 KDLDLKSTHIALKneidcLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREK 1338
Cdd:pfam02463 951 EENNKEEEEERNK-----RLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETC 1016
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
353-1097 |
2.07e-08 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 59.99 E-value: 2.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 353 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEAADREKVELLNQL 432
Cdd:pfam02463 272 KENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKR 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 433 EEEKRKVEDLQFRVEEESITKGDLERKRQISEDPENTQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSR 512
Cdd:pfam02463 352 EAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEI 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 513 IMELERDLALRVKEVAELRGRLESSKHIDDVDTsLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSeeALRKEIKTL 592
Cdd:pfam02463 432 LEEEEESIELKQGKLTEEKEELEKQELKLLKDE-LELKKSEDLLKETQLVKLQEQLELLLSRQKLEERS--QKESKARSG 508
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 593 SASNERMGKENESLKTKLDHANKENsdvIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFAELKTQMEKVKLDYE 672
Cdd:pfam02463 509 LKVLLALIKDGVGGRIISAHGRLGD---LGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIP 585
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 673 NEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTL--ENLKAKLESVEDQHLVEMEDTLNKLQEAEIK---VKELD 747
Cdd:pfam02463 586 KLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVveGILKDTELTKLKESAKAKESGLRKGVSLEEGlaeKSEVK 665
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 748 VLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQKL 827
Cdd:pfam02463 666 ASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKI 745
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 828 LDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVME--TKLKEREEREqqltEAKVKLENDIAEIMKSSG 905
Cdd:pfam02463 746 DEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEkeEKLKAQEEEL----RALEEELKEEAELLEEEQ 821
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 906 DSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNV----EQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQ 981
Cdd:pfam02463 822 LLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEitkeELLQELLLKEEELEEQKLKDELESKEEKEKEEKKE 901
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 982 METSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARK 1061
Cdd:pfam02463 902 LEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIE 981
|
730 740 750
....*....|....*....|....*....|....*.
gi 2024359618 1062 EIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQ 1097
Cdd:pfam02463 982 EFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQ 1017
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
670-1396 |
3.05e-08 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 59.32 E-value: 3.05e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 670 DYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKA----KLESVEDQHLVEMEDTLNKLQEAEIKVKE 745
Cdd:COG5022 814 SYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRfsllKKETIYLQSAQRVELAERQLQELKIDVKS 893
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 746 LDVLQAKCNEQTKLIGSLTQQIRASEEKlldlaalqkansegklEIQKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQ 825
Cdd:COG5022 894 ISSLKLVNLELESEIIELKKSLSSDLIE----------------NLEFKTELIARLKKLLNNIDLEEGPSIEYVKLPELN 957
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 826 KLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSG 905
Cdd:COG5022 958 KLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVAELQSASKIISS 1037
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 906 DSSAqlmkmndelrlkerqleqiqleltKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLtdmkKQMETS 985
Cdd:COG5022 1038 ESTE------------------------LSILKPLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKQL----YQLEST 1089
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 986 QNQYKDLQAKyeketsemitkhdaDIKGFKQNLLDAEEAL---KAAQKKNDELetqaEELKKQAEQAKSLSSVLASARKE 1062
Cdd:COG5022 1090 ENLLKTINVK--------------DLEVTNRNLVKPANVLqfiVAQMIKLNLL----QEISKFLSQLVNTLEPVFQKLSV 1151
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1063 IELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQdrEELWTKNEELNSENKKILKQkeaaeAKSRQ 1142
Cdd:COG5022 1152 LQLELDGLFWEANLEALPSPPPFAALSEKRLYQSALYDEKSKLSSSEV--NDLKNELIALFSKIFSGWPR-----GDKLK 1224
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1143 ESTEKVALISEKSKLLSEIEtaQADLLKITQENdalRSSEStLLQQLKELQankdavDVACQKHIKEREELEHYQKLLEE 1222
Cdd:COG5022 1225 KLISEGWVPTEYSTSLKGFN--NLNKKFDTPAS---MSNEK-LLSLLNSID------NLLSSYKLEEEVLPATINSLLQY 1292
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1223 NDrvikdkddviqrlQSSYDDLARNQRELLQEVSiLTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEML-- 1300
Cdd:COG5022 1293 IN-------------VGLFNALRTKASSLRWKSA-TEVNYNSEELDDWCREFEISDVDEELEELIQAVKVLQLLKDDLnk 1358
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1301 LKSREELCVSLANTanENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSnFLEEMKSSREASNSEKIHLLQE 1380
Cdd:COG5022 1359 LDELLDACYSLNPA--EIQNLKSRYDPADKENNLPKEILKKIEALLIKQELQLSLEG-KDETEVHLSEIFSEEKSLISLD 1435
|
730
....*....|....*.
gi 2024359618 1381 ALFASEQRLLAEREEL 1396
Cdd:COG5022 1436 RNSIYKEEVLSSLSAL 1451
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
515-1196 |
3.26e-08 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 59.07 E-value: 3.26e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 515 ELERDLALRVKEVAELRGRLESSKHIDDVDTSLSL----LQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIK 590
Cdd:pfam10174 40 ELKKERALRKEEAARISVLKEQYRVTQEENQHLQLtiqaLQDELRAQRDLNQLLQQDFTTSPVDGEDKFSTPELTEENFR 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 591 TLSASNERMGKENESLKTKLDHANKEnsdvIELWKSKLESAIASHQQAMEELK--------VSFNKGVGAQTAEfAELKT 662
Cdd:pfam10174 120 RLQSEHERQAKELFLLRKTLEEMELR----IETQKQTLGARDESIKKLLEMLQskglpkksGEEDWERTRRIAE-AEMQL 194
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 663 QMEKVKLDyENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIK 742
Cdd:pfam10174 195 GHLEVLLD-QKEKENIHLREELHRRNQLQPDPAKTKALQTVIEMKDTKISSLERNIRDLEDEVQMLKTNGLLHTEDREEE 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 743 VKELDVLQAKCNEQTKLIGSLTQQIRASEEKLL----DLAALQKANSEGKLEIQKLSEQLQAAE---------------- 802
Cdd:pfam10174 274 IKQMEVYKSHSKFMKNKIDQLKQELSKKESELLalqtKLETLTNQNSDCKQHIEVLKESLTAKEqraailqtevdalrlr 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 803 ------------KQIQNLETEK------VSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAEN 864
Cdd:pfam10174 354 leekesflnkktKQLQDLTEEKstlageIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAGLKERVKSLQTDSSN 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 865 AQRAMQVMETKLKEREE-----REQQLTEAKVKLEnDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELT------ 933
Cdd:pfam10174 434 TDTALTTLEEALSEKERiierlKEQREREDRERLE-ELESLKKENKDLKEKVSALQPELTEKESSLIDLKEHASslassg 512
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 934 -KANEKAVQLQKNVEQTAQKAEQSQQETLKTHQ-EELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEM--ITKHDA 1009
Cdd:pfam10174 513 lKKDSKLKSLEIAVEQKKEECSKLENQLKKAHNaEEAVRTNPEINDRIRLLEQEVARYKEESGKAQAEVERLlgILREVE 592
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1010 DIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSsVLASARKEIELMSDKMRDLISEKETLAQERNTLKL 1089
Cdd:pfam10174 593 NEKNDKDKKIAELESLTLRQMKEQNKKVANIKHGQQEMKKKGAQ-LLEEARRREDNLADNSQQLQLEELMGALEKTRQEL 671
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1090 EkesllsqhlEMESKILLVQQDREELWTKNEELNSENKKILKqkEAAEAKsrQESTekVALISEKSKLLSEIETAQADLL 1169
Cdd:pfam10174 672 D---------ATKARLSSTQQSLAEKDGHLTNLRAERRKQLE--EILEMK--QEAL--LAAISEKDANIALLELSSSKKK 736
|
730 740
....*....|....*....|....*..
gi 2024359618 1170 KITQENDALRSSESTLLQQLKELQANK 1196
Cdd:pfam10174 737 KTQEEVMALKREKDRLVHQLKQQTQNR 763
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
427-1261 |
4.43e-08 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 58.90 E-value: 4.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 427 ELLNQLEEEKRKVED-LQFRVEEESITKGDLERKRQISEDPENTQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVA 505
Cdd:TIGR00606 210 KYLKQYKEKACEIRDqITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELE 289
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 506 TVSEKSRIMELErdlalRVKEVAELRGRLESSKHiddvdtslsllQEISSLQEKMAAAGKEhQREMSSLKEKFESSEEAL 585
Cdd:TIGR00606 290 LKMEKVFQGTDE-----QLNDLYHNHQRTVREKE-----------RELVDCQRELEKLNKE-RRLLNQEKTELLVEQGRL 352
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 586 RKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELwksKLESAIASHQQAMEELKVSFNKGVgaqtAEFAELKTQME 665
Cdd:TIGR00606 353 QLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSER---QIKNFHTLVIERQEDEAKTAAQLC----ADLQSKERLKQ 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 666 KVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTE---------EKEQTLENLKAKLESVEDQHLVEMEdtlnKL 736
Cdd:TIGR00606 426 EQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQlegssdrilELDQELRKAERELSKAEKNSLTETL----KK 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 737 QEAEIKVKELDVLQAKCNEQTKL------IGSLTQQIRASEEKLLDLAALQKANSEGKL--------------------- 789
Cdd:TIGR00606 502 EVKSLQNEKADLDRKLRKLDQEMeqlnhhTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDeltsllgyfpnkkqledwlhs 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 790 ---EIQKLSEQLQAAEKQIQNLETEKvSNLTKELQGKEQKLLDLEKNLSAVNQVKDsLEKELQLLKEKFTSAVDGAENAQ 866
Cdd:TIGR00606 582 kskEINQTRDRLAKLNKELASLEQNK-NHINNELESKEEQLSSYEDKLFDVCGSQD-EESDLERLKEEIEKSSKQRAMLA 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 867 RAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQ------------------I 928
Cdd:TIGR00606 660 GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKkekrrdemlglapgrqsiI 739
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 929 QLELTKANEKAVQLQK-NVEQTAQKAEQSQQET-LKTHQEELKKMQDQLTDMKKqMETSQNQYKDLQAKYEKETSEMITK 1006
Cdd:TIGR00606 740 DLKEKEIPELRNKLQKvNRDIQRLKNDIEEQETlLGTIMPEEESAKVCLTDVTI-MERFQMELKDVERKIAQQAAKLQGS 818
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1007 H-DADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERN 1085
Cdd:TIGR00606 819 DlDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELSTEVQ 898
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1086 TLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELN-------SENKKILKQK------------EAAEAKSRQESTE 1146
Cdd:TIGR00606 899 SLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNkkaqdkvNDIKEKVKNIhgymkdienkiqDGKDDYLKQKETE 978
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1147 KVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDV--ACQKHIKEREELE------HYQK 1218
Cdd:TIGR00606 979 LNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVeeELKQHLKEMGQMQvlqmkqEHQK 1058
|
890 900 910 920
....*....|....*....|....*....|....*....|...
gi 2024359618 1219 lLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAE 1261
Cdd:TIGR00606 1059 -LEENIDLIKRNHVLALGRQKGYEKEIKHFKKELREPQFRDAE 1100
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
602-1354 |
4.54e-08 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 58.58 E-value: 4.54e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 602 ENESLKTKLDHANKENSDVIELWKSKLESAIASHQQAMEELKvsfnKGVGAQTAEFAELKTQMEKVKLDYENEMS-NLKL 680
Cdd:pfam05483 71 ENSEGLSRLYSKLYKEAEKIKKWKVSIEAELKQKENKLQENR----KIIEAQRKAIQELQFENEKVSLKLEEEIQeNKDL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 681 KQENEKSQH----LKEIEALKAKLLEVTE-EKEQT----------LENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKE 745
Cdd:pfam05483 147 IKENNATRHlcnlLKETCARSAEKTKKYEyEREETrqvymdlnnnIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQH 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 746 LDV-LQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKansEGKLEIQKLSEQLQAAEKQIQNLeTEKVSNLTKELQgke 824
Cdd:pfam05483 227 LEEeYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLE---ESRDKANQLEEKTKLQDENLKEL-IEKKDHLTKELE--- 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 825 qkllDLEKNLSAVNQVKDSLEKELQLlkekftsavdgaenaqrAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSS 904
Cdd:pfam05483 300 ----DIKMSLQRSMSTQKALEEDLQI-----------------ATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATT 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 905 GDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKnveqtAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMET 984
Cdd:pfam05483 359 CSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTK-----FKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEE 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 985 SQNQykdlqakyEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEie 1064
Cdd:pfam05483 434 LKGK--------EQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKE-- 503
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1065 lMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQD----REELWTKNEELNSENKKILKQKEAAEAKS 1140
Cdd:pfam05483 504 -LTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDElesvREEFIQKGDEVKCKLDKSEENARSIEYEV 582
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1141 RQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLK--ELQANKDAVDVACQKHiKEREELEHYQK 1218
Cdd:pfam05483 583 LKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNayEIKVNKLELELASAKQ-KFEEIIDNYQK 661
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1219 LLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDldlKSTHIALKNEIDCLLQTNRSLQSEKE 1298
Cdd:pfam05483 662 EIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVALMEKH---KHQYDKIIEERDSELGLYKNKEQEQS 738
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359618 1299 MLlksREELCVSLANTANENQALKlrkdemqTELETEREKLEKMTKDNMDLKASLS 1354
Cdd:pfam05483 739 SA---KAALEIELSNIKAELLSLK-------KQLEIEKEEKEKLKMEAKENTAILK 784
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
2161-2177 |
7.75e-08 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 49.77 E-value: 7.75e-08
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1360-2033 |
8.30e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 57.84 E-value: 8.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1360 LEEMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAfTEKINELNLEKESVFSKS 1439
Cdd:PTZ00121 1214 AEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKA-EEARKADELKKAEEKKKA 1292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1440 LQFEKHNEAL----LREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELKKKNLE 1515
Cdd:PTZ00121 1293 DEAKKAEEKKkadeAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKK 1372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1516 NQEliaCRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTV 1595
Cdd:PTZ00121 1373 KEE---AKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEA 1449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1596 EKKARILDKESFLLERMELQNNIGFLEKEVEEMRE-----KNKEFLTEKELLVQEKEKSETKLEEVIKEKMilYKETEQL 1670
Cdd:PTZ00121 1450 KKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKadeakKKAEEAKKKADEAKKAAEAKKKADEAKKAEE--AKKADEA 1527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1671 ASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEK----MELVQENESLHAEWKSLVIINEEILKEKEK 1746
Cdd:PTZ00121 1528 KKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEedknMALRKAEEAKKAEEARIEEVMKLYEEEKKM 1607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1747 LSKEYYKLHEKVVALLEQTDADFSCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVT 1826
Cdd:PTZ00121 1608 KAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE 1687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1827 KEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQL 1906
Cdd:PTZ00121 1688 KKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEE 1767
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1907 AALQEENVKLAEELGRSRDEVTSHQKLEEERSVlnNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTSALITQK 1986
Cdd:PTZ00121 1768 KKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKI--KDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEE 1845
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 2024359618 1987 DEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQ 2033
Cdd:PTZ00121 1846 ADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEK 1892
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
406-1518 |
1.02e-07 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 57.75 E-value: 1.02e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 406 EMEAKMDQLRAMVEAADREKVELLNQLEEEKRKVEDLQ----------FRVEEESITKGDL-----ERKRQISEDPENTQ 470
Cdd:TIGR01612 541 EIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEkeikdlfdkyLEIDDEIIYINKLklelkEKIKNISDKNEYIK 620
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 471 TKLEHARIKELEQSLLFEKTKADKLQ----RELEDTRVATV-SEKSRIME-----LERDLALRVKEVAelRGRLESSKHI 540
Cdd:TIGR01612 621 KAIDLKKIIENNNAYIDELAKISPYQvpehLKNKDKIYSTIkSELSKIYEddidaLYNELSSIVKENA--IDNTEDKAKL 698
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 541 DDVDTSLSllQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEI-----KTLSASNERMGKENESLKTKLDHANK 615
Cdd:TIGR01612 699 DDLKSKID--KEYDKIQNMETATVELHLSNIENKKNELLDIIVEIKKHIhgeinKDLNKILEDFKNKEKELSNKINDYAK 776
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 616 ENsDVIELWKSKLesaiashqqamEELKVSFNKGVGAQTAEFAELKTQMEKVKlDYENEMSnlklKQENEKSQHLKEIEA 695
Cdd:TIGR01612 777 EK-DELNKYKSKI-----------SEIKNHYNDQINIDNIKDEDAKQNYDKSK-EYIKTIS----IKEDEIFKIINEMKF 839
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 696 LKAKLLEVTEEKEQTLENLKAKLESVEDQhlveMEDTLNKLQeAEIKVKELDVLQAKCNEQTKLIGSLTQQIrasEEKLL 775
Cdd:TIGR01612 840 MKDDFLNKVDKFINFENNCKEKIDSEHEQ----FAELTNKIK-AEISDDKLNDYEKKFNDSKSLINEINKSI---EEEYQ 911
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 776 DLAALQKANSEGKL------EIQKL-SEQLQAAEKQIQNLETEKVSNLTKELQGKE------QKLLDLEK-----NLSAV 837
Cdd:TIGR01612 912 NINTLKKVDEYIKIcentkeSIEKFhNKQNILKEILNKNIDTIKESNLIEKSYKDKfdntliDKINELDKafkdaSLNDY 991
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 838 NQVKDSLEKELQLLKEKFtsavdGAENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKM--- 914
Cdd:TIGR01612 992 EAKNNELIKYFNDLKANL-----GKNKENMLYHQFDEKEKATNDIEQKIEDANKNIPNIEIAIHTSIYNIIDEIEKEigk 1066
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 915 NDELrLKERQLEQIQLELTKANEKAVQLqknveQTAQKAEQSQQETLKtHQEELKKMQDQLTDMKKQMETSQNQYKDLQA 994
Cdd:TIGR01612 1067 NIEL-LNKEILEEAEINITNFNEIKEKL-----KHYNFDDFGKEENIK-YADEINKIKDDIKNLDQKIDHHIKALEEIKK 1139
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 995 KYEKETSEMITKHDaDIKGFKQNLLdAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLAsarkEIELMSDKMRDLI 1074
Cdd:TIGR01612 1140 KSENYIDEIKAQIN-DLEDVADKAI-SNDDPEEIEKKIENIVTKIDKKKNIYDEIKKLLNEIA----EIEKDKTSLEEVK 1213
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1075 SEKETLAQERNTLKLEK---ESLLSQHL--EMESKIllvqQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVA 1149
Cdd:TIGR01612 1214 GINLSYGKNLGKLFLEKideEKKKSEHMikAMEAYI----EDLDEIKEKSPEIENEMGIEMDIKAEMETFNISHDDDKDH 1289
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1150 LISEKS--KLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQK-----------HIKE-REELEH 1215
Cdd:TIGR01612 1290 HIISKKhdENISDIREKSLKIIEDFSEESDINDIKKELQKNLLDAQKHNSDINLYLNEianiynilklnKIKKiIDEVKE 1369
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1216 YQKLLEENDRVIKDKDDVIQRL-QSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQ 1294
Cdd:TIGR01612 1370 YTKEIEENNKNIKDELDKSEKLiKKIKDDINLEECKSKIESTLDDKDIDECIKKIKELKNHILSEESNIDTYFKNADENN 1449
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1295 SEKEMLLKSREelcvsLANTANEnQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEK 1374
Cdd:TIGR01612 1450 ENVLLLFKNIE-----MADNKSQ-HILKIKKDNATNDHDFNINELKEHIDKSKGCKDEADKNAKAIEKNKELFEQYKKDV 1523
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1375 IHLLQEalfASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREK- 1453
Cdd:TIGR01612 1524 TELLNK---YSALAIKNKFAKTKKDSEIIIKEIKDAHKKFILEAEKSEQKIKEIKKEKFRIEDDAAKNDKSNKAAIDIQl 1600
|
1130 1140 1150 1160 1170 1180 1190
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024359618 1454 --DELERKYSELLDEKKSLENAFSDM----KREQELDFSAKRLLVQENTTLKYSIEALEEELK--KKNLENQE 1518
Cdd:TIGR01612 1601 slENFENKFLKISDIKKKINDCLKETesieKKISSFSIDSQDTELKENGDNLNSLQEFLESLKdqKKNIEDKK 1673
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
622-1048 |
1.05e-07 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 57.65 E-value: 1.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 622 ELWKSKleSAIASHQQAMEELkvsfnkgvgaqTAEFAELKTQMEKVKLDYENEMSNLKLKQE----NEKSQHLKE-IEAL 696
Cdd:COG3096 293 ELFGAR--RQLAEEQYRLVEM-----------ARELEELSARESDLEQDYQAASDHLNLVQTalrqQEKIERYQEdLEEL 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 697 KAKLlevtEEKEQTLENLKAKLESVEDQhlvemedtlnkLQEAEIKVKEL-----DVLQAKCNEQTKLIgSLTQQIRASE 771
Cdd:COG3096 360 TERL----EEQEEVVEEAAEQLAEAEAR-----------LEAAEEEVDSLksqlaDYQQALDVQQTRAI-QYQQAVQALE 423
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 772 E--KLLDLAALQKANSEGKLEiqklseQLQAAEKQIqnletekvsnltkelqgkEQKLLDLEKNLSAVNQVKDSLEKELQ 849
Cdd:COG3096 424 KarALCGLPDLTPENAEDYLA------AFRAKEQQA------------------TEEVLELEQKLSVADAARRQFEKAYE 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 850 LLkEKFTSAVDGAENAQRAMQVMET----------------KLKEREEREQQLTEAKVKLEndiaEIMKSSGDSSAQLMK 913
Cdd:COG3096 480 LV-CKIAGEVERSQAWQTARELLRRyrsqqalaqrlqqlraQLAELEQRLRQQQNAERLLE----EFCQRIGQQLDAAEE 554
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 914 MNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQsqqetLKTHQEELKKMQDQLTDMKKQmetSQNQYKDLQ 993
Cdd:COG3096 555 LEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKE-----LAARAPAWLAAQDALERLREQ---SGEALADSQ 626
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 2024359618 994 akyeketsemitkhdaDIKGFKQNLLDAEEALKAAQkknDELETQAEELKKQAEQ 1048
Cdd:COG3096 627 ----------------EVTAAMQQLLEREREATVER---DELAARKQALESQIER 662
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
336-1006 |
1.30e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 57.04 E-value: 1.30e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 336 LLTETSSRYARKISGTTALQEALKEKQQHIEQLLaERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDqlr 415
Cdd:pfam05483 159 LLKETCARSAEKTKKYEYEREETRQVYMDLNNNI-EKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKE--- 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 416 amVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKrqisedpentqTKLEHARIKELEQsllfektKADKL 495
Cdd:pfam05483 235 --INDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEK-----------TKLQDENLKELIE-------KKDHL 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 496 QRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGrlESSKHIDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLK 575
Cdd:pfam05483 295 TKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTE--EKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRL 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 576 EKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKE-NSDVIELWKSKLESAIASHQQAMEELKVSFnkgVGAQT 654
Cdd:pfam05483 373 EKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKIlAEDEKLLDEKKQFEKIAEELKGKEQELIFL---LQARE 449
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 655 AEFAELKTQMEKVKLD---YENEMSNLKLKQENEKsqhLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQhlvemED 731
Cdd:pfam05483 450 KEIHDLEIQLTAIKTSeehYLKEVEDLKTELEKEK---LKNIELTAHCDKLLLENKELTQEASDMTLELKKHQ-----ED 521
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 732 TLNKLQEAEIKVKELDVLQAK-CNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNL-- 808
Cdd:pfam05483 522 IINCKKQEERMLKQIENLEEKeMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLkk 601
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 809 ----ETEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVMETKLKEREEREQ 884
Cdd:pfam05483 602 qienKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAK 681
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 885 QLTEAKVKLENDIaeimkssgdssaqlmkmndELRLKERQLEQIQL-ELTKANEKAVQLQKNVEQTAQKAEQSQQETLKT 963
Cdd:pfam05483 682 AIADEAVKLQKEI-------------------DKRCQHKIAEMVALmEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKA 742
|
650 660 670 680
....*....|....*....|....*....|....*....|....
