|
Name |
Accession |
Description |
Interval |
E-value |
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
217-281 |
5.29e-34 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 124.82 E-value: 5.29e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 971420638 217 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPRYGLFAPVHKV 281
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
61-125 |
3.42e-31 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 116.73 E-value: 3.42e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 971420638 61 VGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLRGIFTRPSKL 125
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
217-282 |
1.70e-27 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 106.52 E-value: 1.70e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 971420638 217 IGDRVLVGGT-KAGVVRFLGETDFAKGEWCGVELDEPL-GKNDGAVAGTRYFQCQPRYGLFAPVHKVT 282
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPLrGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
61-126 |
1.88e-27 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 106.13 E-value: 1.88e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 971420638 61 VGERVWVNGN-KPGFIQFLGETQFAPGQWAGIVLDEP-IGKNDGSVAGVRYFQCEPLRGIFTRPSKLS 126
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPlRGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
670-1332 |
1.31e-22 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 105.52 E-value: 1.31e-22
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 670 EEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQ-------------------EAEIKVKELDVLQAKCNEQTKLIGSLTQ 730
Cdd:TIGR02168 175 KETERKLERTRENLDRLEDI-LNELERQLKSLErqaekaerykelkaelrelELALLVLRLEELREELEELQEELKEAEE 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 731 QIRASEEKL----LDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLS 806
Cdd:TIGR02168 254 ELEELTAELqeleEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLD 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 807 AVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQ-------FALMSSELEQLKSNLTVMETKLKERE 879
Cdd:TIGR02168 334 ELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQletlrskVAQLELQIASLNNEIERLEARLERLE 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 880 EREQQLTE-----AKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAE- 953
Cdd:TIGR02168 414 DRRERLQQeieelLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDs 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 954 -QSQQETLKTHQEELKkmqdQLTDMKKQMETSQNQYKDL---QAKYEKETsemitkhDADIKGFKQNLL--DAEEALKA- 1026
Cdd:TIGR02168 494 lERLQENLEGFSEGVK----ALLKNQSGLSGILGVLSELisvDEGYEAAI-------EAALGGRLQAVVveNLNAAKKAi 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1027 -AQKKND-----------------------ELETQAEELKKQAEQAKADKRAEEVLQTMEK----VTKEKDAIHQEKI-- 1076
Cdd:TIGR02168 563 aFLKQNElgrvtflpldsikgteiqgndreILKNIEGFLGVAKDLVKFDPKLRKALSYLLGgvlvVDDLDNALELAKKlr 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1077 --ETLASLEN------------SRQTNEKLQNeldmLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKS 1142
Cdd:TIGR02168 643 pgYRIVTLDGdlvrpggvitggSAKTNSSILE----RRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLR 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1143 QQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTSALI 1222
Cdd:TIGR02168 719 KELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEEL 798
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1223 TQKDEELEKLRNEITVLRGEnasAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSGDIAANLLQDESA- 1301
Cdd:TIGR02168 799 KALREALDELRAELTLLNEE---AANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESEl 875
|
730 740 750
....*....|....*....|....*....|.
gi 971420638 1302 EDKQQEIDFLNSVIVDLQRRNEELNLKIQRM 1332
Cdd:TIGR02168 876 EALLNERASLEEALALLRSELEELSEELREL 906
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
406-1129 |
3.93e-21 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 100.90 E-value: 3.93e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 406 EMEAKMDQLRAMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLE-RKRQISEDPENVATVSE---------K 475
Cdd:TIGR02168 250 EAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEqQKQILRERLANLERQLEeleaqleelE 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 476 SRIMELERDLALRVKEVAELRGRLESSKhiDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSE---EALRK 552
Cdd:TIGR02168 330 SKLDELAEELAELEEKLEELKEELESLE--AELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNneiERLEA 407
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 553 EIKTLSASNERMGKENESLKTKLDHANKE----NSDVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTA---EFAEL 625
Cdd:TIGR02168 408 RLERLEDRRERLQQEIEELLKKLEEAELKelqaELEELEEELEELQEELERLEEALEELREELEEAEQALDAaerELAQL 487
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 626 KTQMEKVKLDYENEMSNLKLKQENEKSQH-LKEIEALKAKLLEVTEEKEQTLEnlkAKLESVEDQHLVEMEDTLNKLQEA 704
Cdd:TIGR02168 488 QARLDSLERLQENLEGFSEGVKALLKNQSgLSGILGVLSELISVDEGYEAAIE---AALGGRLQAVVVENLNAAKKAIAF 564
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 705 --EIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQL-------QAAEKQIQNLET 775
Cdd:TIGR02168 565 lkQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVlvvddldNALELAKKLRPG 644
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 776 EK---------------VGGSSKVSNLTkelQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAM 840
Cdd:TIGR02168 645 YRivtldgdlvrpggviTGGSAKTNSSI---LERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKEL 721
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 841 QETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLK 920
Cdd:TIGR02168 722 EELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKAL 801
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 921 ERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEqSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETS 1000
Cdd:TIGR02168 802 REALDELRAELTLLNEEAANLRERLESLERRIA-ATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLN 880
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1001 EMiTKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADK-----RAEEVLQT-MEKVTKEKDAIHQE 1074
Cdd:TIGR02168 881 ER-ASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLeglevRIDNLQERlSEEYSLTLEEAEAL 959
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*
gi 971420638 1075 KIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKK 1129
Cdd:TIGR02168 960 ENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLTAQKEDLTE 1014
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
530-1332 |
1.13e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 99.36 E-value: 1.13e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 530 KEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELwKSKLESAIASHQQAMEELKV 609
Cdd:TIGR02168 238 REELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANE-ISRLEQQKQILRERLANLER 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 610 SFNKGvgaqTAEFAELKTQMEKVKLDYEnemsnlklKQENEKSQHLKEIEALKAKLlevtEEKEQTLENLKAKLESVEDQ 689
Cdd:TIGR02168 317 QLEEL----EAQLEELESKLDELAEELA--------ELEEKLEELKEELESLEAEL----EELEAELEELESRLEELEEQ 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 690 HLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLdlaalqkansegKLEIQKLSEQLQAAEKQ 769
Cdd:TIGR02168 381 LETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLE------------EAELKELQAELEELEEE 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 770 IQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLkekftsavdgaENAQRAMQETINKLNQ 849
Cdd:TIGR02168 449 LEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENL-----------EGFSEGVKALLKNQSG 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 850 KEEQFALMSSELEQLKSNLTVMETKLkerEEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDelrLKERQLEQIQL 929
Cdd:TIGR02168 518 LSGILGVLSELISVDEGYEAAIEAAL---GGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDS---IKGTEIQGNDR 591
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 930 ELTKANEKAVQLQKNVEQTAQKAEQSQQ---------ETLKTHQEELKKMQDQLTDMKKQMET-----SQNQYKDLQAKY 995
Cdd:TIGR02168 592 EILKNIEGFLGVAKDLVKFDPKLRKALSyllggvlvvDDLDNALELAKKLRPGYRIVTLDGDLvrpggVITGGSAKTNSS 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 996 EKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAK-----ADKRAEEVLQTMEKVTKEKDA 1070
Cdd:TIGR02168 672 ILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSrqisaLRKDLARLEAEVEQLEERIAQ 751
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1071 IHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQ------- 1143
Cdd:TIGR02168 752 LSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRErlesler 831
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1144 QLAALQEENVKLAEELGRSRDEVT----SHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTS 1219
Cdd:TIGR02168 832 RIAATERRLEDLEEQIEELSEDIEslaaEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRS 911
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1220 ALITQKDE---ELEKLRNEITVLRGE------------NASAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAkseqpltv 1284
Cdd:TIGR02168 912 ELRRELEElreKLAQLELRLEGLEVRidnlqerlseeySLTLEEAEALENKIEDDEEEARRRLKRLENKIKE-------- 983
|
810 820 830 840
....*....|....*....|....*....|....*....|....*...
gi 971420638 1285 tspSGDIaaNLLQDESAEDKQQEIDFLNSVIVDLQRRNEELNLKIQRM 1332
Cdd:TIGR02168 984 ---LGPV--NLAAIEEYEELKERYDFLTAQKEDLTEAKETLEEAIEEI 1026
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
530-1208 |
1.95e-20 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 98.67 E-value: 1.95e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 530 KEHQREMSSLKEKFESSEEALrkeiKTLSASNERMGKENESLKTKLDHANKENSDVIELWKsKLESAIASHQQAMEELKV 609
Cdd:PTZ00121 1084 KEDNRADEATEEAFGKAEEAK----KTETGKAEEARKAEEAKKKAEDARKAEEARKAEDAR-KAEEARKAEDAKRVEIAR 1158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 610 SFNKGVGAQTAEFAELKTQMEKVKLDYEnemsnLKLKQENEKSQHLKEIEALKAKllevteEKEQTLENLKAKLESVEDQ 689
Cdd:PTZ00121 1159 KAEDARKAEEARKAEDAKKAEAARKAEE-----VRKAEELRKAEDARKAEAARKA------EEERKAEEARKAEDAKKAE 1227
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 690 HLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQ 769
Cdd:PTZ00121 1228 AVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEA 1307
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 770 IQNLETEKvggssKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLN- 848
Cdd:PTZ00121 1308 KKKAEEAK-----KADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADa 1382
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 849 -QKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLEndiaEIMKS-SGDSSAQLMKMNDELRLKERQLEQ 926
Cdd:PTZ00121 1383 aKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAE----EKKKAdEAKKKAEEAKKADEAKKKAEEAKK 1458
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 927 IQLELTKANEKavqlqKNVEQTAQKAEQSQQ-ETLKTHQEELKKMQDQLtdmkKQMETSQNQYKDLQAKYEKETSEMITK 1005
Cdd:PTZ00121 1459 AEEAKKKAEEA-----KKADEAKKKAEEAKKaDEAKKKAEEAKKKADEA----KKAAEAKKKADEAKKAEEAKKADEAKK 1529
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1006 HDADIKgfkqnlldAEEALKAAQKKNDELETQAEELKKQAEQAKAD--KRAEEVLQTMEKVTKEKDAIHQEKIETLASL- 1082
Cdd:PTZ00121 1530 AEEAKK--------ADEAKKAEEKKKADELKKAEELKKAEEKKKAEeaKKAEEDKNMALRKAEEAKKAEEARIEEVMKLy 1601
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1083 --ENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNL----ENKKVEELKKEFEALKLAAAQ----------KSQQLA 1146
Cdd:PTZ00121 1602 eeEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKkeaeEKKKAEELKKAEEENKIKAAEeakkaeedkkKAEEAK 1681
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 971420638 1147 ALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEER 1208
Cdd:PTZ00121 1682 KAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDK 1743
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
527-1275 |
3.03e-19 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 94.82 E-value: 3.03e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 527 AAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHAnKENSDVIELWKSKLESAIASHQQAMEE 606
Cdd:PTZ00121 1060 AEAKAHVGQDEGLKPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKA-EEARKAEEAKKKAEDARKAEEARKAED 1138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 607 LKvsfnKGVGAQTAEFAELKTQMEKVKLDYENEMSNlKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLE-S 685
Cdd:PTZ00121 1139 AR----KAEEARKAEDAKRVEIARKAEDARKAEEAR-KAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEErK 1213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 686 VEDQHLVEMEDTLNKLQEAEIKVKelDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQA 765
Cdd:PTZ00121 1214 AEEARKAEDAKKAEAVKKAEEAKK--DAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKK 1291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 766 AEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETIN 845
Cdd:PTZ00121 1292 ADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEK 1371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 846 KLNQKEEQFALMSSELEQLKSnltVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSgdssAQLMKMNDELRLKERQLE 925
Cdd:PTZ00121 1372 KKEEAKKKADAAKKKAEEKKK---ADEAKKKAEEDKKKADELKKAAAAKKKADEAKKK----AEEKKKADEAKKKAEEAK 1444
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 926 QIQLELTKANEKavqlqKNVEQTAQKAEQSQQ-ETLKTHQEELKKMQDqltdMKKQMETSQNQYKDLQAKYEKetsemit 1004
Cdd:PTZ00121 1445 KADEAKKKAEEA-----KKAEEAKKKAEEAKKaDEAKKKAEEAKKADE----AKKKAEEAKKKADEAKKAAEA------- 1508
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1005 KHDADikgfkqNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKAD--KRAEEVLQTME-KVTKEKDAIHQEKIETLAS 1081
Cdd:PTZ00121 1509 KKKAD------EAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADelKKAEELKKAEEkKKAEEAKKAEEDKNMALRK 1582
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1082 LENSRQTNEKLQNELDMLKQNNLKNE-EELTKSKEllnlENKKVEELKKEFEALKlaaaqKSQQLAALQEENVKLAEELg 1160
Cdd:PTZ00121 1583 AEEAKKAEEARIEEVMKLYEEEKKMKaEEAKKAEE----AKIKAEELKKAEEEKK-----KVEQLKKKEAEEKKKAEEL- 1652
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1161 RSRDEVTSHQKLEEERSVLNNQ--LLEMKKSLPSNTLRESTLKKEIDEERASLQksisdtsaliTQKDEELEKLRNEiTV 1238
Cdd:PTZ00121 1653 KKAEEENKIKAAEEAKKAEEDKkkAEEAKKAEEDEKKAAEALKKEAEEAKKAEE----------LKKKEAEEKKKAE-EL 1721
|
730 740 750
....*....|....*....|....*....|....*..
gi 971420638 1239 LRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQKLK 1275
Cdd:PTZ00121 1722 KKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKK 1758
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
601-1332 |
3.03e-19 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 94.75 E-value: 3.03e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 601 QQAMEELKVsfnkgVGAQTAEF----AELKTQMEKVKLDYENEMSNLKL---KQENEKSQHLKEIEALKAKLLEVT---E 670
Cdd:TIGR02169 173 EKALEELEE-----VEENIERLdliiDEKRQQLERLRREREKAERYQALlkeKREYEGYELLKEKEALERQKEAIErqlA 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 671 EKEQTLENLKAKLESVEDQhLVEMEDTLNKLqEAEIKVK---ELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQK 747
Cdd:TIGR02169 248 SLEEELEKLTEEISELEKR-LEEIEQLLEEL-NKKIKDLgeeEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLA 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 748 ansEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFt 827
Cdd:TIGR02169 326 ---KLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREI- 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 828 savdgaENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSS 907
Cdd:TIGR02169 402 ------NELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLK 475
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 908 AQLMKMNDELRLKERQLEQI----------------QLELTKANEKAV-----QLQKNVEQTAQKAE------------- 953
Cdd:TIGR02169 476 EEYDRVEKELSKLQRELAEAeaqaraseervrggraVEEVLKASIQGVhgtvaQLGSVGERYATAIEvaagnrlnnvvve 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 954 -----QSQQETLKTHQE------ELKKMQDQLTDMKKQMETSQNQYK----DLQAKYEKETS---------EMITKHDAD 1009
Cdd:TIGR02169 556 ddavaKEAIELLKRRKAgratflPLNKMRDERRDLSILSEDGVIGFAvdlvEFDPKYEPAFKyvfgdtlvvEDIEAARRL 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1010 IKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEvLQTMEK----VTKEKDAIHQEKIETLASLENS 1085
Cdd:TIGR02169 636 MGKYRMVTLEGELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRER-LEGLKRelssLQSELRRIENRLDELSQELSDA 714
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1086 RQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSR-D 1164
Cdd:TIGR02169 715 SRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRiP 794
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1165 EVTSH-QKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEI----------DEERASLQKSISDTSALITQKDEELEKLR 1233
Cdd:TIGR02169 795 EIQAElSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIqelqeqridlKEQIKSIEKEIENLNGKKEELEEELEELE 874
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1234 NEITVLRGEnasAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSGDIAANLLQDESAEDKQQEIDFLNS 1313
Cdd:TIGR02169 875 AALRDLESR---LGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEEL 951
|
810
....*....|....*....
gi 971420638 1314 VIVDLQRRNEELNLKIQRM 1332
Cdd:TIGR02169 952 SLEDVQAELQRVEEEIRAL 970
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
637-1291 |
2.41e-18 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 91.24 E-value: 2.41e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 637 ENEMSNLKlKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQEAEIKVK-ELDVLQ 715
Cdd:TIGR04523 39 EKKLKTIK-NELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDK-LKKNKDKINKLNSDLSKINsEIKNDK 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 716 AKCNEQTKLIGSLTQQIRASEEKL-LDLAALQKANSEgkleIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGK 794
Cdd:TIGR04523 117 EQKNKLEVELNKLEKQKKENKKNIdKFLTEIKKKEKE----LEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKI 192
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 795 EQKLLDLEKNLS---AVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLtvm 871
Cdd:TIGR04523 193 KNKLLKLELLLSnlkKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQL--- 269
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 872 ETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMK-MNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQ 950
Cdd:TIGR04523 270 SEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKeLKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKK 349
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 951 KAEQSQQETLKThQEELKKMQDQLTDMKKQmetsQNQYKDLQAKYEKETSEMITKhdadIKGFKQNLLDAEEALKAAQKK 1030
Cdd:TIGR04523 350 ELTNSESENSEK-QRELEEKQNEIEKLKKE----NQSYKQEIKNLESQINDLESK----IQNQEKLNQQKDEQIKKLQQE 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1031 NDELETQAEELK----KQAEQAKADKRAEEVLQTMEKVTKEKDAIHQEKIETL-ASLENSRQTNEKLQNELDMLKQNNLK 1105
Cdd:TIGR04523 421 KELLEKEIERLKetiiKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLsRSINKIKQNLEQKQKELKSKEKELKK 500
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1106 NEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSrdevtshqKLEEERSVLNNQLLE 1185
Cdd:TIGR04523 501 LNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKE--------NLEKEIDEKNKEIEE 572
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1186 MKKSLPSNTLRESTLKKEIDEerasLQKSISDTSALITQKDEELEKLRNEITVLRGENasaktlqsvvKTLESDKLKLEE 1265
Cdd:TIGR04523 573 LKQTQKSLKKKQEEKQELIDQ----KEKEKKDLIKEIEEKEKKISSLEKELEKAKKEN----------EKLSSIIKNIKS 638
|
650 660
....*....|....*....|....*.
gi 971420638 1266 KVKNLEQKLKAKSEQPLTVTSPSGDI 1291
Cdd:TIGR04523 639 KKNKLKQEVKQIKETIKEIRNKWPEI 664
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
357-1136 |
4.12e-18 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 90.90 E-value: 4.12e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 357 ALKEKQQHIEQ--LLAERDLERAEVAKATSHVGEIEQELAlvrdghdrhvlEMEAKMDQLRAMVEaadrEKVELLNQLEE 434
Cdd:TIGR02169 215 ALLKEKREYEGyeLLKEKEALERQKEAIERQLASLEEELE-----------KLTEEISELEKRLE----EIEQLLEELNK 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 435 E-KRKVEDLQFRVEEE-SITKGDLER-KRQISEDPENVATVSEKSRIMELERDLALRvkEVAELRGRLESSKHIDDvdts 511
Cdd:TIGR02169 280 KiKDLGEEEQLRVKEKiGELEAEIASlERSIAEKERELEDAEERLAKLEAEIDKLLA--EIEELEREIEEERKRRD---- 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 512 lSLLQEISSLQEKMAAAgkehQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELwKS 591
Cdd:TIGR02169 354 -KLTEEYAELKEELEDL----RAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADL-NA 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 592 KLESAIASHQQAMEELKVSFNKgVGAQTAEFAELKTQMEKVKLDYENEMSNLKlKQENEKSQHLKEIEALKAKL------ 665
Cdd:TIGR02169 428 AIAGIEAKINELEEEKEDKALE-IKKQEWKLEQLAADLSKYEQELYDLKEEYD-RVEKELSKLQRELAEAEAQAraseer 505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 666 -------LEVTEEKEQTLENLKAKLESVEDQHLVEMEDTL-NKLQEAeikVKELDVLQAKCNEQTKL--IGSLT-QQIRA 734
Cdd:TIGR02169 506 vrggravEEVLKASIQGVHGTVAQLGSVGERYATAIEVAAgNRLNNV---VVEDDAVAKEAIELLKRrkAGRATfLPLNK 582
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 735 SEEKLLDLAALQKANSEG-KLEIQKLSEQLQAAEKQI-------QNLETEK----------------------VGGSSKV 784
Cdd:TIGR02169 583 MRDERRDLSILSEDGVIGfAVDLVEFDPKYEPAFKYVfgdtlvvEDIEAARrlmgkyrmvtlegelfeksgamTGGSRAP 662
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 785 SNL---TKELQGKEQKLLD----LEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALM 857
Cdd:TIGR02169 663 RGGilfSRSEPAELQRLRErlegLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEEL 742
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 858 SSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDS-----SAQLMKMNDELRLKERQLEQIQLELt 932
Cdd:TIGR02169 743 EEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSripeiQAELSKLEEEVSRIEARLREIEQKL- 821
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 933 kaneKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQD----QLTDMKKQMETSQNQYKDLQAKYeketsemitkhda 1008
Cdd:TIGR02169 822 ----NRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIEnlngKKEELEEELEELEAALRDLESRL------------- 884
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1009 diKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRA-EEVLQTMEKVTKEKdaihQEKIETLASLENSRQ 1087
Cdd:TIGR02169 885 --GDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEAlEEELSEIEDPKGED----EEIPEEELSLEDVQA 958
|
810 820 830 840
....*....|....*....|....*....|....*....|....*....
gi 971420638 1088 TNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKL 1136
Cdd:TIGR02169 959 ELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILE 1007
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
354-1020 |
5.72e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 90.50 E-value: 5.72e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 354 LQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDrhvlEMEAKMDQLRAMVEAADREKVELLNQLE 433
Cdd:TIGR02168 314 LERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELE----ELEAELEELESRLEELEEQLETLRSKVA 389
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 434 EEKRKVEDLQFRVEEESITKGDLERKRQI-SEDPENVATVSEKSRIMELERDLALRVKEVAELRGRLEsskhiDDVDTSL 512
Cdd:TIGR02168 390 QLELQIASLNNEIERLEARLERLEDRRERlQQEIEELLKKLEEAELKELQAELEELEEELEELQEELE-----RLEEALE 464
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 513 SLLQEISSLQEKMAAAGKEHQREMSSLK--EKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKensdvielWK 590
Cdd:TIGR02168 465 ELREELEEAEQALDAAERELAQLQARLDslERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEG--------YE 536
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 591 SKLESAIASHQQA--MEELK-----VSFNKGVGAQTAEFAELKTqmekVKLDYENEMSNLKLKQENEKSQHLKEIEALKA 663
Cdd:TIGR02168 537 AAIEAALGGRLQAvvVENLNaakkaIAFLKQNELGRVTFLPLDS----IKGTEIQGNDREILKNIEGFLGVAKDLVKFDP 612
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 664 KL----------LEVTEEKEQTLENLKAKLES----VEDQHLV----------------------EMEDTLNKLQEAEIK 707
Cdd:TIGR02168 613 KLrkalsyllggVLVVDDLDNALELAKKLRPGyrivTLDGDLVrpggvitggsaktnssilerrrEIEELEEKIEELEEK 692
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 708 VKELDV-LQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSN 786
Cdd:TIGR02168 693 IAELEKaLAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEE 772
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 787 LTKELQGKEQKLLDLEK-------NLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSS 859
Cdd:TIGR02168 773 AEEELAEAEAEIEELEAqieqlkeELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSE 852
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 860 ELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAV 939
Cdd:TIGR02168 853 DIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLE 932
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 940 QLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDL---------QAKYEKETSEMITKHDADI 1010
Cdd:TIGR02168 933 GLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELgpvnlaaieEYEELKERYDFLTAQKEDL 1012
|
730
....*....|
gi 971420638 1011 KGFKQNLLDA 1020
Cdd:TIGR02168 1013 TEAKETLEEA 1022
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
695-1325 |
1.33e-17 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 89.23 E-value: 1.33e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 695 EDTLNKLQEAEikvKELDVLQAKCNEQTKLIGSLTQQIRA--------SEEKLLDLAALqkansegKLEIQKLSEQLQAA 766
Cdd:COG1196 175 EEAERKLEATE---ENLERLEDILGELERQLEPLERQAEKaeryrelkEELKELEAELL-------LLKLRELEAELEEL 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 767 EKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINK 846
Cdd:COG1196 245 EAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEE 324
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 847 LNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQ 926
Cdd:COG1196 325 LAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 927 IQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDmKKQMETSQNQYKDLQAKYEKETSEMITKH 1006
Cdd:COG1196 405 LEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAEL-EEEEEALLELLAELLEEAALLEAALAELL 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1007 DADIKgfkqnlLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVtkekDAIHQEKIETLASLENSR 1086
Cdd:COG1196 484 EELAE------AAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAA----YEAALEAALAAALQNIVV 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1087 QTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEV 1166
Cdd:COG1196 554 EDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLE 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1167 TSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASA 1246
Cdd:COG1196 634 AALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAE 713
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 971420638 1247 KTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQPLTvtspsgDIAANLLQDESAEDKQQEIDflnsvivDLQRRNEEL 1325
Cdd:COG1196 714 EERLEEELEEEALEEQLEAEREELLEELLEEEELLEE------EALEELPEPPDLEELERELE-------RLEREIEAL 779
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
416-1275 |
5.15e-17 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 87.43 E-value: 5.15e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 416 AMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEDPENVATVSEKSRIMELERDLALRVKEVAEL 495
Cdd:TIGR02169 163 AGVAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEKREYEGYELLKEKEALERQKEAI 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 496 RGRLES-SKHIDDVDtslsllQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTK 574
Cdd:TIGR02169 243 ERQLASlEEELEKLT------EEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERE 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 575 LDHANKENSDVIELwKSKLESAIASHQQAMEELKVSfnkgVGAQTAEFAELKTQMEKV-----KLDYENEMSNLKLKQEN 649
Cdd:TIGR02169 317 LEDAEERLAKLEAE-IDKLLAEIEELEREIEEERKR----RDKLTEEYAELKEELEDLraeleEVDKEFAETRDELKDYR 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 650 EKSQHLK----EIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHlvemedtlNKLQEaeikvkELDVLQAKCNEQTKLI 725
Cdd:TIGR02169 392 EKLEKLKreinELKRELDRLQEELQRLSEELADLNAAIAGIEAKI--------NELEE------EKEDKALEIKKQEWKL 457
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 726 GSLTQQIRASEEKLLDLAALQKANSEgklEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQG-----------K 794
Cdd:TIGR02169 458 EQLAADLSKYEQELYDLKEEYDRVEK---ELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGvhgtvaqlgsvG 534
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 795 EQKLLDLE----KNLSAVNQVKDSLEKE-LQLLKEKftsavdgaeNAQRAMQETINKLNQKEEQ-----------FALMS 858
Cdd:TIGR02169 535 ERYATAIEvaagNRLNNVVVEDDAVAKEaIELLKRR---------KAGRATFLPLNKMRDERRDlsilsedgvigFAVDL 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 859 SELEQLKSNLTVM---ETKLKEREE--REQQLTEAKVKLENDIAE--------IMKSSGDSS------AQLMKMNDELRL 919
Cdd:TIGR02169 606 VEFDPKYEPAFKYvfgDTLVVEDIEaaRRLMGKYRMVTLEGELFEksgamtggSRAPRGGILfsrsepAELQRLRERLEG 685
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 920 KERQLEQIQLELTKANEKAVQLQKNVEQTAQKAE--QSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEK 997
Cdd:TIGR02169 686 LKRELSSLQSELRRIENRLDELSQELSDASRKIGeiEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEA 765
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 998 ETSEMitkhdadikgfkqnlldaEEALKAAQKKNDELETQAEELKKQAEQAKADKrAEEVLQTMEKVTKEKDAIHQEKIE 1077
Cdd:TIGR02169 766 RIEEL------------------EEDLHKLEEALNDLEARLSHSRIPEIQAELSK-LEEEVSRIEARLREIEQKLNRLTL 826
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1078 TLASLENSRQTNEKLQNELDMLKQNNLKNEEELtkskellnleNKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAE 1157
Cdd:TIGR02169 827 EKEYLEKEIQELQEQRIDLKEQIKSIEKEIENL----------NGKKEELEEELEELEAALRDLESRLGDLKKERDELEA 896
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1158 ELGRSRDEVtshQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEEraslqKSISDTSALITQKDEELEKLRNEIT 1237
Cdd:TIGR02169 897 QLRELERKI---EELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGED-----EEIPEEELSLEDVQAELQRVEEEIR 968
|
890 900 910 920
....*....|....*....|....*....|....*....|....*....
gi 971420638 1238 VLRGENASA-----------KTLQSVVKTLESDKLKLEEKVKNLEQKLK 1275
Cdd:TIGR02169 969 ALEPVNMLAiqeyeevlkrlDELKEKRAKLEEERKAILERIEEYEKKKR 1017
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
628-1352 |
7.35e-17 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 87.12 E-value: 7.35e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 628 QMEKVKLDY-ENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEI 706
Cdd:PTZ00121 1068 QDEGLKPSYkDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARK 1147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 707 KVKELDVLQAKcneqtkligsltqqiRASEEKLLDLAalQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSN 786
Cdd:PTZ00121 1148 AEDAKRVEIAR---------------KAEDARKAEEA--RKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEE 1210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 787 ltkELQGKEQKLLDLEKNLSAVNQVKDSLEKElqllkekftsavdgaENAQRAMQETINKLNQKEEQFALMSSELEQL-- 864
Cdd:PTZ00121 1211 ---ERKAEEARKAEDAKKAEAVKKAEEAKKDA---------------EEAKKAEEERNNEEIRKFEEARMAHFARRQAai 1272
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 865 --KSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQ 942
Cdd:PTZ00121 1273 kaEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEA 1352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 943 KNVEQTAQKAEQsQQETLKTHQEELKKMQDQLTdmKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEE 1022
Cdd:PTZ00121 1353 EAAADEAEAAEE-KAEAAEKKKEEAKKKADAAK--KKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEE 1429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1023 ALKAAQ-KKNDELETQAEELKKQAEQAKadkRAEEVLQTMEKVTKEKDAihQEKIETLASLENSRQTNEKLQNELDMLKq 1101
Cdd:PTZ00121 1430 KKKADEaKKKAEEAKKADEAKKKAEEAK---KAEEAKKKAEEAKKADEA--KKKAEEAKKADEAKKKAEEAKKKADEAK- 1503
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1102 nnlKNEEELTKSKELlnlenKKVEELKKEFEALKLAAAQKSQQLAalQEENVKLAEELgRSRDEVtshQKLEEERSVLNN 1181
Cdd:PTZ00121 1504 ---KAAEAKKKADEA-----KKAEEAKKADEAKKAEEAKKADEAK--KAEEKKKADEL-KKAEEL---KKAEEKKKAEEA 1569
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1182 QLLEMKKSLpsnTLRESTLKKEIDEER-ASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLESDK 1260
Cdd:PTZ00121 1570 KKAEEDKNM---ALRKAEEAKKAEEARiEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEK 1646
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1261 LKLEEkVKNLEQKLKAKSEQPLTVTSPSGDIAANLLQDESAEDKQQEIDFLNSvivDLQRRNEELNLKIQRMCEAALNGN 1340
Cdd:PTZ00121 1647 KKAEE-LKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEA---EEAKKAEELKKKEAEEKKKAEELK 1722
|
730
....*....|..
gi 971420638 1341 EEETINYDSEEE 1352
Cdd:PTZ00121 1723 KAEEENKIKAEE 1734
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
423-1280 |
2.83e-16 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 85.02 E-value: 2.83e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 423 REKVELLNQLEEEKRKVEDLqfrvEEESITKGDLERKRQISEDPENVATVSEKSRIMELERDLALRVKEVAELRGRLESS 502
Cdd:pfam02463 166 RLKRKKKEALKKLIEETENL----AELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDL 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 503 KHiddvDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEkfESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKEN 582
Cdd:pfam02463 242 LQ----ELLRDEQEEIESSKQEIEKEEEKLAQVLKENKE--EEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEK 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 583 SDVIELWKSKLESAIASHQQAMEELKVSfNKGVGAQTAEFAELKTQMEKVKLDYENEMSNLKLKQEnEKSQHLKEIEALK 662
Cdd:pfam02463 316 LKESEKEKKKAEKELKKEKEEIEELEKE-LKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKK-LESERLSSAAKLK 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 663 AKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEiKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDL 742
Cdd:pfam02463 394 EEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEE-ESIELKQGKLTEEKEELEKQELKLLKDELELKKSED 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 743 AALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLL 822
Cdd:pfam02463 473 LLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVE 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 823 KEKFTSAVDGAENAQRAMQETINKLNQKEEqfalmssELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKS 902
Cdd:pfam02463 553 VSATADEVEERQKLVRALTELPLGARKLRL-------LIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVV 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 903 SGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKkmqdqltdmKKQME 982
Cdd:pfam02463 626 EGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAK---------EEILR 696
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 983 TSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTM- 1061
Cdd:pfam02463 697 RQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKEl 776
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1062 --EKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAA 1139
Cdd:pfam02463 777 aeEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEEL 856
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1140 QKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTS 1219
Cdd:pfam02463 857 ERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEE 936
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 971420638 1220 ALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQ 1280
Cdd:pfam02463 937 PEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEK 997
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
354-1134 |
4.63e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 84.35 E-value: 4.63e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 354 LQEALKEKQQHIEQLLAERD--------LERAEVAKATSHVGEIEQELALVRDGhDRHVLEMEAKMDQLRAMVEAADREK 425
Cdd:TIGR02169 189 LDLIIDEKRQQLERLRREREkaeryqalLKEKREYEGYELLKEKEALERQKEAI-ERQLASLEEELEKLTEEISELEKRL 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 426 VELLNQLEEEKRKVEDL----QFRVEEE-SITKGDLER-KRQISEDPENVATVSEKSRIMELERDLALRvkEVAELRGRL 499
Cdd:TIGR02169 268 EEIEQLLEELNKKIKDLgeeeQLRVKEKiGELEAEIASlERSIAEKERELEDAEERLAKLEAEIDKLLA--EIEELEREI 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 500 ESSKHIDDvdtslSLLQEISSLQEKMAAAgkehQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHAN 579
Cdd:TIGR02169 346 EEERKRRD-----KLTEEYAELKEELEDL----RAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQ 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 580 KENSDVIELwKSKLESAIASHQQAMEELKVSFNKgVGAQTAEFAELKTQMEKVKLDYENEMSNLKlKQENEKSQHLKEIE 659
Cdd:TIGR02169 417 RLSEELADL-NAAIAGIEAKINELEEEKEDKALE-IKKQEWKLEQLAADLSKYEQELYDLKEEYD-RVEKELSKLQRELA 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 660 ALKAKL-------------LEVTEEKEQTLENLKAKLESVEDQHLVEMEDTL-NKLQEAeikVKELDVLQAKCNEQTKL- 724
Cdd:TIGR02169 494 EAEAQAraseervrggravEEVLKASIQGVHGTVAQLGSVGERYATAIEVAAgNRLNNV---VVEDDAVAKEAIELLKRr 570
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 725 -IGSLT-QQIRASEEKLLDLAALQKANSEG-KLEIQKLSEQLQAAEKQI-------QNLETEK----------------- 777
Cdd:TIGR02169 571 kAGRATfLPLNKMRDERRDLSILSEDGVIGfAVDLVEFDPKYEPAFKYVfgdtlvvEDIEAARrlmgkyrmvtlegelfe 650
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 778 -----VGGSSKVSNL---TKELQGKEQKLLD----LEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETIN 845
Cdd:TIGR02169 651 ksgamTGGSRAPRGGilfSRSEPAELQRLRErlegLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQ 730
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 846 KLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDS-----SAQLMKMNDELRLK 920
Cdd:TIGR02169 731 EEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSripeiQAELSKLEEEVSRI 810
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 921 ERQLEQIQLELtkaneKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQD----QLTDMKKQMETSQNQYKDLQAKYE 996
Cdd:TIGR02169 811 EARLREIEQKL-----NRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIEnlngKKEELEEELEELEAALRDLESRLG 885
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 997 KETSEmITKHDADIKGFKQNLLDAEEALKAAQKKNDEL----ETQAEELKKQAEQAKADKRAEEVLQTMEKVTKEKDAIh 1072
Cdd:TIGR02169 886 DLKKE-RDELEAQLRELERKIEELEAQIEKKRKRLSELkaklEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQRV- 963
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 971420638 1073 QEKIETLASLEN-SRQTNEKLQNELDMLKQNNLKNEEELTKSKELL-NLENKKVEELKKEFEAL 1134
Cdd:TIGR02169 964 EEEIRALEPVNMlAIQEYEEVLKRLDELKEKRAKLEEERKAILERIeEYEKKKREVFMEAFEAI 1027
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
624-1280 |
2.71e-15 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 81.55 E-value: 2.71e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 624 ELKTQMEKVKLDYENEMSNLKlKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEME--DTLNKL 701
Cdd:TIGR00618 191 SLHGKAELLTLRSQLLTLCTP-CMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQLlkQLRARI 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 702 QEAEIKVKELDVLQ-------------------AKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQ 762
Cdd:TIGR00618 270 EELRAQEAVLEETQerinrarkaaplaahikavTQIEQQAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQT 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 763 LQAAEKQIQNlETEKVGGSSKVSNLTKELqgkEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKfTSAVDGAENAQRAMQE 842
Cdd:TIGR00618 350 LHSQEIHIRD-AHEVATSIREISCQQHTL---TQHIHTLQQQKTTLTQKLQSLCKELDILQRE-QATIDTRTSAFRDLQG 424
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 843 TINKLnQKEEQFALMSSELEQLKSNLTVMETKLKEREERE-QQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKE 921
Cdd:TIGR00618 425 QLAHA-KKQQELQQRYAELCAAAITCTAQCEKLEKIHLQEsAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEP 503
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 922 RQLEQIQLELtkanEKAVQLQKNVEQTAQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSe 1001
Cdd:TIGR00618 504 CPLCGSCIHP----NPARQDIDNPGPLTRRMQRGEQT-YAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQ- 577
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1002 MITKHDADIKGFKQNLLDAEEALKAAQKKNDEL--ETQAEELKKQAEQAKADKRAEEvLQTMEKVTKEKDAIHQ------ 1073
Cdd:TIGR00618 578 CDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLacEQHALLRKLQPEQDLQDVRLHL-QQCSQELALKLTALHAlqltlt 656
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1074 ---EKIETLASLENSRQTNEKLQNELDML---KQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAA 1147
Cdd:TIGR00618 657 qerVREHALSIRVLPKELLASRQLALQKMqseKEQLTYWKEMLAQCQTLLRELETHIEEYDREFNEIENASSSLGSDLAA 736
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1148 LQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKeidEERASLQKSISDTSALITQK-- 1225
Cdd:TIGR00618 737 REDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFN---RLREEDTHLLKTLEAEIGQEip 813
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 971420638 1226 DEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQ 1280
Cdd:TIGR00618 814 SDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQ 868
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
353-983 |
1.06e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 79.60 E-value: 1.06e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 353 ALQEALKEKQqhIEQLLAERDLERAEVAKATSHVGEIEQELAlvrdghdrhvlemeakmdQLRAMVEAADREKVELLNQL 432
Cdd:COG1196 217 ELKEELKELE--AELLLLKLRELEAELEELEAELEELEAELE------------------ELEAELAELEAELEELRLEL 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 433 EEEKRKVEDLQFRVEEESITKGDLERKRQisedpenvatvSEKSRIMELERDLALRVKEVAELRGRLEsskhiddvdtsl 512
Cdd:COG1196 277 EELELELEEAQAEEYELLAELARLEQDIA-----------RLEERRRELEERLEELEEELAELEEELE------------ 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 513 SLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELwkSK 592
Cdd:COG1196 334 ELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAE--EA 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 593 LESAIASHQQAMEELKVSfnkgvgAQTAEFAELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEK 672
Cdd:COG1196 412 LLERLERLEEELEELEEA------LAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEE 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 673 EQTLENLKAKLESVEDQHLVEMEDTLNKLQEA-------EIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAAL 745
Cdd:COG1196 486 LAEAAARLLLLLEAEADYEGFLEGVKAALLLAglrglagAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEY 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 746 QKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDS----LEKELQL 821
Cdd:COG1196 566 LKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAARLEAalrrAVTLAGR 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 822 LKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMK 901
Cdd:COG1196 646 LREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEA 725
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 902 SSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQK----------AEQSQQETlkthQEELKKMQ 971
Cdd:COG1196 726 LEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREiealgpvnllAIEEYEEL----EERYDFLS 801
|
650
....*....|..
gi 971420638 972 DQLTDMKKQMET 983
Cdd:COG1196 802 EQREDLEEARET 813
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
720-1275 |
1.15e-14 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 79.34 E-value: 1.15e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 720 EQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLL 799
Cdd:PRK03918 197 EKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIE 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 800 DLEKNLSAVNQVKDSLEK--ELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKE 877
Cdd:PRK03918 277 ELEEKVKELKELKEKAEEyiKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEERLEELKKKLKELEKRLEE 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 878 REEREQQLTEAKVKLENdIAEIMKSSGDSSAQlmKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQtaqkaeqsqq 957
Cdd:PRK03918 357 LEERHELYEEAKAKKEE-LERLKKRLTGLTPE--KLEKELEELEKAKEEIEEEISKITARIGELKKEIKE---------- 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 958 etLKTHQEELKKMQDQLTDMKKQMEtsqnqykdlqakyEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETq 1037
Cdd:PRK03918 424 --LKKAIEELKKAKGKCPVCGRELT-------------EEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELRELEK- 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1038 aeELKKQAEQAKADKRAEEVLQTMEKVTKekdaIHQEKIETLAS-LENSRQTNEKLQNELDMLKQnNLKNEEELTKSKEL 1116
Cdd:PRK03918 488 --VLKKESELIKLKELAEQLKELEEKLKK----YNLEELEKKAEeYEKLKEKLIKLKGEIKSLKK-ELEKLEELKKKLAE 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1117 LNLENKKVEELKKEFEA-LKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTL 1195
Cdd:PRK03918 561 LEKKLDELEEELAELLKeLEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEK 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1196 RESTLKKEIDEerasLQKSISdtsalitqkDEELEKLRNEITVLRGENASA----KTLQSVVKTLESDKLKLEEKVKNLE 1271
Cdd:PRK03918 641 RLEELRKELEE----LEKKYS---------EEEYEELREEYLELSRELAGLraelEELEKRREEIKKTLEKLKEELEERE 707
|
....
gi 971420638 1272 QKLK 1275
Cdd:PRK03918 708 KAKK 711
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
630-1131 |
1.27e-14 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 79.29 E-value: 1.27e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 630 EKVKLDYENEmsnlKLKQENEKSQHLKEIEALKAKLLEvteeKEQTLENLKAKlesveDQHLVEMEDTLNKLQEAEIKVK 709
Cdd:TIGR04523 165 KKQKEELENE----LNLLEKEKLNIQKNIDKIKNKLLK----LELLLSNLKKK-----IQKNKSLESQISELKKQNNQLK 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 710 E-LDVLQAKCNEQTKLIGSLTQQI-RASEEKLLDLAALQKANSE---GKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKv 784
Cdd:TIGR04523 232 DnIEKKQQEINEKTTEISNTQTQLnQLKDEQNKIKKQLSEKQKEleqNNKKIKELEKQLNQLKSEISDLNNQKEQDWNK- 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 785 sNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQL 864
Cdd:TIGR04523 311 -ELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNL 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 865 KSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKN 944
Cdd:TIGR04523 390 ESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQ 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 945 VEQTAQKAEQSQQeTLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKyEKETSEMITKHDADIKGFKQNLLDAEEAL 1024
Cdd:TIGR04523 470 LKVLSRSINKIKQ-NLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKK-ISSLKEKIEKLESEKKEKESKISDLEDEL 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1025 KA--AQKKNDELETQAEELKKQAEQAKADKRAEEVLQtmEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQN 1102
Cdd:TIGR04523 548 NKddFELKKENLEKEIDEKNKEIEELKQTQKSLKKKQ--EEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKE 625
|
490 500
....*....|....*....|....*....
gi 971420638 1103 NLKNEEELTKSKELLNLENKKVEELKKEF 1131
Cdd:TIGR04523 626 NEKLSSIIKNIKSKKNKLKQEVKQIKETI 654
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
336-1332 |
1.91e-14 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 78.68 E-value: 1.91e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 336 LLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERA-------EVAKATSHVGEIEQELALVRDGHDRHVLEME 408
Cdd:pfam01576 76 ILHELESRLEEEEERSQQLQNEKKKMQQHIQDLEEQLDEEEAarqklqlEKVTTEAKIKKLEEDILLLEDQNSKLSKERK 155
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 409 AKMDQLRAMVE--AADREKVELLNQLEEEKRKV-EDLQFRVEEESITKGDLERKRQISEdpenvatvsekSRIMELERDL 485
Cdd:pfam01576 156 LLEERISEFTSnlAEEEEKAKSLSKLKNKHEAMiSDLEERLKKEEKGRQELEKAKRKLE-----------GESTDLQEQI 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 486 ALRVKEVAELRGRLesSKHIDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTlsasNERMG 565
Cdd:pfam01576 225 AELQAQIAELRAQL--AKKEEELQAALARLEEETAQKNNALKKIRELEAQISELQEDLESERAARNKAEKQ----RRDLG 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 566 KENESLKTKLDHANKENSDVIELwKSKLESAIASHQQAMEELKVSFNKGVG----AQTAEFAELKTQMEKVKldyENEMS 641
Cdd:pfam01576 299 EELEALKTELEDTLDTTAAQQEL-RSKREQEVTELKKALEEETRSHEAQLQemrqKHTQALEELTEQLEQAK---RNKAN 374
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 642 NLKLKQ--ENEKSQHLKEIEALKAKLLEVTEEK---EQTLENLKAKLESVEDQHlVEMEDTLNKLQ-EAEIKVKELDVLQ 715
Cdd:pfam01576 375 LEKAKQalESENAELQAELRTLQQAKQDSEHKRkklEGQLQELQARLSESERQR-AELAEKLSKLQsELESVSSLLNEAE 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 716 AKCNEQTKLIGSLTQQIRASEEKLldlaalqkansegkleiQKLSEQLQAAEKQIQNLETEKvggsskvSNLTKELQGKE 795
Cdd:pfam01576 454 GKNIKLSKDVSSLESQLQDTQELL-----------------QEETRQKLNLSTRLRQLEDER-------NSLQEQLEEEE 509
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 796 QKLLDLEKNLSAVNQVKDSLEKELqllkEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKL 875
Cdd:pfam01576 510 EAKRNVERQLSTLQAQLSDMKKKL----EEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDL 585
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 876 KEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTaQKAEQS 955
Cdd:pfam01576 586 LVDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEERDRAEAEAREKETRALSLARALEEALEAKEELERT-NKQLRA 664
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 956 QQETLKTHQEELKK-----------MQDQLTDMKKQMETSQNQYK---DLQAKYEKETSEMITKHDADIKGFKQNlldAE 1021
Cdd:pfam01576 665 EMEDLVSSKDDVGKnvhelerskraLEQQVEEMKTQLEELEDELQateDAKLRLEVNMQALKAQFERDLQARDEQ---GE 741
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1022 EALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVlqTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKq 1101
Cdd:pfam01576 742 EKRRQLVKQVRELEAELEDERKQRAQAVAAKKKLEL--DLKELEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEAR- 818
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1102 nnLKNEEELTKSKEllnlENKKVEELKKEFEALK--LAAAQKSQQLAalQEENVKLAEELGRSRDEVTSHQ--------- 1170
Cdd:pfam01576 819 --ASRDEILAQSKE----SEKKLKNLEAELLQLQedLAASERARRQA--QQERDELADEIASGASGKSALQdekrrlear 890
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1171 --KLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEitvlrgENASAKT 1248
Cdd:pfam01576 891 iaQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKLQEM------EGTVKSK 964
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1249 LQSVVKTLESDKLKLEEKvknLEQKLKAKSEQPLTVTSPSGDIAANLLQDES----AEDKQQEIDFLNSVIVDLQRRNEE 1324
Cdd:pfam01576 965 FKSSIAALEAKIAQLEEQ---LEQESRERQAANKLVRRTEKKLKEVLLQVEDerrhADQYKDQAEKGNSRMKQLKRQLEE 1041
|
....*...
gi 971420638 1325 LNLKIQRM 1332
Cdd:pfam01576 1042 AEEEASRA 1049
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
356-901 |
3.69e-14 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 77.80 E-value: 3.69e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 356 EALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAkmdqLRAMVEAADREKVELLNQLEEE 435
Cdd:PRK03918 182 EKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEE----LKEEIEELEKELESLEGSKRKL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 436 KRKVEDLQFRVEEESITKGDLERKRQISEDPENVATvsEKSRIMELERDLALRVKEVAELRGRLESskHIDDVDTSLSLL 515
Cdd:PRK03918 258 EEKIRELEERIEELKKEIEELEEKVKELKELKEKAE--EYIKLSEFYEEYLDELREIEKRLSRLEE--EINGIEERIKEL 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 516 QEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDvIELWKSKLES 595
Cdd:PRK03918 334 EEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEE-IEEEISKITA 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 596 AIASHQQAMEELKVSFNKgvgaqtAEFAELKTQMEKVKLDYENEmsnlklkqENEKSQHLKEIEALKAKLLEvTEEKEQT 675
Cdd:PRK03918 413 RIGELKKEIKELKKAIEE------LKKAKGKCPVCGRELTEEHR--------KELLEEYTAELKRIEKELKE-IEEKERK 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 676 LENLKAKLESV--EDQHLVEMEDTLNKLQEAEIKVKELDV--LQAKCNEQTKL---IGSLTQQIRASEEKLLDLAALQKA 748
Cdd:PRK03918 478 LRKELRELEKVlkKESELIKLKELAEQLKELEEKLKKYNLeeLEKKAEEYEKLkekLIKLKGEIKSLKKELEKLEELKKK 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 749 NSEGKLEIQKLSEQLQAAEKQIQNLETEKVggsSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTS 828
Cdd:PRK03918 558 LAELEKKLDELEEELAELLKELEELGFESV---EELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEE 634
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 971420638 829 aVDGAENAQRAMQETINKLNQK--EEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMK 901
Cdd:PRK03918 635 -LAETEKRLEELRKELEELEKKysEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREK 708
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
358-971 |
4.27e-14 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 77.85 E-value: 4.27e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 358 LKEKQQHIEQLLAERDLE----RAEVAKATSHVGEIEQELALVRDG-------HDRHVLEMEAKMDQLRAMVEAADREKV 426
Cdd:pfam15921 262 LQQHQDRIEQLISEHEVEitglTEKASSARSQANSIQSQLEIIQEQarnqnsmYMRQLSDLESTVSQLRSELREAKRMYE 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 427 ELLNQLEEekrkvedlQFRVEEESITKGDLERKrQISEDPENVatvseKSRIMELERDLALRVKEVAELRgrlESSKHID 506
Cdd:pfam15921 342 DKIEELEK--------QLVLANSELTEARTERD-QFSQESGNL-----DDQLQKLLADLHKREKELSLEK---EQNKRLW 404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 507 DVDTSLSLlqEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENeSLKTKLDHANKENSDVI 586
Cdd:pfam15921 405 DRDTGNSI--TIDHLRRELDDRNMEVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVS-SLTAQLESTKEMLRKVV 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 587 ELWKSKlESAIASHQQAMEELKVSFN---KGVGAQTAEFAELKTQMEkvkldyenemsnLKLKQenekSQHLKeiealka 663
Cdd:pfam15921 482 EELTAK-KMTLESSERTVSDLTASLQekeRAIEATNAEITKLRSRVD------------LKLQE----LQHLK------- 537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 664 kllevteEKEQTLENLKAKLESVedqhlvemedtlnKLQEAEiKVKELDVLQAKCNEQTKLIGsltQQIRASEEKLLDLA 743
Cdd:pfam15921 538 -------NEGDHLRNVQTECEAL-------------KLQMAE-KDKVIEILRQQIENMTQLVG---QHGRTAGAMQVEKA 593
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 744 ALQKANSEGKLEIQKLS-------EQLQAAEKQIQNLETEKV----GGSSKVSNLTKELQGKEQKLLDLEKNLSAVNqvk 812
Cdd:pfam15921 594 QLEKEINDRRLELQEFKilkdkkdAKIRELEARVSDLELEKVklvnAGSERLRAVKDIKQERDQLLNEVKTSRNELN--- 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 813 dSLEKELQLLKEKFTSAVDGAE-----------NAQRAMQETINKLNQKE--------------EQFALMSSELEQLKSN 867
Cdd:pfam15921 671 -SLSEDYEVLKRNFRNKSEEMEtttnklkmqlkSAQSELEQTRNTLKSMEgsdghamkvamgmqKQITAKRGQIDALQSK 749
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 868 LTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLmkmnDELRLKERQLEQIQLELTKANEKAVQLQKNVEQ 947
Cdd:pfam15921 750 IQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGEL----EVLRSQERRLKEKVANMEVALDKASLQFAECQD 825
|
650 660
....*....|....*....|....
gi 971420638 948 TAQKAEQSQQETLKTHQEELKKMQ 971
Cdd:pfam15921 826 IIQRQEQESVRLKLQHTLDVKELQ 849
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
567-1280 |
5.58e-14 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 77.07 E-value: 5.58e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 567 ENESLKTKLDHANKENSDVIELWKSKLESAIASHQQAMEELKvsfnKGVGAQTAEFAELKTQMEKVKLDYENEMS-NLKL 645
Cdd:pfam05483 71 ENSEGLSRLYSKLYKEAEKIKKWKVSIEAELKQKENKLQENR----KIIEAQRKAIQELQFENEKVSLKLEEEIQeNKDL 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 646 KQENEKSQH----LKEIEALKAKLLEVTE-EKEQT----------LENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKE 710
Cdd:pfam05483 147 IKENNATRHlcnlLKETCARSAEKTKKYEyEREETrqvymdlnnnIEKMILAFEELRVQAENARLEMHFKLKEDHEKIQH 226
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 711 LDV-LQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKansEGKLEIQKLSEQLQAAEKQIQNLETEKvggsskvSNLTK 789
Cdd:pfam05483 227 LEEeYKKEINDKEKQVSLLLIQITEKENKMKDLTFLLE---ESRDKANQLEEKTKLQDENLKELIEKK-------DHLTK 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 790 ELQgkeqkllDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENaqramqeTINKLNQKEEQFALMSSELEQLKSNLT 869
Cdd:pfam05483 297 ELE-------DIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEA-------QMEELNKAKAAHSFVVTEFEATTCSLE 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 870 -VMETKLKEREEREQQLTEAKVKLENdiaeimkssgdSSAQLMKMNDELRLKERQLEQIQLELTKaNEKAVQLQKNVEQT 948
Cdd:pfam05483 363 eLLRTEQQRLEKNEDQLKIITMELQK-----------KSSELEEMTKFKNNKEVELEELKKILAE-DEKLLDEKKQFEKI 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 949 AQKAEQSQQET---LKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKE---TSEMITKHDA---DIKGFKQNLLD 1019
Cdd:pfam05483 431 AEELKGKEQELiflLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEklkNIELTAHCDKlllENKELTQEASD 510
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1020 AEEALKAAQKKNDELETQAEELKKQAEQAKadkraEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDML 1099
Cdd:pfam05483 511 MTLELKKHQEDIINCKKQEERMLKQIENLE-----EKEMNLRDELESVREEFIQKGDEVKCKLDKSEENARSIEYEVLKK 585
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1100 KQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDE----VTSHQKLEEE 1175
Cdd:pfam05483 586 EKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKfeeiIDNYQKEIED 665
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1176 RSVLNNQLLEMKKSLPSNTLRESTLKKEIDEErasLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVK- 1254
Cdd:pfam05483 666 KKISEEKLLEEVEKAKAIADEAVKLQKEIDKR---CQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKNKEQEQSSAKa 742
|
730 740
....*....|....*....|....*.
gi 971420638 1255 TLESDKLKLEEKVKNLEQKLKAKSEQ 1280
Cdd:pfam05483 743 ALEIELSNIKAELLSLKKQLEIEKEE 768
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
692-1361 |
6.62e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 77.03 E-value: 6.62e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 692 VEMEDTLNKLQEAEIKVKELDVLQAKCNEQTkligsltQQIRASEEKLLDLAALQKanSEGKLEIQKLSEQLQAAEKQIQ 771
Cdd:TIGR02169 170 RKKEKALEELEEVEENIERLDLIIDEKRQQL-------ERLRREREKAERYQALLK--EKREYEGYELLKEKEALERQKE 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 772 NLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVN-QVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQK 850
Cdd:TIGR02169 241 AIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNkKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDA 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 851 EEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEA-------KVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQ 923
Cdd:TIGR02169 321 EERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEyaelkeeLEDLRAELEEVDKEFAETRDELKDYREKLEKLKRE 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 924 LEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQ------QETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEK 997
Cdd:TIGR02169 401 INELKRELDRLQEELQRLSEELADLNAAIAGIEakinelEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDR 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 998 ETSEmitkhdadIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQ--------AEQAKADKRAEEVLQT-----MEKV 1064
Cdd:TIGR02169 481 VEKE--------LSKLQRELAEAEAQARASEERVRGGRAVEEVLKASiqgvhgtvAQLGSVGERYATAIEVaagnrLNNV 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1065 TKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEE-LTKSKELLNLENKKVEELKKEFEALKLAAAQKSQ 1143
Cdd:TIGR02169 553 VVEDDAVAKEAIELLKRRKAGRATFLPLNKMRDERRDLSILSEDGvIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDIEAA 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1144 QLAALQEENVKLAEEL-------------GRSRDEVTSHQKLEEERsvLNNQLLEMKKSLPSNTLRESTLKKEIDEERAS 1210
Cdd:TIGR02169 633 RRLMGKYRMVTLEGELfeksgamtggsraPRGGILFSRSEPAELQR--LRERLEGLKRELSSLQSELRRIENRLDELSQE 710
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1211 L---QKSISDTSALITQKDEELEKLRNEITVLR-----------GENASAKTLQSVVKTLESDKLKLEEKVKNLEQKL-- 1274
Cdd:TIGR02169 711 LsdaSRKIGEIEKEIEQLEQEEEKLKERLEELEedlssleqeieNVKSELKELEARIEELEEDLHKLEEALNDLEARLsh 790
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1275 --------------KAKSEQPLTVTSPSGDIAANLLQDESAEDK----QQEIDFLNSVIVDLQRRNEELNLKIQRMcEAA 1336
Cdd:TIGR02169 791 sripeiqaelskleEEVSRIEARLREIEQKLNRLTLEKEYLEKEiqelQEQRIDLKEQIKSIEKEIENLNGKKEEL-EEE 869
|
730 740
....*....|....*....|....*
gi 971420638 1337 LNGNEEETINYDSEEEGLSKKTPRL 1361
Cdd:TIGR02169 870 LEELEAALRDLESRLGDLKKERDEL 894
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
345-1112 |
7.28e-14 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 77.10 E-value: 7.28e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 345 ARKISGTTALQEALKE-----KQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlvRDGHDRHVLEMEAKMDQLRamvE 419
Cdd:PTZ00121 1223 AKKAEAVKKAEEAKKDaeeakKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEA--RKADELKKAEEKKKADEAK---K 1297
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 420 AADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEDPENVATVSEKSRIMELERdlALRVKEVAELRgRL 499
Cdd:PTZ00121 1298 AEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEA--AEEKAEAAEKK-KE 1374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 500 ESSKHIDDVDTSLSLLQEISSLQEKmaaaGKEHQREMSSLKEKFESSEEA--LRKEIKTLSASNERMGKENESLKTKLDH 577
Cdd:PTZ00121 1375 EAKKKADAAKKKAEEKKKADEAKKK----AEEDKKKADELKKAAAAKKKAdeAKKKAEEKKKADEAKKKAEEAKKADEAK 1450
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 578 ANKENSDVIELWKSKLESAiashqQAMEELKvsfNKGVGAQTAEFAELKTQMEKVKLDYENEMSNLKLKQENEKsqhlKE 657
Cdd:PTZ00121 1451 KKAEEAKKAEEAKKKAEEA-----KKADEAK---KKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAK----KA 1518
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 658 IEALKAKLLEVTEEKEQTLENLKAKlesvedqhLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQI--RAS 735
Cdd:PTZ00121 1519 EEAKKADEAKKAEEAKKADEAKKAE--------EKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEakKAE 1590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 736 EEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKvggsSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSL 815
Cdd:PTZ00121 1591 EARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEK----KKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEE 1666
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 816 EKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSnltvMETKLKEREEREQQLTEAKVKLEND 895
Cdd:PTZ00121 1667 AKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKK----AEELKKAEEENKIKAEEAKKEAEED 1742
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 896 iaeimkssgdssaqlMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQkaEQSQQETLKTHQEELKKMQDQLT 975
Cdd:PTZ00121 1743 ---------------KKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIE--EELDEEDEKRRMEVDKKIKDIFD 1805
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 976 DMKKQMETsqNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKaAQKKNDELETQAEELKKQAEQAKADKRAE 1055
Cdd:PTZ00121 1806 NFANIIEG--GKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKHK-FNKNNENGEDGNKEADFNKEKDLKEDDEE 1882
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*..
gi 971420638 1056 EVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNElDMLKQNNLKNEEELTK 1112
Cdd:PTZ00121 1883 EIEEADEIEKIDKDDIEREIPNNNMAGKNNDIIDDKLDKD-EYIKRDAEETREEIIK 1938
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
481-1280 |
2.99e-13 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 75.15 E-value: 2.99e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 481 LERDLALRVKEVAELRGRLESSKHIDDvDTSLSLLQEISSLQEKMAAAGKEHQrEMSSLKEKFESSEEALRKEIKTLSas 560
Cdd:pfam15921 76 IERVLEEYSHQVKDLQRRLNESNELHE-KQKFYLRQSVIDLQTKLQEMQMERD-AMADIRRRESQSQEDLRNQLQNTV-- 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 561 nermgKENESLKT-KLDHANKENSDVIELWKSKLesaiaSHQQAMEELK---VSFNKGVGAQ--------TAEFAELKTQ 628
Cdd:pfam15921 152 -----HELEAAKClKEDMLEDSNTQIEQLRKMML-----SHEGVLQEIRsilVDFEEASGKKiyehdsmsTMHFRSLGSA 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 629 MEKVKLDYENEMSNLKLKQENEKSQhlkeIEALKAkllEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKV 708
Cdd:pfam15921 222 ISKILRELDTEISYLKGRIFPVEDQ----LEALKS---ESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 709 K----ELDVLQAKCNEQTKLIGSLTQQIRASEEKLLdlAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKV 784
Cdd:pfam15921 295 NsiqsQLEIIQEQARNQNSMYMRQLSDLESTVSQLR--SELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQES 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 785 SNLTKELQgkeQKLLDLEKNlsavnqvkdslEKELQLLKEKFTSAVDgaenaqRAMQETINkLNQKEEQFALMSSELEQL 864
Cdd:pfam15921 373 GNLDDQLQ---KLLADLHKR-----------EKELSLEKEQNKRLWD------RDTGNSIT-IDHLRRELDDRNMEVQRL 431
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 865 KSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKN 944
Cdd:pfam15921 432 EALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERA 511
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 945 VEQTAQKAEQ---------SQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETsEMITKHdadikGFKQ 1015
Cdd:pfam15921 512 IEATNAEITKlrsrvdlklQELQHLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMT-QLVGQH-----GRTA 585
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1016 NLLDAEEALKAAQKKNDELETQAEELKKQaeqaKADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNE 1095
Cdd:pfam15921 586 GAMQVEKAQLEKEINDRRLELQEFKILKD----KKDAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNE 661
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1096 LDMLKQ--NNLKNEEELTKSkellNLENKKvEELKKEFEALKLaaaqksqQLAALQEEnvklaeelgrsrdevtshqkLE 1173
Cdd:pfam15921 662 VKTSRNelNSLSEDYEVLKR----NFRNKS-EEMETTTNKLKM-------QLKSAQSE--------------------LE 709
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1174 EERsvlnNQLLEMKKSLPSNTLRESTLKKEIDEERA---SLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKT-- 1248
Cdd:pfam15921 710 QTR----NTLKSMEGSDGHAMKVAMGMQKQITAKRGqidALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATek 785
|
810 820 830
....*....|....*....|....*....|....
gi 971420638 1249 --LQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQ 1280
Cdd:pfam15921 786 nkMAGELEVLRSQERRLKEKVANMEVALDKASLQ 819
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
357-1271 |
3.57e-13 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 74.70 E-value: 3.57e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 357 ALKEKQQHIEQLLAERDLERAEVAKATshvgeiEQELALVRDGHDRHVLEMEAKMDQLRAMVEAADREKVELLNQLEEEK 436
Cdd:TIGR00606 273 ALKSRKKQMEKDNSELELKMEKVFQGT------DEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELL 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 437 RKVEDLQFRVE--EESITKGDLERKrqiSEDPENVATVSEKSRIMELERDLALRVKEVAELRGRLESSKHIDDVDTSLSL 514
Cdd:TIGR00606 347 VEQGRLQLQADrhQEHIRARDSLIQ---SLATRLELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERL 423
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 515 LQE-ISSLQEKMAAAGKEHQREMSSLkEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELWKSKL 593
Cdd:TIGR00606 424 KQEqADEIRDEKKGLGRTIELKKEIL-EKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLTETLKKE 502
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 594 ESAIASHQQAMEELKVSFNKGVgAQTAEFAELKTQMEKVKLDYENEMSNLKlkqeNEKSQHLKEIEALkAKLLEVTEEKE 673
Cdd:TIGR00606 503 VKSLQNEKADLDRKLRKLDQEM-EQLNHHTTTRTQMEMLTKDKMDKDEQIR----KIKSRHSDELTSL-LGYFPNKKQLE 576
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 674 QTLENLKAKLEsvedqhlvEMEDTLNKLQeaeikvKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEgk 753
Cdd:TIGR00606 577 DWLHSKSKEIN--------QTRDRLAKLN------KELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGSQDEESD-- 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 754 leIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKftsavdga 833
Cdd:TIGR00606 641 --LERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDK-------- 710
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 834 enaqraMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLmKM 913
Cdd:TIGR00606 711 ------LKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEE-ES 783
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 914 NDELRLKERQLEQIQLELTKANEKAVQLQK-----NVEQTAQKAEQSQQETlkthQEELKKMQDQLTDMKKQMETSQNQY 988
Cdd:TIGR00606 784 AKVCLTDVTIMERFQMELKDVERKIAQQAAklqgsDLDRTVQQVNQEKQEK----QHELDTVVSKIELNRKLIQDQQEQI 859
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 989 KDLQAKYEKETSEMitkhdadikgfkqnlLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTmekvTKEK 1068
Cdd:TIGR00606 860 QHLKSKTNELKSEK---------------LQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLET----FLEK 920
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1069 DaiHQEKIETLASLENSrqtNEKLQNELDMLKQNnLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAaqksqQLAAL 1148
Cdd:TIGR00606 921 D--QQEKEELISSKETS---NKKAQDKVNDIKEK-VKNIHGYMKDIENKIQDGKDDYLKQKETELNTVNA-----QLEEC 989
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1149 QEENVKLAEELGRSRDEVTSHQKLEeerSVLNNQLLEMKkslpsntlRESTLKkEIDEERASLQKSISDTSalITQKDEE 1228
Cdd:TIGR00606 990 EKHQEKINEDMRLMRQDIDTQKIQE---RWLQDNLTLRK--------RENELK-EVEEELKQHLKEMGQMQ--VLQMKQE 1055
|
890 900 910 920
....*....|....*....|....*....|....*....|...
gi 971420638 1229 LEKLRNEITVLRGENASAKTLQsvvKTLESDKLKLEEKVKNLE 1271
Cdd:TIGR00606 1056 HQKLEENIDLIKRNHVLALGRQ---KGYEKEIKHFKKELREPQ 1095
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
215-275 |
3.98e-13 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 74.34 E-value: 3.98e-13
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 971420638 215 LKIGDRVLVGGTKaGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPRYGLF 275
Cdd:COG5244 4 LSVNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIF 63
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
785-1308 |
8.79e-13 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 73.15 E-value: 8.79e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 785 SNLTKELQGKEQKllDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQramqETINKLNQKEEQFALMSSELEQL 864
Cdd:PRK02224 190 DQLKAQIEEKEEK--DLHERLNGLESELAELDEEIERYEEQREQARETRDEAD----EVLEEHEERREELETLEAEIEDL 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 865 KSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKN 944
Cdd:PRK02224 264 RETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 945 VEQTAQKAEQSQQETlKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEkETSEMITKHDADIKGFKQNLLDAEEAL 1024
Cdd:PRK02224 344 AESLREDADDLEERA-EELREEAAELESELEEAREAVEDRREEIEELEEEIE-ELRERFGDAPVDLGNAEDFLEELREER 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1025 KAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVtkeKDAIHQEkietlaSLENSRQTNEKLQNELDMLKQNNL 1104
Cdd:PRK02224 422 DELREREAELEATLRTARERVEEAEALLEAGKCPECGQPV---EGSPHVE------TIEEDRERVEELEAELEDLEEEVE 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1105 KNEEELTKSKELLNLEnKKVEELKKEFEAL-------KLAAAQKSQQLAALQEENVKLAEELGRSRDEVT-SHQKLEEER 1176
Cdd:PRK02224 493 EVEERLERAEDLVEAE-DRIERLEERREDLeeliaerRETIEEKRERAEELRERAAELEAEAEEKREAAAeAEEEAEEAR 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1177 SV---LNNQLLEMKKSLPS-NTLRES-TLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKtlqs 1251
Cdd:PRK02224 572 EEvaeLNSKLAELKERIESlERIRTLlAAIADAEDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDEAR---- 647
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*..
gi 971420638 1252 vVKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSGDIAANLLQDESAEDKQQEI 1308
Cdd:PRK02224 648 -IEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEELRERREAL 703
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
346-1001 |
5.18e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 70.87 E-value: 5.18e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 346 RKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQeLALVRDghdrhVLEMEAKMDQLRAMVEA----- 420
Cdd:TIGR02169 244 RQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQ-LRVKEK-----IGELEAEIASLERSIAEkerel 317
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 421 --ADREKVELLNQLEEEKRKVEDLQFRVEEESItkgdleRKRQISEDPENVATVSEK--SRIMELERDLALRVKEVAELR 496
Cdd:TIGR02169 318 edAEERLAKLEAEIDKLLAEIEELEREIEEERK------RRDKLTEEYAELKEELEDlrAELEEVDKEFAETRDELKDYR 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 497 GRLESSKH-IDDVDTSLSLLQEissLQEKMAAAGKEHQREMSSLKEK---FESSEEALRKEIK-------TLSASNERMG 565
Cdd:TIGR02169 392 EKLEKLKReINELKRELDRLQE---ELQRLSEELADLNAAIAGIEAKineLEEEKEDKALEIKkqewkleQLAADLSKYE 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 566 KENESLKTKLDHANKENSDVielwKSKLESAIASHQQ---------AMEELKVSFNKGVGAQTAEFAELKTQMEK-VKLD 635
Cdd:TIGR02169 469 QELYDLKEEYDRVEKELSKL----QRELAEAEAQARAseervrggrAVEEVLKASIQGVHGTVAQLGSVGERYATaIEVA 544
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 636 YENEMSNLKLKQEN---EKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQ--HLVEME------------DTL 698
Cdd:TIGR02169 545 AGNRLNNVVVEDDAvakEAIELLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFavDLVEFDpkyepafkyvfgDTL 624
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 699 -------------------------------------------------NKLQEAEIKVKELD----VLQAKCNEQTKLI 725
Cdd:TIGR02169 625 vvedieaarrlmgkyrmvtlegelfeksgamtggsraprggilfsrsepAELQRLRERLEGLKrelsSLQSELRRIENRL 704
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 726 GSLTQQIRASEEKLldlAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNL 805
Cdd:TIGR02169 705 DELSQELSDASRKI---GEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEAL 781
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 806 SA------------VNQVKDSLEKELQLLkEKFTSAVDGAEN--------AQRAMQETINKLNQKEEQFALMSSELEQLK 865
Cdd:TIGR02169 782 NDlearlshsripeIQAELSKLEEEVSRI-EARLREIEQKLNrltlekeyLEKEIQELQEQRIDLKEQIKSIEKEIENLN 860
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 866 SNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNV 945
Cdd:TIGR02169 861 GKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPK 940
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 971420638 946 EQtaQKAEQSQQETLKTHQEELKKMQDQLTDMK-------KQMETSQNQYKDLQAKYEKETSE 1001
Cdd:TIGR02169 941 GE--DEEIPEEELSLEDVQAELQRVEEEIRALEpvnmlaiQEYEEVLKRLDELKEKRAKLEEE 1001
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
541-1237 |
1.22e-11 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 69.71 E-value: 1.22e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 541 EKFESSEEALRKEIKTLSASNERMGKENeslktkldhankensdvielwksklesaiashqqameelkvsfnkgvgAQTA 620
Cdd:PRK03918 158 DDYENAYKNLGEVIKEIKRRIERLEKFI------------------------------------------------KRTE 189
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 621 EFAELKTQMEKVKLDYENEMSNLklkqENEKSQHLKEIEALKAKLLEVTEEKEQtLENLKAKLESVEdQHLVEMEDTLNK 700
Cdd:PRK03918 190 NIEELIKEKEKELEEVLREINEI----SSELPELREELEKLEKEVKELEELKEE-IEELEKELESLE-GSKRKLEEKIRE 263
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 701 LQEA-EIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKlldlAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKvg 779
Cdd:PRK03918 264 LEERiEELKKEIEELEEKVKELKELKEKAEEYIKLSEFY----EEYLDELREIEKRLSRLEEEINGIEERIKELEEKE-- 337
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 780 gsSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKdSLEKELQLLKEKFTSavdgaenaqRAMQETINKLNQKEEQFALMSS 859
Cdd:PRK03918 338 --ERLEELKKKLKELEKRLEELEERHELYEEAK-AKKEELERLKKRLTG---------LTPEKLEKELEELEKAKEEIEE 405
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 860 ELEQLKSNLTVMETKLKEREEREQQLTEAKVKL--------ENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLEL 931
Cdd:PRK03918 406 EISKITARIGELKKEIKELKKAIEELKKAKGKCpvcgreltEEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELREL 485
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 932 TKANEKAVQLQKNvEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKetsemitkhdadIK 1011
Cdd:PRK03918 486 EKVLKKESELIKL-KELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEK------------LE 552
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1012 GFKQNLLDAEEALKAAQKKNDELETQAEELkkqaeqakadkrAEEVLQTMEKVTKEKDAIHQEKIEtlasLENSRQTNEK 1091
Cdd:PRK03918 553 ELKKKLAELEKKLDELEEELAELLKELEEL------------GFESVEELEERLKELEPFYNEYLE----LKDAEKELER 616
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1092 LQNELDmlkqnnlKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKsqQLAALQEENVKLAEELGRsrdevtshqk 1171
Cdd:PRK03918 617 EEKELK-------KLEEELDKAFEELAETEKRLEELRKELEELEKKYSEE--EYEELREEYLELSRELAG---------- 677
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 971420638 1172 LEEERSVLNNQLLEMKKSLpSNTLRESTLKKEIDEERASLQKSISDTSALItqkdEELEKLRNEIT 1237
Cdd:PRK03918 678 LRAELEELEKRREEIKKTL-EKLKEELEEREKAKKELEKLEKALERVEELR----EKVKKYKALLK 738
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
408-1111 |
2.07e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 68.99 E-value: 2.07e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 408 EAKMDQLRAMVEAADREKVELLnqLEEEKRKVEDLQFRVEEESitkgDLERKRQISEDpENVATVSEKSRIMELERDLAL 487
Cdd:pfam15921 58 EVELDSPRKIIAYPGKEHIERV--LEEYSHQVKDLQRRLNESN----ELHEKQKFYLR-QSVIDLQTKLQEMQMERDAMA 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 488 RVKE-----VAELRGRLESSKHIDDVDTSLS--LLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEI------ 554
Cdd:pfam15921 131 DIRRresqsQEDLRNQLQNTVHELEAAKCLKedMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIyehdsm 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 555 -----KTLSASNERMGKENESLKTKLDHANKENSDVIELWKS----KLESAIASHQQAMEELKVSFNKGVGAQTAEFAEL 625
Cdd:pfam15921 211 stmhfRSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKSesqnKIELLLQQHQDRIEQLISEHEVEITGLTEKASSA 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 626 KTQMEKVkldyENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMedtlNKLQEAE 705
Cdd:pfam15921 291 RSQANSI----QSQLEIIQEQARNQNSMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLAN----SELTEAR 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 706 IKVKELDVLQAKCNEQ-TKLIGSLTQQiraseEKLLDLAALQKA-----NSEGKLEIQKLSEQLQAAEKQIQNLE----T 775
Cdd:pfam15921 363 TERDQFSQESGNLDDQlQKLLADLHKR-----EKELSLEKEQNKrlwdrDTGNSITIDHLRRELDDRNMEVQRLEallkA 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 776 EKVGGSSKVSNLTKELQGKEQKLldleKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFA 855
Cdd:pfam15921 438 MKSECQGQMERQMAAIQGKNESL----EKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIE 513
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 856 LMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLE---------NDIAEIMKSSGDSSAQLM--------------- 911
Cdd:pfam15921 514 ATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEalklqmaekDKVIEILRQQIENMTQLVgqhgrtagamqveka 593
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 912 KMNDELRLKERQLEQIQLELTKANEKAVQLQKNV---EQTAQKAEQSQQETLKThQEELKKMQDQLTDmkkQMETSQNQY 988
Cdd:pfam15921 594 QLEKEINDRRLELQEFKILKDKKDAKIRELEARVsdlELEKVKLVNAGSERLRA-VKDIKQERDQLLN---EVKTSRNEL 669
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 989 KDLQAKYE---------KETSEMIT-KHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQ--AEQAKADKRAEE 1056
Cdd:pfam15921 670 NSLSEDYEvlkrnfrnkSEEMETTTnKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQitAKRGQIDALQSK 749
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*...