gi 2024359618 964 HQE-ELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITK 1006
Cdd:pfam05483 743 ALEiELSNIKAELLSLKKQLEIEKEEKEKLKMEAKENTAILKDK 786
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1108-1935 |
1.34e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 57.00 E-value: 1.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1108 VQQDREELWTKNEELNSENKKILKQKEAAEA----KSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSES 1183
Cdd:TIGR02169 182 VEENIERLDLIIDEKRQQLERLRREREKAERyqalLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEIS 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1184 TLLQQLKELQankdavdvacqkhIKEREELEHYQKLLEENDRVIKDKddvIQRLQSSYDDLARNQRELLQEVSILTAERD 1263
Cdd:TIGR02169 262 ELEKRLEEIE-------------QLLEELNKKIKDLGEEEQLRVKEK---IGELEAEIASLERSIAEKERELEDAEERLA 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1264 SAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKlrkdemqTELETEREKLEKMT 1343
Cdd:TIGR02169 326 KLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETR-------DELKDYREKLEKLK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1344 KDNMDLKASLSSLSNFLEEmKSSREASNSEKIHLLQEALFASEQRLLAEREELvnenKAVTEKLTKATADAVLAET---A 1420
Cdd:TIGR02169 399 REINELKRELDRLQEELQR-LSEELADLNAAIAGIEAKINELEEEKEDKALEI----KKQEWKLEQLAADLSKYEQelyD 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1421 FTEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSA---------KRLL 1491
Cdd:TIGR02169 474 LKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAievaagnrlNNVV 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1492 VQENTTLKYSIEALEEELKKKN--LENQELIACRSDLSDLLKEA--QDARRTLENELAAVSHAKQVLSSS--FNTCSSDI 1565
Cdd:TIGR02169 554 VEDDAVAKEAIELLKRRKAGRAtfLPLNKMRDERRDLSILSEDGviGFAVDLVEFDPKYEPAFKYVFGDTlvVEDIEAAR 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1566 EILNRERT-----ELQDKCQKLTGEvenmkenlTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKE 1640
Cdd:TIGR02169 634 RLMGKYRMvtlegELFEKSGAMTGG--------SRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLD 705
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1641 LLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDvhscvsvMLDELQHKYEVTEKEKMELV 1720
Cdd:TIGR02169 706 ELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKS-------ELKELEARIEELEEDLHKLE 778
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1721 QENESLHAEwkslviINEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSCRLLvsegKHELLLEEMSNLALKLREIErl 1800
Cdd:TIGR02169 779 EALNDLEAR------LSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTL----EKEYLEKEIQELQEQRIDLK-- 846
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1801 qaqtfmqkfeaDKRAEevlqtmekVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNL 1880
Cdd:TIGR02169 847 -----------EQIKS--------IEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEE 907
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*
gi 2024359618 1881 ENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEE 1935
Cdd:TIGR02169 908 LEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQR 962
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
916-1114 |
1.46e-07 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 55.99 E-value: 1.46e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 916 DELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDlQAK 995
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAE-LEALQAEIDKLQAEIAEAEAEIEERREELGE-RAR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 996 YEKETSEMITKHDA-----DIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKM 1070
Cdd:COG3883 94 ALYRSGGSVSYLDVllgseSFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAEL 173
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2024359618 1071 RDLISEKE----TLAQERNTLKLEKESLLSQHLEMESKILLVQQDREE 1114
Cdd:COG3883 174 EAQQAEQEallaQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAA 221
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
709-1267 |
1.74e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 56.85 E-value: 1.74e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 709 QTLENLKAKLESVEDQ--HLVEMEDTLNKLQEAEIKVKELDVLQAKCN--EQTKLIGSLTQQIRASEEkllDLAALQKAN 784
Cdd:COG4913 235 DDLERAHEALEDAREQieLLEPIRELAERYAAARERLAELEYLRAALRlwFAQRRLELLEAELEELRA---ELARLEAEL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 785 SEGKLEIQKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSL-------EKELQLLKEKFTS 857
Cdd:COG4913 312 ERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALglplpasAEEFAALRAEAAA 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 858 AVDGAENAQRAMQvmeTKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKM----NDELRLKERQL----EQIQ 929
Cdd:COG4913 392 LLEALEEELEALE---EALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALrdalAEALGLDEAELpfvgELIE 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 930 LEL-----TKANEKA------------------------------VQLQKnVEQTAQKAEQSQQE--------TLKTH-- 964
Cdd:COG4913 469 VRPeeerwRGAIERVlggfaltllvppehyaaalrwvnrlhlrgrLVYER-VRTGLPDPERPRLDpdslagklDFKPHpf 547
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 965 ----QEELKKM--------QDQLTDMKKQMeTSQNQYKDLQAKYEKETSEMITKH-------DADIKGFKQNLLDAEEAL 1025
Cdd:COG4913 548 rawlEAELGRRfdyvcvdsPEELRRHPRAI-TRAGQVKGNGTRHEKDDRRRIRSRyvlgfdnRAKLAALEAELAELEEEL 626
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1026 KAAQKKNDELETQAEELKKQAEQAKSLSSV------LASARKEIELMSDKMRDLISEKETLAQerntLKLEKESLLSQHL 1099
Cdd:COG4913 627 AEAEERLEALEAELDALQERREALQRLAEYswdeidVASAEREIAELEAELERLDASSDDLAA----LEEQLEELEAELE 702
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1100 EMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTekvALISEKSKLLSEIETAQADLLKITQENDALR 1179
Cdd:COG4913 703 ELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELR---ALLEERFAAALGDAVERELRENLEERIDALR 779
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1180 SSESTLLQQL-KELQANKDAVDVACQKHIKEREELEHYQKLLE--ENDRVIKDKDDVIQRLQSSyddlarNQRELLQEVS 1256
Cdd:COG4913 780 ARLNRAEEELeRAMRAFNREWPAETADLDADLESLPEYLALLDrlEEDGLPEYEERFKELLNEN------SIEFVADLLS 853
|
650
....*....|.
gi 2024359618 1257 ILTAERDSAQE 1267
Cdd:COG4913 854 KLRRAIREIKE 864
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
542-1230 |
1.92e-07 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 56.65 E-value: 1.92e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 542 DVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKfESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVI 621
Cdd:pfam05483 69 DFENSEGLSRLYSKLYKEAEKIKKWKVSIEAELKQK-ENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 622 E------LWKSKLESAIAS----------HQQAMEELKVSFNKGVGAQTAEFAELKTQMEKVKLDYenemsNLKLKQENE 685
Cdd:pfam05483 148 KennatrHLCNLLKETCARsaektkkyeyEREETRQVYMDLNNNIEKMILAFEELRVQAENARLEM-----HFKLKEDHE 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 686 KSQHLKE--------IEALKAKLLEVTEEKEQTLENLKAKLESVEDQ-HLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQ 756
Cdd:pfam05483 223 KIQHLEEeykkeindKEKQVSLLLIQITEKENKMKDLTFLLEESRDKaNQLEEKTKLQDENLKELIEKKDHLTKELEDIK 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 757 TKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETeKVSNLTKELQGKEQKLLDLEKNLSA 836
Cdd:pfam05483 303 MSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEA-TTCSLEELLRTEQQRLEKNEDQLKI 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 837 VNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIM---KSSGDSSAQLMK 913
Cdd:pfam05483 382 ITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQareKEIHDLEIQLTA 461
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 914 MNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQET------LKTHQEELKKMQDQLTDMKKQMETSQN 987
Cdd:pfam05483 462 IKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEAsdmtleLKKHQEDIINCKKQEERMLKQIENLEE 541
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 988 QYKDLQAKYEKETSEMITKHD---ADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIE 1064
Cdd:pfam05483 542 KEMNLRDELESVREEFIQKGDevkCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALK 621
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1065 LMSDKMRDLISEKETlaqERNTLKLEKESLLSQHLEM----ESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKS 1140
Cdd:pfam05483 622 KKGSAENKQLNAYEI---KVNKLELELASAKQKFEEIidnyQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRC 698
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1141 RQESTEKVALISEKS----KLLSEIETAQADLLKITQENDALRSSESTLLQQLK-ELQANKDAVDVacqkhikEREELEH 1215
Cdd:pfam05483 699 QHKIAEMVALMEKHKhqydKIIEERDSELGLYKNKEQEQSSAKAALEIELSNIKaELLSLKKQLEI-------EKEEKEK 771
|
730
....*....|....*
gi 2024359618 1216 YQKLLEENDRVIKDK 1230
Cdd:pfam05483 772 LKMEAKENTAILKDK 786
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1109-1927 |
2.33e-07 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 56.52 E-value: 2.33e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1109 QQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSS------- 1181
Cdd:pfam02463 183 ENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESskqeiek 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1182 ESTLLQQLKELQANKDAVDVACQKHIKEREELEhyQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSIltAE 1261
Cdd:pfam02463 263 EEEKLAQVLKENKEEEKEKKLQEEELKLLAKEE--EELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEE--IE 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1262 RDSAQEKDLDLKSthIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEK 1341
Cdd:pfam02463 339 ELEKELKELEIKR--EAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQ 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1342 MTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAF 1421
Cdd:pfam02463 417 LEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKLE 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1422 TEKINELNLEKESVFSKSLQFE----KHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTT 1497
Cdd:pfam02463 497 ERSQKESKARSGLKVLLALIKDgvggRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPLG 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1498 LKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQ- 1576
Cdd:pfam02463 577 ARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEe 656
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1577 ---DKCQKLTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKL 1653
Cdd:pfam02463 657 glaEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINE 736
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1654 EEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQhkYEVTEKEKMELVQENESLHAEWKSL 1733
Cdd:pfam02463 737 ELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVE--EEKEEKLKAQEEELRALEEELKEEA 814
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1734 VIINEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADK 1813
Cdd:pfam02463 815 ELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEK 894
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1814 RAEEvLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFE 1893
Cdd:pfam02463 895 EKEE-KKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELG 973
|
810 820 830
....*....|....*....|....*....|....
gi 2024359618 1894 ALKLAAAQKSQQLAALQEENVKLAEELGRSRDEV 1927
Cdd:pfam02463 974 KVNLMAIEEFEEKEERYNKDELEKERLEEEKKKL 1007
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
781-1483 |
2.78e-07 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 56.13 E-value: 2.78e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 781 QKANSEGKLEIQKLSEQL--QAAEKQIQNLeTEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEkftsa 858
Cdd:TIGR00618 188 KKKSLHGKAELLTLRSQLltLCTPCMPDTY-HERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQL----- 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 859 vdgAENAQRAMQVMETKLKEREEREQQLTEAKVKLEndIAEIMKSSGDSSAQLMKMNDELRLKERQLEQI--QLELTKAN 936
Cdd:TIGR00618 262 ---LKQLRARIEELRAQEAVLEETQERINRARKAAP--LAAHIKAVTQIEQQAQRIHTELQSKMRSRAKLlmKRAAHVKQ 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 937 EKAVQLQKNVEQTAQKAEQ------SQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITK--HD 1008
Cdd:TIGR00618 337 QSSIEEQRRLLQTLHSQEIhirdahEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQREQATIdtRT 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1009 ADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIElmsdkmrDLISEKETLAQERNTLK 1088
Cdd:TIGR00618 417 SAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKERE-------QQLQTKEQIHLQETRKK 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1089 LEKESLLSQHLEMESkiLLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKV-----ALISEKSKLLSEIET 1163
Cdd:TIGR00618 490 AVVLARLLELQEEPC--PLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVyhqltSERKQRASLKEQMQE 567
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1164 AQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDD 1243
Cdd:TIGR00618 568 IQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTA 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1244 LARNQRELLQEvSILTAERDSAQEKDLDLKSTHIALKneidcllqtnrSLQSEKEMLLKSREELcvslantaneNQALKL 1323
Cdd:TIGR00618 648 LHALQLTLTQE-RVREHALSIRVLPKELLASRQLALQ-----------KMQSEKEQLTYWKEML----------AQCQTL 705
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1324 RKDEMQTELETEREkLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLL------AEREELV 1397
Cdd:TIGR00618 706 LRELETHIEEYDRE-FNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTaalqtgAELSHLA 784
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1398 NENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKD----ELERKYSELLDEKKSLENA 1473
Cdd:TIGR00618 785 AEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSatlgEITHQLLKYEECSKQLAQL 864
|
730
....*....|
gi 2024359618 1474 FSDMKREQEL 1483
Cdd:TIGR00618 865 TQEQAKIIQL 874
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1011-1635 |
2.98e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 55.84 E-value: 2.98e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1011 IKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIElmsdKMRDLISEKETLAQERNTLKLE 1090
Cdd:PRK03918 171 IKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELE----KLEKEVKELEELKEEIEELEKE 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1091 KESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEA--KSRQESTEKVALISEKSKLLSEIETAQADL 1168
Cdd:PRK03918 247 LESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEyiKLSEFYEEYLDELREIEKRLSRLEEEINGI 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1169 LKITQENDALRSSESTLLQQLKELQANKDAvdvacqkhIKEREELEHYQKLLEENDRVIKDK--DDVIQRLQSSYDDLAR 1246
Cdd:PRK03918 327 EERIKELEEKEERLEELKKKLKELEKRLEE--------LEERHELYEEAKAKKEELERLKKRltGLTPEKLEKELEELEK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1247 NQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKsrEELCVSLANTANENQALklrkD 1326
Cdd:PRK03918 399 AKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELL--EEYTAELKRIEKELKEI----E 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1327 EMQTELETEREKLEKMTKDNMDLkASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVtek 1406
Cdd:PRK03918 473 EKERKLRKELRELEKVLKKESEL-IKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKEL--- 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1407 ltkatadavlaetaftEKINELNLEKesvfskslqfekhnEALLREKDELERKYSELLDEKKSLenAFSDMKrEQELDFS 1486
Cdd:PRK03918 549 ----------------EKLEELKKKL--------------AELEKKLDELEEELAELLKELEEL--GFESVE-ELEERLK 595
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1487 AKRLLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAK-QVLSSSFNTCSSDI 1565
Cdd:PRK03918 596 ELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEyEELREEYLELSREL 675
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1566 EILNRERTELQDKCQKLTGEVENMKENLTVEKKARildKESFLLERMelqnnigflEKEVEEMREKNKEF 1635
Cdd:PRK03918 676 AGLRAELEELEKRREEIKKTLEKLKEELEEREKAK---KELEKLEKA---------LERVEELREKVKKY 733
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
790-1260 |
3.67e-07 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 55.54 E-value: 3.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 790 EIQKLSEQLQAAEKQIQNLETekvsnLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEkftsavdgaenaqram 869
Cdd:COG4717 72 ELKELEEELKEAEEKEEEYAE-----LQEELEELEEELEELEAELEELREELEKLEKLLQLLPL---------------- 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 870 qvmetkLKEREEREQQLTEAKVKLEndiaeimkssgdssaqlmkmndELRLKERQLEQIQLELTKANEKAVQLQKNVEQT 949
Cdd:COG4717 131 ------YQELEALEAELAELPERLE----------------------ELEERLEELRELEEELEELEAELAELQEELEEL 182
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 950 AQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQ 1029
Cdd:COG4717 183 LEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALL 262
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1030 KKNDELETQAEELKKQAEQAKSLSSVL--------ASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEM 1101
Cdd:COG4717 263 GLGGSLLSLILTIAGVLFLVLGLLALLflllarekASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLEL 342
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1102 ESKILLVQQDREELWTKNEELNSENKKILKQK--EAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALR 1179
Cdd:COG4717 343 LDRIEELQELLREAEELEEELQLEELEQEIAAllAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELL 422
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1180 S--SESTLLQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRvikdkddvIQRLQSSYDDLARNQRELLQEVSI 1257
Cdd:COG4717 423 EalDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGE--------LAELLQELEELKAELRELAEEWAA 494
|
...
gi 2024359618 1258 LTA 1260
Cdd:COG4717 495 LKL 497
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1800-2114 |
3.69e-07 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 55.85 E-value: 3.69e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1800 LQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIhqeKIETLASLENSRQ-------TNEKLQNELDMLKQNNLKNEEELT 1872
Cdd:COG5022 765 LQALKRIKKIQVIQHGFRLRRLVDYELKWRLFI---KLQPLLSLLGSRKeyrsylaCIIKLQKTIKREKKLRETEEVEFS 841
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1873 KSKELLNLENKKVEELKKEFEALKlaaaqKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLP 1952
Cdd:COG5022 842 LKAEVLIQKFGRSLKAKKRFSLLK-----KETIYLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLS 916
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1953 SNTLRESTLKKEID--EERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKN 2030
Cdd:COG5022 917 SDLIENLEFKTELIarLKKLLNNIDLEEGPSIEYVKLPELNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKN 996
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 2031 LEQKLKAKSEQPLTVTSPSGDiaANLLQDESAEdKQQEIDFLNSVIVDLQRRNEELNLKiqRMCEAALNGNEEETINYDS 2110
Cdd:COG5022 997 FKKELAELSKQYGALQESTKQ--LKELPVEVAE-LQSASKIISSESTELSILKPLQKLK--GLLLLENNQLQARYKALKL 1071
|
....
gi 2024359618 2111 EEEG 2114
Cdd:COG5022 1072 RREN 1075
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
950-1194 |
4.50e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 54.38 E-value: 4.50e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 950 AQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKyeketsemITKHDADIKGFKQNLLDAEEALKAAQ 1029
Cdd:COG4942 19 ADAAAEAEAE-LEQLQQEIAELEKELAALKKEEKALLKQLAALERR--------IAALARRIRALEQELAALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1030 KKNDELETQAEELKKQ-AEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLlsqhlemeskillv 1108
Cdd:COG4942 90 KEIAELRAELEAQKEElAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEEL-------------- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1109 QQDREELWTKNEELNSEnkkiLKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQAdllKITQENDALRSSESTLLQQ 1188
Cdd:COG4942 156 RADLAELAALRAELEAE----RAELEALLAELEEERAALEALKAERQKLLARLEKELA---ELAAELAELQQEAEELEAL 228
|
....*.
gi 2024359618 1189 LKELQA 1194
Cdd:COG4942 229 IARLEA 234
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
615-1964 |
4.80e-07 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 55.44 E-value: 4.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 615 KENSDVIELWKSKLESAIASHQQAMEELKVSFN----KGVGAQTAEFAELKTQMEKVKLDYenemsNLKLKQENEKSQHL 690
Cdd:TIGR01612 503 KDFKDIIDFMELYKPDEVPSKNIIGFDIDQNIKaklyKEIEAGLKESYELAKNWKKLIHEI-----KKELEEENEDSIHL 577
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 691 -KEIEALKAKLLEVTEE----KEQTLEnLKAKLESVED--QHLVEMEDTLNKLQEAEIKVKELDVLQA-KCNEQTKLIGS 762
Cdd:TIGR01612 578 eKEIKDLFDKYLEIDDEiiyiNKLKLE-LKEKIKNISDknEYIKKAIDLKKIIENNNAYIDELAKISPyQVPEHLKNKDK 656
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 763 LTQQIRASEEKLL--DLAALQKA-----------NSEGKLEIQKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQKLLD 829
Cdd:TIGR01612 657 IYSTIKSELSKIYedDIDALYNElssivkenaidNTEDKAKLDDLKSKIDKEYDKIQNMETATVELHLSNIENKKNELLD 736
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 830 --LEKNLSAVNQVKDSLEKELQLLKEK---FTSAVDGAENAQRAMQVMETKLKE-REEREQQLTEAKVKlENDIAEIMKS 903
Cdd:TIGR01612 737 iiVEIKKHIHGEINKDLNKILEDFKNKekeLSNKINDYAKEKDELNKYKSKISEiKNHYNDQINIDNIK-DEDAKQNYDK 815
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 904 SGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKkmQDQLTDMKKQME 983
Cdd:TIGR01612 816 SKEYIKTISIKEDEIFKIINEMKFMKDDFLNKVDKFINFENNCKEKIDSEHEQFAELTNKIKAEIS--DDKLNDYEKKFN 893
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 984 TSQNQYKDLQAKYEKETSEMITKHDADikGFKQNLLDAEEALKAAQKKNDELEtqaEELKKQAEQAKSLSSVLASARKEI 1063
Cdd:TIGR01612 894 DSKSLINEINKSIEEEYQNINTLKKVD--EYIKICENTKESIEKFHNKQNILK---EILNKNIDTIKESNLIEKSYKDKF 968
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1064 ElmsdkmrdlisekETLAQERNTL-KLEKESLLSQHLEMESKILLVQQDREELWTKNEElnsenkKILKQKEAAEAKSRQ 1142
Cdd:TIGR01612 969 D-------------NTLIDKINELdKAFKDASLNDYEAKNNELIKYFNDLKANLGKNKE------NMLYHQFDEKEKATN 1029
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1143 ESTEKvalISEKSKLLSEIETA-QADLLKITQENDAL--RSSESTLLQQLKELQANkdavdVACQKHIKEREELEHYQKL 1219
Cdd:TIGR01612 1030 DIEQK---IEDANKNIPNIEIAiHTSIYNIIDEIEKEigKNIELLNKEILEEAEIN-----ITNFNEIKEKLKHYNFDDF 1101
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1220 LEENDrvIKDKDDViqrlQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEM 1299
Cdd:TIGR01612 1102 GKEEN--IKYADEI----NKIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLEDVADKAISNDDPEEIEKKI 1175
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1300 llksrEELCVSLANTANENQALKLRKDEMqTELETEREKLEKMTKDNMDLKASLSSLsnFLEEMKSSREASnsekihllq 1379
Cdd:TIGR01612 1176 -----ENIVTKIDKKKNIYDEIKKLLNEI-AEIEKDKTSLEEVKGINLSYGKNLGKL--FLEKIDEEKKKS--------- 1238
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1380 EALFASEQRLLAEREELvnenkavtEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEAL--LREKD--- 1454
Cdd:TIGR01612 1239 EHMIKAMEAYIEDLDEI--------KEKSPEIENEMGIEMDIKAEMETFNISHDDDKDHHIISKKHDENIsdIREKSlki 1310
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1455 -ELERKYSELLDEKKSLENAFSDMKREQeldfSAKRLLVQENTTLkYSIEALEeelKKKNLENQeliacrsdLSDLLKEA 1533
Cdd:TIGR01612 1311 iEDFSEESDINDIKKELQKNLLDAQKHN----SDINLYLNEIANI-YNILKLN---KIKKIIDE--------VKEYTKEI 1374
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1534 QDARRTLENELAAVSHAKQVL--SSSFNTCSSDIEilnrerTELQDKcqKLTGEVENMKENltvekKARILDKES----F 1607
Cdd:TIGR01612 1375 EENNKNIKDELDKSEKLIKKIkdDINLEECKSKIE------STLDDK--DIDECIKKIKEL-----KNHILSEESnidtY 1441
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1608 LLERMELQNNIGFLEKEVEEMREKNKEFLTEKE------------LLVQEKEKSETKLEEVIKEKmilyKETEQLASKIE 1675
Cdd:TIGR01612 1442 FKNADENNENVLLLFKNIEMADNKSQHILKIKKdnatndhdfninELKEHIDKSKGCKDEADKNA----KAIEKNKELFE 1517
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1676 QLKSDFTSLSVSKAELedvhscvsvmldELQHKYEVTEKEKMELVQENESLHaewKSLVIINEEILKEKEKLSKEYYKLH 1755
Cdd:TIGR01612 1518 QYKKDVTELLNKYSAL------------AIKNKFAKTKKDSEIIIKEIKDAH---KKFILEAEKSEQKIKEIKKEKFRIE 1582
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1756 EKVVALLEQTDADFSCRLLVSEGKHELLleEMSNLALK----LREIERLQAQ-------TFMQKFEADKRAEEVLQT-ME 1823
Cdd:TIGR01612 1583 DDAAKNDKSNKAAIDIQLSLENFENKFL--KISDIKKKindcLKETESIEKKissfsidSQDTELKENGDNLNSLQEfLE 1660
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1824 KVTKEKDAIHQEKIEtlasLENSRQTNEKLQNELDMLKQN------------NLKNEEELTKSKELLnleNKKVEELKKE 1891
Cdd:TIGR01612 1661 SLKDQKKNIEDKKKE----LDELDSEIEKIEIDVDQHKKNyeigiiekikeiAIANKEEIESIKELI---EPTIENLISS 1733
|
1370 1380 1390 1400 1410 1420 1430
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024359618 1892 FEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKE 1964
Cdd:TIGR01612 1734 FNTNDLEGIDPNEKLEEYNTEIGDIYEEFIELYNIIAGCLETVSKEPITYDEIKNTRINAQNEFLKIIEIEKK 1806
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
406-1409 |
6.73e-07 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 54.80 E-value: 6.73e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 406 EMEAKMDQLRAMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEdpentqtklehARIKELEQSL 485
Cdd:pfam01576 72 ELEEILHELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTE-----------AKIKKLEEDI 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 486 LFEKTKADKLQRE--LEDTRVATVSekSRIMELERdlalRVKEVAELRGRLESSkhiddvdtslsllqeISSLQEKMAAA 563
Cdd:pfam01576 141 LLLEDQNSKLSKErkLLEERISEFT--SNLAEEEE----KAKSLSKLKNKHEAM---------------ISDLEERLKKE 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 564 GKEHQrEMSSLKEKFESSEEALRKEIKTLSASNE----RMGKENESLKTKLDHANKENSDVIELWKS--KLESAIASHQQ 637
Cdd:pfam01576 200 EKGRQ-ELEKAKRKLEGESTDLQEQIAELQAQIAelraQLAKKEEELQAALARLEEETAQKNNALKKirELEAQISELQE 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 638 AMEELKVSFNKGvgaqTAEFAELKTQMEKVKLDYENEMSNLKLKQEnEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAK 717
Cdd:pfam01576 279 DLESERAARNKA----EKQRRDLGEELEALKTELEDTLDTTAAQQE-LRSKREQEVTELKKALEEETRSHEAQLQEMRQK 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 718 lesvEDQHLVEMEDTLNKLQEAEIKV-KELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAA----LQKANSEGKLEIQ 792
Cdd:pfam01576 354 ----HTQALEELTEQLEQAKRNKANLeKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGqlqeLQARLSESERQRA 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 793 KLSEQLQAAEKQIQNLET------EKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQ 866
Cdd:pfam01576 430 ELAEKLSKLQSELESVSSllneaeGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEE 509
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 867 RAMQVMEtklKEREEREQQLTEAKVKLENDIAEIMKSSGDSSaqlmKMNDELRLKERQLEQIQLELTKANEKAVQLQKNV 946
Cdd:pfam01576 510 EAKRNVE---RQLSTLQAQLSDMKKKLEEDAGTLEALEEGKK----RLQRELEALTQQLEEKAAAYDKLEKTKNRLQQEL 582
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 947 EQTAqkAEQSQQETLKTHQEELKKMQDQLTDMKKqmeTSQNQYKDLQAKYEKETSEMITKHDAdikgFKQNLLDAEEALK 1026
Cdd:pfam01576 583 DDLL--VDLDHQRQLVSNLEKKQKKFDQMLAEEK---AISARYAEERDRAEAEAREKETRALS----LARALEEALEAKE 653
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1027 AAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEkesllsqhLEMESKIL 1106
Cdd:pfam01576 654 ELERTNKQLRAEMEDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQLEELEDELQATEDAKLR--------LEVNMQAL 725
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1107 LVQQDReELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLlkitqenDALRSSESTLL 1186
Cdd:pfam01576 726 KAQFER-DLQARDEQGEEKRRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQI-------DAANKGREEAV 797
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1187 QQLKELQANKDAVDVACQKHIKEREELEHYQKlleENDRVIKDKDDVIQRLQssyDDLARNQRELLQevsiLTAERDSAQ 1266
Cdd:pfam01576 798 KQLKKLQAQMKDLQRELEEARASRDEILAQSK---ESEKKLKNLEAELLQLQ---EDLAASERARRQ----AQQERDELA 867
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1267 EKDLDLKSTHIALKNEidcllqtNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDN 1346
Cdd:pfam01576 868 DEIASGASGKSALQDE-------KRRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESAR 940
|
970 980 990 1000 1010 1020
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024359618 1347 MDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTK 1409
Cdd:pfam01576 941 QQLERQNKELKAKLQEMEGTVKSKFKSSIAALEAKIAQLEEQLEQESRERQAANKLVRRTEKK 1003
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
829-2033 |
7.68e-07 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 55.06 E-value: 7.68e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 829 DLEKNLSAVNQVKdsleKELQLLKEkFTSAVDGAENAQRamQVMETKLKEREEREQQLteaKVKLENDIAEIMKSSGDSS 908
Cdd:TIGR01612 484 DIDENSKQDNTVK----LILMRMKD-FKDIIDFMELYKP--DEVPSKNIIGFDIDQNI---KAKLYKEIEAGLKESYELA 553
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 909 AQLmkmndelrlkERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQE-----TLKTH-QEELKKMQDQ------LT 976
Cdd:TIGR01612 554 KNW----------KKLIHEIKKELEEENEDSIHLEKEIKDLFDKYLEIDDEiiyinKLKLElKEKIKNISDKneyikkAI 623
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 977 DMKKQMEtSQNQYKDLQAK--------YEKETSEMITKHDADIKGFKQNLLDA-EEALKAAQKKND----ELETQAEELK 1043
Cdd:TIGR01612 624 DLKKIIE-NNNAYIDELAKispyqvpeHLKNKDKIYSTIKSELSKIYEDDIDAlYNELSSIVKENAidntEDKAKLDDLK 702
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1044 KQAEQAKSLSSVLASARKE-----IELMSDKMRDLISE--KETLAQERNTLKLEKESLLSQHLEMESKIllvqqdrEELW 1116
Cdd:TIGR01612 703 SKIDKEYDKIQNMETATVElhlsnIENKKNELLDIIVEikKHIHGEINKDLNKILEDFKNKEKELSNKI-------NDYA 775
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1117 TKNEELNSENKKILKQKEAAEAKSRQEST--EKVALISEKSK-LLSEIETAQADLLKITQEndalrssestlLQQLKELQ 1193
Cdd:TIGR01612 776 KEKDELNKYKSKISEIKNHYNDQINIDNIkdEDAKQNYDKSKeYIKTISIKEDEIFKIINE-----------MKFMKDDF 844
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1194 ANKDAVDVACQKHIKEREELEHYQKlleeNDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSiltaerdSAQEKDLDLK 1273
Cdd:TIGR01612 845 LNKVDKFINFENNCKEKIDSEHEQF----AELTNKIKAEISDDKLNDYEKKFNDSKSLINEIN-------KSIEEEYQNI 913
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1274 STHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDnmdlkASL 1353
Cdd:TIGR01612 914 NTLKKVDEYIKICENTKESIEKFHNKQNILKEILNKNIDTIKESNLIEKSYKDKFDNTLIDKINELDKAFKD-----ASL 988
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1354 SSLsnfleemkssrEASNSEKIHL---LQEALFASEQRLL----AEREELVNEnkaVTEKLTKATADAVLAETAFTEKIN 1426
Cdd:TIGR01612 989 NDY-----------EAKNNELIKYfndLKANLGKNKENMLyhqfDEKEKATND---IEQKIEDANKNIPNIEIAIHTSIY 1054
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1427 ELNLEKESVFSKSLqfEKHNEALLREKDELERKYSELlDEKKSLENaFSDMKREQELDFS-----AKRLLVQENTTLKYS 1501
Cdd:TIGR01612 1055 NIIDEIEKEIGKNI--ELLNKEILEEAEINITNFNEI-KEKLKHYN-FDDFGKEENIKYAdeinkIKDDIKNLDQKIDHH 1130
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1502 IEALEEELKKKNLENQELIACRSDLSDLLKEA------QDARRTLENELAAVSHAKQVLSSsFNTCSSDIEILNRERTEL 1575
Cdd:TIGR01612 1131 IKALEEIKKKSENYIDEIKAQINDLEDVADKAisnddpEEIEKKIENIVTKIDKKKNIYDE-IKKLLNEIAEIEKDKTSL 1209
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1576 QdkcqkltgEVENMkeNLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMRE-KNKEFLTEKELLVQEKEKSETKLE 1654
Cdd:TIGR01612 1210 E--------EVKGI--NLSYGKNLGKLFLEKIDEEKKKSEHMIKAMEAYIEDLDEiKEKSPEIENEMGIEMDIKAEMETF 1279
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1655 EV----IKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDV--------------HSCVSVMLDELQHKYEVTEKEK 1716
Cdd:TIGR01612 1280 NIshddDKDHHIISKKHDENISDIREKSLKIIEDFSEESDINDIkkelqknlldaqkhNSDINLYLNEIANIYNILKLNK 1359
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1717 M--------ELVQENESLHAEWKSLVIINEEILKE-KEKLSKEYYKlhEKVVALLEQTDADfSCRLLVSEGKHELLLEEM 1787
Cdd:TIGR01612 1360 IkkiidevkEYTKEIEENNKNIKDELDKSEKLIKKiKDDINLEECK--SKIESTLDDKDID-ECIKKIKELKNHILSEES 1436
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1788 SNLAL--KLREIERLQAQTFMQKFEADKRAEEVLQTmekvtkEKDAIHQEKIETLASLENSRQTNEKLQNELDmlkqnnl 1865
Cdd:TIGR01612 1437 NIDTYfkNADENNENVLLLFKNIEMADNKSQHILKI------KKDNATNDHDFNINELKEHIDKSKGCKDEAD------- 1503
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1866 KNEEELTKSKELLNLENKKVEELKKEFEALKL------AAAQKSQQLAALQEENVKLAEELGRSRDEVTS--HQKLEEER 1937
Cdd:TIGR01612 1504 KNAKAIEKNKELFEQYKKDVTELLNKYSALAIknkfakTKKDSEIIIKEIKDAHKKFILEAEKSEQKIKEikKEKFRIED 1583
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1938 SVLNNQ-----LLEMKKSL---PSNTLRESTLKKEIDE---ERASLQKSISDTSalITQKDEELEKLRNEITvlrgenas 2006
Cdd:TIGR01612 1584 DAAKNDksnkaAIDIQLSLenfENKFLKISDIKKKINDclkETESIEKKISSFS--IDSQDTELKENGDNLN-------- 1653
|
1290 1300
....*....|....*....|....*..
gi 2024359618 2007 akTLQSVVKTLESDKLKLEEKVKNLEQ 2033
Cdd:TIGR01612 1654 --SLQEFLESLKDQKKNIEDKKKELDE 1678
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
834-1064 |
8.22e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 53.61 E-value: 8.22e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 834 LSAVNQVKDSLEKELQLLKEkftsavdgaenaqramqvmetKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMK 913
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQ---------------------EIAELEKELAALKKEEKALLKQLAALERRIAALARRIRA 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 914 MNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQ---TAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYK 990
Cdd:COG4942 74 LEQELAALEAELAELEKEIAELRAELEAQKEELAEllrALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAE 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 991 DLQAKYE--KETSEMITKHDADIKGFKQNLLDAEEALKAAQKK--------NDELETQAEELKKQAEQAKSLSSVLASAR 1060
Cdd:COG4942 154 ELRADLAelAALRAELEAERAELEALLAELEEERAALEALKAErqkllarlEKELAELAAELAELQQEAEELEALIARLE 233
|
....
gi 2024359618 1061 KEIE 1064
Cdd:COG4942 234 AEAA 237
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
703-1235 |
9.19e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 54.28 E-value: 9.19e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 703 VTEEKEQTLENLKAKLESVEDQHLVEmedtlnKLQEAEIKVKELDVLQAKCNEQTkligsltqqiRASEEKLLDLAALQK 782
Cdd:PRK02224 181 VLSDQRGSLDQLKAQIEEKEEKDLHE------RLNGLESELAELDEEIERYEEQR----------EQARETRDEADEVLE 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 783 ANSEGKLEIQKLSEQLQAAEKQIQNLETEKvSNLTKELQGKEQKLLDLEKNLS--------------AVNQVKDSLEKEL 848
Cdd:PRK02224 245 EHEERREELETLEAEIEDLRETIAETERER-EELAEEVRDLRERLEELEEERDdllaeaglddadaeAVEARREELEDRD 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 849 ----QLLKEKFTSAVDGAENAQRAMQvmetKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQ 924
Cdd:PRK02224 324 eelrDRLEECRVAAQAHNEEAESLRE----DADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRER 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 925 LEQIQLELTKANEKAVQLQKNVEQTAQKaEQSQQETLKTHQEELKKMQdQLTDMKKQMETSQNQYKDLQAKYEKETSEMI 1004
Cdd:PRK02224 400 FGDAPVDLGNAEDFLEELREERDELRER-EAELEATLRTARERVEEAE-ALLEAGKCPECGQPVEGSPHVETIEEDRERV 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1005 TKHDADIkgfkqnlldaeEALKAAQKKNDELETQAEELKKQAEQAKSlssvLASARKEIELMSDKMRDLISEKETLAQER 1084
Cdd:PRK02224 478 EELEAEL-----------EDLEEEVEEVEERLERAEDLVEAEDRIER----LEERREDLEELIAERRETIEEKRERAEEL 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1085 NTLKLEKESllsqhlEMESKILLVQQDREELWTKNEELNSENKKIlkqkeaAEAKSRQESTEKVA-LISEKSKLLSEIET 1163
Cdd:PRK02224 543 RERAAELEA------EAEEKREAAAEAEEEAEEAREEVAELNSKL------AELKERIESLERIRtLLAAIADAEDEIER 610
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024359618 1164 AQADLLKITQENDALRSSESTLLQQLKELQANKDavDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQ 1235
Cdd:PRK02224 611 LREKREALAELNDERRERLAEKRERKRELEAEFD--EARIEEAREDKERAEEYLEQVEEKLDELREERDDLQ 680
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
789-1344 |
1.03e-06 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 54.14 E-value: 1.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 789 LEIQKLSEQLQAAEKQIQNLETEkVSN---LTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENA 865
Cdd:PRK01156 159 LEINSLERNYDKLKDVIDMLRAE-ISNidyLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNL 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 866 QRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGdSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKN 945
Cdd:PRK01156 238 KSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNYYKE-LEERHMKIINDPVYKNRNYINDYFKYKNDIENKKQILSN 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 946 VEQTAQKAEQSQQETlkthqEELKKMQDQLTDMKKQMETSQNQYKDLqakyekETSEMitKHDADIKGFKQNLLDAEEAL 1025
Cdd:PRK01156 317 IDAEINKYHAIIKKL-----SVLQKDYNDYIKKKSRYDDLNNQILEL------EGYEM--DYNSYLKSIESLKKKIEEYS 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1026 KAAQKKNDELetqAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQ-----ERNTLKLEKES---LLSQ 1097
Cdd:PRK01156 384 KNIERMSAFI---SEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALREnldelSRNMEMLNGQSvcpVCGT 460
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1098 HLEMESKILLVQQDREELWTKNEE----------LNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQAD 1167
Cdd:PRK01156 461 TLGEEKSNHIINHYNEKKSRLEEKireieievkdIDEKIVDLKKRKEYLESEEINKSINEYNKIESARADLEDIKIKINE 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1168 L----LKITQENDALRSSESTLLQQLKE----LQANKDAVDVACQKHIKE--REELEHYQKLLEENDRVIKDKDDVIQRL 1237
Cdd:PRK01156 541 LkdkhDKYEEIKNRYKSLKLEDLDSKRTswlnALAVISLIDIETNRSRSNeiKKQLNDLESRLQEIEIGFPDDKSYIDKS 620
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1238 QSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANE 1317
Cdd:PRK01156 621 IREIENEANNLNNKYNEIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARL 700
|
570 580 590
....*....|....*....|....*....|
gi 2024359618 1318 N---QALKLRKDEMQTELETEREKLEKMTK 1344
Cdd:PRK01156 701 EstiEILRTRINELSDRINDINETLESMKK 730
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
354-633 |
1.20e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 53.91 E-value: 1.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 354 LQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRdghdRHVLEMEAKMDQLRAMVEAADREKVELLNQLE 433
Cdd:TIGR02168 773 AEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLN----EEAANLRERLESLERRIAATERRLEDLEEQIE 848
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 434 EEKRKVEDLQFRVEEESITKGDLERKRQISEDpentqtklEHARIKELEQSLLFEKTKADKLQRELEdtrvatvsekSRI 513
Cdd:TIGR02168 849 ELSEDIESLAAEIEELEELIEELESELEALLN--------ERASLEEALALLRSELEELSEELRELE----------SKR 910
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 514 MELERDLALRVKEVAELRGRLEsskhiddvdtslSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLS 593
Cdd:TIGR02168 911 SELRRELEELREKLAQLELRLE------------GLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLE 978
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 2024359618 594 ASNERMGKEN-------ESLKTKLDHANKENSDVIELwKSKLESAIA 633
Cdd:TIGR02168 979 NKIKELGPVNlaaieeyEELKERYDFLTAQKEDLTEA-KETLEEAIE 1024
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
353-886 |
1.22e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.89 E-value: 1.22e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 353 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlvrdghdrHVLEMEAKMDQLRAMVEAADREKVELLNQL 432
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERRE--------ELETLEAEIEDLRETIAETEREREELAEEV 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 433 EEEKRKVEDLQfrvEEESITKGDLERKRQISEDPEntqtklehARIKELEqsllfekTKADKLQRELEDTRV---ATVSE 509
Cdd:PRK02224 282 RDLRERLEELE---EERDDLLAEAGLDDADAEAVE--------ARREELE-------DRDEELRDRLEECRVaaqAHNEE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 510 KSRIMELERDLALRVKEVAELRGRLESS-----KHIDDVDTSLSLL-QEISSLQEKMAAAGKEHQrEMSSLKEKFESSEE 583
Cdd:PRK02224 344 AESLREDADDLEERAEELREEAAELESEleearEAVEDRREEIEELeEEIEELRERFGDAPVDLG-NAEDFLEELREERD 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 584 ALRKEIKTLSASNERMGKENESLKTKLDhANKENSDVIELWKSKLESAIASHQQAMEELkvsfnkgvgaqTAEFAELKTQ 663
Cdd:PRK02224 423 ELREREAELEATLRTARERVEEAEALLE-AGKCPECGQPVEGSPHVETIEEDRERVEEL-----------EAELEDLEEE 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 664 MEKVKLDYENEMSNLKLKQENEKSQHLKE-IEALKAKLLEVTEEKEQTLENLKAKLESVEDqhlvEMEDTLNKLQEAEIK 742
Cdd:PRK02224 491 VEEVEERLERAEDLVEAEDRIERLEERREdLEELIAERRETIEEKRERAEELRERAAELEA----EAEEKREAAAEAEEE 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 743 VKELDVLQAKCNEQtkligslTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQA-AEKQIQNLET-----EKVSNL 816
Cdd:PRK02224 567 AEEAREEVAELNSK-------LAELKERIESLERIRTLLAAIADAEDEIERLREKREAlAELNDERRERlaekrERKREL 639
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024359618 817 TKELQGK--EQKLLDLEKNLSAVNQVKDSLEkELQLLKEKFTSAVDGAENAQRAMQVMETKLKEREEREQQL 886
Cdd:PRK02224 640 EAEFDEAriEEAREDKERAEEYLEQVEEKLD-ELREERDDLQAEIGAVENELEELEELRERREALENRVEAL 710
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1502-2052 |
1.41e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 53.49 E-value: 1.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1502 IEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSH---AKQVLSSSFNTCSSDIEILNRERTELQDK 1578
Cdd:TIGR04523 147 IKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNkllKLELLLSNLKKKIQKNKSLESQISELKKQ 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1579 CQKLTGEVENMKENLtVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEkekSETKLEEVIK 1658
Cdd:TIGR04523 227 NNQLKDNIEKKQQEI-NEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQ---LKSEISDLNN 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1659 EKMilyketeqlASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINE 1738
Cdd:TIGR04523 303 QKE---------QDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIE 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1739 EILKEKEKLSKEYYKLHEKVVALLEQtdadFSCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEE- 1817
Cdd:TIGR04523 374 KLKKENQSYKQEIKNLESQINDLESK----IQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQd 449
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1818 -VLQTMEKVTKEKDAIHQEKIETL-ASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEAL 1895
Cdd:TIGR04523 450 sVKELIIKNLDNTRESLETQLKVLsRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKL 529
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1896 KLAAAQKSQQLAALQEENVKLAEELGRSrdevtshqKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEerasLQKS 1975
Cdd:TIGR04523 530 ESEKKEKESKISDLEDELNKDDFELKKE--------NLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQ----KEKE 597
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024359618 1976 ISDTSALITQKDEELEKLRNEITVLRGENasaktlqsvvKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSGDI 2052
Cdd:TIGR04523 598 KKDLIKEIEEKEKKISSLEKELEKAKKEN----------EKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEI 664
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
949-1166 |
1.59e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 52.91 E-value: 1.59e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 949 TAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKyeketsemITKHDADIKGFKQNLLDAEEALKAA 1028
Cdd:COG3883 13 FADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAE--------LEALQAEIDKLQAEIAEAEAEIEER 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1029 QkknDELETQAEELKKQAEQAKSLSSVLASA------------RKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLS 1096
Cdd:COG3883 85 R---EELGERARALYRSGGSVSYLDVLLGSEsfsdfldrlsalSKIADADADLLEELKADKAELEAKKAELEAKLAELEA 161
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1097 QHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQA 1166
Cdd:COG3883 162 LKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAA 231
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1497-2019 |
1.71e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.51 E-value: 1.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1497 TLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLEnelaavshakqVLSSSFNTCSSDIEILNRERTELQ 1576
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELE-----------TLEAEIEDLRETIAETEREREELA 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1577 DKCQKLTGEVENMKENLT---VEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKL 1653
Cdd:PRK02224 279 EEVRDLRERLEELEEERDdllAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERA 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1654 EEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKSL 1733
Cdd:PRK02224 359 EELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTA 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1734 viinEEILKEKEKLskeyykLHEKVVALLEQT--DADFSCRLLVSEGKHELLLEEMSNLALKLREIE-RLQAQTFMQKFE 1810
Cdd:PRK02224 439 ----RERVEEAEAL------LEAGKCPECGQPveGSPHVETIEEDRERVEELEAELEDLEEEVEEVEeRLERAEDLVEAE 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1811 AD-KRAEEVLQTMEKVTKEKDAIHQEKIETLASLensRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELK 1889
Cdd:PRK02224 509 DRiERLEERREDLEELIAERRETIEEKRERAEEL---RERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELK 585
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1890 KEFEALK------LAAAQKSQQLAALQEENVKLAEELGRSRDEVTS----HQKLEEERSVLNNQLLEMKKSLPSNTLRES 1959
Cdd:PRK02224 586 ERIESLErirtllAAIADAEDEIERLREKREALAELNDERRERLAEkrerKRELEAEFDEARIEEAREDKERAEEYLEQV 665
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024359618 1960 TLK-KEIDEERASLQKSIsdtsALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLES 2019
Cdd:PRK02224 666 EEKlDELREERDDLQAEI----GAVENELEELEELRERREALENRVEALEALYDEAEELES 722
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
683-1048 |
2.19e-06 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 53.42 E-value: 2.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 683 ENEKSQHLKEIEALKAKLLEVTEE---KEQTLENLKAKL-ESVEDQHLVEME-----DTLNKLQEAEIK-------VKEL 746
Cdd:PRK04863 278 ANERRVHLEEALELRRELYTSRRQlaaEQYRLVEMARELaELNEAESDLEQDyqaasDHLNLVQTALRQqekieryQADL 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 747 DVLQAKCNEQTKLIGSLTQQIRASEEKL------LDLAALQKANSEGKLEIQ-----KLSEQLQAAEK-----QIQNLET 810
Cdd:PRK04863 358 EELEERLEEQNEVVEEADEQQEENEARAeaaeeeVDELKSQLADYQQALDVQqtraiQYQQAVQALERakqlcGLPDLTA 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 811 EKVSNLTKELQGKEQ----KLLDLEKNLSAVNQVKDSLEKELQLLKekftsAVDGAENAQRAMQVMETKLKEREErEQQL 886
Cdd:PRK04863 438 DNAEDWLEEFQAKEQeateELLSLEQKLSVAQAAHSQFEQAYQLVR-----KIAGEVSRSEAWDVARELLRRLRE-QRHL 511
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 887 TEAKVKLENDIAEImkssgdssaqlmkmndELRL-KERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQsqqeTLKTHQ 965
Cdd:PRK04863 512 AEQLQQLRMRLSEL----------------EQRLrQQQRAERLLAEFCKRLGKNLDDEDELEQLQEELEA----RLESLS 571
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 966 EELKKMQDQLTDMKKQMETSQNQYKDL----------QAKYEK---------ETSEMITkhdadikGFKQNLLdaeEALK 1026
Cdd:PRK04863 572 ESVSEARERRMALRQQLEQLQARIQRLaarapawlaaQDALARlreqsgeefEDSQDVT-------EYMQQLL---ERER 641
|
410 420
....*....|....*....|..
gi 2024359618 1027 AAQKKNDELETQAEELKKQAEQ 1048
Cdd:PRK04863 642 ELTVERDELAARKQALDEEIER 663
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
859-1368 |
2.41e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 53.14 E-value: 2.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 859 VDGAENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQ---LELTKA 935
Cdd:PRK03918 157 LDDYENAYKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEkevKELEEL 236
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 936 NEKAVQLQKNVEQTAQKAE---------QSQQETLKTHQEELKKMQDQLTDMKKQMETSQ--NQYKDLQAKYEKETSEMI 1004
Cdd:PRK03918 237 KEEIEELEKELESLEGSKRkleekirelEERIEELKKEIEELEEKVKELKELKEKAEEYIklSEFYEEYLDELREIEKRL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1005 TKHDADIKGFKQNLLDAEEA---LKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARK--------EIELMSDKMRDL 1073
Cdd:PRK03918 317 SRLEEEINGIEERIKELEEKeerLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERlkkrltglTPEKLEKELEEL 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1074 ISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAE-AKSRQESTEKVALIS 1152
Cdd:PRK03918 397 EKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELLEEYTAElKRIEKELKEIEEKER 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1153 EKSKLLSEIETA---QADLLKITQENDALRSSESTLLQ-QLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIK 1228
Cdd:PRK03918 477 KLRKELRELEKVlkkESELIKLKELAEQLKELEEKLKKyNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKK 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1229 DKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELC 1308
Cdd:PRK03918 557 KLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELA 636
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024359618 1309 VSLANTAN-ENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSRE 1368
Cdd:PRK03918 637 ETEKRLEElRKELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLE 697
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
968-1518 |
2.58e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 52.73 E-value: 2.58e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 968 LKKMQDQLTDMKKQMEtsQNQYKDLQAK---YEKETSEMitkhDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKK 1044
Cdd:PRK02224 182 LSDQRGSLDQLKAQIE--EKEEKDLHERlngLESELAEL----DEEIERYEEQREQARETRDEADEVLEEHEERREELET 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1045 QAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTL-------KLEKESLLSQHLEMESKILLVQQDREELWT 1117
Cdd:PRK02224 256 LEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLlaeagldDADAEAVEARREELEDRDEELRDRLEECRV 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1118 KNEELNSENKKILkqKEAAEAKSRQESTEkvaliSEKSKLLSEIETAQADLLKITQENDALRSsestllqqlkELQANKD 1197
Cdd:PRK02224 336 AAQAHNEEAESLR--EDADDLEERAEELR-----EEAAELESELEEAREAVEDRREEIEELEE----------EIEELRE 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1198 AVDVACQkhikEREELEHYQKLLEEN-DRVIKDKDDVIQRLQSSYDDLARNQR--------ELLQEVS----ILTAERDS 1264
Cdd:PRK02224 399 RFGDAPV----DLGNAEDFLEELREErDELREREAELEATLRTARERVEEAEAlleagkcpECGQPVEgsphVETIEEDR 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1265 AQEKDL-----DLKSTHIALKNEIDcLLQTNRSLQSEKEMLLKSRE---ELCVSLANTANEN----QALKLRKDEMQTEL 1332
Cdd:PRK02224 475 ERVEELeaeleDLEEEVEEVEERLE-RAEDLVEAEDRIERLEERREdleELIAERRETIEEKreraEELRERAAELEAEA 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1333 ETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNS-EKIHLLQEALFASEQRLLAEREELVNENKAVTEKL-TKA 1410
Cdd:PRK02224 554 EEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERiRTLLAAIADAEDEIERLREKREALAELNDERRERLaEKR 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1411 TADAVLAETAFTEKINELNLEKEsvfskslQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKR-EQELDFSAKR 1489
Cdd:PRK02224 634 ERKRELEAEFDEARIEEAREDKE-------RAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEElRERREALENR 706
|
570 580 590
....*....|....*....|....*....|....
gi 2024359618 1490 L-----LVQENTTLKYSIEALEEELKKKNLENQE 1518
Cdd:PRK02224 707 VealeaLYDEAEELESMYGDLRAELRQRNVETLE 740
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
680-1192 |
2.62e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 53.05 E-value: 2.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 680 LKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKlESVEDQHLVEMEDTlnklQEAEIKVKELDVLQAKCNEQtkl 759
Cdd:TIGR00618 381 IHTLQQQKTTLTQKLQSLCKELDILQREQATIDTRTSA-FRDLQGQLAHAKKQ----QELQQRYAELCAAAITCTAQ--- 452
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 760 igSLTQQIRASEEKLLDLAAL--QKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQKLLDLEKNLSAV 837
Cdd:TIGR00618 453 --CEKLEKIHLQESAQSLKEReqQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRM 530
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 838 NQVKDSLEKELQLLKEKFTSAVDGAENAQRamqvmetkLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMND- 916
Cdd:TIGR00618 531 QRGEQTYAQLETSEEDVYHQLTSERKQRAS--------LKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEk 602
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 917 ELRLKERQLEQIQLELTKANEKAVQLQKNVEQtAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDL-QAK 995
Cdd:TIGR00618 603 LSEAEDMLACEQHALLRKLQPEQDLQDVRLHL-QQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASrQLA 681
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 996 YEKETSEmitkhdadikgfKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQaksLSSVLASARKEIELMSDKMRDLIS 1075
Cdd:TIGR00618 682 LQKMQSE------------KEQLTYWKEMLAQCQTLLRELETHIEEYDREFNE---IENASSSLGSDLAAREDALNQSLK 746
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1076 EKE----------TLAQERNTLKLEKESLLSQHL-----EMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKS 1140
Cdd:TIGR00618 747 ELMhqartvlkarTEAHFNNNEEVTAALQTGAELshlaaEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETL 826
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|..
gi 2024359618 1141 RQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKEL 1192
Cdd:TIGR00618 827 VQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQAKIIQLSDKL 878
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
661-1244 |
2.63e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 52.73 E-value: 2.63e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 661 KTQMEKVKLDYENEMSNLKLKQENEKSQHLKE-IEALKAKLLEVTEEKE----------QTLENLKAKLESVEDqhlvem 729
Cdd:PRK02224 175 RLGVERVLSDQRGSLDQLKAQIEEKEEKDLHErLNGLESELAELDEEIEryeeqreqarETRDEADEVLEEHEE------ 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 730 edtlnKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAAlqkANSEGKLEIQKLSEQLQAAEKQIQNLE 809
Cdd:PRK02224 249 -----RREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEE---ERDDLLAEAGLDDADAEAVEARREELE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 810 TEKVSnLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVMETKLKEREEREQQLTEA 889
Cdd:PRK02224 321 DRDEE-LRDRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRER 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 890 KvkleNDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQK--NVEQTAQKAEQSQQ-ETLKTHQE 966
Cdd:PRK02224 400 F----GDAPVDLGNAEDFLEELREERDELREREAELEATLRTARERVEEAEALLEagKCPECGQPVEGSPHvETIEEDRE 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 967 ELKKMQDQLTDMKKQMETSQNQYKdlQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQA 1046
Cdd:PRK02224 476 RVEELEAELEDLEEEVEEVEERLE--RAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEA 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1047 EQAKslsSVLASARKEIELMSDKMRDLISEKETLAQERNTLKlEKESLLSQHLEMESKILLVQQDREELwtknEELNSEN 1126
Cdd:PRK02224 554 EEKR---EAAAEAEEEAEEAREEVAELNSKLAELKERIESLE-RIRTLLAAIADAEDEIERLREKREAL----AELNDER 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1127 KKILKQKEaaEAKSRQESTEKVALISEkskLLSEIETAQADLLKITQENDALRSSESTLLQQLKelqankdavdvACQKH 1206
Cdd:PRK02224 626 RERLAEKR--ERKRELEAEFDEARIEE---AREDKERAEEYLEQVEEKLDELREERDDLQAEIG-----------AVENE 689
|
570 580 590
....*....|....*....|....*....|....*...
gi 2024359618 1207 IKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDL 1244
Cdd:PRK02224 690 LEELEELRERREALENRVEALEALYDEAEELESMYGDL 727
|
|
| AAA_13 |
pfam13166 |
AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA ... |
640-848 |
2.86e-06 |
|
AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. This family includes the PrrC protein that is thought to be the active component of the anticodon nuclease.