gi 971420638 1057 VL---QTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELT 1111
Cdd:pfam15921 750 IQfleEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVA 807
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
429-1131 |
2.61e-11 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 68.51 E-value: 2.61e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 429 LNQLEEEKRKVEDLQFRVEEEsitkgdlerkrqisedpenvatvseksrIMELERDLALRVKEVAELRGRLESSKhiddv 508
Cdd:TIGR04523 126 LNKLEKQKKENKKNIDKFLTE----------------------------IKKKEKELEKLNNKYNDLKKQKEELE----- 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 509 DTSLSLLQEISSLQEKMAAAGKEHQRemsslKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKEnsdviel 588
Cdd:TIGR04523 173 NELNLLEKEKLNIQKNIDKIKNKLLK-----LELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQE------- 240
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 589 wKSKLESAIASHQQAMEELKVSFNKgvgaqtaefaeLKTQMEKVKLDYENemSNLKLKQENeksqhlKEIEALKAKLLEV 668
Cdd:TIGR04523 241 -INEKTTEISNTQTQLNQLKDEQNK-----------IKKQLSEKQKELEQ--NNKKIKELE------KQLNQLKSEISDL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 669 TEEKEQ-TLENLKAKLESVEdqhlvemedtlnklqeaeikvKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDL----A 743
Cdd:TIGR04523 301 NNQKEQdWNKELKSELKNQE---------------------KKLEEIQNQISQNNKIISQLNEQISQLKKELTNSesenS 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 744 ALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNlsavnqvKDSLEKELQLLK 823
Cdd:TIGR04523 360 EKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQE-------KELLEKEIERLK 432
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 824 EKFT---SAVDGAENAQRAMQETINKLNQK----EEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDI 896
Cdd:TIGR04523 433 ETIIknnSEIKDLTNQDSVKELIIKNLDNTreslETQLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKV 512
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 897 AEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANE--KAVQLQKNVEQTAQKAEQSQQET--LKTHQEELKKMQD 972
Cdd:TIGR04523 513 KDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFelKKENLEKEIDEKNKEIEELKQTQksLKKKQEEKQELID 592
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 973 QLTDMKKQMETSQNQYKDLQAKYEKETSEMITKH---DADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAK 1049
Cdd:TIGR04523 593 QKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENeklSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEIIKKIKESK 672
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1050 adKRAEEVLQTMEKVTKEKDAIHQEKIetlaslensrqTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKK 1129
Cdd:TIGR04523 673 --TKIDDIIELMKDWLKELSLHYKKYI-----------TRMIRIKDLPKLEEKYKEIEKELKKLDEFSKELENIIKNFNK 739
|
..
gi 971420638 1130 EF 1131
Cdd:TIGR04523 740 KF 741
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
61-122 |
3.34e-11 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 67.79 E-value: 3.34e-11
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 971420638 61 VGERVWVNGNKpGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLRGIFTRP 122
Cdd:COG5244 6 VNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIFIRP 66
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
674-1235 |
3.35e-11 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 68.40 E-value: 3.35e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 674 QTLENLKAKLESVEDQ--HLVEMEDTLNKLQEAEIKVKELDVLQAKCN--EQTKLIGSLTQQIRASEEkllDLAALQKAN 749
Cdd:COG4913 235 DDLERAHEALEDAREQieLLEPIRELAERYAAARERLAELEYLRAALRlwFAQRRLELLEAELEELRA---ELARLEAEL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 750 SEGKLEIQKLSEQLQAAEKQIQNLETEKVGG-SSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTS 828
Cdd:COG4913 312 ERLEARLDALREELDELEAQIRGNGGDRLEQlEREIERLERELEERERRRARLEALLAALGLPLPASAEEFAALRAEAAA 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 829 AVDGAENAQRAMQ----ETINKLNQKEEQFALMSSELEQL---KSNLTVMETKLKEREEREQQLTEAKVKLendIAEIMK 901
Cdd:COG4913 392 LLEALEEELEALEealaEAEAALRDLRRELRELEAEIASLerrKSNIPARLLALRDALAEALGLDEAELPF---VGELIE 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 902 SSGDSS------------------------AQLMKMNDELRLKERqleqIQLELTKANEKAVQLQKNVEQT-AQKAEqsq 956
Cdd:COG4913 469 VRPEEErwrgaiervlggfaltllvppehyAAALRWVNRLHLRGR----LVYERVRTGLPDPERPRLDPDSlAGKLD--- 541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 957 qetLKTH------QEELKKM--------QDQLTDMKKQMeTSQNQYKDLQAKYEKetsemitkhDADIKGFKQNLL--DA 1020
Cdd:COG4913 542 ---FKPHpfrawlEAELGRRfdyvcvdsPEELRRHPRAI-TRAGQVKGNGTRHEK---------DDRRRIRSRYVLgfDN 608
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1021 EEALKAAQKKNDELETQAEELKKQAEQAKADKRAeevlqtmekVTKEKDAIHQekietLASLENSRQTNEKLQNELdmlk 1100
Cdd:COG4913 609 RAKLAALEAELAELEEELAEAEERLEALEAELDA---------LQERREALQR-----LAEYSWDEIDVASAEREI---- 670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1101 qnnlkneEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLN 1180
Cdd:COG4913 671 -------AELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLA 743
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 971420638 1181 NQLLEmkkSLPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNE 1235
Cdd:COG4913 744 RLELR---ALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
620-1201 |
3.66e-11 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 67.84 E-value: 3.66e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 620 AEFAELKTQMEKVKldyeNEMSNLKLKQENEKSQHLKEIEALKAKLlevTEEKEQTLEnLKAKLESVEDQHLVEMEDTLN 699
Cdd:pfam05557 2 AELIESKARLSQLQ----NEKKQMELEHKRARIELEKKASALKRQL---DRESDRNQE-LQKRIRLLEKREAEAEEALRE 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 700 KLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLA-ALQKANSEGK---LEIQKLSEQLQAAEKQIQNLET 775
Cdd:pfam05557 74 QAELNRLKKKYLEALNKKLNEKESQLADAREVISCLKNELSELRrQIQRAELELQstnSELEELQERLDLLKAKASEAEQ 153
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 776 EKVGGSSKvsnlTKELQGKEQKLLDLEKNLSAVNQ----VKDS---------LEKELQLLKEKFTSAVDGAENAQrAMQE 842
Cdd:pfam05557 154 LRQNLEKQ----QSSLAEAEQRIKELEFEIQSQEQdseiVKNSkselaripeLEKELERLREHNKHLNENIENKL-LLKE 228
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 843 TINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVK---LENDIAEIMKSSGDSSAQLMKMNDELRL 919
Cdd:pfam05557 229 EVEDLKRKLEREEKYREEAATLELEKEKLEQELQSWVKLAQDTGLNLRSpedLSRRIEQLQQREIVLKEENSSLTSSARQ 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 920 KERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEE--LKKMQDQLTDmkkqmETSQNQYKDLQAKYEK 997
Cdd:pfam05557 309 LEKARRELEQELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKERdgYRAILESYDK-----ELTMSNYSPQLLERIE 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 998 ETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVlqtmekvtkekDAIHQeKIE 1077
Cdd:pfam05557 384 EAEDMTQKMQAHNEEMEAQLSVAEEELGGYKQQAQTLERELQALRQQESLADPSYSKEEV-----------DSLRR-KLE 451
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1078 TLaSLENSRQTNEKLQNELDMLKQnNLKNEEELTKSKELLNLENKKVEelkkefealklAAAQKSQQLAALQEENVKLAE 1157
Cdd:pfam05557 452 TL-ELERQRLREQKNELEMELERR-CLQGDYDPKKTKVLHLSMNPAAE-----------AYQQRKNQLEKLQAEIERLKR 518
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 971420638 1158 ELGRSRDEVTSHQKLEEERSVLNNQ-LLEMKKSLPSNTLRESTLK 1201
Cdd:pfam05557 519 LLKKLEDDLEQVLRLPETTSTMNFKeVLDLRKELESAELKNQRLK 563
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
796-1012 |
4.34e-11 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 66.33 E-value: 4.34e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 796 QKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKL 875
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 876 KEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMN--------------DELRLKERQLEQIQLELTKANEKAVQL 941
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLqylkylaparreqaEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 971420638 942 QKNVEQ---TAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKG 1012
Cdd:COG4942 180 LAELEEeraALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKG 253
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
668-1258 |
5.51e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 67.37 E-value: 5.51e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 668 VTEEKEQTLENLKAKLESVEDQHLVEmedtlnKLQEAEIKVKELDVLQAKCNEQ----TKLIGSLTQQIRASEEKLLDLA 743
Cdd:PRK02224 181 VLSDQRGSLDQLKAQIEEKEEKDLHE------RLNGLESELAELDEEIERYEEQreqaRETRDEADEVLEEHEERREELE 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 744 AL-------QKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGG--------------SSKVSNLTKELQGKEQKLLDLE 802
Cdd:PRK02224 255 TLeaeiedlRETIAETEREREELAEEVRDLRERLEELEEERDDLlaeaglddadaeavEARREELEDRDEELRDRLEECR 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 803 KNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREERE 882
Cdd:PRK02224 335 VAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFL 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 883 QQLTEAKVKLENDIAEImkssgdsSAQLMKMNDELRLKERQLEQiqlelTKANE--KAVQLQKNVEQTAQKAEQ-----S 955
Cdd:PRK02224 415 EELREERDELREREAEL-------EATLRTARERVEEAEALLEA-----GKCPEcgQPVEGSPHVETIEEDRERveeleA 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 956 QQETLKTHQEELKKMQDQLTDMKK---QMETSQNQYKDLQakyeketsEMITKHDADIKgfkqnllDAEEALKAAQKKND 1032
Cdd:PRK02224 483 ELEDLEEEVEEVEERLERAEDLVEaedRIERLEERREDLE--------ELIAERRETIE-------EKRERAEELRERAA 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1033 ELETQAEElkKQAEQAKADKRAEEVLQTMEKVTKEKDAIhQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTK 1112
Cdd:PRK02224 548 ELEAEAEE--KREAAAEAEEEAEEAREEVAELNSKLAEL-KERIESLERIRTLLAAIADAEDEIERLREKREALAELNDE 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1113 SKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVklAEELgrsrdevtshqkleeersvlnnqllemkkslps 1192
Cdd:PRK02224 625 RRERLAEKRERKRELEAEFDEARIEEAREDKERAEEYLEQV--EEKL--------------------------------- 669
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 971420638 1193 ntlrestlkKEIDEERASLQKSIsdtsALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLES 1258
Cdd:PRK02224 670 ---------DELREERDDLQAEI----GAVENELEELEELRERREALENRVEALEALYDEAEELES 722
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
755-1329 |
6.27e-11 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 66.97 E-value: 6.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 755 EIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAE 834
Cdd:TIGR04523 41 KLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKN 120
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 835 NAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSsgdssaqlmkmN 914
Cdd:TIGR04523 121 KLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKN-----------I 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 915 DELRLKERQLEQIQLELTKANEKAVQLQKNVEQTaqkaeQSQQETLKthqEELKKMQDQLTDMKKQMETSQNQYKDLQAK 994
Cdd:TIGR04523 190 DKIKNKLLKLELLLSNLKKKIQKNKSLESQISEL-----KKQNNQLK---DNIEKKQQEINEKTTEISNTQTQLNQLKDE 261
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 995 YEKEtsemitkhdadikgfKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEevlqTMEKVTKEKDAIHQE 1074
Cdd:TIGR04523 262 QNKI---------------KKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQD----WNKELKSELKNQEKK 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1075 KIETLASLENSRQTNEKLQNELDMLKqnnlkneeeltksKELLNLENKKvEELKKEFEalklaaaQKSQQLAALQEENVK 1154
Cdd:TIGR04523 323 LEEIQNQISQNNKIISQLNEQISQLK-------------KELTNSESEN-SEKQRELE-------EKQNEIEKLKKENQS 381
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1155 LAEELgrsrdevtshQKLEEERSVLNNQLLEMKKSlpsNTLRESTLKKeIDEERASLQKSISDTSALITQKDEELEKLRN 1234
Cdd:TIGR04523 382 YKQEI----------KNLESQINDLESKIQNQEKL---NQQKDEQIKK-LQQEKELLEKEIERLKETIIKNNSEIKDLTN 447
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1235 EITVLrgeNASAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQpltvtspsgdiaanllqdesAEDKQQEIDFLNSV 1314
Cdd:TIGR04523 448 QDSVK---ELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKE--------------------LKSKEKELKKLNEE 504
|
570
....*....|....*
gi 971420638 1315 IVDLQRRNEELNLKI 1329
Cdd:TIGR04523 505 KKELEEKVKDLTKKI 519
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
642-1357 |
6.62e-11 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 67.30 E-value: 6.62e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 642 NLKLKQENE-KSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLEsvedqhLVEMEDTLNKLQEAEIKVKELDVLQAKCNE 720
Cdd:pfam02463 175 LKKLIEETEnLAELIIDLEELKLQELKLKEQAKKALEYYQLKEK------LELEEEYLLYLDYLKLNEERIDLLQELLRD 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 721 QTKLIGSLTQQIRASEEKLldlAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLD 800
Cdd:pfam02463 249 EQEEIESSKQEIEKEEEKL---AQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKK 325
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 801 LEKNLSAVNQVKDSLEKELQLLKEKFTsavdgaenaqrAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKERee 880
Cdd:pfam02463 326 AEKELKKEKEEIEELEKELKELEIKRE-----------AEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKL-- 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 881 REQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKnveQTAQKAEQSQQETL 960
Cdd:pfam02463 393 KEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEK---QELKLLKDELELKK 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 961 KTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNL------LDAEEALKAAQKKNDEL 1034
Cdd:pfam02463 470 SEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISahgrlgDLGVAVENYKVAISTAV 549
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1035 ETQAEELKKQAEQAKADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSK 1114
Cdd:pfam02463 550 IVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGIL 629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1115 ELLNLEN-----KKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKS 1189
Cdd:pfam02463 630 KDTELTKlkesaKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREK 709
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1190 LPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKN 1269
Cdd:pfam02463 710 EELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVE 789
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1270 LEQKLKAKSEQPLTVTSPSGDIAANLLQDESAEDKQQEIDFLNSVIVDLQRRNEELNLKIQRMCEAALNGNEEETINYDS 1349
Cdd:pfam02463 790 EEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELL 869
|
....*...
gi 971420638 1350 EEEGLSKK 1357
Cdd:pfam02463 870 QELLLKEE 877
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
770-1282 |
8.82e-11 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 66.79 E-value: 8.82e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 770 IQNLETEKVGGSSKVSNLTKE--LQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKL 847
Cdd:pfam12128 148 IQNDRTLLGRERVELRSLARQfaLCDSESPLRHIDKIAKAMHSKEGKFRDVKSMIVAILEDDGVVPPKSRLNRQQVEHWI 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 848 NQKEEQFALMSSELEQLKsnltvMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQ- 926
Cdd:pfam12128 228 RDIQAIAGIMKIRPEFTK-----LQQEFNTLESAELRLSHLHFGYKSDETLIASRQEERQETSAELNQLLRTLDDQWKEk 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 927 ---IQLELTKANEKAVQLQKNVEQTAQKAEQSQQ---ETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETS 1000
Cdd:pfam12128 303 rdeLNGELSAADAAVAKDRSELEALEDQHGAFLDadiETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRS 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1001 EMITKHDADIKGFKQNLLDA-EEALKAAQKKNDELETQAEELKKQAEQAKADKRaEEVLQTMEKVTKEKDAIHQEKI--E 1077
Cdd:pfam12128 383 KIKEQNNRDIAGIKDKLAKIrEARDRQLAVAEDDLQALESELREQLEAGKLEFN-EEEYRLKSRLGELKLRLNQATAtpE 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1078 TLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSK-------ELLNLENKKVEELKKEFEALKLAAAQKSQQL----- 1145
Cdd:pfam12128 462 LLLQLENFDERIERAREEQEAANAEVERLQSELRQARkrrdqasEALRQASRRLEERQSALDELELQLFPQAGTLlhflr 541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1146 --AALQEENV-KLA--EELGRSR-DEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKkeidEERASLQKSISDTS 1219
Cdd:pfam12128 542 keAPDWEQSIgKVIspELLHRTDlDPEVWDGSVGGELNLYGVKLDLKRIDVPEWAASEEELR----ERLDKAEEALQSAR 617
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 971420638 1220 ALITQKDEELEKLRNEITVL-RGENASAKTLQSVVKTL-------ESDKLKLEEKVKNlEQKLKAKSEQPL 1282
Cdd:pfam12128 618 EKQAAAEEQLVQANGELEKAsREETFARTALKNARLDLrrlfdekQSEKDKKNKALAE-RKDSANERLNSL 687
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
875-1250 |
2.62e-10 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 64.79 E-value: 2.62e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 875 LKEREEREQQLTEAKVKLENDIAEImkssgdssAQLMKMNDELRLKERQLEQIQLELTKAnEKAVQLQKNVEQTAQ---- 950
Cdd:COG4717 70 LKELKELEEELKEAEEKEEEYAELQ--------EELEELEEELEELEAELEELREELEKL-EKLLQLLPLYQELEAleae 140
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 951 -KAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQK 1029
Cdd:COG4717 141 lAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQE 220
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1030 KNDELETQAEELKKQAEQAKADKRAEEVLQT--------------------------------------MEKVTKEKDAI 1071
Cdd:COG4717 221 ELEELEEELEQLENELEAAALEERLKEARLLlliaaallallglggsllsliltiagvlflvlgllallFLLLAREKASL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1072 HQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQlAALQEE 1151
Cdd:COG4717 301 GKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIA-ALLAEA 379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1152 NVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLpsNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEK 1231
Cdd:COG4717 380 GVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGEL--EELLEALDEEELEEELEELEEELEELEEELEELREELAE 457
|
410
....*....|....*....
gi 971420638 1232 LRNEITVLRGENASAKTLQ 1250
Cdd:COG4717 458 LEAELEQLEEDGELAELLQ 476
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
406-1280 |
3.58e-10 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 65.07 E-value: 3.58e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 406 EMEAKMDQLRAMVEAADREKVELLNQLEEEKRKVEDLQFRVEeesitkgDLERKrQISEDPENVatvseksRIMELERDL 485
Cdd:TIGR01612 541 EIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEKEIK-------DLFDK-YLEIDDEII-------YINKLKLEL 605
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 486 ALRVKEVAE----LRGRLESSKHIDDVDTSLSLLQEISSLQ--EKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSA 559
Cdd:TIGR01612 606 KEKIKNISDkneyIKKAIDLKKIIENNNAYIDELAKISPYQvpEHLKNKDKIYSTIKSELSKIYEDDIDALYNELSSIVK 685
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 560 SNERMGKEN----ESLKTKLDhanKENSDVIELWKSKLESAIASHQQAMEELKVSFnkgVGAQTAEFAELKTQMEKVKLD 635
Cdd:TIGR01612 686 ENAIDNTEDkaklDDLKSKID---KEYDKIQNMETATVELHLSNIENKKNELLDII---VEIKKHIHGEINKDLNKILED 759
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 636 YENEMSNLKLKQeNEKSQHLKEIEALKAKLLEVTEEKeqtleNLKAKLESVEDqhlvemEDTLNKLQEAEIKVKELDVlq 715
Cdd:TIGR01612 760 FKNKEKELSNKI-NDYAKEKDELNKYKSKISEIKNHY-----NDQINIDNIKD------EDAKQNYDKSKEYIKTISI-- 825
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 716 aKCNEQTKLIgsltqqiraSEEKLLDLAALQKANSEGKLEiqklseqlqaaekqiqNLETEKV-GGSSKVSNLTKELQGK 794
Cdd:TIGR01612 826 -KEDEIFKII---------NEMKFMKDDFLNKVDKFINFE----------------NNCKEKIdSEHEQFAELTNKIKAE 879
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 795 --EQKLLDLEKNL----SAVNQVKDSLEKELQLLKEkfTSAVDGAENAQRAMQETINKLNQKEEQFAlmsselEQLKSNL 868
Cdd:TIGR01612 880 isDDKLNDYEKKFndskSLINEINKSIEEEYQNINT--LKKVDEYIKICENTKESIEKFHNKQNILK------EILNKNI 951
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 869 -TVMETKLKEREEREQ---QLTEAKVKLENDIAEIMKSSGDS-SAQLMKMNDELRL-----KERQLEQIQLELTKANEKA 938
Cdd:TIGR01612 952 dTIKESNLIEKSYKDKfdnTLIDKINELDKAFKDASLNDYEAkNNELIKYFNDLKAnlgknKENMLYHQFDEKEKATNDI 1031
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 939 VQLQKNVEQTAQKAEQSQQETLKTHQEEL-----KKMQDQLTDMKKQMETSQNQYKDLQAKYE-------------KETS 1000
Cdd:TIGR01612 1032 EQKIEDANKNIPNIEIAIHTSIYNIIDEIekeigKNIELLNKEILEEAEINITNFNEIKEKLKhynfddfgkeeniKYAD 1111
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1001 EmITKHDADIKGFKQ----NLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVTKEKDAiHQEKI 1076
Cdd:TIGR01612 1112 E-INKIKDDIKNLDQkidhHIKALEEIKKKSENYIDEIKAQINDLEDVADKAISNDDPEEIEKKIENIVTKIDK-KKNIY 1189
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1077 ETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKskelLNLEnkKVEELKKEFEALKLAAAQKSQQLAALQEENVKLA 1156
Cdd:TIGR01612 1190 DEIKKLLNEIAEIEKDKTSLEEVKGINLSYGKNLGK----LFLE--KIDEEKKKSEHMIKAMEAYIEDLDEIKEKSPEIE 1263
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1157 EELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPS-NTLRESTLK--------KEIDEERASLQKSISDTSALITQKDE 1227
Cdd:TIGR01612 1264 NEMGIEMDIKAEMETFNISHDDDKDHHIISKKHDENiSDIREKSLKiiedfseeSDINDIKKELQKNLLDAQKHNSDINL 1343
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|...
gi 971420638 1228 ELEKLRNEITVLRGENasaktLQSVVKTLESDKLKLEEKVKNLEQKLkAKSEQ 1280
Cdd:TIGR01612 1344 YLNEIANIYNILKLNK-----IKKIIDEVKEYTKEIEENNKNIKDEL-DKSEK 1390
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
337-899 |
4.15e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 64.57 E-value: 4.15e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 337 LTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlvrdghdrhvlEMEAKMDQLRA 416
Cdd:COG1196 290 EYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELE-----------EAEEELEEAEA 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 417 MVEAADREKVELLNQLEEEKRKVEDLQFRVEEEsitKGDLERKRQISEDPENVATVSEKSRIMELERDLALRVKEVAELR 496
Cdd:COG1196 359 ELAEAEEALLEAEAELAEAEEELEELAEELLEA---LRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEE 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 497 GRLESSKHIDDVDTSLS-LLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKL 575
Cdd:COG1196 436 EEEEEEEALEEAAEEEAeLEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALL 515
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 576 DHANKENS---DVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFAeLKTQMEKVKLDYENEMSNLKLKQENEKS 652
Cdd:COG1196 516 LAGLRGLAgavAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYL-KAAKAGRATFLPLDKIRARAALAAALAR 594
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 653 QHLKEIEALKAKLLEVTEEKEQTLENlkAKLESVEDQHLVEMEDTLNKLQEAEIKVKELDvlqakcneqtkLIGSLTQQI 732
Cdd:COG1196 595 GAIGAAVDLVASDLREADARYYVLGD--TLLGRTLVAARLEAALRRAVTLAGRLREVTLE-----------GEGGSAGGS 661
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 733 RASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKvggsskvsnltKELQGKEQKLLDLEKNLSAVNQVK 812
Cdd:COG1196 662 LTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEE-----------RELAEAEEERLEEELEEEALEEQL 730
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 813 DSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLnqkEEQFALMSSELEQL-KSNLTVME--TKLKER----EEREQQL 885
Cdd:COG1196 731 EAEREELLEELLEEEELLEEEALEELPEPPDLEEL---ERELERLEREIEALgPVNLLAIEeyEELEERydflSEQREDL 807
|
570
....*....|....
gi 971420638 886 TEAKVKLENDIAEI 899
Cdd:COG1196 808 EEARETLEEAIEEI 821
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
652-982 |
4.92e-10 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 64.54 E-value: 4.92e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 652 SQHLKEIEALKAKLLEVTEEKEQ----TLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKELDVLQakcneqtkligs 727
Cdd:PLN02939 102 MQRDEAIAAIDNEQQTNSKDGEQlsdfQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQ------------ 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 728 ltQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLqaaEKQIQNLETEKVGGSSKVSNLTKELQgkeqkLLDLEkNLSa 807
Cdd:PLN02939 170 --GKINILEMRLSETDARIKLAAQEKIHVEILEEQL---EKLRNELLIRGATEGLCVHSLSKELD-----VLKEE-NML- 237
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 808 vnqvkdsLEKELQLLKEKFTSavdgaenaqraMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTE 887
Cdd:PLN02939 238 -------LKDDIQFLKAELIE-----------VAETEERVFKLEKERSLLDASLRELESKFIVAQEDVSKLSPLQYDCWW 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 888 AKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQiqlELTKAN------EKAVQLQKNVEQTAQKAEQSQQET-- 959
Cdd:PLN02939 300 EKVENLQDLLDRATNQVEKAALVLDQNQDLRDKVDKLEA---SLKEANvskfssYKVELLQQKLKLLEERLQASDHEIhs 376
|
330 340
....*....|....*....|....
gi 971420638 960 -LKTHQEELKKMQDQLTDMKKQME 982
Cdd:PLN02939 377 yIQLYQESIKEFQDTLSKLKEESK 400
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
801-996 |
6.72e-10 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 63.88 E-value: 6.72e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 801 LEKNLSAVNQVKDSLEKELQLLKEKftsaVDGAENAQRAMQETiNKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREE 880
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKE----LEEAEAALEEFRQK-NGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEA 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 881 REQQLTEAKVKLENDIAEIMkssgdSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVE-------------- 946
Cdd:COG3206 241 RLAALRAQLGSGPDALPELL-----QSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAalraqlqqeaqril 315
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 947 -------QTAQKAEQSQQETLKTHQEELKKM---QDQLTDMKKQMETSQNQYKDLQAKYE 996
Cdd:COG3206 316 asleaelEALQAREASLQAQLAQLEARLAELpelEAELRRLEREVEVARELYESLLQRLE 375
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
636-1068 |
6.83e-10 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 63.63 E-value: 6.83e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 636 YENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTE------EKEQTLENLKAKLESVEDQ--HLVEMEDTLNKLQEAEIK 707
Cdd:COG4717 51 LEKEADELFKPQGRKPELNLKELKELEEELKEAEEkeeeyaELQEELEELEEELEELEAEleELREELEKLEKLLQLLPL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 708 VKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQL-QAAEKQIQNLETEKVGGSSKVSN 786
Cdd:COG4717 131 YQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLsLATEEELQDLAEELEELQQRLAE 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 787 LTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKS 866
Cdd:COG4717 211 LEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLF 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 867 NLTVMETKLKEREEREQQLTEAKVKLEN-DIAEIMKSSG--------------DSSAQLMKMNDELRLKERQLEQIQLEL 931
Cdd:COG4717 291 LLLAREKASLGKEAEELQALPALEELEEeELEELLAALGlppdlspeellellDRIEELQELLREAEELEEELQLEELEQ 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 932 TKANEKAVQLQKNVEQTAQKAEQSQQetLKTHQEELKKMQDQLTDMKKQMET--SQNQYKDLQAKYE------KETSEMI 1003
Cdd:COG4717 371 EIAALLAEAGVEDEEELRAALEQAEE--YQELKEELEELEEQLEELLGELEEllEALDEEELEEELEeleeelEELEEEL 448
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 971420638 1004 TKHDADIKGFKQNLLDAEEALKAAQKKnDELETQAEELKKQAEQAKADKRAEEVLQTMEKVTKEK 1068
Cdd:COG4717 449 EELREELAELEAELEQLEEDGELAELL-QELEELKAELRELAEEWAALKLALELLEEAREEYREE 512
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
480-1155 |
1.02e-09 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 63.30 E-value: 1.02e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 480 ELERDLALRVKEVAELRGRLESSKHIDDVDTSLSLlqEISSLQEKMAAagkehQREMSSL-----------KEKFESSEE 548
Cdd:pfam10174 40 ELKKERALRKEEAARISVLKEQYRVTQEENQHLQL--TIQALQDELRA-----QRDLNQLlqqdfttspvdGEDKFSTPE 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 549 ALRKEIKTLSASNERMGKENESLKTKLDHANKEnsdvIELWKSKLESAIASHQQAMEELK--------VSFNKGVGAQTA 620
Cdd:pfam10174 113 LTEENFRRLQSEHERQAKELFLLRKTLEEMELR----IETQKQTLGARDESIKKLLEMLQskglpkksGEEDWERTRRIA 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 621 EfAELKTQMEKVKLDyENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNK 700
Cdd:pfam10174 189 E-AEMQLGHLEVLLD-QKEKENIHLREELHRRNQLQPDPAKTKALQTVIEMKDTKISSLERNIRDLEDEVQMLKTNGLLH 266
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 701 LQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLL----DLAALQKANSEGKLEIQKLSEQLQAAE--------- 767
Cdd:pfam10174 267 TEDREEEIKQMEVYKSHSKFMKNKIDQLKQELSKKESELLalqtKLETLTNQNSDCKQHIEVLKESLTAKEqraailqte 346
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 768 -------------------KQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTS 828
Cdd:pfam10174 347 vdalrlrleekesflnkktKQLQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQKKIENLQEQLRDKDKQLAGLKERVKS 426
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 829 ----------AVDGAENAQRAMQETINKL-NQKEEQFALMSSELEQLKSNLTVMETKL----KEREEREQQLTEAKVKLE 893
Cdd:pfam10174 427 lqtdssntdtALTTLEEALSEKERIIERLkEQREREDRERLEELESLKKENKDLKEKVsalqPELTEKESSLIDLKEHAS 506
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 894 NDIAEIMKssgdSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEqTAQKAEQSQQEtLKTHQEELKKMQ-- 971
Cdd:pfam10174 507 SLASSGLK----KDSKLKSLEIAVEQKKEECSKLENQLKKAHNAEEAVRTNPE-INDRIRLLEQE-VARYKEESGKAQae 580
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 972 -DQLTDMKKQMETSQNQYKDLQAKYEKETSEMITkhDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQaka 1050
Cdd:pfam10174 581 vERLLGILREVENEKNDKDKKIAELESLTLRQMK--EQNKKVANIKHGQQEMKKKGAQLLEEARRREDNLADNSQQL--- 655
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1051 dkRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNE--------LDMLKQNNLKNEEELTKSKELLNLENK 1122
Cdd:pfam10174 656 --QLEELMGALEKTRQELDATKARLSSTQQSLAEKDGHLTNLRAErrkqleeiLEMKQEALLAAISEKDANIALLELSSS 733
|
730 740 750
....*....|....*....|....*....|...
gi 971420638 1123 KVEELKKEFEALKLAAAQKSQQLAALQEENVKL 1155
Cdd:pfam10174 734 KKKKTQEEVMALKREKDRLVHQLKQQTQNRMKL 766
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
354-1345 |
1.66e-09 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 63.15 E-value: 1.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 354 LQEALKEKQQHIEQLLAERDLERAEVAKATSHV-GEIEQELALVRDGhdrhvlEMEAKMDQLRAMVEAADREKVELLNQL 432
Cdd:TIGR01612 625 LKKIIENNNAYIDELAKISPYQVPEHLKNKDKIySTIKSELSKIYED------DIDALYNELSSIVKENAIDNTEDKAKL 698
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 433 EEEKRKVEDLQFRVE--EESITKGDLERKRQISEDPENVATVSEKSRIMELERDLALRVKEVAELRGRLES-----SKHI 505
Cdd:TIGR01612 699 DDLKSKIDKEYDKIQnmETATVELHLSNIENKKNELLDIIVEIKKHIHGEINKDLNKILEDFKNKEKELSNkindyAKEK 778
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 506 DDVDTSLSLLQEISSLQEKMAAAGKEHQREMsslKEKFESSEEALR----KEIKTLSASNERMGKENESLKTKLDHANKE 581
Cdd:TIGR01612 779 DELNKYKSKISEIKNHYNDQINIDNIKDEDA---KQNYDKSKEYIKtisiKEDEIFKIINEMKFMKDDFLNKVDKFINFE 855
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 582 NSDvielwKSKLESAIASHQQAMEELKVSF-NKGVGAQTAEFAELKTQMEKVKLDYENEMSNLK-LKQENEksqHLKEIE 659
Cdd:TIGR01612 856 NNC-----KEKIDSEHEQFAELTNKIKAEIsDDKLNDYEKKFNDSKSLINEINKSIEEEYQNINtLKKVDE---YIKICE 927
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 660 ALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVE------MEDTL-NKLQEAEIKVKELDV--LQAKCNEQTKLIGSLTQ 730
Cdd:TIGR01612 928 NTKESIEKFHNKQNILKEILNKNIDTIKESNLIEksykdkFDNTLiDKINELDKAFKDASLndYEAKNNELIKYFNDLKA 1007
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 731 QIRASEEKLLdlaalQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLD------LEKN 804
Cdd:TIGR01612 1008 NLGKNKENML-----YHQFDEKEKATNDIEQKIEDANKNIPNIEIAIHTSIYNIIDEIEKEIGKNIELLNkeileeAEIN 1082
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 805 LSAVNQVKDSLE--KELQLLKE---KFTSAV----DGAENAQRAMQETINKL----NQKEEQFALMSSELEQLK--SNLT 869
Cdd:TIGR01612 1083 ITNFNEIKEKLKhyNFDDFGKEeniKYADEInkikDDIKNLDQKIDHHIKALeeikKKSENYIDEIKAQINDLEdvADKA 1162
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 870 VMETKLKEREEREQQLT----------EAKVKLENDIAEIMKSSGD-SSAQLMKMNDELRLKERQLEQIQLELTKANEKA 938
Cdd:TIGR01612 1163 ISNDDPEEIEKKIENIVtkidkkkniyDEIKKLLNEIAEIEKDKTSlEEVKGINLSYGKNLGKLFLEKIDEEKKKSEHMI 1242
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 939 VQLQKNVEQTAQKAEQSQqetlkthqeELKKMQDQLTDMKKQMET---SQNQYKD---LQAKYEKETSEMITKHDADIKG 1012
Cdd:TIGR01612 1243 KAMEAYIEDLDEIKEKSP---------EIENEMGIEMDIKAEMETfniSHDDDKDhhiISKKHDENISDIREKSLKIIED 1313
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1013 F--KQNLLDAEEALKA----AQKKNDELETQAEELKKqaeqakadkraeevLQTMEKVTKEKDAIHQEKIETLASLENSR 1086
Cdd:TIGR01612 1314 FseESDINDIKKELQKnlldAQKHNSDINLYLNEIAN--------------IYNILKLNKIKKIIDEVKEYTKEIEENNK 1379
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1087 QTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKL------------------------------ 1136
Cdd:TIGR01612 1380 NIKDELDKSEKLIKKIKDDINLEECKSKIESTLDDKDIDECIKKIKELKNhilseesnidtyfknadennenvlllfkni 1459
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1137 -AAAQKSQQLAALQEENV---------KLAEELGRS---RDEVTSHQKLEEERSVLNNQLLEMKKSLpSNTLRESTLKKE 1203
Cdd:TIGR01612 1460 eMADNKSQHILKIKKDNAtndhdfninELKEHIDKSkgcKDEADKNAKAIEKNKELFEQYKKDVTEL-LNKYSALAIKNK 1538
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1204 IDEERASLQKSISDTSALITQ-------KDEELEKLRNEITVLRGE-------NASAKTLQSVVKTLESDKLKLEE---- 1265
Cdd:TIGR01612 1539 FAKTKKDSEIIIKEIKDAHKKfileaekSEQKIKEIKKEKFRIEDDaakndksNKAAIDIQLSLENFENKFLKISDikkk 1618
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1266 ------KVKNLEQKLKAKS-EQPLTVTSPSGDIAANLL--------QDESAEDKQQEIDFLNSVI------VDLQRRNEE 1324
Cdd:TIGR01612 1619 indclkETESIEKKISSFSiDSQDTELKENGDNLNSLQefleslkdQKKNIEDKKKELDELDSEIekieidVDQHKKNYE 1698
|
1130 1140
....*....|....*....|..