Pssm-ID: 463796 [Multi-domain] Cd Length: 712 Bit Score: 52.76 E-value: 2.86e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 640 EELKVSFNKgvgaqtaEFAELKTQMEKVKLDYENEMSNL--KLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAK 717
Cdd:pfam13166 271 AALEAHFDD-------EFTEFQNRLQKLIEKVESAISSLlaQLPAVSDLASLLSAFELDVEDIESEAEVLNSQLDGLRRA 343
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 718 LESVEDQ--HLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLdlaalqkaNSEGKLEIQKLS 795
Cdd:pfam13166 344 LEAKRKDpfKSIELDSVDAKIESINDLVASINELIAKHNEITDNFEEEKNKAKKKLRLHL--------VEEFKSEIDEYK 415
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 2024359618 796 EQLQAAEKQIQNLETEKvSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKEL 848
Cdd:pfam13166 416 DKYAGLEKAINSLEKEI-KNLEAEIKKLREEIKELEAQLRDHKPGADEINKLL 467
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
824-1043 |
2.88e-06 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 52.32 E-value: 2.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 824 EQKLLDLEKNLsaVNQVKDSLEKELQLLKEKftsavdGAENAQRAMQVMETKLKEREEREQQLTEakvkLENDIAEIMKS 903
Cdd:PHA02562 182 QIQTLDMKIDH--IQQQIKTYNKNIEEQRKK------NGENIARKQNKYDELVEEAKTIKAEIEE----LTDELLNLVMD 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 904 SGDSSAQLMKMNDELRLKERQLEQIQLE-----------------------LTKANEKAVQLQKNVEQ--TAQKAEQSQQ 958
Cdd:PHA02562 250 IEDPSAALNKLNTAAAKIKSKIEQFQKVikmyekggvcptctqqisegpdrITKIKDKLKELQHSLEKldTAIDELEEIM 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 959 ETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITkHDADIKGFKQNLLDAEEALKAAQKKNDELETQ 1038
Cdd:PHA02562 330 DEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVD-NAEELAKLQDELDKIVKTKSELVKEKYHRGIV 408
|
....*
gi 2024359618 1039 AEELK 1043
Cdd:PHA02562 409 TDLLK 413
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
342-854 |
3.16e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 52.76 E-value: 3.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 342 SRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVrDGHDRHVLEMEAKMDQLRAMVEAA 421
Cdd:PRK03918 179 ERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKEL-EELKEEIEELEKELESLEGSKRKL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 422 DREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEDPENTQTKL-----EHARIKELEQSLLFEKTKADKLQ 496
Cdd:PRK03918 258 EEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELreiekRLSRLEEEINGIEERIKELEEKE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 497 RELEDTRVATVSEKSRIMELERDLAL--RVKEVAELRGRLESSKHIDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSSL 574
Cdd:PRK03918 338 ERLEELKKKLKELEKRLEELEERHELyeEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGEL 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 575 KEKFESSEEAL-----------------------------RKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELwk 625
Cdd:PRK03918 418 KKEIKELKKAIeelkkakgkcpvcgrelteehrkelleeyTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESEL-- 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 626 SKLESAIASHQQAMEELKVSFNKGVGAQTAEFAELKTQMEKVKLDYENEMSNLKLKQENEKSqhlkeiealKAKLLEVTE 705
Cdd:PRK03918 496 IKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKK---------LAELEKKLD 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 706 EKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLldlaalqkanS 785
Cdd:PRK03918 567 ELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEEL----------A 636
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024359618 786 EGKLEIQKLSEQLQAAEKQIQNLETEKVSN----LTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEK 854
Cdd:PRK03918 637 ETEKRLEELRKELEELEKKYSEEEYEELREeyleLSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKA 709
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
775-1196 |
4.01e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 52.22 E-value: 4.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 775 LDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLEtEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKE------L 848
Cdd:PRK11281 45 LDALNKQKLLEAEDKLVQQDLEQTLALLDKIDRQK-EETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETREtlstlsL 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 849 QLLKEKFTSAVDGAENAQRAMQVMETKL---KEREEREQ-QLTEAKVKLEnDIAEIMKSSGDSSAQL-----MKMNDELR 919
Cdd:PRK11281 124 RQLESRLAQTLDQLQNAQNDLAEYNSQLvslQTQPERAQaALYANSQRLQ-QIRNLLKGGKVGGKALrpsqrVLLQAEQA 202
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 920 LKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQEtLKTHQEELKkmQDQLTDMKKQMETSQNQykdlQAKYEKE 999
Cdd:PRK11281 203 LLNAQNDLQRKSLEGNTQLQDLLQKQRDYLTARIQRLEHQ-LQLLQEAIN--SKRLTLSEKTVQEAQSQ----DEAARIQ 275
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1000 TSEMITKHDADIKGFKQNLLDAEEALKAAQKKN-------DELeTQAEELKKqaEQAKSLSSVLASAR------------ 1060
Cdd:PRK11281 276 ANPLVAQELEINLQLSQRLLKATEKLNTLTQQNlrvknwlDRL-TQSERNIK--EQISVLKGSLLLSRilyqqqqalpsa 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1061 KEIELMSDKMRDLISEKETLAQERNTLklekeSLLSQHLEMeskilLVQQDreelwtkNEELNSENKKILKQKeaaeAKS 1140
Cdd:PRK11281 353 DLIEGLADRIADLRLEQFEINQQRDAL-----FQPDAYIDK-----LEAGH-------KSEVTDEVRDALLQL----LDE 411
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359618 1141 RQESTEKvaLISEKSKLLSEIETAQADLLKITQENDALRsseSTLLQQLKELQANK 1196
Cdd:PRK11281 412 RRELLDQ--LNKQLNNQLNLAINLQLNQQQLLSVSDSLQ---STLTQQIFWVNSNK 462
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
676-910 |
4.70e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 51.30 E-value: 4.70e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 676 SNLKLKQENEKSQHLKEIEALKAKLlevtEEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQeaeikvKELDVLQAKCNE 755
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKEL----AALKKEEKALLKQLAALERR-IAALARRIRALE------QELAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 756 QTKLIGSLTQQIRASEEKLLD-LAALQKANSEGKLEIQKLSEQLQAAEKQIQNL---------ETEKVSNLTKELQGKEQ 825
Cdd:COG4942 88 LEKEIAELRAELEAQKEELAElLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLkylaparreQAEELRADLAELAALRA 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 826 KLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSG 905
Cdd:COG4942 168 ELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAG 247
|
....*
gi 2024359618 906 DSSAQ 910
Cdd:COG4942 248 FAALK 252
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1362-2041 |
6.05e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.89 E-value: 6.05e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1362 EMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKS-- 1439
Cdd:TIGR00618 179 TQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLkk 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1440 -------------LQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKRE----QELDFSAKRLLVQENTTLKYSI 1502
Cdd:TIGR00618 259 qqllkqlrarieeLRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIhtelQSKMRSRAKLLMKRAAHVKQQS 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1503 EALEEELKKKNLENQE-LIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRErtelQDKCQK 1581
Cdd:TIGR00618 339 SIEEQRRLLQTLHSQEiHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQRE----QATIDT 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1582 LTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEK---EKSETKLEEVIK 1658
Cdd:TIGR00618 415 RTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEqihLQETRKKAVVLA 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1659 EKMILYKETEQLASKIEQLKSDFTSLSVSKA------ELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKS 1732
Cdd:TIGR00618 495 RLLELQEEPCPLCGSCIHPNPARQDIDNPGPltrrmqRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSI 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1733 LVIINEEILKEKEKLSKEyyklhekVVALLEQTDADFSCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEAD 1812
Cdd:TIGR00618 575 LTQCDNRSKEDIPNLQNI-------TVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTA 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1813 KRAEEVLQTMEKVTKEKDAIHQEKIETLASlensrqtNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEF 1892
Cdd:TIGR00618 648 LHALQLTLTQERVREHALSIRVLPKELLAS-------RQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREF 720
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1893 EALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKeidEERASL 1972
Cdd:TIGR00618 721 NEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFN---RLREED 797
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024359618 1973 QKSISDTSALITQK--DEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQ 2041
Cdd:TIGR00618 798 THLLKTLEAEIGQEipSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQ 868
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
819-1059 |
6.26e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 50.98 E-value: 6.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 819 ELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVMETKLKEREEREQQLTEakvKLENDIA 898
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERRE---ELGERAR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 899 EIMKSSGDSSAQLMKMN----DELrlkerqLEQIQL--ELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQ 972
Cdd:COG3883 94 ALYRSGGSVSYLDVLLGsesfSDF------LDRLSAlsKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELE 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 973 DQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSL 1052
Cdd:COG3883 168 AAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAASAA 247
|
....*..
gi 2024359618 1053 SSVLASA 1059
Cdd:COG3883 248 GAGAAGA 254
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
687-983 |
6.85e-06 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 51.44 E-value: 6.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 687 SQHLKEIEALKAKLLEVTEEKEQ----TLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKELDVLQakcneqtkligs 762
Cdd:PLN02939 102 MQRDEAIAAIDNEQQTNSKDGEQlsdfQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQ------------ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 763 ltQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQN---LETEKVSNLTKELQG-KEQKLL---DLEKNLS 835
Cdd:PLN02939 170 --GKINILEMRLSETDARIKLAAQEKIHVEILEEQLEKLRNELLIrgaTEGLCVHSLSKELDVlKEENMLlkdDIQFLKA 247
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 836 AVNQVKDSLEKELQLLKEKftSAVDGaenaqrAMQVMETKLKEREEREQQLTEAKV-----KLEN--DIAEIMKSSGDSS 908
Cdd:PLN02939 248 ELIEVAETEERVFKLEKER--SLLDA------SLRELESKFIVAQEDVSKLSPLQYdcwweKVENlqDLLDRATNQVEKA 319
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 909 AQLMKMNDELRLKERQLEQiqlELTKAN------EKAVQLQKNVEQTAQKAEQSQQET---LKTHQEELKKMQDQLTDMK 979
Cdd:PLN02939 320 ALVLDQNQDLRDKVDKLEA---SLKEANvskfssYKVELLQQKLKLLEERLQASDHEIhsyIQLYQESIKEFQDTLSKLK 396
|
....
gi 2024359618 980 KQME 983
Cdd:PLN02939 397 EESK 400
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1045-1268 |
1.08e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.15 E-value: 1.08e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1045 QAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNS 1124
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1125 ---ENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQEN-DALRSSESTLLQQLKELQANKDAVD 1200
Cdd:COG4942 98 eleAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQaEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359618 1201 VACQKHIKEREELEhyqKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEK 1268
Cdd:COG4942 178 ALLAELEEERAALE---ALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
357-531 |
1.26e-05 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 50.63 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 357 ALKEKQQHIEQLLAE---RDLERAEVAKATS-----------HVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEAAD 422
Cdd:COG2433 347 AYKNKFERVEKKVPPdvdRDEVKARVIRGLSieealeeliekELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLE 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 423 REKVELLNQLEEEKRKVEDLQFRVEEESItkgdlERKRQISEDPEntQTKLEhARIKELEQSLLFEKTKADKLQRELEDT 502
Cdd:COG2433 427 AEVEELEAELEEKDERIERLERELSEARS-----EERREIRKDRE--ISRLD-REIERLERELEEERERIEELKRKLERL 498
|
170 180 190
....*....|....*....|....*....|
gi 2024359618 503 RvatvseksRIMELE-RDLALRVKEVAELR 531
Cdd:COG2433 499 K--------ELWKLEhSGELVPVKVVEKFT 520
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1659-2048 |
1.51e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 50.12 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1659 EKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDvhSCVSVMLDELQHKYEVTEKEKMELVQ--ENESLHAEwkslvii 1736
Cdd:pfam17380 234 EKMERRKESFNLAEDVTTMTPEYTVRYNGQTMTEN--EFLNQLLHIVQHQKAVSERQQQEKFEkmEQERLRQE------- 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1737 NEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSCRLLVSEGKHELlleEMSNLALKLREIERLQAQTFMQKFEADKRAE 1816
Cdd:pfam17380 305 KEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMEREREL---ERIRQEERKRELERIRQEEIAMEISRMRELE 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1817 ----EVLQTMEKVTKEKDAIHQEKIetlasLENSRQTNEKLQneldMLKQNNLKNEEELTKSKELLNLEnkkvEELKKEF 1892
Cdd:pfam17380 382 rlqmERQQKNERVRQELEAARKVKI-----LEEERQRKIQQQ----KVEMEQIRAEQEEARQREVRRLE----EERAREM 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1893 EALKLAAAQKSQQLAAL-QEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERAS 1971
Cdd:pfam17380 449 ERVRLEEQERQQQVERLrQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKRKLLEKEMEERQKA 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1972 L----QKSISDTSALITQKDEELEKLRNEITVLRGEnasaktlQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTS 2047
Cdd:pfam17380 529 IyeeeRRREAEEERRKQQEMEERRRIQEQMRKATEE-------RSRLEAMEREREMMRQIVESEKARAEYEATTPITTIK 601
|
.
gi 2024359618 2048 P 2048
Cdd:pfam17380 602 P 602
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
790-1059 |
1.76e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 49.44 E-value: 1.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 790 EIQKLSEQLQAAEKQIQNLEtEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAM 869
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQ-AELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARAL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 870 QvmetklkereereqqlteaKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQlELTKANEKAVQLQKNVEQT 949
Cdd:COG3883 96 Y-------------------RSGGSVSYLDVLLGSESFSDFLDRLSALSKIADADADLLE-ELKADKAELEAKKAELEAK 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 950 AQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQ 1029
Cdd:COG3883 156 LAELEALKAE-LEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAA 234
|
250 260 270
....*....|....*....|....*....|
gi 2024359618 1030 KKNDELETQAEELKKQAEQAKSLSSVLASA 1059
Cdd:COG3883 235 AAAAAAAAAASAAGAGAAGAAGAAAGSAGA 264
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
1439-2118 |
1.78e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 50.36 E-value: 1.78e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1439 SLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELKKKNLENQE 1518
Cdd:pfam02463 165 SRLKRKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQE 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1519 LIACRSDLSDLLKEAQDAR----RTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLT 1594
Cdd:pfam02463 245 LLRDEQEEIESSKQEIEKEeeklAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKK 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1595 VEKKARILDKESFLlermelqnnigFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKI 1674
Cdd:pfam02463 325 KAEKELKKEKEEIE-----------ELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLK 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1675 EQLKSDFtSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEwkslviiNEEILKEKEKLSKEYYKL 1754
Cdd:pfam02463 394 EEELELK-SEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLT-------EEKEELEKQELKLLKDEL 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1755 HEKVVALLEQTDADFSCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQ 1834
Cdd:pfam02463 466 ELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAI 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1835 EKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNL-ENKKVEELKKEFEALKLAAAQKSQQLAALQEEN 1913
Cdd:pfam02463 546 STAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLkSIAVLEIDPILNLAQLDKATLEADEDDKRAKVV 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1914 VKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKL 1993
Cdd:pfam02463 626 EGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKE 705
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1994 RNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSGDIAANLLQDESAEDKQQEIDFLN 2073
Cdd:pfam02463 706 QREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEK 785
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 2024359618 2074 SVIVDLQRRNEELNLKIQRMCEAALNGNEEETINYDSEEEGLSKK 2118
Cdd:pfam02463 786 LKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKI 830
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1667-2016 |
1.81e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.07 E-value: 1.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1667 TEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQH------KYEVTEKEKMELvqENESLHAEWKSLVIINEEI 1740
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRRerekaeRYQALLKEKREY--EGYELLKEKEALERQKEAI 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1741 LKEKEKLSKEYYKLHEKVVALLEQTDAdfscrllvsegkHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRA----- 1815
Cdd:TIGR02169 243 ERQLASLEEELEKLTEEISELEKRLEE------------IEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASlersi 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1816 EEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKqnnlkneEELTKSKELLNLENKKVEELKKEFEAL 1895
Cdd:TIGR02169 311 AEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLT-------EEYAELKEELEDLRAELEEVDKEFAET 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1896 KLAAAQKSQQLAALQEENVKLAEELGRSRDEVtshQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDE---ERASL 1972
Cdd:TIGR02169 384 RDELKDYREKLEKLKREINELKRELDRLQEEL---QRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKqewKLEQL 460
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2024359618 1973 QKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKT 2016
Cdd:TIGR02169 461 AADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEE 504
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
892-1367 |
2.04e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.77 E-value: 2.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 892 KLENDIAEIMKSSG-------DSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQ-SQQETLKT 963
Cdd:COG4717 50 RLEKEADELFKPQGrkpelnlKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKlEKLLQLLP 129
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 964 HQEELKKMQDQLTDMKKQMETSQNQ---YKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAE 1040
Cdd:COG4717 130 LYQELEALEAELAELPERLEELEERleeLRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLA 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1041 ELKKQAEQAKslsSVLASARKEIELMSDKMRDLiSEKETLAQERNTLKLekESLLSQHLEMESKILLVQQDREELWTKNE 1120
Cdd:COG4717 210 ELEEELEEAQ---EELEELEEELEQLENELEAA-ALEERLKEARLLLLI--AAALLALLGLGGSLLSLILTIAGVLFLVL 283
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1121 ELNSenkkILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSEstLLQQLKELQANKDAVD 1200
Cdd:COG4717 284 GLLA----LLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLE--LLDRIEELQELLREAE 357
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1201 vACQKHIKEREELEHYQKLLEENDrvIKDKDDVIQRLQssYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHiALK 1280
Cdd:COG4717 358 -ELEEELQLEELEQEIAALLAEAG--VEDEEELRAALE--QAEEYQELKEELEELEEQLEELLGELEELLEALDEE-ELE 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1281 NEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQAlklrkDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFL 1360
Cdd:COG4717 432 EELEELEEELEELEEELEELREELAELEAELEQLEEDGEL-----AELLQELEELKAELRELAEEWAALKLALELLEEAR 506
|
....*..