gi 971420638 1325 LNLkIQRMCEAAL-NGNEEETI 1345
Cdd:TIGR01612 1699 IGI-IEKIKEIAIaNKEEIESI 1719
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
836-1192 |
1.86e-09 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 62.16 E-value: 1.86e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 836 AQRAMQETINKLNQKEEQFALMSSELEQLKSNltvmetklkereerEQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMND 915
Cdd:PRK04778 103 AKHEINEIESLLDLIEEDIEQILEELQELLES--------------EEKNREEVEQLKDLYRELRKSLLANRFSFGPALD 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 916 ELrlkERQLEQIQLELTKANEkavqlqknveqtaqkaEQSQQETLKTHqEELKKMQDQLTDMKKQMETSQNQYKDLQAKY 995
Cdd:PRK04778 169 EL---EKQLENLEEEFSQFVE----------------LTESGDYVEAR-EILDQLEEELAALEQIMEEIPELLKELQTEL 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 996 EKETSEMITKHDADI-KGFKQNLLDAEEALKAAQKKNDELETQAEELK-KQAEQA--KADKRAEEVLQTMEKVTKEKDAI 1071
Cdd:PRK04778 229 PDQLQELKAGYRELVeEGYHLDHLDIEKEIQDLKEQIDENLALLEELDlDEAEEKneEIQERIDQLYDILEREVKARKYV 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1072 HQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELlnleNKKVEELKKEFEALKLAAAQKSQ-------- 1143
Cdd:PRK04778 309 EKNSDTLPDFLEHAKEQNKELKEEIDRVKQSYTLNESELESVRQL----EKQLESLEKQYDEITERIAEQEIayselqee 384
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 971420638 1144 ------QLAALQEENVKLAEELGRSR-DEVTSHQKLEEERSVLNNQLLEMKKS-LPS 1192
Cdd:PRK04778 385 leeilkQLEEIEKEQEKLSEMLQGLRkDELEAREKLERYRNKLHEIKRYLEKSnLPG 441
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
618-1332 |
3.37e-09 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 61.60 E-value: 3.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 618 QTAEFAELKTQMEKVKLDY-----ENEMSNLKLKQENEKSQHLKEI----EALKAKLLEVTEEKEQTLENLKAKLESVED 688
Cdd:TIGR00606 180 SATRYIKALETLRQVRQTQgqkvqEHQMELKYLKQYKEKACEIRDQitskEAQLESSREIVKSYENELDPLKNRLKEIEH 259
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 689 Q--HLVEMEDTLNKLQE---------AEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLA-ALQKANSEGKLEI 756
Cdd:TIGR00606 260 NlsKIMKLDNEIKALKSrkkqmekdnSELELKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDCQrELEKLNKERRLLN 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 757 QKLSEQLqaAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEkelqLLKEKFTsavDGAENA 836
Cdd:TIGR00606 340 QEKTELL--VEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQIKNFHT----LVIERQE---DEAKTA 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 837 QRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEreqqlteakvKLENDIAEIMKSSGdSSAQLMKMNDE 916
Cdd:TIGR00606 411 AQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQE----------ELKFVIKELQQLEG-SSDRILELDQE 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 917 LRLKERQL----EQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMqdqLTDMKKQMETSQNQYKdlq 992
Cdd:TIGR00606 480 LRKAERELskaeKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQM---EMLTKDKMDKDEQIRK--- 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 993 akyeketseMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKK-QAEQAKADKRAEEVLQTMEKVTKEKDAI 1071
Cdd:TIGR00606 554 ---------IKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKlNKELASLEQNKNHINNELESKEEQLSSY 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1072 HQEKIETLASlensrqtnEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEE 1151
Cdd:TIGR00606 625 EDKLFDVCGS--------QDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEF 696
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1152 NVKLAEELGRSRDEVTShqkLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDtsalITQKDEELEK 1231
Cdd:TIGR00606 697 ISDLQSKLRLAPDKLKS---TESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRD----IQRLKNDIEE 769
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1232 LRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQkLKAKSEqpltvtSPSGDIAANLLQDEsAEDKQQEIDFL 1311
Cdd:TIGR00606 770 QETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQ-QAAKLQ------GSDLDRTVQQVNQE-KQEKQHELDTV 841
|
730 740
....*....|....*....|.
gi 971420638 1312 NSVIVDLQRRNEELNLKIQRM 1332
Cdd:TIGR00606 842 VSKIELNRKLIQDQQEQIQHL 862
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
667-1242 |
3.79e-09 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 61.34 E-value: 3.79e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 667 EVTEEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQEAEIKVKE-LDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAA- 744
Cdd:pfam01576 5 EEMQAKEEELQKVKERQQKAESE-LKELEKKHQQLCEEKNALQEqLQAETELCAEAEEMRARLAARKQELEEILHELESr 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 745 ----------LQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLtkelqgkEQKLLDLEKNLSAVNQVKDS 814
Cdd:pfam01576 84 leeeeersqqLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLEKVTTEAKIKKL-------EEDILLLEDQNSKLSKERKL 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 815 LEKELQLLKEKFTSAVDGAENaqramqetINKLNQKEEqfalmsseleqlkSNLTVMETKLKEREEREQQLTEAKVKLEN 894
Cdd:pfam01576 157 LEERISEFTSNLAEEEEKAKS--------LSKLKNKHE-------------AMISDLEERLKKEEKGRQELEKAKRKLEG 215
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 895 DIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNV-EQTAQKAEqsQQETLKTHQEELKKMQDQ 973
Cdd:pfam01576 216 ESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIrELEAQISE--LQEDLESERAARNKAEKQ 293
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 974 LTDMKKQMET----------SQNQYKDLQAKYEKETS------------------EMITKHDADIKGFKQNLLDAEEALK 1025
Cdd:pfam01576 294 RRDLGEELEAlkteledtldTTAAQQELRSKREQEVTelkkaleeetrsheaqlqEMRQKHTQALEELTEQLEQAKRNKA 373
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1026 AAQKKNDELETQAEELK---KQAEQAKAD-----KRAEEVLQTMEKVTKEKDAIHQEKIETLAslensrqtneKLQNELD 1097
Cdd:pfam01576 374 NLEKAKQALESENAELQaelRTLQQAKQDsehkrKKLEGQLQELQARLSESERQRAELAEKLS----------KLQSELE 443
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1098 MLKQNNLKNEEELTK-SKELLNLENK--KVEELKKEFEALKLAAaqkSQQLAALQEENVKLAEELgrsRDEVTSHQKLEE 1174
Cdd:pfam01576 444 SVSSLLNEAEGKNIKlSKDVSSLESQlqDTQELLQEETRQKLNL---STRLRQLEDERNSLQEQL---EEEEEAKRNVER 517
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 971420638 1175 ERSVLNNQLLEMKKSLPsntlRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGE 1242
Cdd:pfam01576 518 QLSTLQAQLSDMKKKLE----EDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQE 581
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
805-1054 |
4.14e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 60.16 E-value: 4.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 805 LSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQ 884
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 885 LTEAKVKLENDIAEImkssgdssaqlmkmndeLRLKERQLEQIQLELTKANEKAVQLQKNVE--QTAQKAEQSQQETLKT 962
Cdd:COG4942 95 LRAELEAQKEELAEL-----------------LRALYRLGRQPPLALLLSPEDFLDAVRRLQylKYLAPARREQAEELRA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 963 HQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEmitkHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELK 1042
Cdd:COG4942 158 DLAELAALRAELEAERAELEALLAELEEERAALEALKAE----RQKLLARLEKELAELAAELAELQQEAEELEALIARLE 233
|
250
....*....|..
gi 971420638 1043 KQAEQAKADKRA 1054
Cdd:COG4942 234 AEAAAAAERTPA 245
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
497-899 |
6.34e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 60.84 E-value: 6.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 497 GRLESSKHIDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLD 576
Cdd:TIGR02168 671 SILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIA 750
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 577 HANKENSDvielwkskLESAIASHQQAMEELkvsfnkgvgaqTAEFAELKTQMEKVKLDYENEMSNLKLKQENEKSQHlK 656
Cdd:TIGR02168 751 QLSKELTE--------LEAEIEELEERLEEA-----------EEELAEAEAEIEELEAQIEQLKEELKALREALDELR-A 810
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 657 EIEALKAKLLEVTEEKEQTLENLKAKLESVEDqhlvemedtlnklQEAEIKVKELDVLQAkcneqTKLIGSLTQQIRASE 736
Cdd:TIGR02168 811 ELTLLNEEAANLRERLESLERRIAATERRLED-------------LEEQIEELSEDIESL-----AAEIEELEELIEELE 872
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 737 EKlldLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLEtekvggsskvsnltKELQGKEQKLLDLEKNLSAVNQVKDSLE 816
Cdd:TIGR02168 873 SE---LEALLNERASLEEALALLRSELEELSEELRELE--------------SKRSELRRELEELREKLAQLELRLEGLE 935
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 817 KELQLLKEKFtsavdgAENAQRAMQETINKLNQKEEQFALMSSELEQLKS--------NLTVME--TKLKER-EEREQQ- 884
Cdd:TIGR02168 936 VRIDNLQERL------SEEYSLTLEEAEALENKIEDDEEEARRRLKRLENkikelgpvNLAAIEeyEELKERyDFLTAQk 1009
|
410
....*....|....*..
gi 971420638 885 --LTEAKVKLENDIAEI 899
Cdd:TIGR02168 1010 edLTEAKETLEEAIEEI 1026
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
742-1334 |
8.58e-09 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 60.14 E-value: 8.58e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 742 LAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVS-------NLTKELQGKEQKLLDLEKNLSAVNQVKDS 814
Cdd:pfam05557 29 RIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALReqaelnrLKKKYLEALNKKLNEKESQLADAREVISC 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 815 LEKELQLLKEKftsavdgAENAQRAMQETINKLNQKEEQFALMS---SELEQLKSNLTVMETKLKEREEREQQLtEAKVK 891
Cdd:pfam05557 109 LKNELSELRRQ-------IQRAELELQSTNSELEELQERLDLLKakaSEAEQLRQNLEKQQSSLAEAEQRIKEL-EFEIQ 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 892 LENDIAEIMKssgDSSAQLMKMNDELRLKERQLEQI-QLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKM 970
Cdd:pfam05557 181 SQEQDSEIVK---NSKSELARIPELEKELERLREHNkHLNENIENKLLLKEEVEDLKRKLEREEKYREEAATLELEKEKL 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 971 QDQLTDMKK----------QMETSQNQYKDLQAKyEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEE 1040
Cdd:pfam05557 258 EQELQSWVKlaqdtglnlrSPEDLSRRIEQLQQR-EIVLKEENSSLTSSARQLEKARRELEQELAQYLKKIEDLNKKLKR 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1041 LKKQAEQAKADKRAeevlqtmekVTKEKDAIHQekietlaSLENSrqTNEKLQNELDMLKQNNLKNEEELTKSKELLNLE 1120
Cdd:pfam05557 337 HKALVRRLQRRVLL---------LTKERDGYRA-------ILESY--DKELTMSNYSPQLLERIEEAEDMTQKMQAHNEE 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1121 NK-KVEELKKEFEALKLAAAQKSQQLAALQEENvkLAEELGRSRDEVTS----HQKLEEERSVLNNQLLEMKKSLPSNTL 1195
Cdd:pfam05557 399 MEaQLSVAEEELGGYKQQAQTLERELQALRQQE--SLADPSYSKEEVDSlrrkLETLELERQRLREQKNELEMELERRCL 476
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1196 RESTLKKEIDeeraSLQKSISDTSALITQKDEELEKLRNEITVLRGENasaktlqsvvktlesdklkleekvknleQKLK 1275
Cdd:pfam05557 477 QGDYDPKKTK----VLHLSMNPAAEAYQQRKNQLEKLQAEIERLKRLL----------------------------KKLE 524
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*....
gi 971420638 1276 AKSEQPLTVTSPSGDIAanllqdesaedkqqeidflNSVIVDLQRRNEELNLKIQRMCE 1334
Cdd:pfam05557 525 DDLEQVLRLPETTSTMN-------------------FKEVLDLRKELESAELKNQRLKE 564
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
702-1289 |
1.95e-08 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 58.99 E-value: 1.95e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 702 QEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGS 781
Cdd:pfam07111 63 QQAELISRQLQELRRLEEEVRLLRETSLQQKMRLEAQAMELDALAVAEKAGQAEAEGLRAALAGAEMVRKNLEEGSQREL 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 782 SKVSNLTKE-LQGKEQKLldlEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSE 860
Cdd:pfam07111 143 EEIQRLHQEqLSSLTQAH---EEALSSLTSKAEGLEKSLNSLETKRAGEAKQLAEAQKEAELLRKQLSKTQEELEAQVTL 219
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 861 LEQLKSNL---TVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQL-EQIQ----LELT 932
Cdd:pfam07111 220 VESLRKYVgeqVPPEVHSQTWELERQELLDTMQHLQEDRADLQATVELLQVRVQSLTHMLALQEEELtRKIQpsdsLEPE 299
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 933 KANEKAVQLQKNVEQTAQKAEQSQQETLKtHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHdADIKG 1012
Cdd:pfam07111 300 FPKKCRSLLNRWREKVFALMVQLKAQDLE-HRDSVKQLRGQVAELQEQVTSQSQEQAILQRALQDKAAEVEVER-MSAKG 377
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1013 FKQNLLDAEEALKAAQKKNDELETQ---------AEELKKQAEQAKADKRAEEV-------------LQTMEKVTKEKDA 1070
Cdd:pfam07111 378 LQMELSRAQEARRRQQQQTASAEEQlkfvvnamsSTQIWLETTMTRVEQAVARIpslsnrlsyavrkVHTIKGLMARKVA 457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1071 IHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLE-NKKVEELKKEFEALKLAAAQKSQQLAALQ 1149
Cdd:pfam07111 458 LAQLRQESCPPPPPAPPVDADLSLELEQLREERNRLDAELQLSAHLIQQEvGRAREQGEAERQQLSEVAQQLEQELQRAQ 537
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1150 EENVKLAEELGRSR-------DEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRE--STLKKEIDEERASLQKS------ 1214
Cdd:pfam07111 538 ESLASVGQQLEVARqgqqestEEAASLRQELTQQQEIYGQALQEKVAEVETRLREqlSDTKRRLNEARREQAKAvvslrq 617
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 971420638 1215 ISDTSALITQKDEELEKLRNEitvlrGENASAKTLQSVVKTLESDKlKLEEKVKNLEQKLKAKSEQPLTVTSPSG 1289
Cdd:pfam07111 618 IQHRATQEKERNQELRRLQDE-----ARKEEGQRLARRVQELERDK-NLMLATLQQEGLLSRYKQQRLLAVLPSG 686
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
336-1005 |
2.24e-08 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 58.96 E-value: 2.24e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 336 LLTETSSRYARKISGTTALQEALKEKQQHIEQLLaERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDqlr 415
Cdd:pfam05483 159 LLKETCARSAEKTKKYEYEREETRQVYMDLNNNI-EKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKE--- 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 416 amVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEdpENVATVSEKSRIMELE-RDLALRVKEVAE 494
Cdd:pfam05483 235 --INDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQD--ENLKELIEKKDHLTKElEDIKMSLQRSMS 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 495 LRGRLESSKHIDdVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEiktlsasNERMGKENESLKTK 574
Cdd:pfam05483 311 TQKALEEDLQIA-TKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTE-------QQRLEKNEDQLKII 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 575 LDHANKENSDVIELWKSKlesaiASHQQAMEELKVsfnkgVGAQTAEFAELKTQMEKVKLDYENEMSNLK-LKQENEKSQ 653
Cdd:pfam05483 383 TMELQKKSSELEEMTKFK-----NNKEVELEELKK-----ILAEDEKLLDEKKQFEKIAEELKGKEQELIfLLQAREKEI 452
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 654 HLKEIEALKAKLLE---VTEEKEQTLENLKAKLESVEDQHLVEMEDTLNK--LQEAEIKVKELDVLQAKCNEQTKLIGSL 728
Cdd:pfam05483 453 HDLEIQLTAIKTSEehyLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKelTQEASDMTLELKKHQEDIINCKKQEERM 532
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 729 TQQIRASEEKLLDL--------AALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLD 800
Cdd:pfam05483 533 LKQIENLEEKEMNLrdelesvrEEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEE 612
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 801 LEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLnQKEEQFALMSSEleqlksnltvmetKLKEREE 880
Cdd:pfam05483 613 LHQENKALKKKGSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNY-QKEIEDKKISEE-------------KLLEEVE 678
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 881 REQQLTEAKVKLENDIaeimkssgdssaqlmkmndELRLKERQLEQIQL-ELTKANEKAVQLQKNVEQTAQKAEQSQQET 959
Cdd:pfam05483 679 KAKAIADEAVKLQKEI-------------------DKRCQHKIAEMVALmEKHKHQYDKIIEERDSELGLYKNKEQEQSS 739
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 971420638 960 LKTHQE-ELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITK 1005
Cdd:pfam05483 740 AKAALEiELSNIKAELLSLKKQLEIEKEEKEKLKMEAKENTAILKDK 786
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
914-1139 |
3.30e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 57.47 E-value: 3.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 914 NDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQE------TLKTHQEELKKMQDQLTDMKKQMETSQNQ 987
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRiaalarRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 988 YKDLQAKYEKETSEMITKHDADIKGF---KQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAkadkraEEVLQTMEKV 1064
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAEL------AALRAELEAE 172
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 971420638 1065 TKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAA 1139
Cdd:COG4942 173 RAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAG 247
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
871-1264 |
4.08e-08 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 57.92 E-value: 4.08e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 871 METKLKEREEREQQLTEAKVklENDIAEI--MKSSGDSSAQLMKMNDE-LRLKERQLEQIQLELTKANE--------KAV 939
Cdd:PRK04778 27 NYKRIDELEERKQELENLPV--NDELEKVkkLNLTGQSEEKFEEWRQKwDEIVTNSLPDIEEQLFEAEElndkfrfrKAK 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 940 QLQKNVEQTAQKAEQSQQETL----------KTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMitkhDAD 1009
Cdd:PRK04778 105 HEINEIESLLDLIEEDIEQILeelqelleseEKNREEVEQLKDLYRELRKSLLANRFSFGPALDELEKQLENL----EEE 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1010 IKGFKQ-----NLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRA--EEVLQTMEKVTKEKDAIHQEKIE-TLAS 1081
Cdd:PRK04778 181 FSQFVEltesgDYVEAREILDQLEEELAALEQIMEEIPELLKELQTELPDqlQELKAGYRELVEEGYHLDHLDIEkEIQD 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1082 LENSRQTNEKLQNELDM--LKQNNLKNEEELTKSKELLNLE---NKKVEELKKEFealklaaaqkSQQLAALQEENVKLA 1156
Cdd:PRK04778 261 LKEQIDENLALLEELDLdeAEEKNEEIQERIDQLYDILEREvkaRKYVEKNSDTL----------PDFLEHAKEQNKELK 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1157 EELGR-------SRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERASLqksisdtsaliTQKDEEL 1229
Cdd:PRK04778 331 EEIDRvkqsytlNESELESVRQLEKQLESLEKQYDEITERIAEQEIAYSELQEELEEILKQL-----------EEIEKEQ 399
|
410 420 430
....*....|....*....|....*....|....*.
gi 971420638 1230 EKLRNEITVLRGENASAK-TLQSVVKTLESDKLKLE 1264
Cdd:PRK04778 400 EKLSEMLQGLRKDELEAReKLERYRNKLHEIKRYLE 435
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
1400-1416 |
5.08e-08 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 49.77 E-value: 5.08e-08
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
755-1159 |
7.00e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 57.08 E-value: 7.00e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 755 EIQKLSEQLQAAEKQIQNLETekvggsskvsnLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLlkekftsavdgae 834
Cdd:COG4717 72 ELKELEEELKEAEEKEEEYAE-----------LQEELEELEEELEELEAELEELREELEKLEKLLQL------------- 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 835 naqramQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLEndiAEIMKSSGDSSAQLMKMN 914
Cdd:COG4717 128 ------LPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELE---ELLEQLSLATEEELQDLA 198
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 915 DELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAE-QSQQETLKTHQEELK------------------------- 968
Cdd:COG4717 199 EELEELQQRLAELEEELEEAQEELEELEEELEQLENELEaAALEERLKEARLLLLiaaallallglggsllsliltiagv 278
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 969 ---------KMQDQLTDMKKQMETSQNQYKDLQAKY---EKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELET 1036
Cdd:COG4717 279 lflvlgllaLLFLLLAREKASLGKEAEELQALPALEeleEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEE 358
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1037 QAEELKKQAEQAKADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLEN-SRQTNEKLQNELDMLKQNNLKN-EEELTKSK 1114
Cdd:COG4717 359 LEEELQLEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEElEEQLEELLGELEELLEALDEEElEEELEELE 438
|
410 420 430 440
....*....|....*....|....*....|....*....|....*..
gi 971420638 1115 ELLNLENKKVEELKKEFEALK--LAAAQKSQQLAALQEENVKLAEEL 1159
Cdd:COG4717 439 EELEELEEELEELREELAELEaeLEQLEEDGELAELLQELEELKAEL 485
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
977-1287 |
7.01e-08 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 57.06 E-value: 7.01e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 977 MKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEE 1056
Cdd:pfam17380 278 VQHQKAVSERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIRQEE 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1057 VLQTMEKVTKEKDAIHQEKIETLASLENSRQ-TNEKLQNELDMLKQNNLKNEEELTKSKELLNL--------ENKKVEEL 1127
Cdd:pfam17380 358 RKRELERIRQEEIAMEISRMRELERLQMERQqKNERVRQELEAARKVKILEEERQRKIQQQKVEmeqiraeqEEARQREV 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1128 K-------KEFEALKLAAAQKSQQLAAL-QEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLREST 1199
Cdd:pfam17380 438 RrleeeraREMERVRLEEQERQQQVERLrQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKRKL 517
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1200 LKKEIDEERASL----QKSISDTSALITQKDEELEKLRNEITVLRGEnasaktlQSVVKTLESDKLKLEEKVKNLEQKLK 1275
Cdd:pfam17380 518 LEKEMEERQKAIyeeeRRREAEEERRKQQEMEERRRIQEQMRKATEE-------RSRLEAMEREREMMRQIVESEKARAE 590
|
330
....*....|..
gi 971420638 1276 AKSEQPLTVTSP 1287
Cdd:pfam17380 591 YEATTPITTIKP 602
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
587-1047 |
7.43e-08 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 57.27 E-value: 7.43e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 587 ELWKSKleSAIASHQQAMEELkvsfnkgvgaqTAEFAELKTQMEKVKLDYENEMSNLKLKQE----NEKSQHLKE-IEAL 661
Cdd:COG3096 293 ELFGAR--RQLAEEQYRLVEM-----------ARELEELSARESDLEQDYQAASDHLNLVQTalrqQEKIERYQEdLEEL 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 662 KAKLlevtEEKEQTLENLKAKLESVEDQhlvemedtlnkLQEAEIKVKEL-----DVLQAKCNEQTKLIgSLTQQIRASE 736
Cdd:COG3096 360 TERL----EEQEEVVEEAAEQLAEAEAR-----------LEAAEEEVDSLksqlaDYQQALDVQQTRAI-QYQQAVQALE 423
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 737 E--KLLDLAALQKANSEGKLEiqklseQLQAAEKQIqnletekvggsskvsnltkelqgkEQKLLDLEKNLSAVNQVKDS 814
Cdd:COG3096 424 KarALCGLPDLTPENAEDYLA------AFRAKEQQA------------------------TEEVLELEQKLSVADAARRQ 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 815 LEKELQLLkEKFTSAVDGAENAQRAmQETINKLnqkeeqfalmsSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLEn 894
Cdd:COG3096 474 FEKAYELV-CKIAGEVERSQAWQTA-RELLRRY-----------RSQQALAQRLQQLRAQLAELEQRLRQQQNAERLLE- 539
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 895 diaEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQsqqetLKTHQEELKKMQDQL 974
Cdd:COG3096 540 ---EFCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKE-----LAARAPAWLAAQDAL 611
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 971420638 975 TDMKKQmetSQNQYKDLQakyeketsemitkhdaDIKGFKQNLLDAEEALKAAQkknDELETQAEELKKQAEQ 1047
Cdd:COG3096 612 ERLREQ---SGEALADSQ----------------EVTAAMQQLLEREREATVER---DELAARKQALESQIER 662
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
836-1192 |
7.99e-08 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 56.79 E-value: 7.99e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 836 AQRAMQETINKLNQKEEQFALMSSELEQLKsnltvmetklkereEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMND 915
Cdd:pfam06160 84 AKKALDEIEELLDDIEEDIKQILEELDELL--------------ESEEKNREEVEELKDKYRELRKTLLANRFSYGPAID 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 916 ELrlkERQLEQIQLELTKANEkavqlqknveqtaqkaEQSQQETLKTHqEELKKMQDQLTDMKKQMETSQNQYKDLQAKY 995
Cdd:pfam06160 150 EL---EKQLAEIEEEFSQFEE----------------LTESGDYLEAR-EVLEKLEEETDALEELMEDIPPLYEELKTEL 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 996 EKETSEMITKHDADI-KGFKQNLLDAEEALKAAQKKNDELETQAEELK-KQAEQA--KADKRAEEVLQTMEKVTKEKDAI 1071
Cdd:pfam06160 210 PDQLEELKEGYREMEeEGYALEHLNVDKEIQQLEEQLEENLALLENLElDEAEEAleEIEERIDQLYDLLEKEVDAKKYV 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1072 HQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELlnleNKKVEELKKEFEALKLAAAQKSQ-------- 1143
Cdd:pfam06160 290 EKNLPEIEDYLEHAEEQNKELKEELERVQQSYTLNENELERVRGL----EKQLEELEKRYDEIVERLEEKEVayselqee 365
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 971420638 1144 ------QLAALQEENVKLAEELGRSR-DEVTSHQKLEEERSVLNNQLLEMKKS-LPS 1192
Cdd:pfam06160 366 leeileQLEEIEEEQEEFKESLQSLRkDELEAREKLDEFKLELREIKRLVEKSnLPG 422
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
823-1354 |
1.23e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 56.67 E-value: 1.23e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 823 KEKFTSAVDGAENAQRAMQETINKLNQ-KEEQFALMSSELEQLKSNLTVMETK------LKEREEREQQltEAKVKLEND 895
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNElHEKQKFYLRQSVIDLQTKLQEMQMErdamadIRRRESQSQE--DLRNQLQNT 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 896 IAEI----------MKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQ-QETLKTHQ 964
Cdd:pfam15921 151 VHELeaakclkedmLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTMHFRSLGSAiSKILRELD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 965 EELKKMQDQLTDMKKQMET----SQNQYKDLQAKYEKETSEMITKHDADIKGFKqnlldaeEALKAAQKKNDELETQAEE 1040
Cdd:pfam15921 231 TEISYLKGRIFPVEDQLEAlkseSQNKIELLLQQHQDRIEQLISEHEVEITGLT-------EKASSARSQANSIQSQLEI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1041 LKKQAeqakadkraeevlqtmekvtKEKDAIHQEKIETLASlensrqTNEKLQNELDMLKQNNLKNEEELTKSkelLNLE 1120
Cdd:pfam15921 304 IQEQA--------------------RNQNSMYMRQLSDLES------TVSQLRSELREAKRMYEDKIEELEKQ---LVLA 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1121 NKKVEELKKEFEalklaaaQKSQQLAALQEENVKLAEELGRSRDEVTshqkLEEERsvlNNQLLEMKKSlpsNTLRESTL 1200
Cdd:pfam15921 355 NSELTEARTERD-------QFSQESGNLDDQLQKLLADLHKREKELS----LEKEQ---NKRLWDRDTG---NSITIDHL 417
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1201 KKEIDEERASLQKSisdTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQ 1280
Cdd:pfam15921 418 RRELDDRNMEVQRL---EALLKAMKSECQGQMERQMAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESS 494
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 971420638 1281 PLTVTspsgDIAANLlqdesaEDKQQEIDFLNSVIVDLQRRneeLNLKIQRMceAALNGNEEETINYDSEEEGL 1354
Cdd:pfam15921 495 ERTVS----DLTASL------QEKERAIEATNAEITKLRSR---VDLKLQEL--QHLKNEGDHLRNVQTECEAL 553
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
378-901 |
2.10e-07 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 55.68 E-value: 2.10e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 378 EVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEAADR--EKVELLNQLEEEKRKVE-DLQFRVEEESITKG 454
Cdd:PRK01156 198 ELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNElsSLEDMKNRYESEIKTAEsDLSMELEKNNYYKE 277
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 455 DLERKRQIsedpENVATVSEKSRIME---LERDLALRVKEVAELRGRLESskhIDDVDTSLSLLQEISSLQEKMAAAGKE 531
Cdd:PRK01156 278 LEERHMKI----INDPVYKNRNYINDyfkYKNDIENKKQILSNIDAEINK---YHAIIKKLSVLQKDYNDYIKKKSRYDD 350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 532 HQREMSSLKEkFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELWKSKLESaIASHQQAMEELKVSF 611
Cdd:PRK01156 351 LNNQILELEG-YEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAIKKELNE-INVKLQDISSKVSSL 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 612 NKGVGAQTAEFAELKTQME---------------------KVKLDYENEMSNLKLK---QENEKSQHLKEIEALKAKLLE 667
Cdd:PRK01156 429 NQRIRALRENLDELSRNMEmlngqsvcpvcgttlgeeksnHIINHYNEKKSRLEEKireIEIEVKDIDEKIVDLKKRKEY 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 668 VTEEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQEAEIKVKELD---------VLQAKCNEQTKLIgsltqqiraSEEK 738
Cdd:PRK01156 509 LESEEINKSINEYNKIESARAD-LEDIKIKINELKDKHDKYEEIKnrykslkleDLDSKRTSWLNAL---------AVIS 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 739 LLDLAALQKANSEgkleiqkLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQgKEQKLLDLEKNLSavnQVKDSLEKE 818
Cdd:PRK01156 579 LIDIETNRSRSNE-------IKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIE-NEANNLNNKYNEI---QENKILIEK 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 819 LQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAE 898
Cdd:PRK01156 648 LRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDINETLES 727
|
...
gi 971420638 899 IMK 901
Cdd:PRK01156 728 MKK 730
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
754-1277 |
2.34e-07 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 55.68 E-value: 2.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 754 LEIQKLSEQLQAAEKQIQNLETekvgGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGA 833
Cdd:PRK01156 159 LEINSLERNYDKLKDVIDMLRA----EISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDY 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 834 ENAQramqETINKLNQKEEQFALMSSELEQLKSNLTVME---TKLKEREEREQQLTEAKV-KLENDIAEIMKSSGD---- 905
Cdd:PRK01156 235 NNLK----SALNELSSLEDMKNRYESEIKTAESDLSMELeknNYYKELEERHMKIINDPVyKNRNYINDYFKYKNDienk 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 906 -------------------SSAQLMKMNDELRLKERQLEQIQ---LELTKANEKAVQLQKNVEQTAQKAEQsqqetlktH 963
Cdd:PRK01156 311 kqilsnidaeinkyhaiikKLSVLQKDYNDYIKKKSRYDDLNnqiLELEGYEMDYNSYLKSIESLKKKIEE--------Y 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 964 QEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITK---HDADIKGFKQNLLDAEEALK--------------- 1025
Cdd:PRK01156 383 SKNIERMSAFISEILKIQEIDPDAIKKELNEINVKLQDISSKvssLNQRIRALRENLDELSRNMEmlngqsvcpvcgttl 462
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1026 AAQKKNDELETQAEELKKQAEQA-KADKRAEEVLQTMEKVTKEKDAIHQEKIETLAS----LENSRQTNEKLQNELDMLK 1100
Cdd:PRK01156 463 GEEKSNHIINHYNEKKSRLEEKIrEIEIEVKDIDEKIVDLKKRKEYLESEEINKSINeynkIESARADLEDIKIKINELK 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1101 QNNLKNEE--ELTKSKELLNLENKKVEELKK-------EFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSH-Q 1170
Cdd:PRK01156 543 DKHDKYEEikNRYKSLKLEDLDSKRTSWLNAlavisliDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSiR 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1171 KLEEERSVLNNQLLEMK-KSLPSNTLREST--LKKEIdEERASLQKSISDTSALITQKDEELEKLRNEitvLRGENASAK 1247
Cdd:PRK01156 623 EIENEANNLNNKYNEIQeNKILIEKLRGKIdnYKKQI-AEIDSIIPDLKEITSRINDIEDNLKKSRKA---LDDAKANRA 698
|
570 580 590
....*....|....*....|....*....|
gi 971420638 1248 TLQSVVKTLESDKLKLEEKVKNLEQKLKAK 1277
Cdd:PRK01156 699 RLESTIEILRTRINELSDRINDINETLESM 728
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
462-1230 |
3.88e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 54.84 E-value: 3.88e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 462 ISEDPENVATVSEKSRiMELERDLALRVKEVAELRGRLESSKHIDDVDTSLSLLQEISSLQEKMaaagKEHQREMSSLKE 541
Cdd:pfam12128 205 ILEDDGVVPPKSRLNR-QQVEHWIRDIQAIAGIMKIRPEFTKLQQEFNTLESAELRLSHLHFGY----KSDETLIASRQE 279
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 542 KFESSEEALRKEIKTLSAS-NERMGKENESLKT-KLDHANKENS-DVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQ 618
Cdd:pfam12128 280 ERQETSAELNQLLRTLDDQwKEKRDELNGELSAaDAAVAKDRSElEALEDQHGAFLDADIETAAADQEQLPSWQSELENL 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 619 TAEFAELKTQMEKVKLDYENEMSNLKlkqenekSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTL 698
Cdd:pfam12128 360 EERLKALTGKHQDVTAKYNRRRSKIK-------EQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQALESELREQLEAGK 432
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 699 NKLQEAEIKVK----ELDVLQAkcneqtkligsltqQIRASEEKLLDLAALQKansegklEIQKLSEQLQAAEKQIQNLE 774
Cdd:pfam12128 433 LEFNEEEYRLKsrlgELKLRLN--------------QATATPELLLQLENFDE-------RIERAREEQEAANAEVERLQ 491
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 775 TEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQV-------------------KDSLEKEL---QLLKEKFTSAVDG 832
Cdd:pfam12128 492 SELRQARKRRDQASEALRQASRRLEERQSALDELELQlfpqagtllhflrkeapdwEQSIGKVIspeLLHRTDLDPEVWD 571
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 833 AENAQR-------------------AMQETI---------------NKLNQKEEQFALMSSELEQLKSNLTVMETKLKER 878
Cdd:pfam12128 572 GSVGGElnlygvkldlkridvpewaASEEELrerldkaeealqsarEKQAAAEEQLVQANGELEKASREETFARTALKNA 651
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 879 EEREQQLT----EAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQ-LEQIQLEL-----------------TKANE 936
Cdd:pfam12128 652 RLDLRRLFdekqSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAwLEEQKEQKreartekqaywqvvegaLDAQL 731
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 937 KAVQLQKNVEQTAQKAEQSQQETlkTHQEELKKM---QDQLTDMKKQMETSQNQYKDLqAKYEKETSEMITKHDADIKGF 1013
Cdd:pfam12128 732 ALLKAAIAARRSGAKAELKALET--WYKRDLASLgvdPDVIAKLKREIRTLERKIERI-AVRRQEVLRYFDWYQETWLQR 808
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1014 KQNLLDAEEALKAAQKK-NDELETQAEELKKQAEQAKADKRAEEVLQTM--EKVTKEKDaiHQEKIETLASLENSRQTNE 1090
Cdd:pfam12128 809 RPRLATQLSNIERAISElQQQLARLIADTKLRRAKLEMERKASEKQQVRlsENLRGLRC--EMSKLATLKEDANSEQAQG 886
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1091 KLQNELDMLKQNNLKNE-EELTKSKELLNLEN----KKVEELKKEFEALKLAAAQKSQQLAALQEEN--VKLAEELGRSR 1163
Cdd:pfam12128 887 SIGERLAQLEDLKLKRDyLSESVKKYVEHFKNviadHSGSGLAETWESLREEDHYQNDKGIRLLDYRklVPYLEQWFDVR 966
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 971420638 1164 DEvTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERASLQK--SISDTSALITQKDEELE 1230
Cdd:pfam12128 967 VP-QSIMVLREQVSILGVDLTEFYDVLADFDRRIASFSRELQREVGEEAFfeGVSESAVRIRSKVSELE 1034
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
714-1233 |
5.99e-07 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 54.42 E-value: 5.99e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 714 LQAKCNEQTKLIGSlTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETekvggsskvSNLTKELQG 793
Cdd:PRK10246 225 LQVLTDEEKQLLTA-QQQQQQSLNWLTRLDELQQEASRRQQALQQALAAEEKAQPQLAALSL---------AQPARQLRP 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 794 KEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQ---KEEQFALMSSELEQLKSNLTV 870
Cdd:PRK10246 295 HWERIQEQSAALAHTRQQIEEVNTRLQSTMALRARIRHHAAKQSAELQAQQQSLNTwlaEHDRFRQWNNELAGWRAQFSQ 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 871 METKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMkmndELRLKERQLEQiqlELTKANEKAVQLQKNVEQTaq 950
Cdd:PRK10246 375 QTSDREQLRQWQQQLTHAEQKLNALPAITLTLTADEVAAAL----AQHAEQRPLRQ---RLVALHGQIVPQQKRLAQL-- 445
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 951 kaeqsqQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKEtsEMItkhdADIKGFKQNL------------- 1017
Cdd:PRK10246 446 ------QVAIQNVTQEQTQRNAALNEMRQRYKEKTQQLADVKTICEQE--ARI----KDLEAQRAQLqagqpcplcgsts 513
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1018 ---LDAEEALK--AAQKKNDELETQAEELKKQAEQ--------AKADKRAEEVLQTMekvTKEKDAIHQEKIETLASLEN 1084
Cdd:PRK10246 514 hpaVEAYQALEpgVNQSRLDALEKEVKKLGEEGAAlrgqldalTKQLQRDESEAQSL---RQEEQALTQQWQAVCASLNI 590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1085 SRQTNEKLQNELDMLKQnnlkNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEE------ 1158
Cdd:PRK10246 591 TLQPQDDIQPWLDAQEE----HERQLRLLSQRHELQGQIAAHNQQIIQYQQQIEQRQQQLLTALAGYALTLPQEdeeasw 666
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1159 LGRSRDEVTSHQKLEEERSVLNNQLLEMKKSL----PSNTLRESTLKKEIDEERASLQKSISDTSALIT-QKDEELEKLR 1233
Cdd:PRK10246 667 LATRQQEAQSWQQRQNELTALQNRIQQLTPLLetlpQSDDLPHSEETVALDNWRQVHEQCLSLHSQLQTlQQQDVLEAQR 746
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1013-1241 |
6.76e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 54.15 E-value: 6.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1013 FKQNLLD---AEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVTKEKDaiHQEKIETLASLENSRQTN 1089
Cdd:COG4913 213 VREYMLEepdTFEAADALVEHFDDLERAHEALEDAREQIELLEPIRELAERYAAARERLA--ELEYLRAALRLWFAQRRL 290
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1090 EKLQNELDmlkqnnlKNEEELTKSKELLNLENKKVEELKKEFEALKLA-AAQKSQQLAALQEENVKLAEELGRSRDEvts 1168
Cdd:COG4913 291 ELLEAELE-------ELRAELARLEAELERLEARLDALREELDELEAQiRGNGGDRLEQLEREIERLERELEERERR--- 360
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 971420638 1169 HQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRG 1241
Cdd:COG4913 361 RARLEALLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLER 433
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1025-1154 |
8.36e-07 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 53.24 E-value: 8.36e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1025 KAAQKKNDELETQAEELKKQAE-QAKADKRaEEVLQTMEKVTKEKDAIHQE---KIETLASLENS-RQTNEKLQNELDML 1099
Cdd:PRK12704 27 KIAEAKIKEAEEEAKRILEEAKkEAEAIKK-EALLEAKEEIHKLRNEFEKElreRRNELQKLEKRlLQKEENLDRKLELL 105
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 971420638 1100 KqnnlKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVK 1154
Cdd:PRK12704 106 E----KREEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISGLTAEEAK 156
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
762-962 |
9.04e-07 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 52.91 E-value: 9.04e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 762 QLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQ 841
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARALY 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 842 ETINKLNQKEeqFALMSSELEQLKSNLTVMET-------KLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMN 914
Cdd:COG3883 97 RSGGSVSYLD--VLLGSESFSDFLDRLSALSKiadadadLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELE 174
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 971420638 915 DELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKT 962
Cdd:COG3883 175 AQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAA 222
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
786-1050 |
1.09e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 53.10 E-value: 1.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 786 NLTKELQGKEQKLLD----LEKNLSaVNQVKDSlekelQLLKEKFTSavdgaENAQRAmQETINKL------NQKEEQFA 855
Cdd:COG3206 104 NLDEDPLGEEASREAaierLRKNLT-VEPVKGS-----NVIEISYTS-----PDPELA-AAVANALaeayleQNLELRRE 171
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 856 LMSSELEQLKSNLTVMETKLKEREEREQQLTEAK--VKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTK 933
Cdd:COG3206 172 EARKALEFLEEQLPELRKELEEAEAALEEFRQKNglVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGS 251
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 934 ANEKAVQLQKNVEQTAQKAEQSQQETlkthqeELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGF 1013
Cdd:COG3206 252 GPDALPELLQSPVIQQLRAQLAELEA------ELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRILASLEAELEAL 325
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 971420638 1014 KQN---LLDAEEALKAAQKKNDELETQAEELKKQAEQAKA 1050
Cdd:COG3206 326 QAReasLQAQLAQLEARLAELPELEAELRRLEREVEVARE 365
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
467-1275 |
1.14e-06 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 53.52 E-value: 1.14e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 467 ENVATVSEKSRIMELERDLALRVKEVAELRGRLESSKH---------IDDVDTSLS--LLQEISSLQEKMAAAGKEHQRE 535
Cdd:TIGR01612 480 DIKKDIDENSKQDNTVKLILMRMKDFKDIIDFMELYKPdevpskniiGFDIDQNIKakLYKEIEAGLKESYELAKNWKKL 559
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 536 MSSLKEKFESSEE---ALRKEIKTLSASNERMGKEN---ESLKTKLDHANKENSDVIELWKS--KLESAIASHQQAMEEL 607
Cdd:TIGR01612 560 IHEIKKELEEENEdsiHLEKEIKDLFDKYLEIDDEIiyiNKLKLELKEKIKNISDKNEYIKKaiDLKKIIENNNAYIDEL 639
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 608 -KVS---FNKGVGAQTAEFAELKTQMEKVkldYENEMSNLKlkqeNEKSQHLKEiealkaKLLEVTEEKEQtLENLKAKL 683
Cdd:TIGR01612 640 aKISpyqVPEHLKNKDKIYSTIKSELSKI---YEDDIDALY----NELSSIVKE------NAIDNTEDKAK-LDDLKSKI 705
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 684 ESVEDQhLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEkllDLAALQKANSEGKLEIQKLSEQL 763
Cdd:TIGR01612 706 DKEYDK-IQNMETATVELHLSNIENKKNELLDIIVEIKKHIHGEINKDLNKILE---DFKNKEKELSNKINDYAKEKDEL 781
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 764 QAAEKQIQNLETEkVGGSSKVSNlTKELQGKE--QKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQ 841
Cdd:TIGR01612 782 NKYKSKISEIKNH-YNDQINIDN-IKDEDAKQnyDKSKEYIKTISIKEDEIFKIINEMKFMKDDFLNKVDKFINFENNCK 859
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 842 EtinKLNQKEEQFALMSSELEQlksnltvmETKLKEREEREQQLTEAKvKLENDIAEIMKSSGDSSAQLMKMNDELRLKE 921
Cdd:TIGR01612 860 E---KIDSEHEQFAELTNKIKA--------EISDDKLNDYEKKFNDSK-SLINEINKSIEEEYQNINTLKKVDEYIKICE 927
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 922 RQLEQIQLELTKANEKAVQLQKNVEQTaqkaeqsqQETLKTHQEELKKMQDQLTDMKKQMETSqnqYKDLQ-AKYEKETS 1000
Cdd:TIGR01612 928 NTKESIEKFHNKQNILKEILNKNIDTI--------KESNLIEKSYKDKFDNTLIDKINELDKA---FKDASlNDYEAKNN 996
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1001 EMITKHDadikGFKQNLLDAEEALKAAQkkNDELETQAEELKKQAEQA-KADKRAEEVLQT-MEKVTKEKDAIHQEKIET 1078
Cdd:TIGR01612 997 ELIKYFN----DLKANLGKNKENMLYHQ--FDEKEKATNDIEQKIEDAnKNIPNIEIAIHTsIYNIIDEIEKEIGKNIEL 1070
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1079 L---------ASLENSRQTNEKLQ--NELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKlaaaQKSQQLAa 1147
Cdd:TIGR01612 1071 LnkeileeaeINITNFNEIKEKLKhyNFDDFGKEENIKYADEINKIKDDIKNLDQKIDHHIKALEEIK----KKSENYI- 1145
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1148 lqeenvklaeelgrsrDEVTSH-QKLEE--ERSVLNNQLLEMKKSLpSNTLRESTLKKEIDEERASLQKSISDtsalITQ 1224
Cdd:TIGR01612 1146 ----------------DEIKAQiNDLEDvaDKAISNDDPEEIEKKI-ENIVTKIDKKKNIYDEIKKLLNEIAE----IEK 1204
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|.
gi 971420638 1225 KDEELEKLRNeITVLRGENASAKTLQSVvktlESDKLKLEEKVKNLEQKLK 1275
Cdd:TIGR01612 1205 DKTSLEEVKG-INLSYGKNLGKLFLEKI----DEEKKKSEHMIKAMEAYIE 1250
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
411-1002 |
1.19e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.12 E-value: 1.19e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 411 MDQLRAMVEA-ADREKVELLNQLEEEKRKVEDLQFRVEEESI----TKGDLERKrqISEDPENVATVSE-KSRIMELERD 484
Cdd:PRK02224 189 LDQLKAQIEEkEEKDLHERLNGLESELAELDEEIERYEEQREqareTRDEADEV--LEEHEERREELETlEAEIEDLRET 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 485 LALRVKEVAELRGRLESSKhiddvDTSLSLLQEISSLQEKmAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERM 564
Cdd:PRK02224 267 IAETEREREELAEEVRDLR-----ERLEELEEERDDLLAE-AGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAH 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 565 GKENESLKTKLDHANKENSDVIELwKSKLESAIASHQQAMEELKVSfnkgVGAQTAEFAELKTQMEKVKLDYENEMSNLK 644
Cdd:PRK02224 341 NEEAESLREDADDLEERAEELREE-AAELESELEEAREAVEDRREE----IEELEEEIEELRERFGDAPVDLGNAEDFLE 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 645 LKQEN--EKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKL--ESVEDQ-HLVEMEDTLNKLQEAEIKVKELDVLQAKCN 719
Cdd:PRK02224 416 ELREErdELREREAELEATLRTARERVEEAEALLEAGKCPEcgQPVEGSpHVETIEEDRERVEELEAELEDLEEEVEEVE 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 720 EQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLL 799
Cdd:PRK02224 496 ERLERAEDLVEAEDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVA 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 800 DLEKNLSAVNQVKDSLEKELQLLKEkftsavdgAENAQramqETINKLNQKEEQFALMSSELEQlksnltvmetKLKERE 879
Cdd:PRK02224 576 ELNSKLAELKERIESLERIRTLLAA--------IADAE----DEIERLREKREALAELNDERRE----------RLAEKR 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 880 EREQQLtEAKVKlENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLqknveqtaqkaeqsqqet 959
Cdd:PRK02224 634 ERKREL-EAEFD-EARIEEAREDKERAEEYLEQVEEKLDELREERDDLQAEIGAVENELEEL------------------ 693
|
570 580 590 600
....*....|....*....|....*....|....*....|...
gi 971420638 960 lkthqEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEM 1002
Cdd:PRK02224 694 -----EELRERREALENRVEALEALYDEAEELESMYGDLRAEL 731
|
|
| AAA_13 |
pfam13166 |
AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA ... |
424-819 |
1.28e-06 |
|
AAA domain; This family of domains contain a P-loop motif that is characteriztic of the AAA superfamily. Many of the proteins in this family are conjugative transfer proteins. This family includes the PrrC protein that is thought to be the active component of the anticodon nuclease.
Pssm-ID: 463796 [Multi-domain] Cd Length: 712 Bit Score: 53.14 E-value: 1.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 424 EKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEDP-ENVATVSEKSRIMEL--ERDLALRVKEVAELRGRLE 500
Cdd:pfam13166 90 ESIEIQEKIAKLKKEIKDHEEKLDAAEANLQKLDKEKEKLEADfLDECWKKIKRKKNSAlsEALNGFKYEANFKSRLLRE 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 501 SSKHIDDVDTSLSLlqeiSSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNErmGKENESLKTKLDHAN- 579
Cdd:pfam13166 170 IEKDNFNAGVLLSD----EDRKAALATVFSDNKPEIAPLTFNVIDFDALEKAEILIQKVIGK--SSAIEELIKNPDLADw 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 580 --------KENSDVIELWKSKLESAIAshqqamEELKVSFNKgvgaqtaEFAELKTQMEKVKLDYENEMSNL--KLKQEN 649
Cdd:pfam13166 244 veqglelhKAHLDTCPFCGQPLPAERK------AALEAHFDD-------EFTEFQNRLQKLIEKVESAISSLlaQLPAVS 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 650 EKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQ--HLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGS 727
Cdd:pfam13166 311 DLASLLSAFELDVEDIESEAEVLNSQLDGLRRALEAKRKDpfKSIELDSVDAKIESINDLVASINELIAKHNEITDNFEE 390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 728 LTQQIRASEEKLLdlaalqkaNSEGKLEIQKLSEQLQAAEKQIQNLETEKvggsskvSNLTKELQGKEQKLLDLEKNLSA 807
Cdd:pfam13166 391 EKNKAKKKLRLHL--------VEEFKSEIDEYKDKYAGLEKAINSLEKEI-------KNLEAEIKKLREEIKELEAQLRD 455
|
410
....*....|..
gi 971420638 808 VNQVKDSLEKEL 819
Cdd:pfam13166 456 HKPGADEINKLL 467
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
353-993 |
1.56e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 52.73 E-value: 1.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 353 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlvrdghdrHVLEMEAKMDQLRAMVEAADREKVELLNQL 432
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERRE--------ELETLEAEIEDLRETIAETEREREELAEEV 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 433 EEEKRKVEDLQfrvEEESITKGDLERKrqiSEDPENVATVSE--KSRIMELERDLALRVKEVAELRGRLES-SKHIDDVD 509
Cdd:PRK02224 282 RDLRERLEELE---EERDDLLAEAGLD---DADAEAVEARREelEDRDEELRDRLEECRVAAQAHNEEAESlREDADDLE 355
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 510 TslsllqEISSLQEKMAAAGKEHQREMSSLkEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELW 589
Cdd:PRK02224 356 E------RAEELREEAAELESELEEAREAV-EDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRERE 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 590 KSkLESAIASHQQAMEELKVSFNKGVGAQTAefaelktqmekvkldyenemsnlklkQENEKSQHLKEIEALKAKLLEVT 669
Cdd:PRK02224 429 AE-LEATLRTARERVEEAEALLEAGKCPECG--------------------------QPVEGSPHVETIEEDRERVEELE 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 670 EEkeqtLENLKAKLESVEDQHlvemeDTLNKLQEAEIKVKELDvlqakcnEQTKLIGSLTQQIRASeeklldlaalqkan 749
Cdd:PRK02224 482 AE----LEDLEEEVEEVEERL-----ERAEDLVEAEDRIERLE-------ERREDLEELIAERRET-------------- 531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 750 segkleIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEkftsa 829
Cdd:PRK02224 532 ------IEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELKERIESLERIRTLLAA----- 600
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 830 vdgAENAqramQETINKLNQKEEQFALMSSELEQlksnltvmetKLKEREEREQQLtEAKVKlENDIAEimkssgdssAQ 909
Cdd:PRK02224 601 ---IADA----EDEIERLREKREALAELNDERRE----------RLAEKRERKREL-EAEFD-EARIEE---------AR 652
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 910 LMKMNdelrlKERQLEQIQLELTKANEKAVQLQKNVeqTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYK 989
Cdd:PRK02224 653 EDKER-----AEEYLEQVEEKLDELREERDDLQAEI--GAVENELEELEELRERREALENRVEALEALYDEAEELESMYG 725
|
....
gi 971420638 990 DLQA 993
Cdd:PRK02224 726 DLRA 729
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
949-1177 |
1.64e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 52.07 E-value: 1.64e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 949 AQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKyeketsemITKHDADIKGFKQNLLDAEEALKAAQ 1028
Cdd:COG4942 19 ADAAAEAEAE-LEQLQQEIAELEKELAALKKEEKALLKQLAALERR--------IAALARRIRALEQELAALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1029 KKNDELETQAEELKKQ-AEQAKADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTN----EKLQNELDMLKQNN 1103
Cdd:COG4942 90 KEIAELRAELEAQKEElAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQaeelRADLAELAALRAEL 169
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 971420638 1104 LKNEEELTKSKELLNLENKKVEELKKEFEALklaAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERS 1177
Cdd:COG4942 170 EAERAELEALLAELEEERAALEALKAERQKL---LARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
943-1273 |
1.75e-06 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 52.72 E-value: 1.75e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 943 KNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYE-------------KETSEMITKHDAD 1009
Cdd:TIGR04523 25 KNIANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKIKileqqikdlndklKKNKDKINKLNSD 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1010 IKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQ-----AEQAKADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLEN 1084
Cdd:TIGR04523 105 LSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNidkflTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLN 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1085 SRQTNEKLQNE----------LDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVK 1154
Cdd:TIGR04523 185 IQKNIDKIKNKllklelllsnLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNK 264
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1155 LAEELGRSRDEVTSHQK----LEEERSVLNNQLLEMKKSLPSNTLRE-STLKKEIDEERASLQKSISDTSALITQKDEEL 1229
Cdd:TIGR04523 265 IKKQLSEKQKELEQNNKkikeLEKQLNQLKSEISDLNNQKEQDWNKElKSELKNQEKKLEEIQNQISQNNKIISQLNEQI 344
|
330 340 350 360
....*....|....*....|....*....|....*....|....*...
gi 971420638 1230 EKLRNEITVLRGENASAKT----LQSVVKTLESDKLKLEEKVKNLEQK 1273
Cdd:TIGR04523 345 SQLKKELTNSESENSEKQReleeKQNEIEKLKKENQSYKQEIKNLESQ 392
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
842-1237 |
2.06e-06 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 52.61 E-value: 2.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 842 ETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMND------ 915
Cdd:PRK11281 46 DALNKQKLLEAEDKLVQQDLEQTLALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLStlslrq 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 916 -ELRLKER--QLEQIQLELTKANEKAVQLQKNVEQtAQKA-EQSQQETlkthqEELKKMQDQLTDMKKQMETSQnqykdl 991
Cdd:PRK11281 126 lESRLAQTldQLQNAQNDLAEYNSQLVSLQTQPER-AQAAlYANSQRL-----QQIRNLLKGGKVGGKALRPSQ------ 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 992 QAKYEKETSEMITKHDadikgFKQNLLDAEEALKA-AQKKNDELETQAEELKKQAE---QAKADKRAEEVLQTMEKVTKE 1067
Cdd:PRK11281 194 RVLLQAEQALLNAQND-----LQRKSLEGNTQLQDlLQKQRDYLTARIQRLEHQLQllqEAINSKRLTLSEKTVQEAQSQ 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1068 KDAihqekietlasleNSRQTNEKLQNELDmlkqNNLKNEEELTKSKELLNlenkkveelkkefealklaaaqksqqlaA 1147
Cdd:PRK11281 269 DEA-------------ARIQANPLVAQELE----INLQLSQRLLKATEKLN----------------------------T 303
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1148 LQEENVKLAEELgrsrDEVT-SHQKLEEERSVLNNQLL------EMKKSLPSNTLRESTLKK---------EIDEERASL 1211
Cdd:PRK11281 304 LTQQNLRVKNWL----DRLTqSERNIKEQISVLKGSLLlsrilyQQQQALPSADLIEGLADRiadlrleqfEINQQRDAL 379
|
410 420 430
....*....|....*....|....*....|.
gi 971420638 1212 qksiSDTSALI-----TQKDEELEKLRNEIT 1237
Cdd:PRK11281 380 ----FQPDAYIdkleaGHKSEVTDEVRDALL 406
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
669-889 |
2.28e-06 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 52.33 E-value: 2.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 669 TEEKEQTLENLKAKLESVEDQhlvemedtlnkLQEAEIKVKELdvlqakcnEQTKLIGSLTQQIRASEEKLldlAALQKA 748
Cdd:COG3206 170 REEARKALEFLEEQLPELRKE-----------LEEAEAALEEF--------RQKNGLVDLSEEAKLLLQQL---SELESQ 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 749 NSEGKLEIQKLSEQLQAAEKQIQNLETE--KVGGSSKVSNLTKELQGKEQKLLDLEKNLSA-----------VNQVKDSL 815
Cdd:COG3206 228 LAEARAELAEAEARLAALRAQLGSGPDAlpELLQSPVIQQLRAQLAELEAELAELSARYTPnhpdvialraqIAALRAQL 307
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 971420638 816 EKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAK 889
Cdd:COG3206 308 QQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLLQRLEEARLAE 381
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
676-1153 |
4.23e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 51.31 E-value: 4.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 676 LENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKL------LDLAALQKAN 749
Cdd:COG4717 48 LERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELeelreeLEKLEKLLQL 127
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 750 SEGKLEIQKLSEQLQAAEKQIQNLETEKvggsskvsnltKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEK-FTS 828
Cdd:COG4717 128 LPLYQELEALEAELAELPERLEELEERL-----------EELRELEEELEELEAELAELQEELEELLEQLSLATEEeLQD 196
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 829 AVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKV-------KLENDIAEIMK 901
Cdd:COG4717 197 LAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALlallglgGSLLSLILTIA 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 902 SSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQM 981
Cdd:COG4717 277 GVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREA 356
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 982 ETSQNQYKdlQAKYEKETSEMITKHDADikgfkqnllDAEEALKAAQKKNdeletQAEELKKQAEQAKADKRAEEVLQTM 1061
Cdd:COG4717 357 EELEEELQ--LEELEQEIAALLAEAGVE---------DEEELRAALEQAE-----EYQELKEELEELEEQLEELLGELEE 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1062 EKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQ--NNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAA 1139
Cdd:COG4717 421 LLEALDEEELEEELEELEEELEELEEELEELREELAELEAelEQLEEDGELAELLQELEELKAELRELAEEWAALKLALE 500
|
490
....*....|....
gi 971420638 1140 QKSQQLAALQEENV 1153
Cdd:COG4717 501 LLEEAREEYREERL 514
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
851-1086 |
5.15e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 51.45 E-value: 5.15e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 851 EEQFALMSSELEQLKSnltvMETKLKEREEREQQLTEAKvklenDIAEIMKSSGDSSAQLMKMNDELRL--KERQLEQIQ 928
Cdd:COG4913 224 FEAADALVEHFDDLER----AHEALEDAREQIELLEPIR-----ELAERYAAARERLAELEYLRAALRLwfAQRRLELLE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 929 LELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEketsemitKHDA 1008
Cdd:COG4913 295 AELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRA--------RLEA 366
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 971420638 1009 DIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEvlqtmEKVTKEKDAIHQEkietLASLENSR 1086
Cdd:COG4913 367 LLAALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAAL-----RDLRRELRELEAE----IASLERRK 435
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
357-505 |
5.16e-06 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 51.01 E-value: 5.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 357 ALKEKQQHIEQLLAE---RDLERAEVAKATS-----------HVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEAAD 422
Cdd:COG2433 347 AYKNKFERVEKKVPPdvdRDEVKARVIRGLSieealeeliekELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLE 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 423 REKVELLNQLEEEKRKVEDLQFRVEEESItkgdlERKRQISEDPEnvaTVSEKSRIMELERDLALRVKEVAELRGRLESS 502
Cdd:COG2433 427 AEVEELEAELEEKDERIERLERELSEARS-----EERREIRKDRE---ISRLDREIERLERELEEERERIEELKRKLERL 498
|
...
gi 971420638 503 KHI 505
Cdd:COG2433 499 KEL 501
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1202-1332 |
5.77e-06 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 51.01 E-value: 5.77e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1202 KEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASaktlqsvvktLESDKLKLEEKVKNLEQKLK-AKSEQ 1280
Cdd:COG2433 388 KELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEE----------LEAELEEKDERIERLERELSeARSEE 457
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 971420638 1281 PltvtspsgdiaANLLQDESAEDKQQEIDFLNSVIVDLQRRNEELNLKIQRM 1332
Cdd:COG2433 458 R-----------REIRKDREISRLDREIERLERELEEERERIEELKRKLERL 498
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
858-1333 |
6.25e-06 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 50.89 E-value: 6.25e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 858 SSELEQLKSNLTVMETKLKeREEREQQltEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEK 937
Cdd:pfam05557 1 RAELIESKARLSQLQNEKK-QMELEHK--RARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALREQAEL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 938 AVQLQKNVEQTAQKAEQSQQETLKTHqEELKKMQDQLTDMKKQMETSQNQYKDLQAKYE--KETSEMITKHDADIKGFKQ 1015
Cdd:pfam05557 78 NRLKKKYLEALNKKLNEKESQLADAR-EVISCLKNELSELRRQIQRAELELQSTNSELEelQERLDLLKAKASEAEQLRQ 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1016 NLLDAEEALKAAQKKNDELEtqaEELKKQAEQAKADKRAEEVLQTMEKVTKEKDAIHQEKietlASLENSRQTNEKLQNE 1095
Cdd:pfam05557 157 NLEKQQSSLAEAEQRIKELE---FEIQSQEQDSEIVKNSKSELARIPELEKELERLREHN----KHLNENIENKLLLKEE 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1096 LDMLKQNnLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQK-------SQQLAALQEENVKLAEELG----RSRD 1164
Cdd:pfam05557 230 VEDLKRK-LEREEKYREEAATLELEKEKLEQELQSWVKLAQDTGLNlrspedlSRRIEQLQQREIVLKEENSsltsSARQ 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1165 EVTSHQKLEEERSVLNNQLLEMKKSLPSNT-------LRESTLKKEIDEERASLQK-----SISDTSALITQKDEELEKL 1232
Cdd:pfam05557 309 LEKARRELEQELAQYLKKIEDLNKKLKRHKalvrrlqRRVLLLTKERDGYRAILESydkelTMSNYSPQLLERIEEAEDM 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1233 RNEITVLRGEnasaktLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSgdiaanllQDESAEDKQQEIDFLN 1312
Cdd:pfam05557 389 TQKMQAHNEE------MEAQLSVAEEELGGYKQQAQTLERELQALRQQESLADPSY--------SKEEVDSLRRKLETLE 454
|
490 500
....*....|....*....|.
gi 971420638 1313 SVIVDLQRRNEELNLKIQRMC 1333
Cdd:pfam05557 455 LERQRLREQKNELEMELERRC 475
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
830-1190 |
6.68e-06 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 51.11 E-value: 6.68e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 830 VDGAENAQRAMQETINKLNQKEEQFALMSSELEQLksnltvmetklkerEEREQQLTEakvklENDIAeimkssgdsSAQ 909
Cdd:COG3096 284 SERALELRRELFGARRQLAEEQYRLVEMARELEEL--------------SARESDLEQ-----DYQAA---------SDH 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 910 LMKMNDELRLKERqLEQIQLELTKANEKAVQLQKNVEQtAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQN--- 986
Cdd:COG3096 336 LNLVQTALRQQEK-IERYQEDLEELTERLEEQEEVVEE-AAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTrai 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 987 QYKD-LQAKyeKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQ---AEELKKQAEQA-------------- 1048
Cdd:COG3096 414 QYQQaVQAL--EKARALCGLPDLTPENAEDYLAAFRAKEQQATEEVLELEQKlsvADAARRQFEKAyelvckiagevers 491
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1049 KADKRAEEVLQT---MEKVTKEKDAIHQEKIEtLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVE 1125
Cdd:COG3096 492 QAWQTARELLRRyrsQQALAQRLQQLRAQLAE-LEQRLRQQQNAERLLEEFCQRIGQQLDAAEELEELLAELEAQLEELE 570
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1126 ELKKEFEALKLAAAQKSQQLAALQEEN--------------VKLAEELGR---SRDEVTSH--QKLEEER--SVLNNQLL 1184
Cdd:COG3096 571 EQAAEAVEQRSELRQQLEQLRARIKELaarapawlaaqdalERLREQSGEalaDSQEVTAAmqQLLEREReaTVERDELA 650
|
....*.
gi 971420638 1185 EMKKSL 1190
Cdd:COG3096 651 ARKQAL 656
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
958-1176 |
7.73e-06 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 50.68 E-value: 7.73e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 958 ETLKTHQEELKKMQDQLTDMKKQMET------SQNQYKDLQAKYEkETSEMITKHDADIKGFKQNLLDAE-----EALKA 1026
Cdd:COG4913 228 DALVEHFDDLERAHEALEDAREQIELlepireLAERYAAARERLA-ELEYLRAALRLWFAQRRLELLEAEleelrAELAR 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1027 AQKKNDELETQAEELKKQAEQAKADKRAE--EVLQTMEKVTKEKDAIHQEKIETLASLENS-RQTNEKLQNELDMLKQNN 1103
Cdd:COG4913 307 LEAELERLEARLDALREELDELEAQIRGNggDRLEQLEREIERLERELEERERRRARLEALlAALGLPLPASAEEFAALR 386
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 971420638 1104 LKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEER 1176
Cdd:COG4913 387 AEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDALAEALGLDEAE 459
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
515-957 |
1.07e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.15 E-value: 1.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 515 LQEISSLQEKMAAAGKEHQ--REMSSLKEKFESSEEALRKEIKTLSASNERMGK--ENESLKTKLDHANKENSDVIELWK 590
Cdd:COG4717 70 LKELKELEEELKEAEEKEEeyAELQEELEELEEELEELEAELEELREELEKLEKllQLLPLYQELEALEAELAELPERLE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 591 sKLESAIASHQQAMEELKvsfnkgvgAQTAEFAELKTQMEkvklDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTE 670
Cdd:COG4717 150 -ELEERLEELRELEEELE--------ELEAELAELQEELE----ELLEQLSLATEEELQDLAEELEELQQRLAELEEELE 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 671 EKEQTLENLKAKLESVEDQHlvEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGS------------------LTQQI 732
Cdd:COG4717 217 EAQEELEELEEELEQLENEL--EAAALEERLKEARLLLLIAAALLALLGLGGSLLSLiltiagvlflvlgllallFLLLA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 733 RASEEKLLDLAALQKANSEGKLEIQKLSEQLqaaeKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLsAVNQVK 812
Cdd:COG4717 295 REKASLGKEAEELQALPALEELEEEELEELL----AALGLPPDLSPEELLELLDRIEELQELLREAEELEEEL-QLEELE 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 813 DSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSEL---------EQLKSNLTVMETKLKEREEREQ 883
Cdd:COG4717 370 QEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELeellealdeEELEEELEELEEELEELEEELE 449
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 971420638 884 QLTEAKVKLENDIAEIMkssgdSSAQLMKMNDELRLKERQLEqiqlELTKANEKAVQLQKNVEQTAQKAEQSQQ 957
Cdd:COG4717 450 ELREELAELEAELEQLE-----EDGELAELLQELEELKAELR----ELAEEWAALKLALELLEEAREEYREERL 514
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
423-1129 |
1.09e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 50.44 E-value: 1.09e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 423 REKVELLNQLEEEKRKVEDLQfrveeESITKGDLERKRQISEDPENVATVSEKSRIMELERdLALRVKEVAELRGRLES- 501
Cdd:TIGR01612 1304 REKSLKIIEDFSEESDINDIK-----KELQKNLLDAQKHNSDINLYLNEIANIYNILKLNK-IKKIIDEVKEYTKEIEEn 1377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 502 SKHI-DDVDTSLSLLQEIsslqekmaaagkehqREMSSLKE---KFESS--EEALRKEIKTLSASNERMGKENESLKTKL 575
Cdd:TIGR01612 1378 NKNIkDELDKSEKLIKKI---------------KDDINLEEcksKIESTldDKDIDECIKKIKELKNHILSEESNIDTYF 1442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 576 DHANKENSDVIELW--------------KSKLESAIASHQQAMEELKVSFNKGVGAQTaEFAELKTQMEKVKLDYE---- 637
Cdd:TIGR01612 1443 KNADENNENVLLLFkniemadnksqhilKIKKDNATNDHDFNINELKEHIDKSKGCKD-EADKNAKAIEKNKELFEqykk 1521
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 638 ------NEMSNLKLKQ-----ENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQhlVEMEDTLNK------ 700
Cdd:TIGR01612 1522 dvtellNKYSALAIKNkfaktKKDSEIIIKEIKDAHKKFILEAEKSEQKIKEIKKEKFRIEDD--AAKNDKSNKaaidiq 1599
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 701 --LQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRA----SEEKLLdlaalqKANSEGKLEIQKLSEQLQAAEKQIQNLE 774
Cdd:TIGR01612 1600 lsLENFENKFLKISDIKKKINDCLKETESIEKKISSfsidSQDTEL------KENGDNLNSLQEFLESLKDQKKNIEDKK 1673
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 775 TEKVGGSSKVSNLTKELQ--------GKEQKLLDLEK-NLSAVNQVKDSLEKELQLLKEKFTS----AVDGAENAQRAMQ 841
Cdd:TIGR01612 1674 KELDELDSEIEKIEIDVDqhkknyeiGIIEKIKEIAIaNKEEIESIKELIEPTIENLISSFNTndleGIDPNEKLEEYNT 1753
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 842 ETINKLNQKEEQFALMSSELEQL-KSNLTVMETKlkereereqqltEAKVKLENDIAEIMKSSGDSSAQLmkmnDELRLK 920
Cdd:TIGR01612 1754 EIGDIYEEFIELYNIIAGCLETVsKEPITYDEIK------------NTRINAQNEFLKIIEIEKKSKSYL----DDIEAK 1817
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 921 E--RQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSqQETLKTHQEE--LKKMQDQLTDMKKQM-ETSQNQYKDLQAKY 995
Cdd:TIGR01612 1818 EfdRIINHFKKKLDHVNDKFTKEYSKINEGFDDISKS-IENVKNSTDEnlLFDILNKTKDAYAGIiGKKYYSYKDEAEKI 1896
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 996 EKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVTKEKDAIHQEK 1075
Cdd:TIGR01612 1897 FINISKLANSINIQIQNNSGIDLFDNINIAILSSLDSEKEDTLKFIPSPEKEPEIYTKIRDSYDTLLDIFKKSQDLHKKE 1976
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*..
gi 971420638 1076 IETLASLENSRQTNEKLQ--NEL-DMLKQNNLKNEEELTKSKELLNlenkKVEELKK 1129
Cdd:TIGR01612 1977 QDTLNIIFENQQLYEKIQasNELkDTLSDLKYKKEKILNDVKLLLH----KFDELNK 2029
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
635-1280 |
1.12e-05 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 50.08 E-value: 1.12e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 635 DYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKA----KLESVEDQHLVEMEDTLNKLQEAEIKVKE 710
Cdd:COG5022 814 SYLACIIKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRfsllKKETIYLQSAQRVELAERQLQELKIDVKS 893
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 711 LDVLQAKCNEQTKLIGSLTQQIRAS-----EEKLLDLAALQKANSEGKLEIQKLSEQlqaaekqiqnletekvggsskvs 785
Cdd:COG5022 894 ISSLKLVNLELESEIIELKKSLSSDlienlEFKTELIARLKKLLNNIDLEEGPSIEY----------------------- 950
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 786 nltkELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLK 865
Cdd:COG5022 951 ----VKLPELNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKNFKKELAELSKQYGALQESTKQLKELPVEVA 1026
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 866 SNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMN-DELRLKERQLEQIQLELTKANEKAVQLQ-K 943
Cdd:COG5022 1027 ELQSASKIISSESTELSILKPLQKLKGLLLLENNQLQARYKALKLRRENsLLDDKQLYQLESTENLLKTINVKDLEVTnR 1106
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 944 NVEQTAQKAE--QSQQETLKTHQEELKKMQDQLTDMKKqmetSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAE 1021
Cdd:COG5022 1107 NLVKPANVLQfiVAQMIKLNLLQEISKFLSQLVNTLEP----VFQKLSVLQLELDGLFWEANLEALPSPPPFAALSEKRL 1182
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1022 EALKAAQKKNDELETQAEELKKQAEqAKADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQ 1101
Cdd:COG5022 1183 YQSALYDEKSKLSSSEVNDLKNELI-ALFSKIFSGWPRGDKLKKLISEGWVPTEYSTSLKGFNNLNKKFDTPASMSNEKL 1261
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1102 NNLKNE-EELTKSKELL-NLENKKVEELKKE-----FEALKLAAAQKSQQLAALQEENVKLAEELgrsrdevtshqKLEE 1174
Cdd:COG5022 1262 LSLLNSiDNLLSSYKLEeEVLPATINSLLQYinvglFNALRTKASSLRWKSATEVNYNSEELDDW-----------CREF 1330
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1175 ERSVLNNQLLEMKKSLPSNTLRESTLKKeIDEERASLQksisdtsaliTQKDEELEKLRNEITVLRGENasaKTLQSVVK 1254
Cdd:COG5022 1331 EISDVDEELEELIQAVKVLQLLKDDLNK-LDELLDACY----------SLNPAEIQNLKSRYDPADKEN---NLPKEILK 1396
|
650 660
....*....|....*....|....*..
gi 971420638 1255 TLESDKLKLEEKVKNLE-QKLKAKSEQ 1280
Cdd:COG5022 1397 KIEALLIKQELQLSLEGkDETEVHLSE 1423
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
932-1324 |
1.13e-05 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 50.01 E-value: 1.13e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 932 TKANEKAVQLQKNVEQTAQKAEQSQQETLKthqeelKKMQDQLTDMKKQMETSQNQY----KDLQAKYEKE-TSEMITKH 1006
Cdd:NF033838 50 SSGNESQKEHAKEVESHLEKILSEIQKSLD------KRKHTQNVALNKKLSDIKTEYlyelNVLKEKSEAElTSKTKKEL 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1007 DADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKK--------------QAEQAKAD---KRAE-EVLQTMEKVTKEK 1068
Cdd:NF033838 124 DAAFEQFKKDTLEPGKKVAEATKKVEEAEKKAKDQKEedrrnyptntyktlELEIAESDvevKKAElELVKEEAKEPRDE 203
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1069 DAIHQEKIETLAS------LENSRQTNEKLQNELDMLKQNNLKNEEEltksKELLNLENKKVEELKKEFEALKLAAAQKS 1142
Cdd:NF033838 204 EKIKQAKAKVESKkaeatrLEKIKTDREKAEEEAKRRADAKLKEAVE----KNVATSEQDKPKRRAKRGVLGEPATPDKK 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1143 QQLAALQEENVklAEE------LGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLResTLKKEIDEERASLQKsis 1216
Cdd:NF033838 280 ENDAKSSDSSV--GEEtlpspsLKPEKKVAEAEKKVEEAKKKAKDQKEEDRRNYPTNTYK--TLELEIAESDVKVKE--- 352
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1217 dtsALITQKDEELEKLRNE--ITVLRGENASAKTLQSVVKTLESDKLKLEEKVKN---LEQKLKAK-SEQPLTVTSPSGD 1290
Cdd:NF033838 353 ---AELELVKEEAKEPRNEekIKQAKAKVESKKAEATRLEKIKTDRKKAEEEAKRkaaEEDKVKEKpAEQPQPAPAPQPE 429
|
410 420 430
....*....|....*....|....*....|....