gi 2024359618 1361 EEMKSSR 1367
Cdd:COG4717 507 EEYREER 513
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
492-1087 |
2.06e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 49.90 E-value: 2.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 492 ADKLQRELEDTRvatvSEKSRIMELERDLALRVKEVAELrgrlesSKHIDDVDTSLS-LLQEISSLQEKMAAAGKEHQ-- 568
Cdd:PRK01156 168 YDKLKDVIDMLR----AEISNIDYLEEKLKSSNLELENI------KKQIADDEKSHSiTLKEIERLSIEYNNAMDDYNnl 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 569 ----REMSSLKEKFESSEEALRKEIKTLSASNERMGK----ENESLKTKLDHANKENSDVIELWKSKleSAIASHQQAME 640
Cdd:PRK01156 238 ksalNELSSLEDMKNRYESEIKTAESDLSMELEKNNYykelEERHMKIINDPVYKNRNYINDYFKYK--NDIENKKQILS 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 641 ELKVSFNK--GVGAQTAEFAELKTQMEKVKLDYE---NEMSNLKLKQENEKSqHLKEIEALKAKLlevtEEKEQTLENLK 715
Cdd:PRK01156 316 NIDAEINKyhAIIKKLSVLQKDYNDYIKKKSRYDdlnNQILELEGYEMDYNS-YLKSIESLKKKI----EEYSKNIERMS 390
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 716 AKLESVEDQHLVEmedtlnklqeAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKlldlaalqkansegKLEIQKLS 795
Cdd:PRK01156 391 AFISEILKIQEID----------PDAIKKELNEINVKLQDISSKVSSLNQRIRALREN--------------LDELSRNM 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 796 EQLQAAEKQI---QNLETEKVSNLTK----ELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKftsAVDGAENAQRA 868
Cdd:PRK01156 447 EMLNGQSVCPvcgTTLGEEKSNHIINhyneKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYLESE---EINKSINEYNK 523
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 869 MQVMETKLKEREEREQQLTEAKVKLENDIAEImkSSGDSSAQLMKMNDELR-LKERQLEQIQLELTKANEKAVQLqKNVE 947
Cdd:PRK01156 524 IESARADLEDIKIKINELKDKHDKYEEIKNRY--KSLKLEDLDSKRTSWLNaLAVISLIDIETNRSRSNEIKKQL-NDLE 600
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 948 QTAQKAEQSQQETLKTHQEELKKMQDQLT----------DMKKQMETSQNQYKDlqakYEKETSEMITKHDaDIKGFKQN 1017
Cdd:PRK01156 601 SRLQEIEIGFPDDKSYIDKSIREIENEANnlnnkyneiqENKILIEKLRGKIDN----YKKQIAEIDSIIP-DLKEITSR 675
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1018 LLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTL 1087
Cdd:PRK01156 676 INDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINETLESMKKIKKAIGDLKRLREAF 745
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1963-2093 |
2.51e-05 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 49.47 E-value: 2.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1963 KEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASaktlqsvvktLESDKLKLEEKVKNLEQKLK-AKSEQ 2041
Cdd:COG2433 388 KELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEE----------LEAELEEKDERIERLERELSeARSEE 457
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 2024359618 2042 PltvtspsgdiaANLLQDESAEDKQQEIDFLNSVIVDLQRRNEELNLKIQRM 2093
Cdd:COG2433 458 R-----------REIRKDREISRLDREIERLERELEEERERIEELKRKLERL 498
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
671-1100 |
3.61e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.00 E-value: 3.61e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 671 YENEMSNLKLKQENEKSQHLKEIEALKAKLLEVtEEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQEAEIKVKELDVLQ 750
Cdd:COG4717 51 LEKEADELFKPQGRKPELNLKELKELEEELKEA-EEKEEEYAELQEELEELEEE-LEELEAELEELREELEKLEKLLQLL 128
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 751 AKCNEQTKL---IGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQKL 827
Cdd:COG4717 129 PLYQELEALeaeLAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRL 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 828 LDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQR--------AMQVMETKLKEREEREQQLTEA---------- 889
Cdd:COG4717 209 AELEEELEEAQEELEELEEELEQLENELEAAALEERLKEArlllliaaALLALLGLGGSLLSLILTIAGVlflvlgllal 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 890 --------KVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETL 961
Cdd:COG4717 289 lflllareKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEEL 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 962 KTHQEELKKMQD--------QLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDA-DIKGFKQNLLDAEEALKAAQKKN 1032
Cdd:COG4717 369 EQEIAALLAEAGvedeeelrAALEQAEEYQELKEELEELEEQLEELLGELEELLEAlDEEELEEELEELEEELEELEEEL 448
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359618 1033 DELETQAEELKKQAEQAKSlSSVLASARKEIElmsdkmrDLISEKETLAQERNTLKLEKEsLLSQHLE 1100
Cdd:COG4717 449 EELREELAELEAELEQLEE-DGELAELLQELE-------ELKAELRELAEEWAALKLALE-LLEEARE 507
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1527-2041 |
4.14e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 48.95 E-value: 4.14e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1527 SDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKEN---LTVEKKARILD 1603
Cdd:pfam05483 281 DENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAhsfVVTEFEATTCS 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1604 KESFL-LERMELQNNIGFLEKEVEEMREKNKEfLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFT 1682
Cdd:pfam05483 361 LEELLrTEQQRLEKNEDQLKIITMELQKKSSE-LEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQ 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1683 SLS----VSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQE---NESLHAEWKSLVIINEEILKEKEKLSKEYYKLH 1755
Cdd:pfam05483 440 ELIfllqAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEklkNIELTAHCDKLLLENKELTQEASDMTLELKKHQ 519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1756 EKVVALLEQTDAdfscrllvsegkhellleemsnlalKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDaihqe 1835
Cdd:pfam05483 520 EDIINCKKQEER-------------------------MLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLD----- 569
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1836 KIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELtkskellnlENKKVEELKKEFEALKLAAAQKSQQLAALQEENVK 1915
Cdd:pfam05483 570 KSEENARSIEYEVLKKEKQMKILENKCNNLKKQIEN---------KNKNIEELHQENKALKKKGSAENKQLNAYEIKVNK 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1916 LAEELGRSRDE----VTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEErasLQKSISDTSALITQKDEELE 1991
Cdd:pfam05483 641 LELELASAKQKfeeiIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKR---CQHKIAEMVALMEKHKHQYD 717
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 2024359618 1992 KLRNEITVLRGENASAKTLQSVVK-TLESDKLKLEEKVKNLEQKLKAKSEQ 2041
Cdd:pfam05483 718 KIIEERDSELGLYKNKEQEQSSAKaALEIELSNIKAELLSLKKQLEIEKEE 768
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1033-1605 |
4.41e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 48.74 E-value: 4.41e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1033 DELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDR 1112
Cdd:PRK01156 176 DMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYE 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1113 EELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVA---LISEKSKLLSEIEtaqaDLLKITQENDALRSSESTLLQQL 1189
Cdd:PRK01156 256 SEIKTAESDLSMELEKNNYYKELEERHMKIINDPVYKnrnYINDYFKYKNDIE----NKKQILSNIDAEINKYHAIIKKL 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1190 KELQANKDAVdvacQKHIKEREELEH-----------YQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSIL 1258
Cdd:PRK01156 332 SVLQKDYNDY----IKKKSRYDDLNNqilelegyemdYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAI 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1259 TAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLlkSREELCVSLANTANENQALKLRKD--EMQTELETER 1336
Cdd:PRK01156 408 KKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEML--NGQSVCPVCGTTLGEEKSNHIINHynEKKSRLEEKI 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1337 EKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEAL--FASEQRLLAER----EELVNENKAVTEKLTKA 1410
Cdd:PRK01156 486 REIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARADLedIKIKINELKDKhdkyEEIKNRYKSLKLEDLDS 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1411 TADAVLAETAFTEKINELNLEKesvfskslQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELdFSAKRL 1490
Cdd:PRK01156 566 KRTSWLNALAVISLIDIETNRS--------RSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANN-LNNKYN 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1491 LVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILN- 1569
Cdd:PRK01156 637 EIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSd 716
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 2024359618 1570 -----RERTELQDKCQKLTGEVENMKENLTVEKKARILDKE 1605
Cdd:PRK01156 717 rindiNETLESMKKIKKAIGDLKRLREAFDKSGVPAMIRKS 757
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
791-1145 |
4.63e-05 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 48.42 E-value: 4.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 791 IQKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQKLLDLEKnlsAVNQVKDSL-EKELQLLKEKFTSAVDGAENAQRAM 869
Cdd:COG5185 248 LAQTSDKLEKLVEQNTDLRLEKLGENAESSKRLNENANNLIK---QFENTKEKIaEYTKSIDIKKATESLEEQLAAAEAE 324
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 870 QVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNdELRLKERQLEQIQLELTKANEKAVQLQKNVEQT 949
Cdd:COG5185 325 QELEESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEV-ELSKSSEELDSFKDTIESTKESLDEIPQNQRGY 403
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 950 AQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKgfkqnlldaeealKAAQ 1029
Cdd:COG5185 404 AQEILATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREADEESQSRLE-------------EAYD 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1030 KKNDELETQAEELKKQAEQAKS-LSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLV 1108
Cdd:COG5185 471 EINRSVRSKKEDLNEELTQIESrVSTLKATLEKLRAKLERQLEGVRSKLDQVAESLKDFMRARGYAHILALENLIPASEL 550
|
330 340 350
....*....|....*....|....*....|....*..
gi 2024359618 1109 QQDREELWTKNEELNSENKKILKQKEAAEAKSRQEST 1145
Cdd:COG5185 551 IQASNAKTDGQAANLRTAVIDELTQYLSTIESQQARE 587
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
872-1458 |
5.77e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 48.68 E-value: 5.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 872 METKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQ----IQLELTKANEKAVQLQKNVE 947
Cdd:pfam12128 246 LQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEkrdeLNGELSAADAAVAKDRSELE 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 948 QTAQKAEQSQQ---ETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDA-EE 1023
Cdd:pfam12128 326 ALEDQHGAFLDadiETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIrEA 405
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1024 ALKAAQKKNDELETQAEELKKQAEQAKSLSSV----LASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHL 1099
Cdd:pfam12128 406 RDRQLAVAEDDLQALESELREQLEAGKLEFNEeeyrLKSRLGELKLRLNQATATPELLLQLENFDERIERAREEQEAANA 485
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1100 EMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALIS-----------EKSKLLSEIETAQADL 1168
Cdd:pfam12128 486 EVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHflrkeapdweqSIGKVISPELLHRTDL 565
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1169 lkITQENDALRSSESTLL------------------QQLK-ELQANKDAVDVACQKHIKEREELEHYQKLLEENDRvikD 1229
Cdd:pfam12128 566 --DPEVWDGSVGGELNLYgvkldlkridvpewaaseEELReRLDKAEEALQSAREKQAAAEEQLVQANGELEKASR---E 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1230 KDDVIQRLQSSYDDLAR----NQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEM-----L 1300
Cdd:pfam12128 641 ETFARTALKNARLDLRRlfdeKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTekqayW 720
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1301 LKSREELCVSLA----NTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIh 1376
Cdd:pfam12128 721 QVVEGALDAQLAllkaAIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQEVLRYFD- 799
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1377 LLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAvlaetafteKINELNLEKESVFSKSLQFEKhNEALLREKDEL 1456
Cdd:pfam12128 800 WYQETWLQRRPRLATQLSNIERAISELQQQLARLIADT---------KLRRAKLEMERKASEKQQVRL-SENLRGLRCEM 869
|
..
gi 2024359618 1457 ER 1458
Cdd:pfam12128 870 SK 871
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
830-1534 |
6.65e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 48.18 E-value: 6.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 830 LEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVME---TKLKEREEREQQLTEAKVKLENDIAEIMKSSGD 906
Cdd:pfam05483 83 LYKEAEKIKKWKVSIEAELKQKENKLQENRKIIEAQRKAIQELQfenEKVSLKLEEEIQENKDLIKENNATRHLCNLLKE 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 907 SSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLqknVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQ 986
Cdd:pfam05483 163 TCARSAEKTKKYEYEREETRQVYMDLNNNIEKMILA---FEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINDKE 239
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 987 NQYKDLQAKYEKETSEMitkhdadikgfKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELM 1066
Cdd:pfam05483 240 KQVSLLLIQITEKENKM-----------KDLTFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRS 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1067 SDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTE 1146
Cdd:pfam05483 309 MSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQK 388
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1147 KVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELE-----------H 1215
Cdd:pfam05483 389 KSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEiqltaiktseeH 468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1216 YQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQS 1295
Cdd:pfam05483 469 YLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRD 548
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1296 E----KEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASN 1371
Cdd:pfam05483 549 ElesvREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAEN 628
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1372 SE------KIHLLQEALFASEQRLlaerEELVNENKAVTEkLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKH 1445
Cdd:pfam05483 629 KQlnayeiKVNKLELELASAKQKF----EEIIDNYQKEIE-DKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIA 703
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1446 NEALLREKDelERKYSELLDEKKSLENAFSDMKREQEldfSAKRLLVQENTTLKYSIEALEEELKKKNLENQELIACRSD 1525
Cdd:pfam05483 704 EMVALMEKH--KHQYDKIIEERDSELGLYKNKEQEQS---SAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKE 778
|
....*....
gi 2024359618 1526 LSDLLKEAQ 1534
Cdd:pfam05483 779 NTAILKDKK 787
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
565-721 |
8.57e-05 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 47.71 E-value: 8.57e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 565 KEHQREMSSLKEKFE---SSEEALRKEIKTLSASNERM---GKENESLKTKLDHANKENSDVIELWK------SKLESAI 632
Cdd:pfam05667 331 QQREEELEELQEQLEdleSSIQELEKEIKKLESSIKQVeeeLEELKEQNEELEKQYKVKKKTLDLLPdaeeniAKLQALV 410
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 633 ASHQQAMEELKVSFNKGVGAQTAEFAELKTQmekvkldyenemsnlKLKQENEKSQHLKEIEALKAKLLEVTEE---KEQ 709
Cdd:pfam05667 411 DASAQRLVELAGQWEKHRVPLIEEYRALKEA---------------KSNKEDESQRKLEEIKELREKIKEVAEEakqKEE 475
|
170
....*....|..
gi 2024359618 710 TLENLKAKLESV 721
Cdd:pfam05667 476 LYKQLVAEYERL 487
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1028-1886 |
8.59e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.21 E-value: 8.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1028 AQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKIll 1107
Cdd:PTZ00121 1083 AKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKA-- 1160
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1108 vqqdreelwtkneelnSENKKILKQKEAAEAKSRQESTEkvaliSEKSKLLSEIETAQadllKITQENDALRSSESTLLQ 1187
Cdd:PTZ00121 1161 ----------------EDARKAEEARKAEDAKKAEAARK-----AEEVRKAEELRKAE----DARKAEAARKAEEERKAE 1215
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1188 QLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQE 1267
Cdd:PTZ00121 1216 EARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEA 1295
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1268 KDLDLKSTHIALKNEIDCLLQTNRsLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNM 1347
Cdd:PTZ00121 1296 KKAEEKKKADEAKKKAEEAKKADE-AKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKE 1374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1348 DLKASLSSLSNFLEEMKSSREASN--SEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAftEKI 1425
Cdd:PTZ00121 1375 EAKKKADAAKKKAEEKKKADEAKKkaEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEA--KKK 1452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1426 NELNLEKESVFSKSLQFEKHNEAllREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEAL 1505
Cdd:PTZ00121 1453 AEEAKKAEEAKKKAEEAKKADEA--KKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKA 1530
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1506 EEELKKKNLENQEliacRSDLSDLLKEAQDARRTLENELAavsHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGE 1585
Cdd:PTZ00121 1531 EEAKKADEAKKAE----EKKKADELKKAEELKKAEEKKKA---EEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEE 1603
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1586 VENMK-ENLTVEKKARIldKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILY 1664
Cdd:PTZ00121 1604 EKKMKaEEAKKAEEAKI--KAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAK 1681
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1665 KETEQLASKIEQLKSDFTSL----SVSKAELEDVHSCVSVMLDELQHKYEVTE--KEKMELVQENESLHAEWKSLVIInE 1738
Cdd:PTZ00121 1682 KAEEDEKKAAEALKKEAEEAkkaeELKKKEAEEKKKAEELKKAEEENKIKAEEakKEAEEDKKKAEEAKKDEEEKKKI-A 1760
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1739 EILKEKEKLSKEYYKLHEKVVAllEQTDADFSCRLLVSEGKHElllEEMSNLALKLREIERLQAQTFMQKFEADKRAEEV 1818
Cdd:PTZ00121 1761 HLKKEEEKKAEEIRKEKEAVIE--EELDEEDEKRRMEVDKKIK---DIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEV 1835
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359618 1819 LQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQnnlkNEEELTKSKELLNLENKKVE 1886
Cdd:PTZ00121 1836 ADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKED----DEEEIEEADEIEKIDKDDIE 1899
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
1020-1380 |
8.92e-05 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 47.58 E-value: 8.92e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1020 DAEEALKAAQKKNDELETQAEELKKQAEQAKSlssVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHL 1099
Cdd:pfam07888 56 QREKEKERYKRDREQWERQRRELESRVAELKE---ELRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAAHEARIR 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1100 EMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALR 1179
Cdd:pfam07888 133 ELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQ 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1180 SSESTLLQQLKELQANKDAVDVACqkhikerEELEHYQKLLEENDRVIKDKDDVIQRLQSSYDdlaRNQRELLQevsilt 1259
Cdd:pfam07888 213 DTITTLTQKLTTAHRKEAENEALL-------EELRSLQERLNASERKVEGLGEELSSMAAQRD---RTQAELHQ------ 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1260 aERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQS----EKEMLLKSREELcvslantanenqalkLRKDEMQTELETE 1335
Cdd:pfam07888 277 -ARLQAAQLTLQLADASLALREGRARWAQERETLQQsaeaDKDRIEKLSAEL---------------QRLEERLQEERME 340
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 2024359618 1336 REKLE-KMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQE 1380
Cdd:pfam07888 341 REKLEvELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAE 386
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1810-2008 |
1.00e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 1.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1810 EADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELK 1889
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQK 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1890 KEFEALkLAAAQKSQQ----------------------LAALQEENVKLAEELGRSRDEVTS-HQKLEEERSVLNNQLLE 1946
Cdd:COG4942 104 EELAEL-LRALYRLGRqpplalllspedfldavrrlqyLKYLAPARREQAEELRADLAELAAlRAELEAERAELEALLAE 182
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024359618 1947 MKKSLpsntLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAK 2008
Cdd:COG4942 183 LEEER----AALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
691-891 |
1.02e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 47.70 E-value: 1.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 691 KEIEALKAKLlevtEEKEQTLENLKAK-----LESVEDQHLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKL------ 759
Cdd:COG3206 182 EQLPELRKEL----EEAEAALEEFRQKnglvdLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSgpdalp 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 760 -------IGSLTQQIRASEEKLLDLAALQKANSEgklEIQKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQKLLDLEK 832
Cdd:COG3206 258 ellqspvIQQLRAQLAELEAELAELSARYTPNHP---DVIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQA 334
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024359618 833 NLSAVNQVKDSL---EKELQLLKEKftsavdgAENAQRAMQVMETKLKE-REEREQQLTEAKV 891
Cdd:COG3206 335 QLAQLEARLAELpelEAELRRLERE-------VEVARELYESLLQRLEEaRLAEALTVGNVRV 390
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
873-1064 |
1.14e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 46.75 E-value: 1.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 873 ETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQK 952
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 953 AEQSQQ--------------ETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMitkhdadikgfKQNL 1018
Cdd:COG3883 95 LYRSGGsvsyldvllgsesfSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAEL-----------EALK 163
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 2024359618 1019 LDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIE 1064
Cdd:COG3883 164 AELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAE 209
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
479-903 |
1.17e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.45 E-value: 1.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 479 KELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALR--VKEVAELRGRLESSkhIDDVDTSLSLLQEISSL 556
Cdd:COG4717 84 EEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLplYQELEALEAELAEL--PERLEELEERLEELREL 161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 557 QEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVielwKSKLESAIASHQ 636
Cdd:COG4717 162 EEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEEL----EEELEQLENELE 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 637 QAMEELKVSFNKGVGAQTAEFAELKTQMEKVKLDYENE----------MSNLKLKQENEKSQHLKEIEALKAkLLEVTEE 706
Cdd:COG4717 238 AAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIagvlflvlglLALLFLLLAREKASLGKEAEELQA-LPALEEL 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 707 KEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKELDVL--QAKCNEQTKLIGSLTQQIRA-SEEKLLDLAALQKA 783
Cdd:COG4717 317 EEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELeeELQLEELEQEIAALLAEAGVeDEEELRAALEQAEE 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 784 NSEGKLEIQKLSEQLQAAEKQIQN-LETEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKftsavDGA 862
Cdd:COG4717 397 YQELKEELEELEEQLEELLGELEElLEALDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEED-----GEL 471
|
410 420 430 440
....*....|....*....|....*....|....*....|.
gi 2024359618 863 ENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKS 903
Cdd:COG4717 472 AELLQELEELKAELRELAEEWAALKLALELLEEAREEYREE 512
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1502-2038 |
1.45e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 47.20 E-value: 1.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1502 IEALEEELKKKNLE----NQELIACRSDLSDLLKEAQDarrtLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQD 1577
Cdd:PRK01156 185 IDYLEEKLKSSNLEleniKKQIADDEKSHSITLKEIER----LSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKT 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1578 KCQKLTGEVENMKENLTVEKkarildkesfllERMELQNNigflekEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVI 1657
Cdd:PRK01156 261 AESDLSMELEKNNYYKELEE------------RHMKIIND------PVYKNRNYINDYFKYKNDIENKKQILSNIDAEIN 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1658 KEKMILYK--ETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVI 1735
Cdd:PRK01156 323 KYHAIIKKlsVLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEI 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1736 INEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSCRLLVSEGKHEL------------LLEEMSNLALKL--REIERLQ 1801
Cdd:PRK01156 403 DPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLngqsvcpvcgttLGEEKSNHIINHynEKKSRLE 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1802 AQTFMQKFEADKRAEEVLQtmekVTKEKDAIHQEKIETLAS----LENSRQTNEKLQNELDMLKQNNLKNEE--ELTKSK 1875
Cdd:PRK01156 483 EKIREIEIEVKDIDEKIVD----LKKRKEYLESEEINKSINeynkIESARADLEDIKIKINELKDKHDKYEEikNRYKSL 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1876 ELLNLENKKVEELKK-------EFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSH-QKLEEERSVLNNQLLEM 1947
Cdd:PRK01156 559 KLEDLDSKRTSWLNAlavisliDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSiREIENEANNLNNKYNEI 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1948 K-KSLPSNTLREST--LKKEIdEERASLQKSISDTSALITQKDEELEKLRNEitvLRGENASAKTLQSVVKTLESDKLKL 2024
Cdd:PRK01156 639 QeNKILIEKLRGKIdnYKKQI-AEIDSIIPDLKEITSRINDIEDNLKKSRKA---LDDAKANRARLESTIEILRTRINEL 714
|
570
....*....|....