gi 971420638 1291 IAANLLQDESAEDKQQEIDfLNSVIVDLQRRNEE 1324
Cdd:NF033838 430 KPAPKPEKPAEQPKAEKPA-DQQAEEDYARRSEE 462
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
641-889 |
1.18e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 49.38 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 641 SNLKLKQENEKSQHLKEIEALKAKLlevtEEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQeaeikvKELDVLQAKCNE 720
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKEL----AALKKEEKALLKQLAALERR-IAALARRIRALE------QELAALEAELAE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 721 QTKLIGSLTQQIRASEEKLLD-LAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEkvggSSKVSNLTKELQGKEQKLL 799
Cdd:COG4942 88 LEKEIAELRAELEAQKEELAElLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYL----APARREQAEELRADLAELA 163
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 800 DLEKNLSAVNQVKDSLEKELQLLKEKFtsavdgaENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKERE 879
Cdd:COG4942 164 ALRAELEAERAELEALLAELEEERAAL-------EALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEA 236
|
250
....*....|
gi 971420638 880 EREQQLTEAK 889
Cdd:COG4942 237 AAAAERTPAA 246
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
427-855 |
1.18e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.77 E-value: 1.18e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 427 ELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQisedpeNVATVSEKSRIMELERDLALRVKEVAELRGRLESSkhID 506
Cdd:COG4717 75 ELEEELKEAEEKEEEYAELQEELEELEEELEELEA------ELEELREELEKLEKLLQLLPLYQELEALEAELAEL--PE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 507 DVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVi 586
Cdd:COG4717 147 RLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEEL- 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 587 elwKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFAELKTQMEKVKLDYENE----------MSNLKLKQENEKSQHLK 656
Cdd:COG4717 226 ---EEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIagvlflvlglLALLFLLLAREKASLGK 302
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 657 EIEALKAkLLEVTEEKEQTLENLKAKL---ESVEDQHLVEMEDTLNKLQEAEIKVKELDvLQAKCNEQTKLIGSLTQQIR 733
Cdd:COG4717 303 EAEELQA-LPALEELEEEELEELLAALglpPDLSPEELLELLDRIEELQELLREAEELE-EELQLEELEQEIAALLAEAG 380
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 734 A-SEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGgsskvSNLTKELQGKEQKLLDLEKNLSAVNQVK 812
Cdd:COG4717 381 VeDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDE-----EELEEELEELEEELEELEEELEELREEL 455
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 971420638 813 DSLEKELQLLKEKftsavDGAENAQRAMQETINKLNQKEEQFA 855
Cdd:COG4717 456 AELEAELEQLEED-----GELAELLQELEELKAELRELAEEWA 493
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1044-1247 |
1.34e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 1.34e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1044 QAEQAKADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKK 1123
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1124 VEELKKEFEALkLAAAQKSQQ----------------------LAALQEENVKLAEELGRSRDEVTS-HQKLEEERSVLN 1180
Cdd:COG4942 99 LEAQKEELAEL-LRALYRLGRqpplalllspedfldavrrlqyLKYLAPARREQAEELRADLAELAAlRAELEAERAELE 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 971420638 1181 NQLLEMKKSLpsntLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAK 1247
Cdd:COG4942 178 ALLAELEEER----AALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
530-686 |
1.50e-05 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 49.64 E-value: 1.50e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 530 KEHQREMSSLKEKFE---SSEEALRKEIKTLSASNERM---GKENESLKTKLDHANKENSDVIELWK------SKLESAI 597
Cdd:pfam05667 331 QQREEELEELQEQLEdleSSIQELEKEIKKLESSIKQVeeeLEELKEQNEELEKQYKVKKKTLDLLPdaeeniAKLQALV 410
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 598 ASHQQAMEELKVSFNKGVGAQTAEFAELKTQmekvkldyenemsnlKLKQENEKSQHLKEIEALKAKLLEVTEE---KEQ 674
Cdd:pfam05667 411 DASAQRLVELAGQWEKHRVPLIEEYRALKEA---------------KSNKEDESQRKLEEIKELREKIKEVAEEakqKEE 475
|
170
....*....|..
gi 971420638 675 TLENLKAKLESV 686
Cdd:pfam05667 476 LYKQLVAEYERL 487
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
356-830 |
1.51e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 49.38 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 356 EALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHvlEMEAKMDQLRAMVEAADREKVELLNQLEEE 435
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLL--PLYQELEALEAELAELPERLEELEERLEEL 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 436 KRKVEDLQFRVEEESITKGDLERKRQISEDPENVATVSEKSRIMELERDLALRVKEVAELRGRLESSKH-IDDVDTSLSL 514
Cdd:COG4717 159 RELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEeLEQLENELEA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 515 LQEISSLQEKM-----AAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANkensdvielw 589
Cdd:COG4717 239 AALEERLKEARlllliAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQ---------- 308
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 590 ksKLESAIASHQQAMEELKVSFNKGVGAQTAEFAELKTQMEKVKldyenemsnlklkqeneksQHLKEIEALKAKLLEVT 669
Cdd:COG4717 309 --ALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQ-------------------ELLREAEELEEELQLEE 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 670 EEKEQTLENLKAKLESVEdqhlvEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRAS--EEKLLDLAALQK 747
Cdd:COG4717 368 LEQEIAALLAEAGVEDEE-----ELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEelEEELEELEEELE 442
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 748 ANSEgklEIQKLSEQLQAAEKQIQNLETEKvggssKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFT 827
Cdd:COG4717 443 ELEE---ELEELREELAELEAELEQLEEDG-----ELAELLQELEELKAELRELAEEWAALKLALELLEEAREEYREERL 514
|
...
gi 971420638 828 SAV 830
Cdd:COG4717 515 PPV 517
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
587-1047 |
1.55e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 49.96 E-value: 1.55e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 587 ELWKSKleSAIASHQQAMEELKvsfnkgvgaqtAEFAELKTQMEKVKLDYENEMSNLKLKQENEKSQhlKEIEALKAKLL 666
Cdd:PRK04863 294 ELYTSR--RQLAAEQYRLVEMA-----------RELAELNEAESDLEQDYQAASDHLNLVQTALRQQ--EKIERYQADLE 358
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 667 EVTEEkeqtlenLKAKLESVEDQHLvEMEDTLNKLQEAEIKVKEL-----DVLQAKCNEQTKLIgSLTQQIRASEE--KL 739
Cdd:PRK04863 359 ELEER-------LEEQNEVVEEADE-QQEENEARAEAAEEEVDELksqlaDYQQALDVQQTRAI-QYQQAVQALERakQL 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 740 LDLAALQKANSEGKLEiqklseQLQAAEKQIqnletekvggsskvsnltkelqgkEQKLLDLEKNLSAVNQVKDSLEKEL 819
Cdd:PRK04863 430 CGLPDLTADNAEDWLE------EFQAKEQEA------------------------TEELLSLEQKLSVAQAAHSQFEQAY 479
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 820 QLLKekftsAVDGAENAQRAMQETINKLNQKEEQFALmSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEi 899
Cdd:PRK04863 480 QLVR-----KIAGEVSRSEAWDVARELLRRLREQRHL-AEQLQQLRMRLSELEQRLRQQQRAERLLAEFCKRLGKNLDD- 552
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 900 mkssgdssaqlmkmndelrlkERQLEQIQLEltkanekavqlqknveqtaqkaeqsQQETLKTHQEELKKMQDQLTDMKK 979
Cdd:PRK04863 553 ---------------------EDELEQLQEE-------------------------LEARLESLSESVSEARERRMALRQ 586
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 980 QMETSQNQYKDL----------QAKYEK---------ETSEMITkhdadikGFKQNLLdaeEALKAAQKKNDELETQAEE 1040
Cdd:PRK04863 587 QLEQLQARIQRLaarapawlaaQDALARlreqsgeefEDSQDVT-------EYMQQLL---ERERELTVERDELAARKQA 656
|
....*..
gi 971420638 1041 LKKQAEQ 1047
Cdd:PRK04863 657 LDEEIER 663
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
737-1042 |
1.73e-05 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 49.24 E-value: 1.73e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 737 EKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETekvggsskvsnltkelQGKEQKllDLEKNLSAVNQVkdsle 816
Cdd:PHA02562 157 EDLLDISVLSEMDKLNKDKIRELNQQIQTLDMKIDHIQQ----------------QIKTYN--KNIEEQRKKNGE----- 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 817 kELQLLKEKFTSAVDGAENAqramqetinklnqkeeqfalmSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDI 896
Cdd:PHA02562 214 -NIARKQNKYDELVEEAKTI---------------------KAEIEELTDELLNLVMDIEDPSAALNKLNTAAAKIKSKI 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 897 AEIMKssgdssaqLMKM---NDELRLKERQLEQIQLELTKANEKAVQLQKNVEQ--TAQKAEQSQQETLKTHQEELKKMQ 971
Cdd:PHA02562 272 EQFQK--------VIKMyekGGVCPTCTQQISEGPDRITKIKDKLKELQHSLEKldTAIDELEEIMDEFNEQSKKLLELK 343
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 971420638 972 DQLTDMKKQMETSQNQYKDLQAKYEKETSEMITkHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELK 1042
Cdd:PHA02562 344 NKISTNKQSLITLVDKAKKVKAAIEELQAEFVD-NAEELAKLQDELDKIVKTKSELVKEKYHRGIVTDLLK 413
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
751-1116 |
2.22e-05 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 48.80 E-value: 2.22e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 751 EGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKE--QKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTS 828
Cdd:COG5185 189 LKGISELKKAEPSGTVNSIKESETGNLGSESTLLEKAKEIINIEEalKGFQDPESELEDLAQTSDKLEKLVEQNTDLRLE 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 829 AVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKS--NLTVMETKLKEREEREQQLTEAKVKLENDI----AEIMKS 902
Cdd:COG5185 269 KLGENAESSKRLNENANNLIKQFENTKEKIAEYTKSIDikKATESLEEQLAAAEAEQELEESKRETETGIqnltAEIEQG 348
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 903 SGDSSAQLMKMNDE---------LRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQ 973
Cdd:COG5185 349 QESLTENLEAIKEEienivgeveLSKSSEELDSFKDTIESTKESLDEIPQNQRGYAQEILATLEDTLKAADRQIEELQRQ 428
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 974 LTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKgfkqnlldaeealKAAQKKNDELETQAEELKKQAEQAKAdkr 1053
Cdd:COG5185 429 IEQATSSNEEVSKLLNELISELNKVMREADEESQSRLE-------------EAYDEINRSVRSKKEDLNEELTQIES--- 492
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 971420638 1054 aeEVLQTMEKVTKEKDAIhQEKIETLASLENsrQTNEKLQNELDMLKQNNLKNEEELTKSKEL 1116
Cdd:COG5185 493 --RVSTLKATLEKLRAKL-ERQLEGVRSKLD--QVAESLKDFMRARGYAHILALENLIPASEL 550
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
742-902 |
2.26e-05 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 47.61 E-value: 2.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 742 LAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKD--SLEKEL 819
Cdd:COG1579 19 LDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNNKEyeALQKEI 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 820 QLLKEKftsavdgAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLtvmETKLKEREEREQQLTEAKVKLENDIAEI 899
Cdd:COG1579 99 ESLKRR-------ISDLEDEILELMERIEELEEELAELEAELAELEAEL---EEKKAELDEELAELEAELEELEAEREEL 168
|
...
gi 971420638 900 MKS 902
Cdd:COG1579 169 AAK 171
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
617-855 |
2.32e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 2.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 617 AQTAEFAELKTQMEKVKldyenemsnlklKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQhLVEMED 696
Cdd:COG4942 17 AQADAAAEAEAELEQLQ------------QEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQE-LAALEA 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 697 TLNKLQeaeikvKELDVLQAKCNEQTKLIGSLTQQI----RASEEKLL-----------DLAALQKANSEGKLEIQKLSE 761
Cdd:COG4942 84 ELAELE------KEIAELRAELEAQKEELAELLRALyrlgRQPPLALLlspedfldavrRLQYLKYLAPARREQAEELRA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 762 QLQAAEKQIQNLETEKvggsskvSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEkftsAVDGAENAQRAMQ 841
Cdd:COG4942 158 DLAELAALRAELEAER-------AELEALLAELEEERAALEALKAERQKLLARLEKELAELAA----ELAELQQEAEELE 226
|
250
....*....|....
gi 971420638 842 ETINKLNQKEEQFA 855
Cdd:COG4942 227 ALIARLEAEAAAAA 240
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1023-1268 |
2.36e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 2.36e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1023 ALKAAQKKNDELETQAEELkkqaeqakadkraEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQN 1102
Cdd:COG4942 11 LALAAAAQADAAAEAEAEL-------------EQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQE 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1103 NLKNEEELTKSKELLNLENKKVEELKKEFEALkLAAAQKSQQLAAL-----QEENVKLAEELGRSRDEVTSHQKLEEERS 1177
Cdd:COG4942 78 LAALEAELAELEKEIAELRAELEAQKEELAEL-LRALYRLGRQPPLalllsPEDFLDAVRRLQYLKYLAPARREQAEELR 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1178 VLNNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRgenASAKTLQSVVKTLE 1257
Cdd:COG4942 157 ADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQ---QEAEELEALIARLE 233
|
250
....*....|.
gi 971420638 1258 SDKLKLEEKVK 1268
Cdd:COG4942 234 AEAAAAAERTP 244
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
915-1095 |
3.00e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.90 E-value: 3.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 915 DELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKD-LQA 993
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAE-LEALQAEIDKLQAEIAEAEAEIEERREELGErARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 994 KYEKETS-----------------------EMITKHDAD-IKGFKQNLLDAEEALKAAQKKNDELETQAEEL-------- 1041
Cdd:COG3883 95 LYRSGGSvsyldvllgsesfsdfldrlsalSKIADADADlLEELKADKAELEAKKAELEAKLAELEALKAELeaakaele 174
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 971420638 1042 KKQAEQAKADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNE 1095
Cdd:COG3883 175 AQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAA 228
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
630-1348 |
3.01e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 48.89 E-value: 3.01e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 630 EKVKLDYENEMSNLKLKQEnEKSQHLKEIEALKAKLLEVTEEKEQtLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVk 709
Cdd:TIGR00606 301 EQLNDLYHNHQRTVREKER-ELVDCQRELEKLNKERRLLNQEKTE-LLVEQGRLQLQADRHQEHIRARDSLIQSLATRL- 377
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 710 ELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALqkansegkleIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTK 789
Cdd:TIGR00606 378 ELDGFERGPFSERQIKNFHTLVIERQEDEAKTAAQL----------CADLQSKERLKQEQADEIRDEKKGLGRTIELKKE 447
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 790 ELQGKEQKLLDLEKNL-SAVNQVKDSLEKELQLLK-EKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQlksn 867
Cdd:TIGR00606 448 ILEKKQEELKFVIKELqQLEGSSDRILELDQELRKaERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQE---- 523
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 868 ltvMETKLKEREEREQQLTEAKVKLEND--IAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNV 945
Cdd:TIGR00606 524 ---MEQLNHHTTTRTQMEMLTKDKMDKDeqIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKEL 600
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 946 EQTAQKAEQSQQEtLKTHQEELKKMQDQLTD-------------MKKQMETSQNQYKDLQAK---YEKETSEMITKHDAD 1009
Cdd:TIGR00606 601 ASLEQNKNHINNE-LESKEEQLSSYEDKLFDvcgsqdeesdlerLKEEIEKSSKQRAMLAGAtavYSQFITQLTDENQSC 679
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1010 IKGFKQNLLDAEEALKAAQKKNDELETQAEELKK-QAEQAKADKRAEEVLQTMEKVTKEKDAIHQEkietlasLENSRQT 1088
Cdd:TIGR00606 680 CPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKStESELKKKEKRRDEMLGLAPGRQSIIDLKEKE-------IPELRNK 752
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1089 NEKLQNELDMLKQNNLKNEEEL------TKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAA---------LQEENV 1153
Cdd:TIGR00606 753 LQKVNRDIQRLKNDIEEQETLLgtimpeEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGsdldrtvqqVNQEKQ 832
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1154 KLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLREST---LKKEIDEERASLQKSISDTSALITQKDEELE 1230
Cdd:TIGR00606 833 EKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTnlqRRQQFEEQLVELSTEVQSLIREIKDAKEQDS 912
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1231 KLRNEITVLRGENasaktlQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSGDiaanlLQDESAEDKQQEIDF 1310
Cdd:TIGR00606 913 PLETFLEKDQQEK------EELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQD-----GKDDYLKQKETELNT 981
|
730 740 750
....*....|....*....|....*....|....*...
gi 971420638 1311 LNSVIVDLQRRNEELNLKIQRMCEAALNGNEEETINYD 1348
Cdd:TIGR00606 982 VNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQD 1019
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
1033-1285 |
4.47e-05 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 47.93 E-value: 4.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1033 ELETQAEELKKQAEQAK--ADKRAEEVL-QTMEKVTKEKDAIHQEKIETLA---SLENSRQ------TNEKLQNELDMLK 1100
Cdd:PLN03229 433 ELEGEVEKLKEQILKAKesSSKPSELALnEMIEKLKKEIDLEYTEAVIAMGlqeRLENLREefskanSQDQLMHPVLMEK 512
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1101 QNNLKNE--EELTKSKELLNLENKKveELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSrdEVtsHQKLEEERSV 1178
Cdd:PLN03229 513 IEKLKDEfnKRLSRAPNYLSLKYKL--DMLNEFSRAKALSEKKSKAEKLKAEINKKFKEVMDRP--EI--KEKMEALKAE 586
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1179 LNNQLLEMKKSLPSNTLRE-STLKKEIDEERASLQKSISDTSALITQKD-------------EELEKLRNEITVLRGENA 1244
Cdd:PLN03229 587 VASSGASSGDELDDDLKEKvEKMKKEIELELAGVLKSMGLEVIGVTKKNkdtaeqtpppnlqEKIESLNEEINKKIERVI 666
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 971420638 1245 SAKTLQSVVKTLESDKLK--------LEEKVKNLEQKLKAKSEQPLTVT 1285
Cdd:PLN03229 667 RSSDLKSKIELLKLEVAKasktpdvtEKEKIEALEQQIKQKIAEALNSS 715
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
872-1090 |
4.59e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.52 E-value: 4.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 872 ETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQK 951
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 952 AEQSQQ--------------ETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKhdadikgfKQNL 1017
Cdd:COG3883 95 LYRSGGsvsyldvllgsesfSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEAL--------KAEL 166
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 971420638 1018 LDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNE 1090
Cdd:COG3883 167 EAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 239
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
801-1130 |
5.84e-05 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 47.20 E-value: 5.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 801 LEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREE 880
Cdd:COG4372 29 LSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 881 REQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETL 960
Cdd:COG4372 109 EAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDEL 188
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 961 KTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEE 1040
Cdd:COG4372 189 LKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELELAIL 268
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1041 LKKQAEQAKADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLE 1120
Cdd:COG4372 269 VEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQLLLV 348
|
330
....*....|
gi 971420638 1121 NKKVEELKKE 1130
Cdd:COG4372 349 GLLDNDVLEL 358
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
738-1348 |
5.88e-05 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 47.64 E-value: 5.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 738 KLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLekNLSAVNQVKDSLEK 817
Cdd:COG5185 7 FLQVKNPLAKEGNANKELIEILLESSKSEGKTLVFITILFFPLGISRDSLRVTLRSVINVLDGL--NYQNDVKKSESSVK 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 818 ELQLLKEKftsavdGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIA 897
Cdd:COG5185 85 ARKFLKEK------KLDTKILQEYVNSLIKLPNYEWSADILISLLYLYKSEIVALKDELIKVEKLDEIADIEASYGEVET 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 898 EIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDM 977
Cdd:COG5185 159 GIIKDIFGKLTQELNQNLKKLEIFGLTLGLLKGISELKKAEPSGTVNSIKESETGNLGSESTLLEKAKEIINIEEALKGF 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 978 KKQmETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEV 1057
Cdd:COG5185 239 QDP-ESELEDLAQTSDKLEKLVEQNTDLRLEKLGENAESSKRLNENANNLIKQFENTKEKIAEYTKSIDIKKATESLEEQ 317
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1058 LQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQN--NLKNEEELTKSKELLNLENKKVEELKKEFEALK 1135
Cdd:COG5185 318 LAAAEAEQELEESKRETETGIQNLTAEIEQGQESLTENLEAIKEEieNIVGEVELSKSSEELDSFKDTIESTKESLDEIP 397
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1136 LAAAQKSQQLAALQEENVKLAEElgrsrdevtSHQKLEEERSVLNNQLLEMKKSLpsNTLRESTLKKEIDEERASLQKSI 1215
Cdd:COG5185 398 QNQRGYAQEILATLEDTLKAADR---------QIEELQRQIEQATSSNEEVSKLL--NELISELNKVMREADEESQSRLE 466
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1216 SDTSALITQKDEELEKLRNEITVLrgenasAKTLQSVVKTLESDKLKLEEKVKNLEQKLK--AKSEQPLTVTSPSGDIAA 1293
Cdd:COG5185 467 EAYDEINRSVRSKKEDLNEELTQI------ESRVSTLKATLEKLRAKLERQLEGVRSKLDqvAESLKDFMRARGYAHILA 540
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*.
gi 971420638 1294 NLLQDESAEDKQQEIDFLNS-VIVDLQRRNEELNLKiqrmCEAALNGNEEETINYD 1348
Cdd:COG5185 541 LENLIPASELIQASNAKTDGqAANLRTAVIDELTQY----LSTIESQQAREDPIPD 592
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1070-1280 |
6.47e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.07 E-value: 6.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1070 AIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQ 1149
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1150 EENVKLAEELGRSRDEVTSHQKLEEERSVLNNQllemkksLPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEEL 1229
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPPLALLLSPE-------DFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAEL 169
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 971420638 1230 EKLRNEITVLRGENASAKtlqsvvKTLESDKLKLEEKVKNLEQKLKAKSEQ 1280
Cdd:COG4942 170 EAERAELEALLAELEEER------AALEALKAERQKLLARLEKELAELAAE 214
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
802-1060 |
6.85e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 46.75 E-value: 6.85e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 802 EKNLSAVNQVKDSLEKELQLLKEKftsavdgAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREER 881
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAE-------LDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREE 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 882 -EQQLTEAKVK-LENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQlELTKANEKAVQLQKNVEQTAQKAEQSQQEt 959
Cdd:COG3883 88 lGERARALYRSgGSVSYLDVLLGSESFSDFLDRLSALSKIADADADLLE-ELKADKAELEAKKAELEAKLAELEALKAE- 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 960 LKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAE 1039
Cdd:COG3883 166 LEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAS 245
|
250 260
....*....|....*....|.
gi 971420638 1040 ELKKQAEQAKADKRAEEVLQT 1060
Cdd:COG3883 246 AAGAGAAGAAGAAAGSAGAAG 266
|
|
| Borrelia_P83 |
pfam05262 |
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins. |
876-1158 |
8.69e-05 |
|
Borrelia P83/100 protein; This family consists of several Borrelia P83/P100 antigen proteins.
Pssm-ID: 114011 [Multi-domain] Cd Length: 489 Bit Score: 46.92 E-value: 8.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 876 KEREEREQQLTEAKVKLenDIAEIMKSSGDSSAQLMKmndelrlkeRQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQS 955
Cdd:pfam05262 185 ALREDNEKGVNFRRDMT--DLKERESQEDAKRAQQLK---------EELDKKQIDADKAQQKADFAQDNADKQRDEVRQK 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 956 QqetlkthQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEmitkhdadikgfkqnllDAEEALKAAQKKNDELE 1035
Cdd:pfam05262 254 Q-------QEAKNLPKPADTSSPKEDKQVAENQKREIEKAQIEIKK-----------------NDEEALKAKDHKAFDLK 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1036 TQAEELKKQAEQAKADKR------AEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEklQNELDMLKQNNLKNEEE 1109
Cdd:pfam05262 310 QESKASEKEAEDKELEAQkkrepvAEDLQKTKPQVEAQPTSLNEDAIDSSNPVYGLKVVDP--ITNLSELVLIDLKTEVR 387
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 971420638 1110 LtKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEE 1158
Cdd:pfam05262 388 L-RESAQQTIRRRGLYEREKDLVAIAITSGNAKLQLVDIDLKNLEVIKE 435
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
673-1041 |
9.94e-05 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 46.97 E-value: 9.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 673 EQTLENLKA-----KLESVEdqhlvEMEDTLNKLQEAEIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQK 747
Cdd:PRK10929 29 TQELEQAKAaktpaQAEIVE-----ALQSALNWLEERKGSLERAKQYQQVIDNFPKLSAELRQQLNNERDEPRSVPPNMS 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 748 ANsEGKLEIQKLSEQLQAAEKQIQNlETEKVGGSSKVSNLTKELQGKEQKLL-DLEKNLSAVNQVKDSLEK-ELQLLKek 825
Cdd:PRK10929 104 TD-ALEQEILQVSSQLLEKSRQAQQ-EQDRAREISDSLSQLPQQQTEARRQLnEIERRLQTLGTPNTPLAQaQLTALQ-- 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 826 ftsavdgAENAQRAMQetINKLnqkeeqfalmssELEQLKSN----LTVMETKL--KEREEREQQLTEAKVKLENDIAEI 899
Cdd:PRK10929 180 -------AESAALKAL--VDEL------------ELAQLSANnrqeLARLRSELakKRSQQLDAYLQALRNQLNSQRQRE 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 900 MKSSGDSSAQLMKMNDElrLKERQLEQIQL--ELTKA-NEKAVQLQKNVEQTAQKAEQSQQ--ETLKTHQEE-------- 966
Cdd:PRK10929 239 AERALESTELLAEQSGD--LPKSIVAQFKInrELSQAlNQQAQRMDLIASQQRQAASQTLQvrQALNTLREQsqwlgvsn 316
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 967 -----LKKMQDQLTDMKK--QMETSQNQYKDLQAKYEketsEMITKHDADikgfKQNLLDAEEALKAAQKK--NDELETQ 1037
Cdd:PRK10929 317 algeaLRAQVARLPEMPKpqQLDTEMAQLRVQRLRYE----DLLNKQPQL----RQIRQADGQPLTAEQNRilDAQLRTQ 388
|
....
gi 971420638 1038 AEEL 1041
Cdd:PRK10929 389 RELL 392
|
|
| PRK11637 |
PRK11637 |
AmiB activator; Provisional |
923-1102 |
1.30e-04 |
|
AmiB activator; Provisional
Pssm-ID: 236942 [Multi-domain] Cd Length: 428 Bit Score: 46.22 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 923 QLEQIQLELTkANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEM 1002
Cdd:PRK11637 48 QLKSIQQDIA-AKEKSVRQQQQQRASLLAQLKKQEEAISQASRKLRETQNTLNQLNKQIDELNASIAKLEQQQAAQERLL 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1003 ITKHDAdikGFKQN-------LLDAEEAL-------------KAAQKKNDELETQAEEL---KKQAEQAKADKRaeEVLQ 1059
Cdd:PRK11637 127 AAQLDA---AFRQGehtglqlILSGEESQrgerilayfgylnQARQETIAELKQTREELaaqKAELEEKQSQQK--TLLY 201
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 971420638 1060 TMEKVTKEKDAIHQEKIETLASLENSRQtneKLQNELDMLKQN 1102
Cdd:PRK11637 202 EQQAQQQKLEQARNERKKTLTGLESSLQ---KDQQQLSELRAN 241
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1072-1345 |
1.37e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.59 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1072 HQEKIETLASLENSRQTNEKLQN-------ELDMLKQNNLKNEEELTKSKELLNLE----NKKVEELKKEFEALKLAAAQ 1140
Cdd:TIGR02168 171 KERRKETERKLERTRENLDRLEDilnelerQLKSLERQAEKAERYKELKAELRELElallVLRLEELREELEELQEELKE 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1141 KSQQLAALQEENVKLAEELGRSRDEVTS-HQKLEEERSVLNNQL-----LEMKKSLPSNTLRES-TLKKEIDEERASLQK 1213
Cdd:TIGR02168 251 AEEELEELTAELQELEEKLEELRLEVSElEEEIEELQKELYALAneisrLEQQKQILRERLANLeRQLEELEAQLEELES 330
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1214 SISDTSALITQKDEELEKLRNEITvlrGENASAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQpltVTSPSGDIAA 1293
Cdd:TIGR02168 331 KLDELAEELAELEEKLEELKEELE---SLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQ---IASLNNEIER 404
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|..
gi 971420638 1294 NLLQDESAEDKQQEidfLNSVIVDLQRRNEELNLKIQRMCEAALNGNEEETI 1345
Cdd:TIGR02168 405 LEARLERLEDRRER---LQQEIEELLKKLEEAELKELQAELEELEEELEELQ 453
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
761-1086 |
1.60e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.45 E-value: 1.60e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 761 EQLQAAEKQIQNLETEkvggsskVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLlkekftsavdgaenaqRAM 840
Cdd:COG4913 610 AKLAALEAELAELEEE-------LAEAEERLEALEAELDALQERREALQRLAEYSWDEIDV----------------ASA 666
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 841 QETINKLNQKEEQFALMSSELEQLKSnltvmetKLKEREEREQQLTEAKVKLENDIAEImkssgdssaqlmkmndelrlk 920
Cdd:COG4913 667 EREIAELEAELERLDASSDDLAALEE-------QLEELEAELEELEEELDELKGEIGRL--------------------- 718
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 921 ERQLEQIQLELTkanekavQLQKNVEQTAQKAEQSQQETLKTHQEELKKmQDQLTDMKKQMETSQNQYKDLQAKYEKETS 1000
Cdd:COG4913 719 EKELEQAEEELD-------ELQDRLEAAEDLARLELRALLEERFAAALG-DAVERELRENLEERIDALRARLNRAEEELE 790
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1001 EMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQA-EELKKQAEQAKADKRAEEVLQTMEKVTKEKDAIhQEKIETL 1079
Cdd:COG4913 791 RAMRAFNREWPAETADLDADLESLPEYLALLDRLEEDGlPEYEERFKELLNENSIEFVADLLSKLRRAIREI-KERIDPL 869
|
....*...
gi 971420638 1080 -ASLENSR 1086
Cdd:COG4913 870 nDSLKRIP 877
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
882-1166 |
1.63e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 46.16 E-value: 1.63e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 882 EQQLTEAKVKLEND-IAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELtkaNEKAVQLQKNVEQTAqkaeqsqqetl 960
Cdd:PHA02562 189 KIDHIQQQIKTYNKnIEEQRKKNGENIARKQNKYDELVEEAKTIKAEIEEL---TDELLNLVMDIEDPS----------- 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 961 kthqEELKKMQDQLTDMKKQMETSQNQYKdlqakyeketseMITKHDAdIKGFKQNLLDAEEALKAAQKKNDELETQAEE 1040
Cdd:PHA02562 255 ----AALNKLNTAAAKIKSKIEQFQKVIK------------MYEKGGV-CPTCTQQISEGPDRITKIKDKLKELQHSLEK 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1041 LKkqaeqakadkraeevlqtmekvtkekdaihqEKIETLASLENSRQTNEKLQNELdmlkQNNLKNEeeltksKELLNLE 1120
Cdd:PHA02562 318 LD-------------------------------TAIDELEEIMDEFNEQSKKLLEL----KNKISTN------KQSLITL 356
|
250 260 270 280
....*....|....*....|....*....|....*....|....*.
gi 971420638 1121 NKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEV 1166
Cdd:PHA02562 357 VDKAKKVKAAIEELQAEFVDNAEELAKLQDELDKIVKTKSELVKEK 402
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1098-1330 |
1.73e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.16 E-value: 1.73e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1098 MLKQNNLKNEEELTKSKELLNlenKKVEELKKEFEAL--KLAAAQKSQQLAALQEENVKLAEELGRSRDEVTshqKLEEE 1175
Cdd:COG3206 161 YLEQNLELRREEARKALEFLE---EQLPELRKELEEAeaALEEFRQKNGLVDLSEEAKLLLQQLSELESQLA---EARAE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1176 RSVLNNQLLEMKKSLPSN-----TLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGEnaSAKTLQ 1250
Cdd:COG3206 235 LAEAEARLAALRAQLGSGpdalpELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQ--LQQEAQ 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1251 SVVKTLESDKLKLEEKVKNLEQKLKAKSEQpltvtspsgdiAANLLQDES-AEDKQQEIDFLNSVIVDLQRRNEELNLKI 1329
Cdd:COG3206 313 RILASLEAELEALQAREASLQAQLAQLEAR-----------LAELPELEAeLRRLEREVEVARELYESLLQRLEEARLAE 381
|
.
gi 971420638 1330 Q 1330
Cdd:COG3206 382 A 382
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
548-869 |
1.88e-04 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 45.72 E-value: 1.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 548 EALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAE----FA 623
Cdd:COG5185 242 ESELEDLAQTSDKLEKLVEQNTDLRLEKLGENAESSKRLNENANNLIKQFENTKEKIAEYTKSIDIKKATESLEeqlaAA 321
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 624 ELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEqtLENLKAKLESVEDQHLVEMEDTLNKLQE 703
Cdd:COG5185 322 EAEQELEESKRETETGIQNLTAEIEQGQESLTENLEAIKEEIENIVGEVE--LSKSSEELDSFKDTIESTKESLDEIPQN 399
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 704 AEIKVKELDVLQAKcneqtkligSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSK 783
Cdd:COG5185 400 QRGYAQEILATLED---------TLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREADEESQSRLEEAYD 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 784 VSNltkelQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQ 863
Cdd:COG5185 471 EIN-----RSVRSKKEDLNEELTQIESRVSTLKATLEKLRAKLERQLEGVRSKLDQVAESLKDFMRARGYAHILALENLI 545
|
....*.
gi 971420638 864 LKSNLT 869
Cdd:COG5185 546 PASELI 551
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
430-818 |
2.02e-04 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 46.00 E-value: 2.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 430 NQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEDPENVATvsekSRIMELERDLALRVKEVAElrgrlesskhiddvd 509
Cdd:PLN03229 420 NMKKREAVKTPVRELEGEVEKLKEQILKAKESSSKPSELALN----EMIEKLKKEIDLEYTEAVI--------------- 480
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 510 tSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASnermgkenESLKTKLDHANkensdviELW 589
Cdd:PLN03229 481 -AMGLQERLENLREEFSKANSQDQLMHPVLMEKIEKLKDEFNKRLSRAPNY--------LSLKYKLDMLN-------EFS 544
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 590 KSKlesAIASHQQAMEELKVSFNKGVgAQTAEFAELKTQMEKVKLDYENEmsnlKLKQENEKSQHLKEiEALKAKLlEVT 669
Cdd:PLN03229 545 RAK---ALSEKKSKAEKLKAEINKKF-KEVMDRPEIKEKMEALKAEVASS----GASSGDELDDDLKE-KVEKMKK-EIE 614
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 670 EEKEQTLENLKAKLESVEDQHLVEMEDTLNklqeaeikvkelDVLQAKcneqtklIGSLTQQIRASEEKLLDLAALQKAN 749
Cdd:PLN03229 615 LELAGVLKSMGLEVIGVTKKNKDTAEQTPP------------PNLQEK-------IESLNEEINKKIERVIRSSDLKSKI 675
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 750 SEGKLEIQKLSEQLQAAEKQ-IQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKE 818
Cdd:PLN03229 676 ELLKLEVAKASKTPDVTEKEkIEALEQQIKQKIAEALNSSELKEKFEELEAELAAARETAAESNGSLKND 745
|
|
| PTZ00440 |
PTZ00440 |
reticulocyte binding protein 2-like protein; Provisional |
550-1280 |
2.10e-04 |
|
reticulocyte binding protein 2-like protein; Provisional
Pssm-ID: 240419 [Multi-domain] Cd Length: 2722 Bit Score: 45.98 E-value: 2.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 550 LRKEIKTLSASNERMGKENESLKTKLDHankENSDVIELWKSKLESAiasHQQAMEELKVSFNKGVGAQTAEFAELKTQM 629
Cdd:PTZ00440 589 LNDEIDNIIQQIEELINEALFNKEKFIN---EKNDLQEKVKYILNKF---YKGDLQELLDELSHFLDDHKYLYHEAKSKE 662
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 630 EKVKL--DYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEE-KEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEI 706
Cdd:PTZ00440 663 DLQTLlnTSKNEYEKLEFMKSDNIDNIIKNLKKELQNLLSLKENiIKKQLNNIEQDISNSLNQYTIKYNDLKSSIEEYKE 742
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 707 KVKELDVLQAKCNE-QTKLIGSLTQQirasEEKLLDLAALQKANSEGKLEI----QKLSEQLQAAEKQIQNLETEKVGGS 781
Cdd:PTZ00440 743 EEEKLEVYKHQIINrKNEFILHLYEN----DKDLPDGKNTYEEFLQYKDTIlnkeNKISNDINILKENKKNNQDLLNSYN 818
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 782 SKVSNLTKELQGKEQKLLDLEKNLSA--VNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMqETINKLNQKEEQFALMSS 859
Cdd:PTZ00440 819 ILIQKLEAHTEKNDEELKQLLQKFPTedENLNLKELEKEFNENNQIVDNIIKDIENMNKNI-NIIKTLNIAINRSNSNKQ 897
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 860 ELEQLKSNltvmETKLKEREEREQQLTEAKVKLENDIAEIMKSsgdssaqlmKMNDELRLKERQLEQiqlelTKANEKAV 939
Cdd:PTZ00440 898 LVEHLLNN----KIDLKNKLEQHMKIINTDNIIQKNEKLNLLN---------NLNKEKEKIEKQLSD-----TKINNLKM 959
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 940 QLQKNVEQTaQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYE----KETSEMITKHDADIKGFKQ 1015
Cdd:PTZ00440 960 QIEKTLEYY-DKSKENINGNDGTHLEKLDKEKDEWEHFKSEIDKLNVNYNILNKKIDdlikKQHDDIIELIDKLIKEKGK 1038
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1016 NLLDA---------------------------------------EEALKAAQKKNDELETQAEELKKQAEQAKADKRAEE 1056
Cdd:PTZ00440 1039 EIEEKvdqyisllekmktklssfhfnidikkyknpkikeeikllEEKVEALLKKIDENKNKLIEIKNKSHEHVVNADKEK 1118
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1057 VLQTMEKVTKEKD--AIHQEKIETLASLENSRQTNEKLQNeldmlkQNNLKNEEELTKSKELLNLENKKVEELKKEFEAL 1134
Cdd:PTZ00440 1119 NKQTEHYNKKKKSleKIYKQMEKTLKELENMNLEDITLNE------VNEIEIEYERILIDHIVEQINNEAKKSKTIMEEI 1192
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1135 KLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLREStlkKEIDEERASLQKS 1214
Cdd:PTZ00440 1193 ESYKKDIDQVKKNMSKERNDHLTTFEYNAYYDKATASYENIEELTTEAKGLKGEANRSTNVDEL---KEIKLQVFSYLQQ 1269
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 971420638 1215 ISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLE-SDKLKLE-EKVKNLEQKLKAKSEQ 1280
Cdd:PTZ00440 1270 VIKENNKMENALHEIKNMYEFLISIDSEKILKEILNSTKKAEEfSNDAKKElEKTDNLIKQVEAKIEQ 1337
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
658-931 |
2.15e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.06 E-value: 2.15e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 658 IEALKAKLLEVTEEkeqtLENLKAKLESVEDQHlvemeDTLNKLQEAEIKVK-----ELDVLQAKcneqtKLIGSLTQQI 732
Cdd:COG4913 612 LAALEAELAELEEE----LAEAEERLEALEAEL-----DALQERREALQRLAeyswdEIDVASAE-----REIAELEAEL 677
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 733 RASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEkvggsskVSNLTKELQGKEQKLLDLEKnlSAVNQVK 812
Cdd:COG4913 678 ERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKE-------LEQAEEELDELQDRLEAAED--LARLELR 748
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 813 DSLEKEL-QLLKEKFTSAVdgAENAQRAMQETINKLNQKEEQFA-LMSSELEQLKSNLTVMETKLKEREEREQQLTEAK- 889
Cdd:COG4913 749 ALLEERFaAALGDAVEREL--RENLEERIDALRARLNRAEEELErAMRAFNREWPAETADLDADLESLPEYLALLDRLEe 826
|
250 260 270 280
....*....|....*....|....*....|....*....|....*..