gi 2024359618 2025 EEKVKNLEQKLKAK 2038
Cdd:PRK01156 715 SDRINDINETLESM 728
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1108-1538 |
1.68e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.68 E-value: 1.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1108 VQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSES--TL 1185
Cdd:COG4717 51 LEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQllPL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1186 LQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQ-RELLQEVSILTAERDS 1264
Cdd:COG4717 131 YQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEElQDLAEELEELQQRLAE 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1265 AQEKDLDLKSTHIALKNEIDCLLQTNRSLQ-----SEKEMLLKSREELCV--------------------------SLAN 1313
Cdd:COG4717 211 LEEELEEAQEELEELEEELEQLENELEAAAleerlKEARLLLLIAAALLAllglggsllsliltiagvlflvlgllALLF 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1314 TANENQALKLRKDEMQTELETEREKLEK------MTKDNMDLKASLSSLSNFLEEMKSSREAsNSEKIHLLQEALfasEQ 1387
Cdd:COG4717 291 LLLAREKASLGKEAEELQALPALEELEEeeleelLAALGLPPDLSPEELLELLDRIEELQEL-LREAEELEEELQ---LE 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1388 RLLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQF-EKHNEALLREK--------DELER 1458
Cdd:COG4717 367 ELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELlEALDEEELEEEleeleeelEELEE 446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1459 KYSELLDEKKSLENAFSDMKREQELDfsakrllvqentTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARR 1538
Cdd:COG4717 447 ELEELREELAELEAELEQLEEDGELA------------ELLQELEELKAELRELAEEWAALKLALELLEEAREEYREERL 514
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1447-1997 |
1.75e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 46.85 E-value: 1.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1447 EALLREKDELERKYSELLDEKKSLENAFSDMKRE-QELDFSAKRLLVQENTTLKySIEALEEELKKKNLENQELIACRSD 1525
Cdd:COG1196 242 EELEAELEELEAELEELEAELAELEAELEELRLElEELELELEEAQAEEYELLA-ELARLEQDIARLEERRRELEERLEE 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1526 LSDLLKEAQDARRTLENELAAVShakqvlsssfntcssdiEILNRERTELQDKCQKLTgEVENMKENLTVEKKARILDKE 1605
Cdd:COG1196 321 LEEELAELEEELEELEEELEELE-----------------EELEEAEEELEEAEAELA-EAEEALLEAEAELAEAEEELE 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1606 SFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLS 1685
Cdd:COG1196 383 ELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALL 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1686 VSKAELEDVHSCVSVMLDELQHKYEvtEKEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLH--EKVVALLE 1763
Cdd:COG1196 463 ELLAELLEEAALLEAALAELLEELA--EAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIgvEAAYEAAL 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1764 QTDADFSCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETL--A 1841
Cdd:COG1196 541 EAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVlgD 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1842 SLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELG 1921
Cdd:COG1196 621 TLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALL 700
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359618 1922 RSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEI 1997
Cdd:COG1196 701 AEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
652-1139 |
1.93e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.83 E-value: 1.93e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 652 AQTAEFAELKTQMEKvkLDYENEMSNLKLKQE--NEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLvem 729
Cdd:COG4913 259 ELAERYAAARERLAE--LEYLRAALRLWFAQRrlELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIR--- 333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 730 EDTLNKLQEAEikvKELDVLQAKCNEQTKLIGSLTQQIRASEEKL-LDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNL 808
Cdd:COG4913 334 GNGGDRLEQLE---REIERLERELEERERRRARLEALLAALGLPLpASAEEFAALRAEAAALLEALEEELEALEEALAEA 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 809 ETEKvSNLTKELQGKEQKLLDLEKNLS----AVNQVKDSLEKELQLLK----------------EKFTSAVDGA------ 862
Cdd:COG4913 411 EAAL-RDLRRELRELEAEIASLERRKSnipaRLLALRDALAEALGLDEaelpfvgelievrpeeERWRGAIERVlggfal 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 863 ------ENAQRAMQVME-TKLKEReereqqLTEAKVKLENDIAEIMKSSGDSSAQLMK---------MNDELRLK----- 921
Cdd:COG4913 490 tllvppEHYAAALRWVNrLHLRGR------LVYERVRTGLPDPERPRLDPDSLAGKLDfkphpfrawLEAELGRRfdyvc 563
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 922 ---ERQLEQ----IQLE-LTKANEKAVQLQKnveQTAQKAE----QSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQY 989
Cdd:COG4913 564 vdsPEELRRhpraITRAgQVKGNGTRHEKDD---RRRIRSRyvlgFDNRAKLAALEAELAELEEELAEAEERLEALEAEL 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 990 KDLQAKyeKETSEMITKH---DADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELM 1066
Cdd:COG4913 641 DALQER--REALQRLAEYswdEIDVASAEREIAELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRL 718
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024359618 1067 SDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWtknEELNSENKKILKQKEAAEAK 1139
Cdd:COG4913 719 EKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELR---ENLEERIDALRARLNRAEEE 788
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
967-1202 |
1.95e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 45.98 E-value: 1.95e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 967 ELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEmitkhdadikgfkqnLLDAEEALKAAQKKNDELETQAEELKKQA 1046
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEE---------------YNELQAELEALQAEIDKLQAEIAEAEAEI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1047 EQAKS-LSSVLASARK--------EIELMSDKMRDLISEKETLAQerntlklekesllsqhlemeskilLVQQDREELwt 1117
Cdd:COG3883 82 EERREeLGERARALYRsggsvsylDVLLGSESFSDFLDRLSALSK------------------------IADADADLL-- 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1118 knEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKD 1197
Cdd:COG3883 136 --EELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAA 213
|
....*
gi 2024359618 1198 AVDVA 1202
Cdd:COG3883 214 AAAAA 218
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1831-2041 |
1.96e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.30 E-value: 1.96e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1831 AIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQ 1910
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1911 EENVKLAEELGRSRDEVTSHQKLEEERSVLNNQllemkksLPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEEL 1990
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPPLALLLSPE-------DFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAEL 169
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2024359618 1991 EKLRNEITVLRGENASAKtlqsvvKTLESDKLKLEEKVKNLEQKLKAKSEQ 2041
Cdd:COG4942 170 EAERAELEALLAELEEER------AALEALKAERQKLLARLEKELAELAAE 214
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1120-1396 |
2.06e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 46.82 E-value: 2.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1120 EELNSENKKILKQKEAAEAKSRQESTEKVALI--SEKSKLLSEIETAQA--DLLKITQENDALRSSESTLLQQLKELQAN 1195
Cdd:PLN02939 106 EAIAAIDNEQQTNSKDGEQLSDFQLEDLVGMIqnAEKNILLLNQARLQAleDLEKILTEKEALQGKINILEMRLSETDAR 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1196 kdaVDVACQKHIKEREELEHYQKLLEEndrvikdkddVIQRLQSSYddlarnqrellQEVSILTAERDSAQEKDLDLKST 1275
Cdd:PLN02939 186 ---IKLAAQEKIHVEILEEQLEKLRNE----------LLIRGATEG-----------LCVHSLSKELDVLKEENMLLKDD 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1276 HIALKNEIDCLLQTNRS---LQSEKEMLLKSREEL-CVSLANTANENQALKLRKDEMQTELETEREKLEKMTK------- 1344
Cdd:PLN02939 242 IQFLKAELIEVAETEERvfkLEKERSLLDASLRELeSKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRATNqvekaal 321
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 2024359618 1345 ---DNMDLKASLSSLSNFLEEMKSSREASnsEKIHLLQEALFASEQRLLAEREEL 1396
Cdd:PLN02939 322 vldQNQDLRDKVDKLEASLKEANVSKFSS--YKVELLQQKLKLLEERLQASDHEI 374
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1790-1996 |
2.23e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.45 E-value: 2.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1790 LALKLREIERLQAQtfmqKFEADKRAEEVLQTMEKVTKEKDAIHQekietLASLENSRQTNEKLQNELdmlkqnnlkneE 1869
Cdd:COG4913 612 LAALEAELAELEEE----LAEAEERLEALEAELDALQERREALQR-----LAEYSWDEIDVASAEREI-----------A 671
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1870 ELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEmkk 1949
Cdd:COG4913 672 ELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELR--- 748
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2024359618 1950 SLPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNE 1996
Cdd:COG4913 749 ALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
783-1170 |
2.30e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 46.43 E-value: 2.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 783 ANSEGKLEIQKLSEQLQAAEKQIQNLET-EKVSNLtkELQGKEQKLLDLEKNLSAVNQVK-DSLEKELQLLKEKftsavd 860
Cdd:PLN02939 94 DDDHNRASMQRDEAIAAIDNEQQTNSKDgEQLSDF--QLEDLVGMIQNAEKNILLLNQARlQALEDLEKILTEK------ 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 861 gaENAQRAMQVMETKLKEREEREQQLTEAKVKLEndiaeimkssgdssaqlmkmndelrLKERQLEQIQLELTK--ANEK 938
Cdd:PLN02939 166 --EALQGKINILEMRLSETDARIKLAAQEKIHVE-------------------------ILEEQLEKLRNELLIrgATEG 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 939 AVQLQKNVEQTAQKAEQSqqeTLKTHQEELKKMQDQLTDMKKQMetsqnqykdlqAKYEKETSEMitkhDADIKGFKQNL 1018
Cdd:PLN02939 219 LCVHSLSKELDVLKEENM---LLKDDIQFLKAELIEVAETEERV-----------FKLEKERSLL----DASLRELESKF 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1019 LDAEEAL--------KAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRD-----LISEKETLAQERn 1085
Cdd:PLN02939 281 IVAQEDVsklsplqyDCWWEKVENLQDLLDRATNQVEKAALVLDQNQDLRDKVDKLEASLKEanvskFSSYKVELLQQK- 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1086 tLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSrqESTEKVALISEKSKLLSEIETAQ 1165
Cdd:PLN02939 360 -LKLLEERLQASDHEIHSYIQLYQESIKEFQDTLSKLKEESKKRSLEHPADDMPS--EFWSRILLLIDGWLLEKKISNND 436
|
....*
gi 2024359618 1166 ADLLK 1170
Cdd:PLN02939 437 AKLLR 441
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1558-2091 |
2.42e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 46.17 E-value: 2.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1558 FNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTVEKKARILDKESFLLERMELQNnigfLEKEVEEMREKNKEFLT 1637
Cdd:TIGR04523 70 INNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNK----LEKQKKENKKNIDKFLT 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1638 EKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHScvsvMLDELQHKYEVTEKEKM 1717
Cdd:TIGR04523 146 EIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLS----NLKKKIQKNKSLESQIS 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1718 ELVQENESLHAEWKSLviiNEEILKEKEKLSKEYYKL------HEKVVALLEQTDADfscrLLVSEGKHELLLEEMSNLA 1791
Cdd:TIGR04523 222 ELKKQNNQLKDNIEKK---QQEINEKTTEISNTQTQLnqlkdeQNKIKKQLSEKQKE----LEQNNKKIKELEKQLNQLK 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1792 LKLREIERLQAQTFMQKF--EADKRAEEVLQTMEKVTKEKDAIHQ--EKIETL-ASLENSRQTNEKLQNELDMlKQNNLK 1866
Cdd:TIGR04523 295 SEISDLNNQKEQDWNKELksELKNQEKKLEEIQNQISQNNKIISQlnEQISQLkKELTNSESENSEKQRELEE-KQNEIE 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1867 --NEEELTKSKELLNLENKKvEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQK----LEEERSVL 1940
Cdd:TIGR04523 374 klKKENQSYKQEIKNLESQI-NDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSeikdLTNQDSVK 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1941 NNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKsisdTSALITQKDEELEKLRNEITVLRGEnasaktlqsvVKTLESD 2020
Cdd:TIGR04523 453 ELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQ----KQKELKSKEKELKKLNEEKKELEEK----------VKDLTKK 518
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024359618 2021 KLKLEEKVKNLEQKLKAKSEQPLTVTSPSGDIAANLLQD---ESAEDKQQEIDFLNSVIVDLQRRNEELNLKIQ 2091
Cdd:TIGR04523 519 ISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKEnleKEIDEKNKEIEELKQTQKSLKKKQEEKQELID 592
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1427-1858 |
3.24e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 45.94 E-value: 3.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1427 ELNLEKESVFSKSLQFEK-HNEALLREKDE----LERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYS 1501
Cdd:pfam01576 109 EEQLDEEEAARQKLQLEKvTTEAKIKKLEEdillLEDQNSKLSKERKLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAM 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1502 IEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQK 1581
Cdd:pfam01576 189 ISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRE 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1582 LTGEVENMKENLTVEKKARILDK-------ESFLLERMELQNNIGFL----------EKEVEEMREKNKEFLTEKELLVQ 1644
Cdd:pfam01576 269 LEAQISELQEDLESERAARNKAEkqrrdlgEELEALKTELEDTLDTTaaqqelrskrEQEVTELKKALEEETRSHEAQLQ 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1645 EKEKSET--------KLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEK 1716
Cdd:pfam01576 349 EMRQKHTqaleelteQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQR 428
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1717 MELVQENESLHAEWKSLVIINEEILKEKEKLSKEY----YKLHEKVVALLEQTDA--DFSCRLLVSEGKHELLLEEMSNL 1790
Cdd:pfam01576 429 AELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVssleSQLQDTQELLQEETRQklNLSTRLRQLEDERNSLQEQLEEE 508
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024359618 1791 ALKLREIERLQAQTFMQKFEADKRAEEVLQTME-------KVTKEKDAIHQEKIETLASLENSRQTNEKLQNELD 1858
Cdd:pfam01576 509 EEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEaleegkkRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELD 583
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
692-834 |
3.42e-04 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 45.84 E-value: 3.42e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 692 EIEALKAKLLEVTEEKEQtlenLKAKLESVEDQHLVEMEDTLNKLQEaeikvkELDVLQAKCNEQTKLIGSLTQQIRASE 771
Cdd:COG0542 412 ELDELERRLEQLEIEKEA----LKKEQDEASFERLAELRDELAELEE------ELEALKARWEAEKELIEEIQELKEELE 481
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024359618 772 EKLLDLAALQKansegklEIQKLSEQLQAAEKQIQNLETEK-----VSNLT-----KELQGKEQKLLDLEKNL 834
Cdd:COG0542 482 QRYGKIPELEK-------ELAELEEELAELAPLLREEVTEEdiaevVSRWTgipvgKLLEGEREKLLNLEEEL 547
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
337-595 |
3.52e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.06 E-value: 3.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 337 LTETSSRYARKISGTTALQEALKEKQQHIEQLlAERDLERAEVAKATSHVGEIEQELALVRDGHDRhVLEMEAKMDQLRA 416
Cdd:COG4913 622 LEEELAEAEERLEALEAELDALQERREALQRL-AEYSWDEIDVASAEREIAELEAELERLDASSDD-LAALEEQLEELEA 699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 417 MVEAADREKVELLNQLEEEKRKVEDLQfrveeesitkGDLERKRQISEDPENTQTKLEHARIKELEQSLLFEKtKADKLQ 496
Cdd:COG4913 700 ELEELEEELDELKGEIGRLEKELEQAE----------EELDELQDRLEAAEDLARLELRALLEERFAAALGDA-VERELR 768
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 497 RELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRlESSKHIDDVDTSLSLLQEISS-----LQEKMAAAGKEH-QRE 570
Cdd:COG4913 769 ENLEERIDALRARLNRAEEELERAMRAFNREWPAETA-DLDADLESLPEYLALLDRLEEdglpeYEERFKELLNENsIEF 847
|
250 260
....*....|....*....|....*
gi 2024359618 571 MSSLKEKFESSEEALRKEIKTLSAS 595
Cdd:COG4913 848 VADLLSKLRRAIREIKERIDPLNDS 872
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1809-2044 |
3.98e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 45.66 E-value: 3.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1809 FEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKEllnlENKKVEEL 1888
Cdd:PLN02939 124 QLSDFQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQGKINILEMRLSETDARIKLAAQ----EKIHVEIL 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1889 KKEFEALKLAAAQK-----------SQQLAALQEENVKLAEELGRSRDEVTSHQ-------KLEEERSVLNNQLLEMKKS 1950
Cdd:PLN02939 200 EEQLEKLRNELLIRgateglcvhslSKELDVLKEENMLLKDDIQFLKAELIEVAeteervfKLEKERSLLDASLRELESK 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1951 L---PSNTLRESTLKKEIDEERA-SLQ------KSISDTSALITQKDEELEKLRNEItvlrgeNASAKtlQSVVKTLESD 2020
Cdd:PLN02939 280 FivaQEDVSKLSPLQYDCWWEKVeNLQdlldraTNQVEKAALVLDQNQDLRDKVDKL------EASLK--EANVSKFSSY 351
|
250 260
....*....|....*....|....*
gi 2024359618 2021 KLKL-EEKVKNLEQKLKAKSEQPLT 2044
Cdd:PLN02939 352 KVELlQQKLKLLEERLQASDHEIHS 376
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1784-2002 |
4.53e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.68 E-value: 4.53e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1784 LEEMSNLALKLRE-IERLQaqtfmqkfeadkRAEEVLQTMEKVTKEKDaiHQEKIETLASLENSRQTNEKLQNELDmlkq 1862
Cdd:COG4913 237 LERAHEALEDAREqIELLE------------PIRELAERYAAARERLA--ELEYLRAALRLWFAQRRLELLEAELE---- 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1863 nnlKNEEELTKSKELLNLENKKVEELKKEFEALKLA-AAQKSQQLAALQEENVKLAEELGRSRDEvtsHQKLEEERSVLN 1941
Cdd:COG4913 299 ---ELRAELARLEAELERLEARLDALREELDELEAQiRGNGGDRLEQLEREIERLERELEERERR---RARLEALLAALG 372
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024359618 1942 NQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRG 2002
Cdd:COG4913 373 LPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLER 433
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
788-923 |
4.79e-04 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 45.46 E-value: 4.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 788 KLEIQKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQKLLDLEKNLSAvnqvkdsLEKELQLLKEKFTSAVDGAENAQR 867
Cdd:COG0542 403 RMEIDSKPEELDELERRLEQLEIEKEALKKEQDEASFERLAELRDELAE-------LEEELEALKARWEAEKELIEEIQE 475
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024359618 868 AMQVMETKLKEREEREQQLTEAKVKL------------ENDIAEIM-KSSG--------DSSAQLMKMNDElrLKER 923
Cdd:COG0542 476 LKEELEQRYGKIPELEKELAELEEELaelapllreevtEEDIAEVVsRWTGipvgklleGEREKLLNLEEE--LHER 550
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
959-1203 |
5.45e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.29 E-value: 5.45e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 959 ETLKTHQEELKKMQDQLTDMKKQMETSQnQYKDLQAKYEKETSEmITKHDADIKGfkqnlLDAEEALKAAQKKNDELETQ 1038
Cdd:COG4913 228 DALVEHFDDLERAHEALEDAREQIELLE-PIRELAERYAAARER-LAELEYLRAA-----LRLWFAQRRLELLEAELEEL 300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1039 AEELKKQAEQAKSLSSVLASARKEIELMSDKMRDL-ISEKETLAQERNTLKLEKESLLSQHLEMESKI----LLVQQDRE 1113
Cdd:COG4913 301 RAELARLEAELERLEARLDALREELDELEAQIRGNgGDRLEQLEREIERLERELEERERRRARLEALLaalgLPLPASAE 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1114 ELWtkneelnsenkkilKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTL---LQQLK 1190
Cdd:COG4913 381 EFA--------------ALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIparLLALR 446
|
250
....*....|....*...
gi 2024359618 1191 -----ELQANKDAVDVAC 1203
Cdd:COG4913 447 dalaeALGLDEAELPFVG 464
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
2121-2138 |
5.65e-04 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 38.99 E-value: 5.65e-04
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
957-1223 |
5.66e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.01 E-value: 5.66e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 957 QQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEketsEMITKHDADIKGFKQNLLDAEEALKAAQKkndELE 1036
Cdd:PHA02562 179 LNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQ----NKYDELVEEAKTIKAEIEELTDELLNLVM---DIE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1037 TQAEELKKQAEQAKSLSSVLASARKEIELMSDK------MRDLISEKETLAQERNTLKlekesllsqhlEMESKILLVQQ 1110
Cdd:PHA02562 252 DPSAALNKLNTAAAKIKSKIEQFQKVIKMYEKGgvcptcTQQISEGPDRITKIKDKLK-----------ELQHSLEKLDT 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1111 DREELWTKNEELNSENKKILKQKeaaeAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQEndalrssestllqqLK 1190
Cdd:PHA02562 321 AIDELEEIMDEFNEQSKKLLELK----NKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEE--------------LA 382
|
250 260 270
....*....|....*....|....*....|...
gi 2024359618 1191 ELQANKDAVDVACQKHIKEREELEHYQKLLEEN 1223
Cdd:PHA02562 383 KLQDELDKIVKTKSELVKEKYHRGIVTDLLKDS 415
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
352-1050 |
6.21e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 45.17 E-value: 6.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 352 TALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRdGHDRHVLEMEAKMDQLRAMVEaadREKVELLNQ 431
Cdd:pfam01576 260 NNALKKIRELEAQISELQEDLESERAARNKAEKQRRDLGEELEALK-TELEDTLDTTAAQQELRSKRE---QEVTELKKA 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 432 LEEEKRK---------------VEDLQFRVEEESITKGDLERKRQISEdpenTQTKLEHARIKELEQSLLFEKTKADKLQ 496
Cdd:pfam01576 336 LEEETRSheaqlqemrqkhtqaLEELTEQLEQAKRNKANLEKAKQALE----SENAELQAELRTLQQAKQDSEHKRKKLE 411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 497 RELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLE--------SSKHIDDVDTSL----SLLQEISSLQEKMAAAG 564
Cdd:pfam01576 412 GQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNeaegknikLSKDVSSLESQLqdtqELLQEETRQKLNLSTRL 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 565 KEHQREMSSLKEKFESSEEALRKEIKTLSASNERMgkenESLKTKLDHANkENSDVIELWKSKLESAIASHQQAMEELKV 644
Cdd:pfam01576 492 RQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQL----SDMKKKLEEDA-GTLEALEEGKKRLQRELEALTQQLEEKAA 566
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 645 SFNKGVGAQTAEFAELKTQMekVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTE-------EKEQTLENLKAK 717
Cdd:pfam01576 567 AYDKLEKTKNRLQQELDDLL--VDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEERDraeaearEKETRALSLARA 644
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 718 LESVEDqHLVEMEDTlNKLQEAEIK--VKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLS 795
Cdd:pfam01576 645 LEEALE-AKEELERT-NKQLRAEMEdlVSSKDDVGKNVHELERSKRALEQQVEEMKTQLEELEDELQATEDAKLRLEVNM 722
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 796 EQLQAA-EKQIQNLE---TEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQV 871
Cdd:pfam01576 723 QALKAQfERDLQARDeqgEEKRRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQLKK 802
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 872 METKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTK-ANEKAVQLQKNVEQTA 950
Cdd:pfam01576 803 LQAQMKDLQRELEEARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDElADEIASGASGKSALQD 882
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 951 QK---------------AEQSQQETLKTHQEELKKMQDQLT-DMKKQMETSQN----------QYKDLQAKYEKETSEMI 1004
Cdd:pfam01576 883 EKrrleariaqleeeleEEQSNTELLNDRLRKSTLQVEQLTtELAAERSTSQKsesarqqlerQNKELKAKLQEMEGTVK 962
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1005 TKHDADIKGFKQNLLDAEEALKA--------------AQKKNDELETQAEELKKQAEQAK 1050
Cdd:pfam01576 963 SKFKSSIAALEAKIAQLEEQLEQesrerqaanklvrrTEKKLKEVLLQVEDERRHADQYK 1022
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
760-957 |
6.25e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.01 E-value: 6.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 760 IGSLTQQIRASEEKLLDLAA---LQKANSEGKLEIQKLSE---QLQAAEKQIQNLETeKVSNLTKELQGKEQKLLDLEKN 833
Cdd:COG3206 184 LPELRKELEEAEAALEEFRQkngLVDLSEEAKLLLQQLSElesQLAEARAELAEAEA-RLAALRAQLGSGPDALPELLQS 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 834 --LSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVMETKLKEREEREQQLTEAKVK-LENDIAEIMKSSGDSSAQ 910
Cdd:COG3206 263 pvIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRILASLEAELEaLQAREASLQAQLAQLEAR 342
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2024359618 911 LMKMNDelrlKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQ 957
Cdd:COG3206 343 LAELPE----LEAELRRLEREVEVARELYESLLQRLEEARLAEALTV 385
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
796-1271 |
6.85e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 6.85e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 796 EQLQAAEKQIQNLEtekvsnltkELQGKEQKLLDLEKNLSAVNQVKDSL-----EKELQLLKEKftsavdgAENAQRAMQ 870
Cdd:COG4913 242 EALEDAREQIELLE---------PIRELAERYAAARERLAELEYLRAALrlwfaQRRLELLEAE-------LEELRAELA 305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 871 VMETKLKEREEREQQLTEAKVKLENDIAEimkSSGDSSAQLMKmndELRLKERQLEQIQLELTKANEKAVQLQKNVEQTA 950
Cdd:COG4913 306 RLEAELERLEARLDALREELDELEAQIRG---NGGDRLEQLER---EIERLERELEERERRRARLEALLAALGLPLPASA 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 951 Q--KAEQSQ-QETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAkyeketsemitkhdaDIKGFKQN-------LLD 1020
Cdd:COG4913 380 EefAALRAEaAALLEALEEELEALEEALAEAEAALRDLRRELRELEA---------------EIASLERRksniparLLA 444
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1021 AEEALKAA-QKKNDELETQAEELKKQAEQAK--------------SL---SSVLASARKEIE-------LMSDKMRDLIS 1075
Cdd:COG4913 445 LRDALAEAlGLDEAELPFVGELIEVRPEEERwrgaiervlggfalTLlvpPEHYAAALRWVNrlhlrgrLVYERVRTGLP 524
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1076 EKETLAQERNTL--KLE-KESLLSQHLEME--SKILLVQQDREE--------------------LWTKNEE--------- 1121
Cdd:COG4913 525 DPERPRLDPDSLagKLDfKPHPFRAWLEAElgRRFDYVCVDSPEelrrhpraitragqvkgngtRHEKDDRrrirsryvl 604
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1122 -LNSENKKILKQKEAAEAKSR-QESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLL---QQLKELQANK 1196
Cdd:COG4913 605 gFDNRAKLAALEAELAELEEElAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREIAeleAELERLDASS 684
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024359618 1197 DAVDVAcqkhikeREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLD 1271
Cdd:COG4913 685 DDLAAL-------EEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLE 752
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
796-1134 |
8.13e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 44.73 E-value: 8.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 796 EQLQAAEKQIQNLETEKVSNLTKELQGKEQKLLDLEKNLSAvnqvkdsLEKELQLLKEKFTSAVDGAENAQRAMQVMETK 875
Cdd:pfam05557 19 KQMELEHKRARIELEKKASALKRQLDRESDRNQELQKRIRL-------LEKREAEAEEALREQAELNRLKKKYLEALNKK 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 876 LKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQ 955
Cdd:pfam05557 92 LNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQQSSLAEAEQR 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 956 SQQETLKTHQ-----EELKKMQDQLTDMKKqMETSQNQYKDLQAKYE--KETSEMITKHDADIKGFKQNLLDAEEALKAA 1028
Cdd:pfam05557 172 IKELEFEIQSqeqdsEIVKNSKSELARIPE-LEKELERLREHNKHLNenIENKLLLKEEVEDLKRKLEREEKYREEAATL 250
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1029 QKKNDELETQAEELKKQAeQAKSLSSVlasarkeielmsdKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLV 1108
Cdd:pfam05557 251 ELEKEKLEQELQSWVKLA-QDTGLNLR-------------SPEDLSRRIEQLQQREIVLKEENSSLTSSARQLEKARREL 316
|
330 340
....*....|....*....|....*.
gi 2024359618 1109 QQDREELWTKNEELNSENKKILKQKE 1134
Cdd:pfam05557 317 EQELAQYLKKIEDLNKKLKRHKALVR 342
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1567-1830 |
8.28e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 44.53 E-value: 8.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1567 ILNRERTELQDKCQKLtG--EVENMKENLTVEkkaRILDKESfllERMELQNNIGFLEKEVEemreknKEFLTEKELLVQ 1644
Cdd:PRK05771 13 TLKSYKDEVLEALHEL-GvvHIEDLKEELSNE---RLRKLRS---LLTKLSEALDKLRSYLP------KLNPLREEKKKV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1645 EKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHScVSVMLDELQHK-------YEVTEKEKM 1717
Cdd:PRK05771 80 SVKSLEELIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIERLEPWGN-FDLDLSLLLGFkyvsvfvGTVPEDKLE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1718 ELVQENESLHAEWKS-------LVIINEeilkekeklsKEYYKLHEKVVAlleqtDADFScRLLVSEGKH--ELLLEEMS 1788
Cdd:PRK05771 159 ELKLESDVENVEYIStdkgyvyVVVVVL----------KELSDEVEEELK-----KLGFE-RLELEEEGTpsELIREIKE 222
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2024359618 1789 NLALKLREIERLQAQTfmqKFEADKRAEEVLQTMEKVTKEKD 1830
Cdd:PRK05771 223 ELEEIEKERESLLEEL---KELAKKYLEELLALYEYLEIELE 261
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
865-1059 |
1.02e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 43.67 E-value: 1.02e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 865 AQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEK----AV 940
Cdd:COG3883 14 ADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREElgerAR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 941 QLQKNVEQTA---------------------QKAEQSQQETLkthqEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKE 999
Cdd:COG3883 94 ALYRSGGSVSyldvllgsesfsdfldrlsalSKIADADADLL----EELKADKAELEAKKAELEAKLAELEALKAELEAA 169
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1000 TSEMitkhDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASA 1059
Cdd:COG3883 170 KAEL----EAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAA 225
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
588-819 |
1.26e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 43.85 E-value: 1.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 588 EIKTLSAsnerMGKENeslKTKLDHANkENSDVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFAELKTQMEKV 667
Cdd:PHA02562 161 DISVLSE----MDKLN---KDKIRELN-QQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTI 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 668 KLDYE---NEMSNLKLKQENeKSQHLKEIE----ALKAKLLEVTEEKE------------QTLENLKAKLESVEDQhLVE 728
Cdd:PHA02562 233 KAEIEeltDELLNLVMDIED-PSAALNKLNtaaaKIKSKIEQFQKVIKmyekggvcptctQQISEGPDRITKIKDK-LKE 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 729 MEDTLNKLQEA----EIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDL-AALQKANSEG---KLEIQKLSEQLQA 800
Cdd:PHA02562 311 LQHSLEKLDTAidelEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVkAAIEELQAEFvdnAEELAKLQDELDK 390
|
250 260
....*....|....*....|....