gi 971420638 890 ---VKLENDIAE-IMKSSGDSSAQL-MKMNDELRLKERQLEQIQLEL 931
Cdd:COG4913 827 dglPEYEERFKElLNENSIEFVADLlSKLRRAIREIKERIDPLNDSL 873
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
337-560 |
2.48e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.68 E-value: 2.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 337 LTETSSRYARKISGTTALQEALKEKQQHIEQLlAERDLERAEVAKATSHVGEIEQELALVRDGHDRhVLEMEAKMDQLRA 416
Cdd:COG4913 622 LEEELAEAEERLEALEAELDALQERREALQRL-AEYSWDEIDVASAEREIAELEAELERLDASSDD-LAALEEQLEELEA 699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 417 MVEAADREKVELLNQLEEEKRKVEDLQFRVEE------------ESITKGDLERKRQISEDPENVATVSEksrimELERD 484
Cdd:COG4913 700 ELEELEEELDELKGEIGRLEKELEQAEEELDElqdrleaaedlaRLELRALLEERFAAALGDAVERELRE-----NLEER 774
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 485 LALRVKEVAELRGRLESSKH---------IDDVDTSLS-------LLQEISS-----LQEKMAAAGKEH-QREMSSLKEK 542
Cdd:COG4913 775 IDALRARLNRAEEELERAMRafnrewpaeTADLDADLEslpeylaLLDRLEEdglpeYEERFKELLNENsIEFVADLLSK 854
|
250
....*....|....*...
gi 971420638 543 FESSEEALRKEIKTLSAS 560
Cdd:COG4913 855 LRRAIREIKERIDPLNDS 872
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
952-1159 |
2.65e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.39 E-value: 2.65e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 952 AEQSQQETLKTHQEELKK----MQDQLTDMKKQMETSQNQYKDLQAKYE-KETSEMITKHDADIKGFKQNLLDAEEALKA 1026
Cdd:COG3206 158 AEAYLEQNLELRREEARKalefLEEQLPELRKELEEAEAALEEFRQKNGlVDLSEEAKLLLQQLSELESQLAEARAELAE 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1027 AQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVTKEKDAI-------HQEKIETLASLENSRQtneKLQNELDML 1099
Cdd:COG3206 238 AEARLAALRAQLGSGPDALPELLQSPVIQQLRAQLAELEAELAELsarytpnHPDVIALRAQIAALRA---QLQQEAQRI 314
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1100 KQNNLKNEEELTKSKELLNlenKKVEELKKEFEALklaaAQKSQQLAALQEEnVKLAEEL 1159
Cdd:COG3206 315 LASLEAELEALQAREASLQ---AQLAQLEARLAEL----PELEAELRRLERE-VEVAREL 366
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
538-832 |
2.72e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 45.30 E-value: 2.72e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 538 SLKEKFESSEEALRK----EIktlsasnermgkenESLKTKLdhANKENSDVIELwKSKLESAIASHQQAMEELKVSFNK 613
Cdd:PRK05771 13 TLKSYKDEVLEALHElgvvHI--------------EDLKEEL--SNERLRKLRSL-LTKLSEALDKLRSYLPKLNPLREE 75
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 614 GVGAQTAEFAELKTQMEKVKLDYENEMSNL--KLKQ-ENEKSQHLKEIEALKA-KLLEVTEEKEQTLENLKAKLESVEDQ 689
Cdd:PRK05771 76 KKKVSVKSLEELIKDVEEELEKIEKEIKELeeEISElENEIKELEQEIERLEPwGNFDLDLSLLLGFKYVSVFVGTVPED 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 690 HLVEMEDTLNKLQEAEIKVKELD----VLQAKcnEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQA 765
Cdd:PRK05771 156 KLEELKLESDVENVEYISTDKGYvyvvVVVLK--ELSDEVEEELKKLGFERLELEEEGTPSELIREIKEELEEIEKERES 233
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 971420638 766 AEKQIQNLETEkvggsskvsnltkelqgKEQKLLDLEKNLSavnQVKDSLEKELQLLKEKFTSAVDG 832
Cdd:PRK05771 234 LLEELKELAKK-----------------YLEELLALYEYLE---IELERAEALSKFLKTDKTFAIEG 280
|
|
| ClyA_NheA-like |
cd22654 |
Bacillus cereus non-hemolytic enterotoxin (Nhe) component A (NheA), and similar proteins; This ... |
693-1006 |
2.75e-04 |
|
Bacillus cereus non-hemolytic enterotoxin (Nhe) component A (NheA), and similar proteins; This model contains Bacillus cereus tripartite non-hemolytic enterotoxin (Nhe) component A (NheA), a member of the cytolysin A (ClyA) family of alpha pore-forming toxins (alpha-PFTs). Non-hemolytic enterotoxin (Nhe), despite its name, is hemolytic and able to lyse erythrocytes from various mammalian organisms. It consists of three proteins, NheA, NheB and NheC, encoded by one operon containing three genes nheA, nheB and nheC, respectively. Separately, these three proteins show no toxicity; maximal activity is seen only when all three components are presented. The NheB and NheC components are able to bind to cell membranes while NheA is not; NheC primes the host cell for the formation of ion permeable NheB/C pores. Binding of NheA to NheB/NheC is thought to be the final stage of pore formation. Structure of NheA shows an elongated, almost entirely alpha-helical protein with an enlarged "head" domain compared with other cytolysins, displaying on its surface an enlarged beta-tongue which is of amphipathic rather than hydrophobic nature. It has been proposed that NheA could even form beta-barrel pores.
Pssm-ID: 439152 [Multi-domain] Cd Length: 333 Bit Score: 44.95 E-value: 2.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 693 EMEDTLNKLQEAEIKVKE-LDVLQAK---CNEQtklIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEK 768
Cdd:cd22654 31 AMPSLTNHQQTAKENVREwLDEYNPKlidLNQD---MINFSQRFNNYYDKLYDLAGKINEDEQAKEDFLNGINKLQSQLQ 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 769 QIQNletekvggsskvsnltkelqgkeqkllDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVD--GAENAQRA-MQETIN 845
Cdd:cd22654 108 TIQN---------------------------SMEQTSSNLNRFKTLLDADSKNFSTDAKKAIDslSGSNGEIAqLRTQIK 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 846 KLNQ--KEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDssaQLMKMNDELRLKERQ 923
Cdd:cd22654 161 TINDeiQEELTKILNRPIEVGDGSINIGKQVFTITITTATTKTVDVTSIGGLINGIGNASDD---EVKEAANKIQQKQKE 237
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 924 LEQIQLELTKANEKAVQLQKNVEQTAQKAE--QSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYE--KET 999
Cdd:cd22654 238 LVDLIKKLSDAEIQATQLTLVEDQVNGFTEliKRQIATLENLVEDWEMLNQNMNQLQTNVNSGKIDSKLLQKQLKqiKKI 317
|
....*..
gi 971420638 1000 SEMITKH 1006
Cdd:cd22654 318 SDELNKQ 324
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
767-1127 |
2.86e-04 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 44.89 E-value: 2.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 767 EKQIQNLETEKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINK 846
Cdd:COG4372 9 GKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQ 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 847 LNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQ 926
Cdd:COG4372 89 LQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAA 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 927 IQLELTKANEKAVQLQ-KNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITK 1005
Cdd:COG4372 169 LEQELQALSEAEAEQAlDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDK 248
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1006 HDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENS 1085
Cdd:COG4372 249 EELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKL 328
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 971420638 1086 RQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEEL 1127
Cdd:COG4372 329 ELALAILLAELADLLQLLLVGLLDNDVLELLSKGAEAGVADG 370
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
966-1168 |
2.97e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 44.82 E-value: 2.97e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 966 ELKKMQDQLTDMKKQMETSQNQYKDLQAKYEkETSEMITKHDADIKGFKQNLLDAEEALKAAQKkndELETQAEELKKQA 1045
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELE-ELNEEYNELQAELEALQAEIDKLQAEIAEAEA---EIEERREELGERA 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1046 EQAKADKRA-------------EEVLQTMEKVTKekdaIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTK 1112
Cdd:COG3883 93 RALYRSGGSvsyldvllgsesfSDFLDRLSALSK----IADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEA 168
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 971420638 1113 SKELLnleNKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTS 1168
Cdd:COG3883 169 AKAEL---EAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAA 221
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
623-759 |
3.23e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 45.15 E-value: 3.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 623 AELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEvteeKEQTLENLKAKLESVEDQHLVEMEDTLNKLQ 702
Cdd:PRK12704 49 KEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQ----KEENLDRKLELLEKREEELEKKEKELEQKQQ 124
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*....
gi 971420638 703 EAEIKVKELDVLQAKCNEQTKLIGSLTQqirasEE--KLLdlaaLQKANSEGKLEIQKL 759
Cdd:PRK12704 125 ELEKKEEELEELIEEQLQELERISGLTA-----EEakEIL----LEKVEEEARHEAAVL 174
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
1360-1377 |
3.70e-04 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 38.99 E-value: 3.70e-04
|
| Mitofilin |
pfam09731 |
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. ... |
746-1157 |
3.75e-04 |
|
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. Mitofilin is enriched in the narrow space between the inner boundary and the outer membranes, where it forms a homotypic interaction and assembles into a large multimeric protein complex. The first 78 amino acids contain a typical amino-terminal-cleavable mitochondrial presequence rich in positive-charged and hydroxylated residues and a membrane anchor domain. In addition, it has three centrally located coiled coil domains.
Pssm-ID: 430783 [Multi-domain] Cd Length: 618 Bit Score: 45.13 E-value: 3.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 746 QKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNlTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEK 825
Cdd:pfam09731 102 AEEEKEATKDAAEAKAQLPKSEQEKEKALEEVLKEAISKAE-SATAVAKEAKDDAIQAVKAHTDSLKEASDTAEISREKA 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 826 FTSAVDGAENAQRAMQETINKLNQKEEQFAL-MSSELEQLKSNLTVMETKLKEREEREQ-------QLTEAKVKLENDIA 897
Cdd:pfam09731 181 TDSALQKAEALAEKLKEVINLAKQSEEEAAPpLLDAAPETPPKLPEHLDNVEEKVEKAQslaklvdQYKELVASERIVFQ 260
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 898 EIMKS-----SGDSSAQLMKMNDELrlkERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELkkmqd 972
Cdd:pfam09731 261 QELVSifpdiIPVLKEDNLLSNDDL---NSLIAHAHREIDQLSKKLAELKKREEKHIERALEKQKEELDKLAEEL----- 332
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 973 qltdMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKG-FKQNLLDAEEALKaaqkknDELETQAEELKKQAEQakad 1051
Cdd:pfam09731 333 ----SARLEEVRAADEAQLRLEFEREREEIRESYEEKLRTeLERQAEAHEEHLK------DVLVEQEIELQREFLQ---- 398
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1052 kraeevlQTMEKVTKEKDAiHQEKIETLASlensrqtneklqneldmlkqnNLKNEEELTKSKELLNLENKKVEELKKEF 1131
Cdd:pfam09731 399 -------DIKEKVEEERAG-RLLKLNELLA---------------------NLKGLEKATSSHSEVEDENRKAQQLWLAV 449
|
410 420
....*....|....*....|....*...
gi 971420638 1132 EALK--LAAAQKSQQLAALQEENVKLAE 1157
Cdd:pfam09731 450 EALRstLEDGSADSRPRPLVRELKALKE 477
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
931-1090 |
4.04e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 44.77 E-value: 4.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 931 LTKANEKAVQLqknVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETS-QNQYKDLQAKYE--KETSEMITKHD 1007
Cdd:PRK12704 33 IKEAEEEAKRI---LEEAKKEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNElQKLEKRLLQKEEnlDRKLELLEKRE 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1008 ADIKGFKQNLLDAEEALKAAQKKNDELETQA-EELKK----QAEQAKadkraEEVLQTMEKVTKEKDAIHQEKIETLASL 1082
Cdd:PRK12704 110 EELEKKEKELEQKQQELEKKEEELEELIEEQlQELERisglTAEEAK-----EILLEKVEEEARHEAAVLIKEIEEEAKE 184
|
....*...
gi 971420638 1083 ENSRQTNE 1090
Cdd:PRK12704 185 EADKKAKE 192
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
353-581 |
4.29e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.37 E-value: 4.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 353 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRdghdRHVLEMEAKMDQLRAMVEAADREKVELLNQL 432
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALA----RRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 433 EEEKRKVEDL---QFRVEEESITKGDLErkrqiSEDPENVAtvsekSRIMELERDLALRVKEVAELRGRLEsskhidDVD 509
Cdd:COG4942 100 EAQKEELAELlraLYRLGRQPPLALLLS-----PEDFLDAV-----RRLQYLKYLAPARREQAEELRADLA------ELA 163
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 971420638 510 TSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKE 581
Cdd:COG4942 164 ALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
657-805 |
4.36e-04 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 44.69 E-value: 4.36e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 657 EIEALKAKLLEVTEEKEQtlenLKAKLESVEDQHLVEMEDTLNKLQEaeikvkELDVLQAKCNEQTKLIGSLTQQIRASE 736
Cdd:COG0542 412 ELDELERRLEQLEIEKEA----LKKEQDEASFERLAELRDELAELEE------ELEALKARWEAEKELIEEIQELKEELE 481
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 971420638 737 EKLLDLAALQKAnsegkleiqklSEQLQAAEKQIQNLETEKVGGS---SKVSNLT-----KELQGKEQKLLDLEKNL 805
Cdd:COG0542 482 QRYGKIPELEKE-----------LAELEEELAELAPLLREEVTEEdiaEVVSRWTgipvgKLLEGEREKLLNLEEEL 547
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
841-1027 |
4.39e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 43.37 E-value: 4.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 841 QETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLM--KMNDELR 918
Cdd:COG1579 13 QELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGnvRNNKEYE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 919 LKERQLEQIQLELTKANEKAVQLQKNVEQtaqkaeqsqqetlktHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKE 998
Cdd:COG1579 93 ALQKEIESLKRRISDLEDEILELMERIEE---------------LEEELAELEAELAELEAELEEKKAELDEELAELEAE 157
|
170 180
....*....|....*....|....*....
gi 971420638 999 TSEMITKHDADIKGFKQNLLDAEEALKAA 1027
Cdd:COG1579 158 LEELEAEREELAAKIPPELLALYERIRKR 186
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
916-1230 |
4.70e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 44.94 E-value: 4.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 916 ELRLKERQLEQIQLELTKANEKAVQLQKNVEQtaqkaeqsqqetLKTHQEELKKMQDQLTDMKKqmETSQNQYKDLQAKY 995
Cdd:COG3096 837 ELAALRQRRSELERELAQHRAQEQQLRQQLDQ------------LKEQLQLLNKLLPQANLLAD--ETLADRLEELREEL 902
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 996 EK--ETSEMITKHDADIkgfkQNLLDAEEALKAAQKKNDELETQAEELKkqAEQAKADKRAEEVLQTMEKVTkekdaiHQ 1073
Cdd:COG3096 903 DAaqEAQAFIQQHGKAL----AQLEPLVAVLQSDPEQFEQLQADYLQAK--EQQRRLKQQIFALSEVVQRRP------HF 970
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1074 EKIETLASLENSRQTNEKLQNELDMLkqnnlknEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEEnv 1153
Cdd:COG3096 971 SYEDAVGLLGENSDLNEKLRARLEQA-------EEARREAREQLRQAQAQYSQYNQVLASLKSSRDAKQQTLQELEQE-- 1041
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1154 klAEELGrSRDEVTSHQKLEEERSVLNNQllemkksLPSNTLRESTLKKEI---DEERASLQKSISDTSALITQKDEELE 1230
Cdd:COG3096 1042 --LEELG-VQADAEAEERARIRRDELHEE-------LSQNRSRRSQLEKQLtrcEAEMDSLQKRLRKAERDYKQEREQVV 1111
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
355-713 |
4.70e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 44.73 E-value: 4.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 355 QEALK-EKQQHIEQLLAERDLERAEVAKAtshvGEIEQELALVRDgHDRHVLEMEAKMDQLRamveaadrekvellnqLE 433
Cdd:pfam17380 298 QERLRqEKEEKAREVERRRKLEEAEKARQ----AEMDRQAAIYAE-QERMAMERERELERIR----------------QE 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 434 EEKRKVEdlqfRVEEESITkgdlerkrqisedpenvatvSEKSRIMELERDLALRVKEVAELRGRLESSKH--IDDVDTS 511
Cdd:pfam17380 357 ERKRELE----RIRQEEIA--------------------MEISRMRELERLQMERQQKNERVRQELEAARKvkILEEERQ 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 512 LSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTK---LDHANKENSDVIEL 588
Cdd:pfam17380 413 RKIQQQKVEMEQIRAEQEEARQREVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKkleLEKEKRDRKRAEEQ 492
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 589 WKSKLESAIASHQQAMEElkvsfnkgvgaQTAEFAELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEV 668
Cdd:pfam17380 493 RRKILEKELEERKQAMIE-----------EERKRKLLEKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKA 561
|
330 340 350 360
....*....|....*....|....*....|....*....|....*
gi 971420638 669 TEEkeqtlenlKAKLESVEDQhlvemEDTLNKLQEAEIKVKELDV 713
Cdd:pfam17380 562 TEE--------RSRLEAMERE-----REMMRQIVESEKARAEYEA 593
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
541-856 |
5.17e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 44.51 E-value: 5.17e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 541 EKFESSEEALRKEIKTLSAsneRMGKENESLKTkldhANKENSDViELWKSKLESAiashQQAMEELKVSFNKGVGAQTA 620
Cdd:PLN02939 159 EKILTEKEALQGKINILEM---RLSETDARIKL----AAQEKIHV-EILEEQLEKL----RNELLIRGATEGLCVHSLSK 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 621 EFAELKTQmekvkldyenemsNLKLKQEneksqhlkeIEALKAKLLEV--TEEKEQTLENLKAKLESVedqhLVEMEDTL 698
Cdd:PLN02939 227 ELDVLKEE-------------NMLLKDD---------IQFLKAELIEVaeTEERVFKLEKERSLLDAS----LRELESKF 280
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 699 NKLQEAEIKVKEL--DVLQAKCNEQTKLIGSLTQQIRASeeklldlAALQKANSEGKLEIQKLSEQLQAAekqiqnlete 776
Cdd:PLN02939 281 IVAQEDVSKLSPLqyDCWWEKVENLQDLLDRATNQVEKA-------ALVLDQNQDLRDKVDKLEASLKEA---------- 343
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 777 kvggssKVSNLTKELqgkeqklLDLeknlsaVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFAL 856
Cdd:PLN02939 344 ------NVSKFSSYK-------VEL------LQQKLKLLEERLQASDHEIHSYIQLYQESIKEFQDTLSKLKEESKKRSL 404
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
828-1056 |
5.30e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 44.05 E-value: 5.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 828 SAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDsS 907
Cdd:COG3883 13 FADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGE-R 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 908 AQLMKMNDELRLKERQLEQIQlELTKANEKAVQLQKNVEQTAQKAEQ--SQQETLKTHQEELKKMQDQLTDMKKQMETSQ 985
Cdd:COG3883 92 ARALYRSGGSVSYLDVLLGSE-SFSDFLDRLSALSKIADADADLLEElkADKAELEAKKAELEAKLAELEALKAELEAAK 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 971420638 986 NQYKDLQAKYEKETsemitkhdADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEE 1056
Cdd:COG3883 171 AELEAQQAEQEALL--------AQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAA 233
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
747-1108 |
6.88e-04 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 44.07 E-value: 6.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 747 KANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKVSNLTKElqgKEQKLLDLEKNLSAVNQvkdSLEKELQLLKEKF 826
Cdd:PLN03229 422 KKREAVKTPVRELEGEVEKLKEQILKAKESSSKPSELALNEMIE---KLKKEIDLEYTEAVIAM---GLQERLENLREEF 495
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 827 TSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLtvmeTKLKEReEREQQLTEAKVKLENDIAEIMKssgds 906
Cdd:PLN03229 496 SKANSQDQLMHPVLMEKIEKLKDEFNKRLSRAPNYLSLKYKL----DMLNEF-SRAKALSEKKSKAEKLKAEINK----- 565
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 907 saQLMKMNDELRLKERqLEQIQLELTKAN-EKAVQLQKNVEQTAQKAEQSQQETLKthqEELKKMQDQLTDM-KKQMETS 984
Cdd:PLN03229 566 --KFKEVMDRPEIKEK-MEALKAEVASSGaSSGDELDDDLKEKVEKMKKEIELELA---GVLKSMGLEVIGVtKKNKDTA 639
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 985 QNQ-YKDLQAKYEK---ETSEMITK--HDADIKGfKQNLLDAEEAlKAAQKKNDELETQAEELKKQAEQAKAdkraeEVL 1058
Cdd:PLN03229 640 EQTpPPNLQEKIESlneEINKKIERviRSSDLKS-KIELLKLEVA-KASKTPDVTEKEKIEALEQQIKQKIA-----EAL 712
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 971420638 1059 QTMEkvTKEKdaihQEKI--ETLASLENSRQTNEKLQNelDMLKQNNLKNEE 1108
Cdd:PLN03229 713 NSSE--LKEK----FEELeaELAAARETAAESNGSLKN--DDDKEEDSKEDG 756
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
915-1090 |
7.47e-04 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 43.64 E-value: 7.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 915 DELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETlkthQEELKKmqdQLTDMKKQMETSQNQYKDLQAK 994
Cdd:PRK09510 90 EELQQKQAAEQERLKQLEKERLAAQEQKKQAEEAAKQAALKQKQA----EEAAAK---AAAAAKAKAEAEAKRAAAAAKK 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 995 YEKETSEmitKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAE-EVLQTMEKVTKEKDAIHQ 1073
Cdd:PRK09510 163 AAAEAKK---KAEAEAAKKAAAEAKKKAEAEAAAKAAAEAKKKAEAEAKKKAAAEAKKKAAaEAKAAAAKAAAEAKAAAE 239
|
170
....*....|....*..
gi 971420638 1074 EKIETLASLENSRQTNE 1090
Cdd:PRK09510 240 KAAAAKAAEKAAAAKAA 256
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
407-711 |
7.57e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 44.15 E-value: 7.57e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 407 MEAKMDQLRAMveAADREKVELLNQL-EEEKRKVEDLQFRVEEESITKgDLERKRQISEDPENVATVSEKSRImELERDL 485
Cdd:PRK05771 2 APVRMKKVLIV--TLKSYKDEVLEALhELGVVHIEDLKEELSNERLRK-LRSLLTKLSEALDKLRSYLPKLNP-LREEKK 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 486 ALRVKEVAELRGRLES--SKHIDDVDtslSLLQEISSLQEKMaaagKEHQREMSSLK--EKFESSEEALRKEiKTLSASN 561
Cdd:PRK05771 78 KVSVKSLEELIKDVEEelEKIEKEIK---ELEEEISELENEI----KELEQEIERLEpwGNFDLDLSLLLGF-KYVSVFV 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 562 ERMGKENESLktklDHANKENSDVIELWKSKLES--AIASHQQAMEELkvsfnkgvgaqtaeFAELKtqmekvkldyENE 639
Cdd:PRK05771 150 GTVPEDKLEE----LKLESDVENVEYISTDKGYVyvVVVVLKELSDEV--------------EEELK----------KLG 201
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 971420638 640 MSNLKLKQENEKSQhlkEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKVKEL 711
Cdd:PRK05771 202 FERLELEEEGTPSE---LIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEYLEIELERAEALSKFL 270
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
333-687 |
9.25e-04 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.90 E-value: 9.25e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 333 RTGLLTETSSRYARKISGTTALQEA---LKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlvrdghdrhvlEMEA 409
Cdd:TIGR02169 690 LSSLQSELRRIENRLDELSQELSDAsrkIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIE-----------NVKS 758
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 410 KMDQLRAMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLERKRQisedpenvatvseKSRIMELERDLalrv 489
Cdd:TIGR02169 759 ELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRI-------------EARLREIEQKL---- 821
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 490 KEVAELRGRLESSKHiddvdtslSLLQEISSLQEKMAAAGKEhQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENE 569
Cdd:TIGR02169 822 NRLTLEKEYLEKEIQ--------ELQEQRIDLKEQIKSIEKE-IENLNGKKEELEEELEELEAALRDLESRLGDLKKERD 892
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 570 SLKTKLDHANKEnsdvielwKSKLESAIASHQQAMEELKVSfnkgVGAQTAEFAELKTQMEKVKLDYENEMSNLKLKQEN 649
Cdd:TIGR02169 893 ELEAQLRELERK--------IEELEAQIEKKRKRLSELKAK----LEALEEELSEIEDPKGEDEEIPEEELSLEDVQAEL 960
|
330 340 350
....*....|....*....|....*....|....*....
gi 971420638 650 EK-SQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVE 687
Cdd:TIGR02169 961 QRvEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLE 999
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
620-1059 |
1.04e-03 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 43.30 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 620 AEFAELKTQMEKVKLDYEnemsnlKLKQENEKSQhlKEIEALKAKLLEVTEEKEQTLENLKAKLES----VEDQHLVEME 695
Cdd:pfam06160 107 EELDELLESEEKNREEVE------ELKDKYRELR--KTLLANRFSYGPAIDELEKQLAEIEEEFSQfeelTESGDYLEAR 178
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 696 DTLNKLQEaeikvkELDVLQAKCNEQTKLIGSLTQ-------QIRASEEKLLDLA-ALQKANSEGklEIQKLSEQLQAAE 767
Cdd:pfam06160 179 EVLEKLEE------ETDALEELMEDIPPLYEELKTelpdqleELKEGYREMEEEGyALEHLNVDK--EIQQLEEQLEENL 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 768 KQIQNLETEKVggsskvsnltkelqgkEQKLLDLEKNLsavNQVKDSLEKElqllkekftsaVDGAENAQRAMQETINKL 847
Cdd:pfam06160 251 ALLENLELDEA----------------EEALEEIEERI---DQLYDLLEKE-----------VDAKKYVEKNLPEIEDYL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 848 NQKEEQFALMSSELEQLKSNLTvmetkLKEREEREQQLTEAKVK-LENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQ 926
Cdd:pfam06160 301 EHAEEQNKELKEELERVQQSYT-----LNENELERVRGLEKQLEeLEKRYDEIVERLEEKEVAYSELQEELEEILEQLEE 375
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 927 IQLELTKANEKAVQLQKnVEQTAqkaeqsqqetlkthQEELKKMQDQLTDMKKQMETSQ-----NQYKDlqakYEKETSE 1001
Cdd:pfam06160 376 IEEEQEEFKESLQSLRK-DELEA--------------REKLDEFKLELREIKRLVEKSNlpglpESYLD----YFFDVSD 436
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*...
gi 971420638 1002 MITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQakadkrAEEVLQ 1059
Cdd:pfam06160 437 EIEDLADELNEVPLNMDEVNRLLDEAQDDVDTLYEKTEELIDNATL------AEQLIQ 488
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
1073-1191 |
1.06e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 43.66 E-value: 1.06e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1073 QEKIETL-ASLENSRQTNEKLQNELDMLKQNNLKNEEELtkskellnleNKKVEELKKEFEALKLAAAQKSQQ-LAALQE 1150
Cdd:PRK00409 515 KEKLNELiASLEELERELEQKAEEAEALLKEAEKLKEEL----------EEKKEKLQEEEDKLLEEAEKEAQQaIKEAKK 584
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 971420638 1151 ENVKLAEELGRSRDEVTSHQK---LEEERSVLNNQLLEMKKSLP 1191
Cdd:PRK00409 585 EADEIIKELRQLQKGGYASVKaheLIEARKRLNKANEKKEKKKK 628
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
753-922 |
1.14e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 43.53 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 753 KLEIQKLSEQLQAAEKQIQNLETEkvggsskvsnltKELQGKEQKLLDLEKnlsavnqvKDSLEKELQLLKEKFtsavDG 832
Cdd:COG0542 403 RMEIDSKPEELDELERRLEQLEIE------------KEALKKEQDEASFER--------LAELRDELAELEEEL----EA 458
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 833 AENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEreerEQQLTEAKVKlENDIAEIM-KSSG------- 904
Cdd:COG0542 459 LKARWEAEKELIEEIQELKEELEQRYGKIPELEKELAELEEELAE----LAPLLREEVT-EEDIAEVVsRWTGipvgkll 533
|
170
....*....|....*....
gi 971420638 905 -DSSAQLMKMNDElrLKER 922
Cdd:COG0542 534 eGEREKLLNLEEE--LHER 550
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
355-900 |
1.16e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.37 E-value: 1.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 355 QEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEmeaKMDQLRAMVEAADREKVELLNQLEE 434
Cdd:COG4913 287 QRRLELLEAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGD---RLEQLEREIERLERELEERERRRAR 363
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 435 EKRKVEDLQFRVEEEsitkgdlerkrqisedpenvatvseksrimelERDLALRVKEVAELRGRLEsskhiddvdtslsl 514
Cdd:COG4913 364 LEALLAALGLPLPAS--------------------------------AEEFAALRAEAAALLEALE-------------- 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 515 lQEISSLQEKMAAAGKEHQRemssLKEKFesseEALRKEIKTLSASNERMGKENESLKTKL-DHANKENSDV------IE 587
Cdd:COG4913 398 -EELEALEEALAEAEAALRD----LRREL----RELEAEIASLERRKSNIPARLLALRDALaEALGLDEAELpfvgelIE 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 588 L------WKSKLESAIasHQQAMeELKVSfnkgvGAQTAEFAEL--KTQMeKVKLDYEnemsnlklkQENEKSQHLKEIE 659
Cdd:COG4913 469 VrpeeerWRGAIERVL--GGFAL-TLLVP-----PEHYAAALRWvnRLHL-RGRLVYE---------RVRTGLPDPERPR 530
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 660 ALKAKLLEVTEEKEQTLEN-LKAKLESVEDQHLVEMEDTLNKLQEA---------------------------------- 704
Cdd:COG4913 531 LDPDSLAGKLDFKPHPFRAwLEAELGRRFDYVCVDSPEELRRHPRAitragqvkgngtrhekddrrrirsryvlgfdnra 610
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 705 --EIKVKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEgKLEIQKLSEQLQAAEKQIQNLETekvgGSS 782
Cdd:COG4913 611 klAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWD-EIDVASAEREIAELEAELERLDA----SSD 685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 783 KVSNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRAmqetinklnQKEEQFALMSSELE 862
Cdd:COG4913 686 DLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDL---------ARLELRALLEERFA 756
|
570 580 590
....*....|....*....|....*....|....*...
gi 971420638 863 QLKSNlTVMETKLKEREEREQQLTEAKVKLENDIAEIM 900
Cdd:COG4913 757 AALGD-AVERELRENLEERIDALRARLNRAEEELERAM 793
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
1001-1128 |
1.17e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 43.28 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1001 EMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRaEEVLQTMEKVTKEKDAIhqekIETLA 1080
Cdd:PRK00409 520 ELIASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDKLLEEAE-KEAQQAIKEAKKEADEI----IKELR 594
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 971420638 1081 SLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKEllnlENKKVEELK 1128
Cdd:PRK00409 595 QLQKGGYASVKAHELIEARKRLNKANEKKEKKKKK----QKEKQEELK 638
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
745-901 |
1.24e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.23 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 745 LQKANSEGKlEIQKlsEQLQAAEKQIQNL--ETEKvggssKVSNLTKELQGKEQKLLDLEKNlsavnqvkdsLEKELQLL 822
Cdd:PRK12704 44 LEEAKKEAE-AIKK--EALLEAKEEIHKLrnEFEK-----ELRERRNELQKLEKRLLQKEEN----------LDRKLELL 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 823 KEKftsavdgaenaQRAMQETINKLNQKEEQFALMSSELEQLKSN-LTVME--TKLKEREEREQQLTEAKVKLENDIAEI 899
Cdd:PRK12704 106 EKR-----------EEELEKKEKELEQKQQELEKKEEELEELIEEqLQELEriSGLTAEEAKEILLEKVEEEARHEAAVL 174
|
..
gi 971420638 900 MK 901
Cdd:PRK12704 175 IK 176
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
964-1314 |
1.31e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 43.35 E-value: 1.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 964 QEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEkETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKK 1043
Cdd:PRK01156 189 EEKLKSSNLELENIKKQIADDEKSHSITLKEIE-RLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAESDLSM 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1044 QAEQAKADKRAEEVLQTME--KVTKEKDAIhQEKIETLASLENSRQTNEKLQNELDMLkQNNLKNEEELTKSKELLNLEN 1121
Cdd:PRK01156 268 ELEKNNYYKELEERHMKIIndPVYKNRNYI-NDYFKYKNDIENKKQILSNIDAEINKY-HAIIKKLSVLQKDYNDYIKKK 345
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1122 KKVEELKKEFEALKlaaAQKSQQLAALQE-ENVKlaeelgrsrdevtshQKLEEERSVLNNQLLEMKKSLPSNTLRESTL 1200
Cdd:PRK01156 346 SRYDDLNNQILELE---GYEMDYNSYLKSiESLK---------------KKIEEYSKNIERMSAFISEILKIQEIDPDAI 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1201 KKEIDEERASLQKSISDTSALITQKD---EELEKLRNEITVLRGENA--------SAKTLQSVVKTLESDKLKLEEKVKN 1269
Cdd:PRK01156 408 KKELNEINVKLQDISSKVSSLNQRIRalrENLDELSRNMEMLNGQSVcpvcgttlGEEKSNHIINHYNEKKSRLEEKIRE 487
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|.
gi 971420638 1270 LEQKLKAKSEQPLTVTS-----PSGDIAANLLQDESAEDKQQEI-DFLNSV 1314
Cdd:PRK01156 488 IEIEVKDIDEKIVDLKKrkeylESEEINKSINEYNKIESARADLeDIKIKI 538
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
345-851 |
1.39e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 43.19 E-value: 1.39e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 345 ARKISGTTALQEALKE-KQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKmDQLRAMVEAADR 423
Cdd:pfam05557 2 AELIESKARLSQLQNEkKQMELEHKRARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAE-EALREQAELNRL 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 424 EK--VELLNQLEEEKRKVEdLQFRVEEESITKGDLERKRQI-SEDPENVATVSEKSRIMELERDLALRVKEVAELRGRLE 500
Cdd:pfam05557 81 KKkyLEALNKKLNEKESQL-ADAREVISCLKNELSELRRQIqRAELELQSTNSELEELQERLDLLKAKASEAEQLRQNLE 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 501 SSKH-IDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEkFESSEEALRKEIKTLSASNERMG---KENESLKTKLD 576
Cdd:pfam05557 160 KQQSsLAEAEQRIKELEFEIQSQEQDSEIVKNSKSELARIPE-LEKELERLREHNKHLNENIENKLllkEEVEDLKRKLE 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 577 HANKENSDVI--ELWKSKLESAIASHQQAMEELKVSF----------------NKGVGAQTAEFAELKTQMEKVKLDYEN 638
Cdd:pfam05557 239 REEKYREEAAtlELEKEKLEQELQSWVKLAQDTGLNLrspedlsrrieqlqqrEIVLKEENSSLTSSARQLEKARRELEQ 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 639 EMSNL--KLKQENEKSQHLKE-IEALKAKLLEVTEEKE---QTLENLKAKLESVE-----DQHLVEMEDTLNKLQEAEIK 707
Cdd:pfam05557 319 ELAQYlkKIEDLNKKLKRHKAlVRRLQRRVLLLTKERDgyrAILESYDKELTMSNyspqlLERIEEAEDMTQKMQAHNEE 398
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 708 VK-ELDVLQAKCNEQTKLIGSLTQ--QIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGgsskv 784
Cdd:pfam05557 399 MEaQLSVAEEELGGYKQQAQTLERelQALRQQESLADPSYSKEEVDSLRRKLETLELERQRLREQKNELEMELER----- 473
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 971420638 785 SNLTKELQGKEQKLLDLEKNLSAV-----NQVKDSLEKELQLLKEKFTSAVDGAENAQRaMQETINKLNQKE 851
Cdd:pfam05557 474 RCLQGDYDPKKTKVLHLSMNPAAEayqqrKNQLEKLQAEIERLKRLLKKLEDDLEQVLR-LPETTSTMNFKE 544
|
|
| tolA_full |
TIGR02794 |
TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the ... |
919-1082 |
1.40e-03 |
|
TolA protein; TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB. [Transport and binding proteins, Other, Cellular processes, Pathogenesis]
Pssm-ID: 274303 [Multi-domain] Cd Length: 346 Bit Score: 42.53 E-value: 1.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 919 LKERQLEQIQLELTKANEKAVQLQKNVEQTA------QKAEQSQQETLKTHQEELKKMQdQLTDMKKQMETSQNQYKDLQ 992
Cdd:TIGR02794 47 AVAQQANRIQQQKKPAAKKEQERQKKLEQQAeeaekqRAAEQARQKELEQRAAAEKAAK-QAEQAAKQAEEKQKQAEEAK 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 993 AKYEKET---SEMITKHDADIKGFKQNLLDAE-EALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVTKEK 1068
Cdd:TIGR02794 126 AKQAAEAkakAEAEAERKAKEEAAKQAEEEAKaKAAAEAKKKAEEAKKKAEAEAKAKAEAEAKAKAEEAKAKAEAAKAKA 205
|
170
....*....|....
gi 971420638 1069 DAIHQEKIETLASL 1082
Cdd:TIGR02794 206 AAEAAAKAEAEAAA 219
|
|
| PspA |
COG1842 |
Phage shock protein A [Transcription, Signal transduction mechanisms]; |
864-1061 |
1.56e-03 |
|
Phage shock protein A [Transcription, Signal transduction mechanisms];
Pssm-ID: 441447 [Multi-domain] Cd Length: 217 Bit Score: 41.73 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 864 LKSNLTVMETKLkerEEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMndelrlkERQLEQIQLELTKANEKAVQ-LQ 942
Cdd:COG1842 10 IRANINALLDKA---EDPEKMLDQAIRDMEEDLVEARQALAQVIANQKRL-------ERQLEELEAEAEKWEEKARLaLE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 943 KNVEQTAQKA---EQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEK--------ETSEMITKHDADIk 1011
Cdd:COG1842 80 KGREDLAREAlerKAELEAQAEALEAQLAQLEEQVEKLKEALRQLESKLEELKAKKDTlkarakaaKAQEKVNEALSGI- 158
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 971420638 1012 gfkqNLLDAEEALKAAQKKNDELETQAE---------ELKKQAEQAKADKRAEEVLQTM 1061
Cdd:COG1842 159 ----DSDDATSALERMEEKIEEMEARAEaaaelaagdSLDDELAELEADSEVEDELAAL 213
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1011-1174 |
1.60e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.83 E-value: 1.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1011 KGFKQNLLDAEEALKAAQKKNDELETQAEEL--------KKQAEQAKADKRAEEVLQTMEKVTKEKDAIH---------- 1072
Cdd:COG4717 60 KPQGRKPELNLKELKELEEELKEAEEKEEEYaelqeeleELEEELEELEAELEELREELEKLEKLLQLLPlyqelealea 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1073 --QEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKK-VEELKKEFEALKLAAAQKSQQLAALQ 1149
Cdd:COG4717 140 elAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEeLQDLAEELEELQQRLAELEEELEEAQ 219
|
170 180
....*....|....*....|....*
gi 971420638 1150 EENVKLAEELGRSRDEVTSHQKLEE 1174
Cdd:COG4717 220 EELEELEEELEQLENELEAAALEER 244
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
365-566 |
1.64e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.08 E-value: 1.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 365 IEQLLAERDLERAEVAKATShvGEIEQELALVRDghdrHVLEMEAKMDQLRA---MVEAADREKVeLLNQLEEEKRKVED 441
Cdd:COG3206 158 AEAYLEQNLELRREEARKAL--EFLEEQLPELRK----ELEEAEAALEEFRQkngLVDLSEEAKL-LLQQLSELESQLAE 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 442 LQFRVEEESITKGDLERkrQISEDPENVATVSEKSRIMELERDLALRVKEVAELRGRLeSSKHIDDVdtslSLLQEISSL 521
Cdd:COG3206 231 ARAELAEAEARLAALRA--QLGSGPDALPELLQSPVIQQLRAQLAELEAELAELSARY-TPNHPDVI----ALRAQIAAL 303
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 971420638 522 QEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGK 566
Cdd:COG3206 304 RAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPE 348
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1032-1225 |
1.82e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.98 E-value: 1.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1032 DELETQAEELKKQ----AEQAKADKRAEEVLQTMEKVTKekdaiHQEKIETL-ASLENSRQTNEKLQNELDMLKQNNLKN 1106
Cdd:PRK11281 39 ADVQAQLDALNKQklleAEDKLVQQDLEQTLALLDKIDR-----QKEETEQLkQQLAQAPAKLRQAQAELEALKDDNDEE 113
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1107 EEELTKSKELLNLEnKKVEELKKEFEALKLAAAQKSQQLAALQE----------ENVKLAEEL---------GRSRDEVT 1167
Cdd:PRK11281 114 TRETLSTLSLRQLE-SRLAQTLDQLQNAQNDLAEYNSQLVSLQTqperaqaalyANSQRLQQIrnllkggkvGGKALRPS 192
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 971420638 1168 SHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEID---EERASLQKSISDTSALITQK 1225
Cdd:PRK11281 193 QRVLLQAEQALLNAQNDLQRKSLEGNTQLQDLLQKQRDyltARIQRLEHQLQLLQEAINSK 253
|
|
| Surf_Exclu_PgrA |
TIGR04320 |
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface ... |
932-1046 |
1.85e-03 |
|
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface proteins of a number of Firmutes. Many members have LPXTG C-terminal anchoring motifs and a substantial number have the KxYKxGKxW putative sorting signal at the N-terminus. The tetracycline resistance plasmid pCF10 in Enterococcus faecalis promotes conjugal plasmid transfer in response to sex pheromones, but PgrA/Sec10 encoded by that plasmid, a member of this family, specifically inhibits the ability of cells to receive homologous plasmids. The phenomenon is called surface exclusion.