gi 2024359618 801 AEKQIQNLETEK-----VSNLTKE 819
Cdd:PHA02562 391 IVKTKSELVKEKyhrgiVTDLLKD 414
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
377-1563 |
1.27e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 44.01 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 377 AEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVE---AADREKVELLNQLEEEKRKVEDLQFRVEEESitk 453
Cdd:pfam01576 12 EELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETElcaEAEEMRARLAARKQELEEILHELESRLEEEE--- 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 454 gdlERKRQISEDPENTQTKleharIKELEQSLLFEKTKADKLQREledtrvaTVSEKSRIMELERDLALrvkeVAELRGR 533
Cdd:pfam01576 89 ---ERSQQLQNEKKKMQQH-----IQDLEEQLDEEEAARQKLQLE-------KVTTEAKIKKLEEDILL----LEDQNSK 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 534 LESSKhiddvdtslSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESS----EEALRKEiktlsasnERMGKENESLKTK 609
Cdd:pfam01576 150 LSKER---------KLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMisdlEERLKKE--------EKGRQELEKAKRK 212
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 610 LDHANKENSDVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFA------ELKTQMEKVKLDYENEMSnLKLKQE 683
Cdd:pfam01576 213 LEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNalkkirELEAQISELQEDLESERA-ARNKAE 291
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 684 NEKSQHLKEIEALKAKLL----------EVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAeikvkeLDVLQAKC 753
Cdd:pfam01576 292 KQRRDLGEELEALKTELEdtldttaaqqELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQA------LEELTEQL 365
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 754 NEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLE-----------IQKLSEQLQAAEKQIQNLEtEKVSNLTKELQG 822
Cdd:pfam01576 366 EQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDsehkrkklegqLQELQARLSESERQRAELA-EKLSKLQSELES 444
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 823 KEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMK 902
Cdd:pfam01576 445 VSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQA 524
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 903 SSGDSSAQLMKMNDELRLKERQLEQIQLELTKAN----EKAVQLQKnVEQTAQKAEQSQQETLKTHQEE------LKKMQ 972
Cdd:pfam01576 525 QLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTqqleEKAAAYDK-LEKTKNRLQQELDDLLVDLDHQrqlvsnLEKKQ 603
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 973 DQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDAdikgFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSL 1052
Cdd:pfam01576 604 KKFDQMLAEEKAISARYAEERDRAEAEAREKETRALS----LARALEEALEAKEELERTNKQLRAEMEDLVSSKDDVGKN 679
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1053 SSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEkesllsqhLEMESKILLVQQDREeLWTKNEELNSENKKILKQ 1132
Cdd:pfam01576 680 VHELERSKRALEQQVEEMKTQLEELEDELQATEDAKLR--------LEVNMQALKAQFERD-LQARDEQGEEKRRQLVKQ 750
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1133 KEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLlkitqenDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREE 1212
Cdd:pfam01576 751 VRELEAELEDERKQRAQAVAAKKKLELDLKELEAQI-------DAANKGREEAVKQLKKLQAQMKDLQRELEEARASRDE 823
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1213 LEHYQKlleENDRVIKDKDDVIQRLQssyDDLARNQRELLQevsiLTAERDSAQEKDLDLKSTHIALKNEidcllqtNRS 1292
Cdd:pfam01576 824 ILAQSK---ESEKKLKNLEAELLQLQ---EDLAASERARRQ----AQQERDELADEIASGASGKSALQDE-------KRR 886
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1293 LQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNS 1372
Cdd:pfam01576 887 LEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKLQEMEGTVKSKFK 966
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1373 EKIHLLQEALFASEQRLLAEREELVNENKAVTEkltkatadavlaetafTEKinelnlekesvfskslqfeKHNEALLRE 1452
Cdd:pfam01576 967 SSIAALEAKIAQLEEQLEQESRERQAANKLVRR----------------TEK-------------------KLKEVLLQV 1011
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1453 KDEleRKYSEllDEKKSLENAFSDMKReqeldfsakrllvqenttLKYSIEALEEELKKknlenqeliacrsdlsdllke 1532
Cdd:pfam01576 1012 EDE--RRHAD--QYKDQAEKGNSRMKQ------------------LKRQLEEAEEEASR--------------------- 1048
|
1210 1220 1230
....*....|....*....|....*....|.
gi 2024359618 1533 AQDARRTLENELAAVSHAKQVLSSSFNTCSS 1563
Cdd:pfam01576 1049 ANAARRKLQRELDDATESNESMNREVSTLKS 1079
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1859-2091 |
1.34e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.85 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1859 MLKQNNLKNEEELTKSKELLNlenKKVEELKKEFEAL--KLAAAQKSQQLAALQEENVKLAEELGRSRDEVTshqKLEEE 1936
Cdd:COG3206 161 YLEQNLELRREEARKALEFLE---EQLPELRKELEEAeaALEEFRQKNGLVDLSEEAKLLLQQLSELESQLA---EARAE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1937 RSVLNNQLLEMKKSLPSN-----TLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGEnaSAKTLQ 2011
Cdd:COG3206 235 LAEAEARLAALRAQLGSGpdalpELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQ--LQQEAQ 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 2012 SVVKTLESDKLKLEEKVKNLEQKLKAKSEQpltvtspsgdiAANLLQDES-AEDKQQEIDFLNSVIVDLQRRNEELNLKI 2090
Cdd:COG3206 313 RILASLEAELEALQAREASLQAQLAQLEAR-----------LAELPELEAeLRRLEREVEVARELYESLLQRLEEARLAE 381
|
.
gi 2024359618 2091 Q 2091
Cdd:COG3206 382 A 382
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
658-794 |
1.35e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.61 E-value: 1.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 658 AELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEvteeKEQTLENLKAKLESVEDQHLVEMEDTLNKLQ 737
Cdd:PRK12704 49 KEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQ----KEENLDRKLELLEKREEELEKKEKELEQKQQ 124
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359618 738 EAEIKVKELDVLQAKCNEQTKLIGSLTQqirasEE--KLLdlaaLQKANSEGKLEIQKL 794
Cdd:PRK12704 125 ELEKKEEELEELIEEQLQELERISGLTA-----EEakEIL----LEKVEEEARHEAAVL 174
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
526-836 |
1.41e-03 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 43.69 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 526 EVAELRGRLESSKHIDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSsLKEKFESseeaLRKEIKTLSASNERMgkeNES 605
Cdd:PLN03229 437 EVEKLKEQILKAKESSSKPSELALNEMIEKLKKEIDLEYTEAVIAMG-LQERLEN----LREEFSKANSQDQLM---HPV 508
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 606 LKTKLDHANKEnsdvielWKSKLESA--IASHQQAMEELKvSFNKGVGAqtaefAELKTQMEKVKLDYenemsNLKLKQE 683
Cdd:PLN03229 509 LMEKIEKLKDE-------FNKRLSRApnYLSLKYKLDMLN-EFSRAKAL-----SEKKSKAEKLKAEI-----NKKFKEV 570
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 684 NEKSQHLKEIEALKAKLLEVTEEKEQTL-ENLKAKLESVEDQHLVEMEDTLNK--LQEAEIKVKELDVLQAKCNEQTKL- 759
Cdd:PLN03229 571 MDRPEIKEKMEALKAEVASSGASSGDELdDDLKEKVEKMKKEIELELAGVLKSmgLEVIGVTKKNKDTAEQTPPPNLQEk 650
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 760 IGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQ-IQNLETEKVSNLTKELQGKE--QKLLDLEKNLSA 836
Cdd:PLN03229 651 IESLNEEINKKIERVIRSSDLKSKIELLKLEVAKASKTPDVTEKEkIEALEQQIKQKIAEALNSSElkEKFEELEAELAA 730
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
1033-1420 |
1.55e-03 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 43.13 E-value: 1.55e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1033 DELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDR 1112
Cdd:pfam19220 20 EDLRSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERAAYGKLRRELAGLTRRLSAAEGELEELVARLAKLEAAL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1113 EELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKEL 1192
Cdd:pfam19220 100 REAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEEENKALREEAQAAEKALQRAEGELATARERLALLEQENRRL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1193 QANKDAVDVACQKHIKEREELEhyqKLLEENDRVIkdkDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDL 1272
Cdd:pfam19220 180 QALSEEQAAELAELTRRLAELE---TQLDATRARL---RALEGQLAAEQAERERAEAQLEEAVEAHRAERASLRMKLEAL 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1273 KSTHIALkneiDCLLQTNRSLQSEKEMLLKSREElcvSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKAS 1352
Cdd:pfam19220 254 TARAAAT----EQLLAEARNQLRDRDEAIRAAER---RLKEASIERDTLERRLAGLEADLERRTQQFQEMQRARAELEER 326
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359618 1353 LSSLSNFLEEmKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETA 1420
Cdd:pfam19220 327 AEMLTKALAA-KDAALERAEERIASLSDRIAELTKRFEVERAALEQANRRLKEELQRERAERALAQGA 393
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1793-1915 |
1.56e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.61 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1793 KLREIERlQAQTFMQkfEADKRAEEVLQtmEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELdMLKQNNLKN----- 1867
Cdd:PRK12704 32 KIKEAEE-EAKRILE--EAKKEAEAIKK--EALLEAKEEIHKLRNEFEKELRERRNELQKLEKRL-LQKEENLDRklell 105
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 2024359618 1868 ---EEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVK 1915
Cdd:PRK12704 106 ekrEEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISGLTAEEAK 156
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
354-1887 |
1.91e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 43.50 E-value: 1.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 354 LQEALKEKQQHIEQLLAERDLERAEVAKATSHV-GEIEQELALVRDGhdrhvlEMEAKMDQLRAMVEAADREKVEllnql 432
Cdd:TIGR01612 625 LKKIIENNNAYIDELAKISPYQVPEHLKNKDKIySTIKSELSKIYED------DIDALYNELSSIVKENAIDNTE----- 693
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 433 eeEKRKVEDLQFRVEEESITKGDLErkrqiSEDPENTQTKLEHARIKELEQSLLFEKTKADKLQRELEDTrVATVSEKsr 512
Cdd:TIGR01612 694 --DKAKLDDLKSKIDKEYDKIQNME-----TATVELHLSNIENKKNELLDIIVEIKKHIHGEINKDLNKI-LEDFKNK-- 763
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 513 imelERDLALRVKEVAELRGRLESSK-HIDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKT 591
Cdd:TIGR01612 764 ----EKELSNKINDYAKEKDELNKYKsKISEIKNHYNDQINIDNIKDEDAKQNYDKSKEYIKTISIKEDEIFKIINEMKF 839
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 592 LsaSNERMGKENESLKTKLDHANKENSDVIELWK--SKLESAIASHQQAMEELKVSFNKGVgaqtaeFAELKTQMEKvkl 669
Cdd:TIGR01612 840 M--KDDFLNKVDKFINFENNCKEKIDSEHEQFAEltNKIKAEISDDKLNDYEKKFNDSKSL------INEINKSIEE--- 908
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 670 DYENEMSNLKLKQENEKSQHLKE-IEALKAKLLEVTEEKEQTLENLKaKLESVEDQHLVEMEDTL-NKLQEAEIKVKELD 747
Cdd:TIGR01612 909 EYQNINTLKKVDEYIKICENTKEsIEKFHNKQNILKEILNKNIDTIK-ESNLIEKSYKDKFDNTLiDKINELDKAFKDAS 987
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 748 V--LQAKCNEQTKLIGSLTQQIRASEEKLldlaaLQKANSEGKLEIQKLSEQLQAAEKQIQNLET---EKVSNLTKELQ- 821
Cdd:TIGR01612 988 LndYEAKNNELIKYFNDLKANLGKNKENM-----LYHQFDEKEKATNDIEQKIEDANKNIPNIEIaihTSIYNIIDEIEk 1062
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 822 --GKEQKLLD------LEKNLSAVNQVKDSLE--KELQLLKE---KFTSAVDGAENAQRAM-QVMETKLKEreereqqLT 887
Cdd:TIGR01612 1063 eiGKNIELLNkeileeAEINITNFNEIKEKLKhyNFDDFGKEeniKYADEINKIKDDIKNLdQKIDHHIKA-------LE 1135
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 888 EAKVKLENDIaeimkssgdssaqlmkmnDELRLKERQLEQIQlELTKANEKAVQLQKNVEQTAQKAEQSqqetlKTHQEE 967
Cdd:TIGR01612 1136 EIKKKSENYI------------------DEIKAQINDLEDVA-DKAISNDDPEEIEKKIENIVTKIDKK-----KNIYDE 1191
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 968 LKKMQDQLTDMKKQmETSQNQYKDLQAKYEKETSEM-ITKHDADIKgfkqnllDAEEALKAAQKKNDELetqaEELKKQA 1046
Cdd:TIGR01612 1192 IKKLLNEIAEIEKD-KTSLEEVKGINLSYGKNLGKLfLEKIDEEKK-------KSEHMIKAMEAYIEDL----DEIKEKS 1259
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1047 EQAKSLSSVLASARKEIELMS-----DKMRDLISEKetlaQERNTLKLEKESL-LSQHLEMESKILLVQQDREELWTKNE 1120
Cdd:TIGR01612 1260 PEIENEMGIEMDIKAEMETFNishddDKDHHIISKK----HDENISDIREKSLkIIEDFSEESDINDIKKELQKNLLDAQ 1335
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1121 ELNSENKKILKQ--------KEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSS----ESTL--- 1185
Cdd:TIGR01612 1336 KHNSDINLYLNEianiynilKLNKIKKIIDEVKEYTKEIEENNKNIKDELDKSEKLIKKIKDDINLEECkskiESTLddk 1415
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1186 -----LQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQ--SSYDDLARNQRELLQEVSIL 1258
Cdd:TIGR01612 1416 didecIKKIKELKNHILSEESNIDTYFKNADENNENVLLLFKNIEMADNKSQHILKIKkdNATNDHDFNINELKEHIDKS 1495
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1259 TAERDSAQ------EKDLDL-------------KSTHIALKNEIDcllqtnrSLQSEKEMLLKSREEL--CVSLANTANE 1317
Cdd:TIGR01612 1496 KGCKDEADknakaiEKNKELfeqykkdvtellnKYSALAIKNKFA-------KTKKDSEIIIKEIKDAhkKFILEAEKSE 1568
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1318 NQALKLRKDemQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNsekihllqealfaseqrllaereELV 1397
Cdd:TIGR01612 1569 QKIKEIKKE--KFRIEDDAAKNDKSNKAAIDIQLSLENFENKFLKISDIKKKIN-----------------------DCL 1623
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1398 NENKAVTEKLTKATADAvlAETAFTEKINELNLEKEsvFSKSLQFEKHN-EALLREKDELERKYSELLDE----KKSLEN 1472
Cdd:TIGR01612 1624 KETESIEKKISSFSIDS--QDTELKENGDNLNSLQE--FLESLKDQKKNiEDKKKELDELDSEIEKIEIDvdqhKKNYEI 1699
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1473 AFsdMKREQELDFSAKRLLVQENTTLKYSIEALEEELKKKNLE----NQELIACRSDLSDLLKEAQDARRTLENELAAVS 1548
Cdd:TIGR01612 1700 GI--IEKIKEIAIANKEEIESIKELIEPTIENLISSFNTNDLEgidpNEKLEEYNTEIGDIYEEFIELYNIIAGCLETVS 1777
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1549 HAKQVLSSSFNT-CSSDIEILnrERTELQDKCQKLTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGF--LEKEV 1625
Cdd:TIGR01612 1778 KEPITYDEIKNTrINAQNEFL--KIIEIEKKSKSYLDDIEAKEFDRIINHFKKKLDHVNDKFTKEYSKINEGFddISKSI 1855
|
1370 1380 1390 1400 1410 1420 1430 1440
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1626 EEMREKnkeflTEKELLVQEKEKSETKLEEVIKEKMILYK-ETEQLASKIEQLKSdftSLSVSKAELEDVHSCVSVMLDE 1704
Cdd:TIGR01612 1856 ENVKNS-----TDENLLFDILNKTKDAYAGIIGKKYYSYKdEAEKIFINISKLAN---SINIQIQNNSGIDLFDNINIAI 1927
|
1450 1460 1470 1480 1490 1500 1510 1520
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1705 LQHKYEVTEKE-KMELVQENES-----LHAEWKSLVII--NEEILKEKEK----LSKEYYKLHEKVVALLEQTDAdfscr 1772
Cdd:TIGR01612 1928 LSSLDSEKEDTlKFIPSPEKEPeiytkIRDSYDTLLDIfkKSQDLHKKEQdtlnIIFENQQLYEKIQASNELKDT----- 2002
|
1530 1540 1550 1560 1570 1580 1590 1600
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1773 LLVSEGKHELLLEEMSNLALKLREIERL--QAQTFMQKFEADKRaEEVLQTMEKVTKEKD--------AIHQEK----IE 1838
Cdd:TIGR01612 2003 LSDLKYKKEKILNDVKLLLHKFDELNKLscDSQNYDTILELSKQ-DKIKEKIDNYEKEKEkfgidfdvKAMEEKfdndIK 2081
|
1610 1620 1630 1640
....*....|....*....|....*....|....*....|....*....
gi 2024359618 1839 TLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEE 1887
Cdd:TIGR01612 2082 DIEKFENNYKHSEKDNHDFSEEKDNIIQSKKKLKELTEAFNTEIKIIED 2130
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1131-1370 |
2.06e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 2.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1131 KQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQAdllKITQENDALRSSESTLLQQLKELQANkdavdvacqkhikeR 1210
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALER---RIAALARRIRALEQELAALEAELAEL--------------E 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1211 EELEHYQKLLEENDRVIKDKDDVIQRL-QSSYDDLARNQRELLQEVSILTAerdsaqekdldLKSTHIALKNEIDCLLQT 1289
Cdd:COG4942 90 KEIAELRAELEAQKEELAELLRALYRLgRQPPLALLLSPEDFLDAVRRLQY-----------LKYLAPARREQAEELRAD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1290 NRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREA 1369
Cdd:COG4942 159 LAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
.
gi 2024359618 1370 S 1370
Cdd:COG4942 239 A 239
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
711-1049 |
2.28e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 43.50 E-value: 2.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 711 LENLKAKLESVED--QHLVEMEDTLNKLQEAEIkVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQkANSEGK 788
Cdd:PTZ00108 1004 LERELARLSNKVRfiKHVINGELVITNAKKKDL-VKELKKLGYVRFKDIIKKKSEKITAEEEEGAEEDDEADD-EDDEEE 1081
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 789 LEIQKLSEQLqaAEKQIQNLETEKVSNLTKELQGKEQKLLDLEKnlsavNQVKDSLEKELQLLKEKFTS--AVDGAENAQ 866
Cdd:PTZ00108 1082 LGAAVSYDYL--LSMPIWSLTKEKVEKLNAELEKKEKELEKLKN-----TTPKDMWLEDLDKFEEALEEqeEVEEKEIAK 1154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 867 RAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERqleqiQLELTKANEKAVQLQKNV 946
Cdd:PTZ00108 1155 EQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDD-----KPDNKKSNSSGSDQEDDE 1229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 947 EQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQ-AKYEKETSEMITKHDADIKGFKqnlLDAEEAL 1025
Cdd:PTZ00108 1230 EQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKrVSAVQYSPPPPSKRPDGESNGG---SKPSSPT 1306
|
330 340
....*....|....*....|....
gi 2024359618 1026 KAAQKKNDELETQAEELKKQAEQA 1049
Cdd:PTZ00108 1307 KKKVKKRLEGSLAALKKKKKSEKK 1330
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
349-614 |
2.39e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 2.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 349 SGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlvrdghdrhvlEMEAKMDQLRAMVEAADREKVEL 428
Cdd:COG4942 13 LAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLA-----------ALERRIAALARRIRALEQELAAL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 429 LNQLEEEKRKVEDLQFRVEeesitkgdlERKRQISEDPENTQTKLEHARIKeleqsLLFEKTKADKLQRELEDTRVATVS 508
Cdd:COG4942 82 EAELAELEKEIAELRAELE---------AQKEELAELLRALYRLGRQPPLA-----LLLSPEDFLDAVRRLQYLKYLAPA 147
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 509 EKSRIMELERDLAlrvkEVAELRGRLESSKhiddvDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSE---EAL 585
Cdd:COG4942 148 RREQAEELRADLA----ELAALRAELEAER-----AELEALLAELEEERAALEALKAERQKLLARLEKELAELAaelAEL 218
|
250 260
....*....|....*....|....*....
gi 2024359618 586 RKEIKTLSASNERMGKENESLKTKLDHAN 614
Cdd:COG4942 219 QQEAEELEALIARLEAEAAAAAERTPAAG 247
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
376-894 |
2.47e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 42.81 E-value: 2.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 376 RAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEaadrEKVELLNQLEEEKRKVEDLQFRVEEESITKGD 455
Cdd:pfam05557 1 RAELIESKARLSQLQNEKKQMELEHKRARIELEKKASALKRQLD----RESDRNQELQKRIRLLEKREAEAEEALREQAE 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 456 LERKRQISEDPENTQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRV---ATVSEKSRIMELERDLALRVKEVAELRG 532
Cdd:pfam05557 77 LNRLKKKYLEALNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELelqSTNSELEELQERLDLLKAKASEAEQLRQ 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 533 RLESSKH-IDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEkFESSEEALRKEIKTLSASNERMG---KENESLKT 608
Cdd:pfam05557 157 NLEKQQSsLAEAEQRIKELEFEIQSQEQDSEIVKNSKSELARIPE-LEKELERLREHNKHLNENIENKLllkEEVEDLKR 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 609 KLDHANKENSDVI--ELWKSKLESAIASHQQAMEELKVSF----------------NKGVGAQTAEFAELKTQMEKVKLD 670
Cdd:pfam05557 236 KLEREEKYREEAAtlELEKEKLEQELQSWVKLAQDTGLNLrspedlsrrieqlqqrEIVLKEENSSLTSSARQLEKARRE 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 671 YENEMSNL--KLKQENEKSQHLKE-IEALKAKLLEVTEEKE---QTLENLKAKLESVE-----DQHLVEMEDTLNKLQEA 739
Cdd:pfam05557 316 LEQELAQYlkKIEDLNKKLKRHKAlVRRLQRRVLLLTKERDgyrAILESYDKELTMSNyspqlLERIEEAEDMTQKMQAH 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 740 EIKVK-ELDVLQAKCNEQTKLIGSLTQ--QIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVS-N 815
Cdd:pfam05557 396 NEEMEaQLSVAEEELGGYKQQAQTLERelQALRQQESLADPSYSKEEVDSLRRKLETLELERQRLREQKNELEMELERrC 475
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 816 LTKELQGKEQKLLDLEKNLSAV-----NQVKDSLEKELQLLKEKFTSAVDGAENAQR-AMQVMETKLKEREEREQQLTEA 889
Cdd:pfam05557 476 LQGDYDPKKTKVLHLSMNPAAEayqqrKNQLEKLQAEIERLKRLLKKLEDDLEQVLRlPETTSTMNFKEVLDLRKELESA 555
|
....*
gi 2024359618 890 KVKLE 894
Cdd:pfam05557 556 ELKNQ 560
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
355-748 |
2.51e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.19 E-value: 2.51e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 355 QEALK-EKQQHIEQLLAERDLERAEVAKAtshvGEIEQELALVRDgHDRHVLEMEAKMDQLRamveaadrekvellnqLE 433
Cdd:pfam17380 298 QERLRqEKEEKAREVERRRKLEEAEKARQ----AEMDRQAAIYAE-QERMAMERERELERIR----------------QE 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 434 EEKRKVEdlqfRVEEESITkgdlerkrqisedpentqtkLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRi 513
Cdd:pfam17380 357 ERKRELE----RIRQEEIA--------------------MEISRMRELERLQMERQQKNERVRQELEAARKVKILEEER- 411
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 514 melERDLALRVKEVAELRGRLESSKhiddvdtslsllqeisslqekmaaagkehQREMSSLKEKFESSEEALRKEIKTLS 593
Cdd:pfam17380 412 ---QRKIQQQKVEMEQIRAEQEEAR-----------------------------QREVRRLEEERAREMERVRLEEQERQ 459
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 594 ASNERMGKENESLKTK---LDHANKENSDVIELWKSKLESAIASHQQAMEElkvsfnkgvgaQTAEFAELKTQMEKVKLD 670
Cdd:pfam17380 460 QQVERLRQQEEERKRKkleLEKEKRDRKRAEEQRRKILEKELEERKQAMIE-----------EERKRKLLEKEMEERQKA 528
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359618 671 YENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEkeqtlenlKAKLESVEDQhlvemEDTLNKLQEAEIKVKELDV 748
Cdd:pfam17380 529 IYEEERRREAEEERRKQQEMEERRRIQEQMRKATEE--------RSRLEAMERE-----REMMRQIVESEKARAEYEA 593
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
463-699 |
2.70e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 2.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 463 SEDPENTQTKLE--HARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRlesskhI 540
Cdd:COG4942 19 ADAAAEAEAELEqlQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE------I 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 541 DDVDTSLSLLQEisSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKeIKTLSASNERMGKENESLKTKLDHANKENSDv 620
Cdd:COG4942 93 AELRAELEAQKE--ELAELLRALYRLGRQPPLALLLSPEDFLDAVRR-LQYLKYLAPARREQAEELRADLAELAALRAE- 168
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359618 621 IELWKSKLESAIASHQQAMEELKvsfnkgvgAQTAEFAELKTQMEKVKLDYENEMSNLKlKQENEKSQHLKEIEALKAK 699
Cdd:COG4942 169 LEAERAELEALLAELEEERAALE--------ALKAERQKLLARLEKELAELAAELAELQ-QEAEELEALIARLEAEAAA 238
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1795-2037 |
2.72e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.21 E-value: 2.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1795 REIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKS 1874
Cdd:PTZ00121 1278 RKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAAD 1357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1875 KELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSN 1954
Cdd:PTZ00121 1358 EAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAK 1437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1955 TLRESTLKKEIDEERASLQKSISDtsalITQKDEELEKLRNeitvLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQK 2034
Cdd:PTZ00121 1438 KKAEEAKKADEAKKKAEEAKKAEE----AKKKAEEAKKADE----AKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAK 1509
|
...
gi 2024359618 2035 LKA 2037
Cdd:PTZ00121 1510 KKA 1512
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1369-1591 |
2.77e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 2.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1369 ASNSEKIHLLQEALFASEQRLlAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEA 1448
Cdd:COG4942 16 AAQADAAAEAEAELEQLQQEI-AELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1449 LLREKDELERKYSELLDE--KKSLENAFSDMKREQELDFSAKRL--LVQENTTLKYSIEALEEELKKKNLENQELIACRS 1524
Cdd:COG4942 95 LRAELEAQKEELAELLRAlyRLGRQPPLALLLSPEDFLDAVRRLqyLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024359618 1525 DLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKE 1591
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
583-865 |
2.90e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 42.64 E-value: 2.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 583 EALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAE----FA 658
Cdd:COG5185 242 ESELEDLAQTSDKLEKLVEQNTDLRLEKLGENAESSKRLNENANNLIKQFENTKEKIAEYTKSIDIKKATESLEeqlaAA 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 659 ELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEqtLENLKAKLESVEDQHLVEMEDTLNKLQE 738
Cdd:COG5185 322 EAEQELEESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVE--LSKSSEELDSFKDTIESTKESLDEIPQN 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 739 AEIKVKELDVLQAKcneqtkligSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVSNLTK 818
Cdd:COG5185 400 QRGYAQEILATLED---------TLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREADEESQSRLEEAYD 470
|
250 260 270 280
....*....|....*....|....*....|....*....|....*...
gi 2024359618 819 EL-QGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENA 865
Cdd:COG5185 471 EInRSVRSKKEDLNEELTQIESRVSTLKATLEKLRAKLERQLEGVRSK 518
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
790-1049 |
2.99e-03 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 42.53 E-value: 2.99e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 790 EIQKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQKLLD-LEKNLSAvnqvKDSLEKELQLLKEKFTSAVDGAENAQRA 868
Cdd:pfam06160 238 EIQQLEEQLEENLALLENLELDEAEEALEEIEERIDQLYDlLEKEVDA----KKYVEKNLPEIEDYLEHAEEQNKELKEE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 869 MQ-VMET-KLKEREEREQQLTEAKVK-LENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKn 945
Cdd:pfam06160 314 LErVQQSyTLNENELERVRGLEKQLEeLEKRYDEIVERLEEKEVAYSELQEELEEILEQLEEIEEEQEEFKESLQSLRK- 392
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 946 VEQTAqkaeqsqqetlkthQEELKKMQDQLTDMKKQMETSQ-----NQYKDlqakYEKETSEMITKHDADIKGFKQNLLD 1020
Cdd:pfam06160 393 DELEA--------------REKLDEFKLELREIKRLVEKSNlpglpESYLD----YFFDVSDEIEDLADELNEVPLNMDE 454
|
250 260
....*....|....*....|....*....
gi 2024359618 1021 AEEALKAAQKKNDELETQAEELKKQAEQA 1049
Cdd:pfam06160 455 VNRLLDEAQDDVDTLYEKTEELIDNATLA 483
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1424-1891 |
3.44e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 42.70 E-value: 3.44e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1424 KINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIE 1503
Cdd:TIGR04523 191 KIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLS 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1504 ALEEELKK-----KNLENQeLIACRSDLSDLLKE-AQDARRTLENELAAVSHAKQVLSS-------SFNTCSSDIEILNR 1570
Cdd:TIGR04523 271 EKQKELEQnnkkiKELEKQ-LNQLKSEISDLNNQkEQDWNKELKSELKNQEKKLEEIQNqisqnnkIISQLNEQISQLKK 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1571 ERTELQDKCQKLTGEVENMKENLTVEKKarilDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSE 1650
Cdd:TIGR04523 350 ELTNSESENSEKQRELEEKQNEIEKLKK----ENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLE 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1651 TKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVM-------LDELQHKYEVTEKEKMELVQEN 1723
Cdd:TIGR04523 426 KEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSinkikqnLEQKQKELKSKEKELKKLNEEK 505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1724 ESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQTDADfscrllVSEGKHELLLEEMSNLALKLREIERLQAQ 1803
Cdd:TIGR04523 506 KELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKD------DFELKKENLEKEIDEKNKEIEELKQTQKS 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1804 TFMQKFEADKRAEEVLQTMEKVTKEKdaihQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENK 1883
Cdd:TIGR04523 580 LKKKQEEKQELIDQKEKEKKDLIKEI----EEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIK 655
|
....*...
gi 2024359618 1884 KVEELKKE 1891
Cdd:TIGR04523 656 EIRNKWPE 663
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1613-2011 |
3.46e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.45 E-value: 3.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1613 ELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAele 1692
Cdd:COG4717 50 RLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ--- 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1693 dvhscvsvmLDELQHKYEVTEKEKMELVQENESLHAEWKSLviinEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSCR 1772
Cdd:COG4717 127 ---------LLPLYQELEALEAELAELPERLEELEERLEEL----RELEEELEELEAELAELQEELEELLEQLSLATEEE 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1773 LLVSEGKHELLLEEMSNL--ALKLREIERLQAQTFMQKFEADKRAEEVLQTMEK-------------------------- 1824
Cdd:COG4717 194 LQDLAEELEELQQRLAELeeELEEAQEELEELEEELEQLENELEAAALEERLKEarlllliaaallallglggsllslil 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1825 -------------------VTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKV 1885
Cdd:COG4717 274 tiagvlflvlgllallfllLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELL 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1886 EELKKEFEALKLAAAQKSQQlAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLpsNTLRESTLKKEI 1965
Cdd:COG4717 354 REAEELEEELQLEELEQEIA-ALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGEL--EELLEALDEEEL 430
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 2024359618 1966 DEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQ 2011
Cdd:COG4717 431 EEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAELLQ 476
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
858-1194 |
3.47e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 42.63 E-value: 3.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 858 AVDGAENAQRAMQVMETKLKEREER---EQQLTEAKVKLEN---DIAEIMKSSGDSSAQLMKMNDELRLKE---RQLEQI 928
Cdd:COG3096 270 AADYMRHANERRELSERALELRRELfgaRRQLAEEQYRLVEmarELEELSARESDLEQDYQAASDHLNLVQtalRQQEKI 349
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 929 ---QLELTKANEKAVQLQKNVEQtAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQN---QYKD-LQAKYEKE-- 999
Cdd:COG3096 350 eryQEDLEELTERLEEQEEVVEE-AAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTraiQYQQaVQALEKARal 428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1000 ------TSEMITKHDADIK-----------GFKQNLLDA-------EEALKAAQKKNDELET------------QAEELK 1043
Cdd:COG3096 429 cglpdlTPENAEDYLAAFRakeqqateevlELEQKLSVAdaarrqfEKAYELVCKIAGEVERsqawqtarellrRYRSQQ 508
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1044 KQAEQAKSLSSVLASARKEIELMSDKMRDL----------ISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDRE 1113
Cdd:COG3096 509 ALAQRLQQLRAQLAELEQRLRQQQNAERLLeefcqrigqqLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLE 588
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1114 ELWTKNEELNSENKKILKQKEAAEaKSRQESTEKVAlisEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQ 1193
Cdd:COG3096 589 QLRARIKELAARAPAWLAAQDALE-RLREQSGEALA---DSQEVTAAMQQLLEREREATVERDELAARKQALESQIERLS 664
|
.
gi 2024359618 1194 A 1194
Cdd:COG3096 665 Q 665
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
708-956 |
3.67e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 42.73 E-value: 3.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 708 EQTLENLKA-----KLESVEdqhlvEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQK 782
Cdd:PRK10929 29 TQELEQAKAaktpaQAEIVE-----ALQSALNWLEERKGSLERAKQYQQVIDNFPKLSAELRQQLNNERDEPRSVPPNMS 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 783 ANsEGKLEIQKLSEQLQAAEKQIQNlETEKVSNLTKELQGKEQKLLDLEKNLSAVnqvkdslEKELQLLKeKFTSAVDGA 862
Cdd:PRK10929 104 TD-ALEQEILQVSSQLLEKSRQAQQ-EQDRAREISDSLSQLPQQQTEARRQLNEI-------ERRLQTLG-TPNTPLAQA 173
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 863 ENAQRAMQVMETKLKEREEREQQLteakvklendiaeimksSGDSSAQLMKMNDELRLKERQLEQIQLELTKaNEKAVQL 942
Cdd:PRK10929 174 QLTALQAESAALKALVDELELAQL-----------------SANNRQELARLRSELAKKRSQQLDAYLQALR-NQLNSQR 235
|
250
....*....|....*...
gi 2024359618 943 QKNVEQ----TAQKAEQS 956
Cdd:PRK10929 236 QREAERalesTELLAEQS 253
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1815-1986 |
3.73e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.59 E-value: 3.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1815 AEEVLQTMEKVTKEKDAIHQEK---------IETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKskellnLENKKV 1885
Cdd:PRK11281 38 EADVQAQLDALNKQKLLEAEDKlvqqdleqtLALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEA------LKDDND 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1886 EELKKEFEALKLAA-----AQKSQQLAALQE------------------------ENVKLAEEL---------GRSRDEV 1927
Cdd:PRK11281 112 EETRETLSTLSLRQlesrlAQTLDQLQNAQNdlaeynsqlvslqtqperaqaalyANSQRLQQIrnllkggkvGGKALRP 191
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024359618 1928 TSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEID---EERASLQKSISDTSALITQK 1986
Cdd:PRK11281 192 SQRVLLQAEQALLNAQNDLQRKSLEGNTQLQDLLQKQRDyltARIQRLEHQLQLLQEAINSK 253
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
1834-1952 |
3.73e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 42.51 E-value: 3.73e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1834 QEKIETL-ASLENSRQTNEKLQNELDMLKQNNLKNEEELtkskellnleNKKVEELKKEFEALKLAAAQKSQQ-LAALQE 1911
Cdd:PRK00409 515 KEKLNELiASLEELERELEQKAEEAEALLKEAEKLKEEL----------EEKKEKLQEEEDKLLEEAEKEAQQaIKEAKK 584
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 2024359618 1912 ENVKLAEELGRSRDEVTSHQK---LEEERSVLNNQLLEMKKSLP 1952
Cdd:PRK00409 585 EADEIIKELRQLQKGGYASVKaheLIEARKRLNKANEKKEKKKK 628
|
|
| CCDC73 |
pfam15818 |
Coiled-coil domain-containing protein 73 family; CCDC73 is a family of eukaryotic coiled-coil ... |
1600-2026 |
3.93e-03 |
|
Coiled-coil domain-containing protein 73 family; CCDC73 is a family of eukaryotic coiled-coil containing proteins. The function is not known. The alternative name is sarcoma antigen NY-SAR-79.
Pssm-ID: 464893 [Multi-domain] Cd Length: 1048 Bit Score: 42.63 E-value: 3.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1600 RILDKESFLLERME-----------LQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETE 1668
Cdd:pfam15818 1 QLLDFKTSLLEALEelrmrreaetqYEEQIGKIIVETQELKWQKETLQNQKETLAKQHKEAMAVFKKQLQMKMCALEEEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1669 ---QLASK-----IEQLKSDFTSLSVSKAELEDVhscVSVMLDELQ----------------HKYEVTEKEKMELVQEN- 1723
Cdd:pfam15818 81 gkyQLATEikekeIEGLKETLKALQVSKYSLQKK---VSEMEQKLQlhllakedhhkqlneiEKYYATITGQFGLVKENh 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1724 ESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKvvalLEQTDADFSCRLLVSEGKHElllEEMSNLALKLREIERLQAQ 1803
Cdd:pfam15818 158 GKLEQNVQEAIQLNKRLSALNKKQESEICSLKKE----LKKVTSDLIKSKVTCQYKMG---EENINLTIKEQKFQELQER 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1804 TFMQkfeadkraeevLQTMEKVTKEKDAIHQEKIETLAS-------LENSRQTNEKLQNELDMLKQNN--LKNEEELTKS 1874
Cdd:pfam15818 231 LNME-----------LELNKKINEEITHIQEEKQDIIISfqhmqqlLQQQTQANTEMEAELKALKENNqtLERDNELQRE 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1875 K------ELLNLENKKVEEL---KKEFEALKLAAAQKSQQLAALQEENVKLAEElgrsRDEVTSHQKLEEERSVLNNQLL 1945
Cdd:pfam15818 300 KvkeneeKFLNLQNEHEKALgtwKKHVEELNGEINEIKNELSSLKETHIKLQEH----YNKLCNQKKFEEDKKFQNVPEV 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1946 EMKKS-LPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKL 2024
Cdd:pfam15818 376 NNENSeMSTEKSENLIIQKYNSEQEIREENTKSFCSDTEYRETEKKKGPPVEEIIIEDLQVLEKSFKNEIDTSVPQDKNQ 455
|
..
gi 2024359618 2025 EE 2026
Cdd:pfam15818 456 SE 457
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
1810-1950 |
4.17e-03 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 42.15 E-value: 4.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1810 EADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELlnleNKKVEELK 1889
Cdd:pfam06160 267 EIEERIDQLYDLLEKEVDAKKYVEKNLPEIEDYLEHAEEQNKELKEELERVQQSYTLNENELERVRGL----EKQLEELE 342
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359618 1890 KEFEALKLAAAQKSQ--------------QLAALQEENVKLAEELGRSR-DEVTSHQKLEEERSVLNNQLLEMKKS 1950
Cdd:pfam06160 343 KRYDEIVERLEEKEVayselqeeleeileQLEEIEEEQEEFKESLQSLRkDELEAREKLDEFKLELREIKRLVEKS 418
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
476-746 |
4.77e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 42.22 E-value: 4.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 476 ARIKELEqsLLFEKTKADKLQRELEDTRVATVSEKSrimelERDLALRVKEVAELRGRLesSKHIDDVDTSLSLLQEISS 555
Cdd:PRK05771 4 VRMKKVL--IVTLKSYKDEVLEALHELGVVHIEDLK-----EELSNERLRKLRSLLTKL--SEALDKLRSYLPKLNPLRE 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 556 LQEKMaaagkehqrEMSSLKEKFESSEEALRKEIKTLSASNERMgKENESLKTKLDHANKE-------NSDVIELWKSKL 628
Cdd:PRK05771 75 EKKKV---------SVKSLEELIKDVEEELEKIEKEIKELEEEI-SELENEIKELEQEIERlepwgnfDLDLSLLLGFKY 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 629 ESAIAS--HQQAMEELKVSFNKGVgAQTAEFAE---------LKTQMEKV-KLDYENEMSNLKLKQENEKSQhlkEIEAL 696
Cdd:PRK05771 145 VSVFVGtvPEDKLEELKLESDVEN-VEYISTDKgyvyvvvvvLKELSDEVeEELKKLGFERLELEEEGTPSE---LIREI 220
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2024359618 697 KAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKEL 746
Cdd:PRK05771 221 KEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELERAEALSKFL 270
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
728-977 |
4.97e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.84 E-value: 4.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 728 EMEDTLNKLQEAEIkVKELDVLQAKCNEQTKLIGSLTQQIraseEKLLDLaaLQKANSEGKLEIQKLSEQLQAAEKQIQN 807
Cdd:PRK05771 17 YKDEVLEALHELGV-VHIEDLKEELSNERLRKLRSLLTKL----SEALDK--LRSYLPKLNPLREEKKKVSVKSLEELIK 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 808 LETEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEK------ELQLLKE-KFTSAVDGA--ENAQRAMQVMETKLKE 878
Cdd:PRK05771 90 DVEEELEKIEKEIKELEEEISELENEIKELEQEIERLEPwgnfdlDLSLLLGfKYVSVFVGTvpEDKLEELKLESDVENV 169
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 879 REEREQQLTE-----AKVKLENDIAEIMK----------SSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQ 943
Cdd:PRK05771 170 EYISTDKGYVyvvvvVLKELSDEVEEELKklgferleleEEGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEEL 249
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 2024359618 944 KNV----EQTAQKAEQSQQ--ETLKT----------HQEELKKMQDQLTD 977
Cdd:PRK05771 250 LALyeylEIELERAEALSKflKTDKTfaiegwvpedRVKKLKELIDKATG 299
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
1810-1951 |
5.06e-03 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 41.75 E-value: 5.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1810 EADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELlnleNKKVEELK 1889
Cdd:PRK04778 286 EIQERIDQLYDILEREVKARKYVEKNSDTLPDFLEHAKEQNKELKEEIDRVKQSYTLNESELESVRQL----EKQLESLE 361
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359618 1890 KEFEALKLAAAQKSQ---QLAALQEENVKLAEELGRSRDEVTSH-QKLEEERSVLNNQLLEMKKSL 1951
Cdd:PRK04778 362 KQYDEITERIAEQEIaysELQEELEEILKQLEEIEKEQEKLSEMlQGLRKDELEAREKLERYRNKL 427
|
|
| Surf_Exclu_PgrA |
TIGR04320 |
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface ... |
933-1052 |
5.24e-03 |
|
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface proteins of a number of Firmutes. Many members have LPXTG C-terminal anchoring motifs and a substantial number have the KxYKxGKxW putative sorting signal at the N-terminus. The tetracycline resistance plasmid pCF10 in Enterococcus faecalis promotes conjugal plasmid transfer in response to sex pheromones, but PgrA/Sec10 encoded by that plasmid, a member of this family, specifically inhibits the ability of cells to receive homologous plasmids. The phenomenon is called surface exclusion.
Pssm-ID: 275124 [Multi-domain] Cd Length: 356 Bit Score: 41.64 E-value: 5.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 933 TKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMkkqmetsQNQYKDLQAKYEKETsemitkhdadik 1012
Cdd:TIGR04320 256 LAALQAKLATAQADLAAAQTALNTAQAALTSAQTAYAAAQAALATA-------QKELANAQAQALQTA------------ 316
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 2024359618 1013 gfKQNLLDAEEALKAAQKKNDELETQAEELK-KQAEQAKSL 1052
Cdd:TIGR04320 317 --QNNLATAQAALANAEARLAKAKEALANLNaDLAKKQAAL 355
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
724-899 |
5.46e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 40.68 E-value: 5.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 724 QHLVEMEDTLNKLQEAEikvKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANsegKLEIQKLSEQLQAAEK 803
Cdd:COG1579 7 RALLDLQELDSELDRLE---HRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRL---ELEIEEVEARIKKYEE 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 804 QIQNLETEK-VSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAmqvMETKLKEREER 882
Cdd:COG1579 81 QLGNVRNNKeYEALQKEIESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAE---LDEELAELEAE 157
|
170
....*....|....*..
gi 2024359618 883 EQQLTEAKVKLENDIAE 899
Cdd:COG1579 158 LEELEAEREELAAKIPP 174
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
551-773 |
6.40e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.29 E-value: 6.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 551 QEISSLQEKMAAAgKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELwKSKLES 630
Cdd:COG4942 20 DAAAEAEAELEQL-QQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE-IAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 631 AIASHQQAMEELKVSFNKGVGAQTAEF---AELKTQMEKvKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEK 707
Cdd:COG4942 98 ELEAQKEELAELLRALYRLGRQPPLALllsPEDFLDAVR-RLQYLKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024359618 708 EQTLENLKAKLESVEDQhLVEMEDTLNKLQEAEIKV-KELDVLQAKCNEQTKLIGSLTQQIRASEEK 773
Cdd:COG4942 177 EALLAELEEERAALEAL-KAERQKLLARLEKELAELaAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
990-1293 |
6.90e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 41.82 E-value: 6.90e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 990 KDLQAKYEKETSemITKHDADIKGFKQNLLDAEEALKAAQKKNDELEtqaeELKKQAEQAKSLssvLASARKEIELMSDk 1069
Cdd:PRK11281 39 ADVQAQLDALNK--QKLLEAEDKLVQQDLEQTLALLDKIDRQKEETE----QLKQQLAQAPAK---LRQAQAELEALKD- 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1070 mrdliSEKETLAQERNTLKLEkesllsqhlEMESKILLVQQDREELwtkNEELNSENKKILKQkeaaeaksrQESTEKV- 1148
Cdd:PRK11281 109 -----DNDEETRETLSTLSLR---------QLESRLAQTLDQLQNA---QNDLAEYNSQLVSL---------QTQPERAq 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1149 ALISEKSKLLSEIETaqadLLKITQEND-ALRSSESTLLQ------------QLKELQANKDAVDVACQKHIKEREE--- 1212
Cdd:PRK11281 163 AALYANSQRLQQIRN----LLKGGKVGGkALRPSQRVLLQaeqallnaqndlQRKSLEGNTQLQDLLQKQRDYLTARiqr 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1213 LEHYQKLLEE--NDRVIKDKDDVIQRLQSSyDDLARNQ--RELLQEVSILTAERD---SAQEKDLDLKSTHIALKNEIDC 1285
Cdd:PRK11281 239 LEHQLQLLQEaiNSKRLTLSEKTVQEAQSQ-DEAARIQanPLVAQELEINLQLSQrllKATEKLNTLTQQNLRVKNWLDR 317
|
....*...
gi 2024359618 1286 LLQTNRSL 1293
Cdd:PRK11281 318 LTQSERNI 325
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
356-859 |
7.01e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 41.68 E-value: 7.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 356 EALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHvlEMEAKMDQLRAMVEAADREKVELLNQLEEE 435
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLL--PLYQELEALEAELAELPERLEELEERLEEL 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 436 KRKVEDLQFRVEEESITKGDLERKRQisEDPENTQTKLEHA--RIKELEQSLLFEKTKADKLQRELEDTRVAtvseksri 513
Cdd:COG4717 159 RELEEELEELEAELAELQEELEELLE--QLSLATEEELQDLaeELEELQQRLAELEEELEEAQEELEELEEE-------- 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 514 MELERDLALRVKEVAELRGRLESSKHIDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLS 593
Cdd:COG4717 229 LEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQ 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 594 ASNERMGKENESLKTKLDHANKENSDVIELWKSKLESaIASHQQAMEELkvsfnkgvgaqtaefAELKTQMEKVKLdyen 673
Cdd:COG4717 309 ALPALEELEEEELEELLAALGLPPDLSPEELLELLDR-IEELQELLREA---------------EELEEELQLEEL---- 368
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 674 emsnlklkqENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQ---HLVEMEDTLNKLQEAEIKVKeldvlq 750
Cdd:COG4717 369 ---------EQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQleeLLGELEELLEALDEEELEEE------ 433
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 751 akcneqtklIGSLTQQIRASEEklldlaalqkansegklEIQKLSEQLQAAEKQIQNLET-EKVSNLTKELQGKEQKLLD 829
Cdd:COG4717 434 ---------LEELEEELEELEE-----------------ELEELREELAELEAELEQLEEdGELAELLQELEELKAELRE 487
|
490 500 510
....*....|....*....|....*....|
gi 2024359618 830 LEKNLSAVNQVKDSLEKELQLLKEKFTSAV 859
Cdd:COG4717 488 LAEEWAALKLALELLEEAREEYREERLPPV 517
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
790-1121 |
7.06e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 41.04 E-value: 7.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 790 EIQKLSEQLQAAEKQIQNLETEKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAM 869
Cdd:COG4372 17 GLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAEL 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 870 QVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQT 949
Cdd:COG4372 97 AQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQAL 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 950 AQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQ 1029
Cdd:COG4372 177 SEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVI 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1030 KKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQ 1109
Cdd:COG4372 257 LKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILL 336
|
330
....*....|..
gi 2024359618 1110 QDREELWTKNEE 1121
Cdd:COG4372 337 AELADLLQLLLV 348
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1041-1277 |
8.21e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.45 E-value: 8.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1041 ELKKQAEQAKSLSSVLASARKeIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEmeSKILLVQQDREELWTKNE 1120
Cdd:PRK05771 34 EDLKEELSNERLRKLRSLLTK-LSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVE--EELEKIEKEIKELEEEIS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1121 ELNSENKKILKQKEAAE----------AKSRQESTE-KVALISEKSKLLSEIETAQADLLKITQEND-------ALRSSE 1182
Cdd:PRK05771 111 ELENEIKELEQEIERLEpwgnfdldlsLLLGFKYVSvFVGTVPEDKLEELKLESDVENVEYISTDKGyvyvvvvVLKELS 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1183 STLLQQLKELQAnkDAVDVACQKHIKEReeLEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELlqevsiLTAER 1262
Cdd:PRK05771 191 DEVEEELKKLGF--ERLELEEEGTPSEL--IREIKEELEEIEKERESLLEELKELAKKYLEELLALYEY------LEIEL 260
|
250
....*....|....*
gi 2024359618 1263 DSAQEKDLDLKSTHI 1277
Cdd:PRK05771 261 ERAEALSKFLKTDKT 275
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1585-2094 |
8.91e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 41.26 E-value: 8.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1585 EVENMKENLTVEKKARILDKESfllERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIkEKMILY 1664
Cdd:pfam05557 6 ESKARLSQLQNEKKQMELEHKR---ARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALREQA-ELNRLK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1665 KETEQLASKIEQLKSDftslsvSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLhaewkslviinEEILKEK 1744
Cdd:pfam05557 82 KKYLEALNKKLNEKES------QLADAREVISCLKNELSELRRQIQRAELELQSTNSELEEL-----------QERLDLL 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1745 EKLSKEYYKLHEkvvalleqtdadfscrllvsegKHELLLEEMSNLALKLREIERlQAQTFMQKFEADKRAEEVLQTMEK 1824
Cdd:pfam05557 145 KAKASEAEQLRQ----------------------NLEKQQSSLAEAEQRIKELEF-EIQSQEQDSEIVKNSKSELARIPE 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1825 VTKEKDAIHQEKietlASLENSRQTNEKLQNELDMLKQnNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQK-- 1902
Cdd:pfam05557 202 LEKELERLREHN----KHLNENIENKLLLKEEVEDLKR-KLEREEKYREEAATLELEKEKLEQELQSWVKLAQDTGLNlr 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1903 -----SQQLAALQEENVKLAEELG----RSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNT-------LRESTLKKEID 1966
Cdd:pfam05557 277 spedlSRRIEQLQQREIVLKEENSsltsSARQLEKARRELEQELAQYLKKIEDLNKKLKRHKalvrrlqRRVLLLTKERD 356
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 1967 EERASLQK-----SISDTSALITQKDEELEKLRNEITVLRGEnasaktLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQ 2041
Cdd:pfam05557 357 GYRAILESydkelTMSNYSPQLLERIEEAEDMTQKMQAHNEE------MEAQLSVAEEELGGYKQQAQTLERELQALRQQ 430
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 2024359618 2042 PLTVTSPSgdiaanllQDESAEDKQQEIDFLNSVIVDLQRRNEELNLKIQRMC 2094
Cdd:pfam05557 431 ESLADPSY--------SKEEVDSLRRKLETLELERQRLREQKNELEMELERRC 475
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
826-1028 |
9.36e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 39.91 E-value: 9.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 826 KLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQVMETKLKEREEREQQLTEAKVKLENDIAEIMKssg 905
Cdd:COG1579 11 DLQELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRN--- 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359618 906 dssaqlmkmNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQtaqkaeqsqqetlktHQEELKKMQDQLTDMKKQMETS 985
Cdd:COG1579 88 ---------NKEYEALQKEIESLKRRISDLEDEILELMERIEE---------------LEEELAELEAELAELEAELEEK 143
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 2024359618 986 QNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAA 1028
Cdd:COG1579 144 KAELDEELAELEAELEELEAEREELAAKIPPELLALYERIRKR 186
|
|
| |