Pssm-ID: 275124 [Multi-domain] Cd Length: 356 Bit Score: 42.41 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 932 TKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQ-YKDLQAKYEKEtsemitkhdadi 1010
Cdd:TIGR04320 256 LAALQAKLATAQADLAAAQTALNTAQAALTSAQTAYAAAQAALATAQKELANAQAQaLQTAQNNLATA------------ 323
|
90 100 110
....*....|....*....|....*....|....*.
gi 971420638 1011 kgfKQNLLDAEEALKAAQKKNDELETQAEELKKQAE 1046
Cdd:TIGR04320 324 ---QAALANAEARLAKAKEALANLNADLAKKQAALD 356
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
1091-1242 |
1.93e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.45 E-value: 1.93e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1091 KLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRD--EVTS 1168
Cdd:COG1579 14 ELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNVRNnkEYEA 93
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 971420638 1169 HQK----LEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGE 1242
Cdd:COG1579 94 LQKeiesLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEELAELEAELEELEAEREELAAK 171
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
754-928 |
1.96e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 42.89 E-value: 1.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 754 LEIQK---LSEQL-QAAEKQIQNlETEKVGGS-SKVSNLTKELqgkEQKLLDLEKNLSAVNQVKDSLEKELQLLKEKFTS 828
Cdd:PRK00409 491 FEIAKrlgLPENIiEEAKKLIGE-DKEKLNELiASLEELEREL---EQKAEEAEALLKEAEKLKEELEEKKEKLQEEEDK 566
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 829 AVDGAE--------NAQRAMQETINKLN--QKEEQFALMSSELE----QLKSNLTVMETKLKEREEREQQLT---EAKVK 891
Cdd:PRK00409 567 LLEEAEkeaqqaikEAKKEADEIIKELRqlQKGGYASVKAHELIearkRLNKANEKKEKKKKKQKEKQEELKvgdEVKYL 646
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 971420638 892 LENDIAEIMKSSGDSSAQ----LMKMndelRLKERQLEQIQ 928
Cdd:PRK00409 647 SLGQKGEVLSIPDDKEAIvqagIMKM----KVPLSDLEKIQ 683
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
548-781 |
2.15e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 2.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 548 EALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELWKsKLESAIASHQQAMEELKVSFNKGVGAQTAEFAELKT 627
Cdd:COG4942 30 EQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIR-ALEQELAALEAELAELEKEIAELRAELEAQKEELAE 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 628 QMEKVKLDYENEMSNLKLKQENeKSQHLKEIEALKAkLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIK 707
Cdd:COG4942 109 LLRALYRLGRQPPLALLLSPED-FLDAVRRLQYLKY-LAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEE 186
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 971420638 708 VKELDVLQAkcnEQTKLIGSLTQQIRASEEKlldLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGS 781
Cdd:COG4942 187 RAALEALKA---ERQKLLARLEKELAELAAE---LAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGK 254
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
858-1352 |
2.29e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 42.65 E-value: 2.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 858 SSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEK 937
Cdd:TIGR00618 162 SKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQS 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 938 AVQLQKnvEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKqmetsQNQYKDLQAKYEK--ETSEMITKHDADIKGFKQ 1015
Cdd:TIGR00618 242 HAYLTQ--KREAQEEQLKKQQLLKQLRARIEELRAQEAVLEE-----TQERINRARKAAPlaAHIKAVTQIEQQAQRIHT 314
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1016 NLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNE 1095
Cdd:TIGR00618 315 ELQSKMRSRAKLLMKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQK 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1096 LDMLKQNNLKNEEELTKSKELLNLEN---------KKVEELKKEFEALKLAAAQKSQQLA-----ALQEENVKLAEELGR 1161
Cdd:TIGR00618 395 LQSLCKELDILQREQATIDTRTSAFRdlqgqlahaKKQQELQQRYAELCAAAITCTAQCEklekiHLQESAQSLKEREQQ 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1162 SRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKE----------------IDEERASLQKSISDTSALITQK 1225
Cdd:TIGR00618 475 LQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPArqdidnpgpltrrmqrGEQTYAQLETSEEDVYHQLTSE 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1226 DEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQPLtvtspsGDIAANLLQDESAEDKQ 1305
Cdd:TIGR00618 555 RKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLA------CEQHALLRKLQPEQDLQ 628
|
490 500 510 520
....*....|....*....|....*....|....*....|....*..
gi 971420638 1306 QeidflnsVIVDLQRRNEELNLKiqrmcEAALNGnEEETINYDSEEE 1352
Cdd:TIGR00618 629 D-------VRLHLQQCSQELALK-----LTALHA-LQLTLTQERVRE 662
|
|
| PRK15374 |
PRK15374 |
type III secretion system needle tip complex protein SipB; |
967-1161 |
2.74e-03 |
|
type III secretion system needle tip complex protein SipB;
Pssm-ID: 185272 [Multi-domain] Cd Length: 593 Bit Score: 42.26 E-value: 2.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 967 LKKMQDQLTDMKKQMETSQNQYKDLQAKYE---KETSEMITKHDADIKGF---KQNLLDAEEALKAAQKKNDELETQAEE 1040
Cdd:PRK15374 101 LSQLESRLAVWQAMIESQKEMGIQVSKEFQtalGEAQEATDLYEASIKKTdtaKSVYDAAEKKLTQAQNKLQSLDPADPG 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1041 LKKqaEQAKADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLEN--------SRQTNEKLQNELDMLKQNNLKNEEELTK 1112
Cdd:PRK15374 181 YAQ--AEAAVEQAGKEATEAKEALDKATDATVKAGTDAKAKAEKadniltkfQGTANAASQNQVSQGEQDNLSNVARLTM 258
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....
gi 971420638 1113 -SKELLNLENKKVEELKKE----FEALKLAAAQKSQQLAALQEENVKLAEELGR 1161
Cdd:PRK15374 259 lMAMFIEIVGKNTEESLQNdlalFNALQEGRQAEMEKKSAEFQEETRKAEETNR 312
|
|
| WEMBL |
pfam05701 |
Weak chloroplast movement under blue light; WEMBL consists of several plant proteins required ... |
786-1090 |
3.41e-03 |
|
Weak chloroplast movement under blue light; WEMBL consists of several plant proteins required for the chloroplast avoidance response under high intensity blue light. This avoidance response consists in the relocation of chloroplasts on the anticlinal side of exposed cells. Acts in association with PMI2 to maintain the velocity of chloroplast photo-relocation movement via the regulation of cp-actin filaments. Thus several member-sequences are described as "myosin heavy chain-like".
Pssm-ID: 461718 [Multi-domain] Cd Length: 562 Bit Score: 41.94 E-value: 3.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 786 NLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQL---LKEKFTSAVDGAENaQRAMQETINKLNQKEEQFALMSS--E 860
Cdd:pfam05701 223 NWEKELKQAEEELQRLNQQLLSAKDLKSKLETASALlldLKAELAAYMESKLK-EEADGEGNEKKTSTSIQAALASAkkE 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 861 LEQLKSN----------LTVMETKLKEREEREQQlteakvklenDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLE 930
Cdd:pfam05701 302 LEEVKANiekakdevncLRVAAASLRSELEKEKA----------ELASLRQREGMASIAVSSLEAELNRTKSEIALVQAK 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 931 LTKANEKAVQLQKNVEQTAQKAE------QSQQETLKTHQEELKK-------MQDQLTDMKKQMETSQNQYK----DLQA 993
Cdd:pfam05701 372 EKEAREKMVELPKQLQQAAQEAEeakslaQAAREELRKAKEEAEQakaaastVESRLEAVLKEIEAAKASEKlalaAIKA 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 994 KYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKadkraEEVLQTMEKVTKEKDAIHQ 1073
Cdd:pfam05701 452 LQESESSAESTNQEDSPRGVTLSLEEYYELSKRAHEAEELANKRVAEAVSQIEEAK-----ESELRSLEKLEEVNREMEE 526
|
330
....*....|....*..
gi 971420638 1074 EKIETLASLENSRQTNE 1090
Cdd:pfam05701 527 RKEALKIALEKAEKAKE 543
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
513-738 |
3.88e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 41.29 E-value: 3.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 513 SLLQEISSLQEKMAAAGKEHQREMSSLKEkFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKEnsdvIELWKSK 592
Cdd:COG4942 31 QLQQEIAELEKELAALKKEEKALLKQLAA-LERRIAALARRIRALEQELAALEAELAELEKEIAELRAE----LEAQKEE 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 593 LESAIASHQQA--MEELKVSFNKGVGAQTAefaelktqmekVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTE 670
Cdd:COG4942 106 LAELLRALYRLgrQPPLALLLSPEDFLDAV-----------RRLQYLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 971420638 671 EKEQTLENLKAKLESVEDQhLVEMEDTLNKLQEAEIKV-KELDVLQAKCNEQTKLIGSLTQQIRASEEK 738
Cdd:COG4942 175 ELEALLAELEEERAALEAL-KAERQKLLARLEKELAELaAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
418-958 |
3.95e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 41.70 E-value: 3.95e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 418 VEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLerKRQISEDPENVATVSEKSRIMELE-RDLALRVKEVAELR 496
Cdd:pfam01576 491 LRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLSDM--KKKLEEDAGTLEALEEGKKRLQRElEALTQQLEEKAAAY 568
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 497 GRLESSK-----HIDDVDTSL-SLLQEISSLQEKM--------------AAAGKEHQREMSSLKEKfESSEEALRKEIKT 556
Cdd:pfam01576 569 DKLEKTKnrlqqELDDLLVDLdHQRQLVSNLEKKQkkfdqmlaeekaisARYAEERDRAEAEAREK-ETRALSLARALEE 647
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 557 LSASNERMGKENESLKTKLDHANKENSD----VIELWKSK--LESAIASHQQAMEELKVSFnkgvgaQTAEFAELKTQ-- 628
Cdd:pfam01576 648 ALEAKEELERTNKQLRAEMEDLVSSKDDvgknVHELERSKraLEQQVEEMKTQLEELEDEL------QATEDAKLRLEvn 721
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 629 MEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENlKAKLEsVEDQHLVEMEDTLNKLQEAeiKV 708
Cdd:pfam01576 722 MQALKAQFERDLQARDEQGEEKRRQLVKQVRELEAELEDERKQRAQAVAA-KKKLE-LDLKELEAQIDAANKGREE--AV 797
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 709 KELDVLQAkcneQTKLIGSLTQQIRASEEKLLDLAALQKANSEG-KLEIQKLSEQLQAAEKQIQNLETEK-------VGG 780
Cdd:pfam01576 798 KQLKKLQA----QMKDLQRELEEARASRDEILAQSKESEKKLKNlEAELLQLQEDLAASERARRQAQQERdeladeiASG 873
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 781 SSKVSNLTKELQGKEQKLLDLEKNL----SAVNQVKDSLEKeLQLLKEKFTSAVDGAENAQRAMQETINKLNQKEEQFAL 856
Cdd:pfam01576 874 ASGKSALQDEKRRLEARIAQLEEELeeeqSNTELLNDRLRK-STLQVEQLTTELAAERSTSQKSESARQQLERQNKELKA 952
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 857 MSSELEQ-----LKSNLTVMETKLKEREE------REQQLTEAKV-KLENDIAEIM-------KSSGDSSAQLMKMNDEL 917
Cdd:pfam01576 953 KLQEMEGtvkskFKSSIAALEAKIAQLEEqleqesRERQAANKLVrRTEKKLKEVLlqvederRHADQYKDQAEKGNSRM 1032
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 971420638 918 RLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQE 958
Cdd:pfam01576 1033 KQLKRQLEEAEEEASRANAARRKLQRELDDATESNESMNRE 1073
|
|
| ATG16 |
pfam08614 |
Autophagy protein 16 (ATG16); Autophagy is a ubiquitous intracellular degradation system for ... |
845-979 |
3.97e-03 |
|
Autophagy protein 16 (ATG16); Autophagy is a ubiquitous intracellular degradation system for eukaryotic cells. During autophagy, cytoplasmic components are enclosed in autophagosomes and delivered to lysosomes/vacuoles. ATG16 (also known as Apg16) has been shown to be bind to Apg5 and is required for the function of the Apg12p-Apg5p conjugate in the yeast autophagy pathway.
Pssm-ID: 462536 [Multi-domain] Cd Length: 176 Bit Score: 39.92 E-value: 3.97e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 845 NKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREERE-----QQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRL 919
Cdd:pfam08614 10 NRLLDRTALLEAENAKLQSEPESVLPSTSSSKLSKASPqsasiQSLEQLLAQLREELAELYRSRGELAQRLVDLNEELQE 89
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 971420638 920 KERQLEQIQLELTKANEKAVQLQKNVEQTA------QKAEQSQQETLKTHQEELKKMQDQLTDMKK 979
Cdd:pfam08614 90 LEKKLREDERRLAALEAERAQLEEKLKDREeelrekRKLNQDLQDELVALQLQLNMAEEKLRKLEK 155
|
|
| Fib_alpha |
pfam08702 |
Fibrinogen alpha/beta chain family; Fibrinogen is a protein involved in platelet aggregation ... |
1172-1275 |
4.85e-03 |
|
Fibrinogen alpha/beta chain family; Fibrinogen is a protein involved in platelet aggregation and is essential for the coagulation of blood. This domain forms part of the central coiled coiled region of the protein which is formed from two sets of three non-identical chains (alpha, beta and gamma).
Pssm-ID: 462570 Cd Length: 143 Bit Score: 39.06 E-value: 4.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1172 LEEERSVlNNQLLEMKKSLP--SNTLRES-TLKKEIDEERASLQKSISDTSALITQKDEELEK--LRNEITVLRGENaSA 1246
Cdd:pfam08702 27 LKYERDV-DKDLQKLENLLDqiSNSTSSAdELVKQIKDSLRERQKSSPDNDNVYNKSSSMLEEriAYIKETVDTQES-NI 104
|
90 100
....*....|....*....|....*....
gi 971420638 1247 KTLQSVVKTLESDKLKLEEKVKNLEQKLK 1275
Cdd:pfam08702 105 RVLQNILDSNRQKIQRLEQDIDQLERKCK 133
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
376-1002 |
4.86e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 41.26 E-value: 4.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 376 RAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLRamveaadrekvellNQLEEEKRKVEDLQFRVEeesitkgd 455
Cdd:pfam05557 1 RAELIESKARLSQLQNEKKQMELEHKRARIELEKKASALK--------------RQLDRESDRNQELQKRIR-------- 58
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 456 LERKRQisedpenvATVSEKSRIMELERDLALRVKEVAELRGRLESSKHIDDVDTSLSLLQEISSLQEKMAAAgkehQRE 535
Cdd:pfam05557 59 LLEKRE--------AEAEEALREQAELNRLKKKYLEALNKKLNEKESQLADAREVISCLKNELSELRRQIQRA----ELE 126
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 536 MSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHankensdviELWKSKLESAIASHQQAMEELKVSfnkgv 615
Cdd:pfam05557 127 LQSTNSELEELQERLDLLKAKASEAEQLRQNLEKQQSSLAEA---------EQRIKELEFEIQSQEQDSEIVKNS----- 192
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 616 GAQTAEFAELKTQMEkvkldyenemsnlKLKQENEKSQHLKEIEALkaklleVTEEKeqtlENLKAKLESVEDqhlveME 695
Cdd:pfam05557 193 KSELARIPELEKELE-------------RLREHNKHLNENIENKLL------LKEEV----EDLKRKLEREEK-----YR 244
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 696 DTLNKLQeaeikvKELDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLET 775
Cdd:pfam05557 245 EEAATLE------LEKEKLEQELQSWVKLAQDTGLNLRSPEDLSRRIEQLQQREIVLKEENSSLTSSARQLEKARRELEQ 318
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 776 EKVGGSSKVSNLTKELQGKEQKLLDLEKNLSAVNQVKD-------SLEKELQlLKEKFTSAVDGAENAQRAMQETINKLN 848
Cdd:pfam05557 319 ELAQYLKKIEDLNKKLKRHKALVRRLQRRVLLLTKERDgyraileSYDKELT-MSNYSPQLLERIEEAEDMTQKMQAHNE 397
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 849 QKEEQFALMSSELEQLKSNLTVMETKLKEReeREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQ-- 926
Cdd:pfam05557 398 EMEAQLSVAEEELGGYKQQAQTLERELQAL--RQQESLADPSYSKEEVDSLRRKLETLELERQRLREQKNELEMELERrc 475
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 971420638 927 IQLELTKANEKAVQLQKNveqTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEM 1002
Cdd:pfam05557 476 LQGDYDPKKTKVLHLSMN---PAAEAYQQRKNQLEKLQAEIERLKRLLKKLEDDLEQVLRLPETTSTMNFKEVLDL 548
|
|
| PRK05431 |
PRK05431 |
seryl-tRNA synthetase; Provisional |
670-773 |
5.35e-03 |
|
seryl-tRNA synthetase; Provisional
Pssm-ID: 235461 [Multi-domain] Cd Length: 425 Bit Score: 40.82 E-value: 5.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 670 EEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQeaeikvKELDVLQAKCNEQTKLIGsltqQIRASEEKLLDLAALQKAN 749
Cdd:PRK05431 9 ENPEAVKEALAKRGFPLDVDELLELDEERRELQ------TELEELQAERNALSKEIG----QAKRKGEDAEALIAEVKEL 78
|
90 100
....*....|....*....|....
gi 971420638 750 SEgklEIQKLSEQLQAAEKQIQNL 773
Cdd:PRK05431 79 KE---EIKALEAELDELEAELEEL 99
|
|
| Leu_zip |
pfam15294 |
Leucine zipper; This family includes Leucine zipper transcription factor-like protein 1 ... |
548-682 |
5.40e-03 |
|
Leucine zipper; This family includes Leucine zipper transcription factor-like protein 1 (LZTFL1) and Leucine zipper protein 2 (LUZP2).
Pssm-ID: 464620 [Multi-domain] Cd Length: 276 Bit Score: 40.46 E-value: 5.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 548 EALRKEIKTLSASNERMGKENESLKTKLDHANKEnsdvielwKSKLESAIASHQQAMEELKVSFNkgvgaQTAEFAELKT 627
Cdd:pfam15294 129 ALLHMEIERLKEENEKLKERLKTLESQATQALDE--------KSKLEKALKDLQKEQGAKKDVKS-----NLKEISDLEE 195
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 971420638 628 QMEKVKLDYENEMSNLKlkqeNEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAK 682
Cdd:pfam15294 196 KMAALKSDLEKTLNAST----ALQKSLEEDLASTKHELLKVQEQLEMAEKELEKK 246
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
801-1206 |
6.15e-03 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 41.19 E-value: 6.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 801 LEKNLSAVNQVKDSLEKelqllKEKFTSAVDGAENAQRAMQETINKLNQKEEQFA--LMSSELEQ--LKSNLTVMETKLK 876
Cdd:PRK10929 50 LQSALNWLEERKGSLER-----AKQYQQVIDNFPKLSAELRQQLNNERDEPRSVPpnMSTDALEQeiLQVSSQLLEKSRQ 124
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 877 EREERE-------------QQLTEAKvKLENDIAEIMKSSGDSSAQLmkmndelrlkerqlEQIQLELTKANEKAVQLQK 943
Cdd:PRK10929 125 AQQEQDrareisdslsqlpQQQTEAR-RQLNEIERRLQTLGTPNTPL--------------AQAQLTALQAESAALKALV 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 944 NVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDAD-----IKGFKQNll 1018
Cdd:PRK10929 190 DELELAQLSANNRQELARLRSELAKKRSQQLDAYLQALRNQLNSQRQREAERALESTELLAEQSGDlpksiVAQFKIN-- 267
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1019 daeealkaaQKKNDELETQAEELKKQA-EQAKADKRAEEVLQTMEKVTkekdaihqEKIETLASlenSRQTNEKLQNELD 1097
Cdd:PRK10929 268 ---------RELSQALNQQAQRMDLIAsQQRQAASQTLQVRQALNTLR--------EQSQWLGV---SNALGEALRAQVA 327
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1098 MLKqnnlkneeELTKSKEL-LNLENKKVEELKkeFEALklaaAQKSQQLAAL-QEENVKLAEELGRSRDEVTSHQK--LE 1173
Cdd:PRK10929 328 RLP--------EMPKPQQLdTEMAQLRVQRLR--YEDL----LNKQPQLRQIrQADGQPLTAEQNRILDAQLRTQRelLN 393
|
410 420 430
....*....|....*....|....*....|...
gi 971420638 1174 EERSVLNNQLLEMKKSLPSNTLRESTLkKEIDE 1206
Cdd:PRK10929 394 SLLSGGDTLILELTKLKVANSQLEDAL-KEVNE 425
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
360-505 |
6.16e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.88 E-value: 6.16e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 360 EKQQHIEQLL---AERDLERAEVAKATSHVGEIEQElalvrdghDRHVLEMEAKMDQlRAMVEAADREKVeLLNQLEEEK 436
Cdd:pfam17380 457 ERQQQVERLRqqeEERKRKKLELEKEKRDRKRAEEQ--------RRKILEKELEERK-QAMIEEERKRKL-LEKEMEERQ 526
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 971420638 437 RKVEDLQFR--VEEESITKGDLERKRQISEDPENVATVSEKSRIMELERDLALRVKEVAELRGRLESSKHI 505
Cdd:pfam17380 527 KAIYEEERRreAEEERRKQQEMEERRRIQEQMRKATEERSRLEAMEREREMMRQIVESEKARAEYEATTPI 597
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
992-1190 |
6.18e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.52 E-value: 6.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 992 QAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKK-----QAEQAKADKRAEEVLQTMEKVTK 1066
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARriralEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1067 EKDAIHQEKIETLASLE-NSRQTNEKL----QNELDMLK---------QNNLKNEEELTKSKELLNLENKKVEELKKEFE 1132
Cdd:COG4942 98 ELEAQKEELAELLRALYrLGRQPPLALllspEDFLDAVRrlqylkylaPARREQAEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 971420638 1133 ALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSH-QKLEEERSVLNNQLLEMKKSL 1190
Cdd:COG4942 178 ALLAELEEERAALEALKAERQKLLARLEKELAELAAElAELQQEAEELEALIARLEAEA 236
|
|
| PYST-B |
TIGR01597 |
Plasmodium yoelii subtelomeric family PYST-B; This model represents a paralogous family of ... |
986-1112 |
6.23e-03 |
|
Plasmodium yoelii subtelomeric family PYST-B; This model represents a paralogous family of Plasmodium yoelii genes preferentially located in the subtelomeric regions of the chromosomes. There are no obvious homologs to these genes in any other organism.
Pssm-ID: 130658 Cd Length: 255 Bit Score: 40.26 E-value: 6.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 986 NQYKDLQAKyEKETSEMITKHDADIKGFKQN--LLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEK 1063
Cdd:TIGR01597 69 NQFNDCNDD-DKEIAHLRNIIDSHIKKHKERntLPDLNNVDKKTKKLINKLQKELEELKKELDNEMNDELTIQPIHDKII 147
|
90 100 110 120
....*....|....*....|....*....|....*....|....*....
gi 971420638 1064 VTKEKDAIHQEKiETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTK 1112
Cdd:TIGR01597 148 IKKDENNSVSEH-EDFKQLENEKNSSVSEHEEFDIASSDNLKIKRKLKK 195
|
|
| COG1340 |
COG1340 |
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown]; |
996-1277 |
6.69e-03 |
|
Uncharacterized coiled-coil protein, contains DUF342 domain [Function unknown];
Pssm-ID: 440951 [Multi-domain] Cd Length: 297 Bit Score: 40.28 E-value: 6.69e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 996 EKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAE-EVLQTMEKVTKEKDAIHQE 1074
Cdd:COG1340 10 LEELEEKIEELREEIEELKEKRDELNEELKELAEKRDELNAQVKELREEAQELREKRDELnEKVKELKEERDELNEKLNE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1075 KIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENK---KVEELKKEFEALKlAAAQKSQQLAALQEE 1151
Cdd:COG1340 90 LREELDELRKELAELNKAGGSIDKLRKEIERLEWRQQTEVLSPEEEKElveKIKELEKELEKAK-KALEKNEKLKELRAE 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1152 NVKLAEELGRSRDEVTshqKLEEERSVLNNQLLEMKKslpsntlRESTLKKEIDE---ERASLQKSISDTSALITQKDEE 1228
Cdd:COG1340 169 LKELRKEAEEIHKKIK---ELAEEAQELHEEMIELYK-------EADELRKEADElhkEIVEAQEKADELHEEIIELQKE 238
|
250 260 270 280
....*....|....*....|....*....|....*....|....*....
gi 971420638 1229 LEKLRNEITVLRGENASAKtlqsvvktLESDKLKLEEKVKNLEQKLKAK 1277
Cdd:COG1340 239 LRELRKELKKLRKKQRALK--------REKEKEELEEKAEEIFEKLKKG 279
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
911-1232 |
6.72e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.66 E-value: 6.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 911 MKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKThQEELKKMQDQLTDMKKQMETSQNQYKD 990
Cdd:COG4372 27 AALSEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQL-EEELEELNEQLQAAQAELAQAQEELES 105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 991 LQAKYEKETSEMitkhdADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQTMEKVTKEKDA 1070
Cdd:COG4372 106 LQEEAEELQEEL-----EELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAE 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1071 IHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQE 1150
Cdd:COG4372 181 AEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEI 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1151 ENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELE 1230
Cdd:COG4372 261 EELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELA 340
|
..
gi 971420638 1231 KL 1232
Cdd:COG4372 341 DL 342
|
|
| tolA |
PRK09510 |
cell envelope integrity inner membrane protein TolA; Provisional |
923-1070 |
7.07e-03 |
|
cell envelope integrity inner membrane protein TolA; Provisional
Pssm-ID: 236545 [Multi-domain] Cd Length: 387 Bit Score: 40.56 E-value: 7.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 923 QLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQEtlktHQEELKKM-QDQLTDMKKQMETSQNQYKDLQAKYEKETSE 1001
Cdd:PRK09510 63 QYNRQQQQQKSAKRAEEQRKKKEQQQAEELQQKQAA----EQERLKQLeKERLAAQEQKKQAEEAAKQAALKQKQAEEAA 138
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 971420638 1002 MITKHDADIKGFKQNLLDAEEALKAAQ--KKNDELETQ---AEELKKQAEQAKADKRAEEVLQTMEKVTKEKDA 1070
Cdd:PRK09510 139 AKAAAAAKAKAEAEAKRAAAAAKKAAAeaKKKAEAEAAkkaAAEAKKKAEAEAAAKAAAEAKKKAEAEAKKKAA 212
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
553-824 |
7.68e-03 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 40.77 E-value: 7.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 553 EIKTLSAsnerMGKENeslKTKLDHANkENSDVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFAELKTQMEKV 632
Cdd:PHA02562 161 DISVLSE----MDKLN---KDKIRELN-QQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQNKYDELVEEAKTI 232
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 633 KLDYE---NEMSNLKLKQENeKSQHLKEIEALKAKLlevteekEQTLENLKAKLESVEDQHLV-----EMEDTLNKLQEA 704
Cdd:PHA02562 233 KAEIEeltDELLNLVMDIED-PSAALNKLNTAAAKI-------KSKIEQFQKVIKMYEKGGVCptctqQISEGPDRITKI 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 705 EIKVKELdvlqakcneqTKLIGSLTQQIRASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVGGSSKV 784
Cdd:PHA02562 305 KDKLKEL----------QHSLEKLDTAIDELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEF 374
|
250 260 270 280
....*....|....*....|....*....|....*....|
gi 971420638 785 SNLTKELQGKEQKLLDLEKNLSAVNQVKDSLEKELQLLKE 824
Cdd:PHA02562 375 VDNAEELAKLQDELDKIVKTKSELVKEKYHRGIVTDLLKD 414
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
802-1109 |
7.82e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 40.66 E-value: 7.82e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 802 EKNLSAVNQVKDSLEKELQLLKEKFTSAVDGAENAQRamqeTINKLNQKEEQfAL-----MSSELEQLKSNLTVMETKLK 876
Cdd:PLN02939 106 EAIAAIDNEQQTNSKDGEQLSDFQLEDLVGMIQNAEK----NILLLNQARLQ-ALedlekILTEKEALQGKINILEMRLS 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 877 EREEREQqlTEAKVKLENDIAEimkssgdssAQLMKMNDEL----RLKERQLEQIQLELTKANEKAVQLQKNVEqtaqka 952
Cdd:PLN02939 181 ETDARIK--LAAQEKIHVEILE---------EQLEKLRNELlirgATEGLCVHSLSKELDVLKEENMLLKDDIQ------ 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 953 eqsqqeTLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMIT----KHDADIKGFK--QNLLD--AEEAL 1024
Cdd:PLN02939 244 ------FLKAELIEVAETEERVFKLEKERSLLDASLRELESKFIVAQEDVSKlsplQYDCWWEKVEnlQDLLDraTNQVE 317
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1025 KAAQ--KKNDELETQAEELKKQAEQAKADKRAEEVLQTM-EKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELdmlkq 1101
Cdd:PLN02939 318 KAALvlDQNQDLRDKVDKLEASLKEANVSKFSSYKVELLqQKLKLLEERLQASDHEIHSYIQLYQESIKEFQDTL----- 392
|
....*...
gi 971420638 1102 NNLKNEEE 1109
Cdd:PLN02939 393 SKLKEESK 400
|
|
| Laminin_I |
pfam06008 |
Laminin Domain I; coiled-coil structure. It has been suggested that the domains I and II from ... |
917-1145 |
7.87e-03 |
|
Laminin Domain I; coiled-coil structure. It has been suggested that the domains I and II from laminin A, B1 and B2 may come together to form a triple helical coiled-coil structure.
Pssm-ID: 310534 [Multi-domain] Cd Length: 258 Bit Score: 39.70 E-value: 7.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 917 LRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQ------EELKKMQDQLTDMKKQMETSQNQYKD 990
Cdd:pfam06008 35 ENAHKIQIEILEKELSSLAQETEELQKKATQTLAKAQQVNAESERTLGhakelaEAIKNLIDNIKEINEKVATLGENDFA 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 991 LQAKYEKETSEMITKHDADIKG--FKQNLLDAEEALKAAQKKNDELETQAEELKKQaeqakadkraeevLQTMEKVTKEK 1068
Cdd:pfam06008 115 LPSSDLSRMLAEAQRMLGEIRSrdFGTQLQNAEAELKAAQDLLSRIQTWFQSPQEE-------------NKALANALRDS 181
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 971420638 1069 DAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLkneEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQL 1145
Cdd:pfam06008 182 LAEYEAKLSDLRELLREAAAKTRDANRLNLANQANL---REFQRKKEEVSEQKNQLEETLKTARDSLDAANLLLQEI 255
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
422-988 |
8.17e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 40.83 E-value: 8.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 422 DREKVELL---NQLEEEKRKVEDLQFRVEEESITKGDLERKRQISEDPENVATVSEKSRIMELERDLALRVKEVAELRGR 498
Cdd:COG5022 857 AKKRFSLLkkeTIYLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLSSDLIENLEFKTELIARLKKL 936
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 499 LESSKHIDDVDTSLSLLQEISSLQEKMAAAgKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMG---KENESLKTKL 575
Cdd:COG5022 937 LNNIDLEEGPSIEYVKLPELNKLHEVESKL-KETSEEYEDLLKKSTILVREGNKANSELKNFKKELAelsKQYGALQEST 1015
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 576 DHANKENSDVIELwksKLESAIASHQQAMEELKVSFNKGVGAQTAEFAELKTQMEKVKLDYENEMSNLKLKQENEKSQHL 655
Cdd:COG5022 1016 KQLKELPVEVAEL---QSASKIISSESTELSILKPLQKLKGLLLLENNQLQARYKALKLRRENSLLDDKQLYQLESTENL 1092
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 656 keIEALKAKLLEVTEEKEQTLENL--KAKLESVEDQHLVEMEDTLN-KLQEAEIKVKELDVLQ--AKCNEQTKLIGSLTQ 730
Cdd:COG5022 1093 --LKTINVKDLEVTNRNLVKPANVlqFIVAQMIKLNLLQEISKFLSqLVNTLEPVFQKLSVLQleLDGLFWEANLEALPS 1170
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 731 QIR---ASEEKLLDLAALQKANSEGKLEIQKLSEQLQAAEKQIQNLETEKVG---GSSKVSNLT---KELQG-------- 793
Cdd:COG5022 1171 PPPfaaLSEKRLYQSALYDEKSKLSSSEVNDLKNELIALFSKIFSGWPRGDKlkkLISEGWVPTeysTSLKGfnnlnkkf 1250
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 794 KEQKLLDLEKNLSAVNQVKDSLEKElQLLKEKFTSAVDG--AENAQRAMQETINKLNqkeeqfALMSSELEQLKSNLTVM 871
Cdd:COG5022 1251 DTPASMSNEKLLSLLNSIDNLLSSY-KLEEEVLPATINSllQYINVGLFNALRTKAS------SLRWKSATEVNYNSEEL 1323
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 872 ETKLKERE------EREQQLTEAKV--KLENDIAEImkssgdssaqlmkmnDELRLKERQLEQIQLELTKANEKAVQLQK 943
Cdd:COG5022 1324 DDWCREFEisdvdeELEELIQAVKVlqLLKDDLNKL---------------DELLDACYSLNPAEIQNLKSRYDPADKEN 1388
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 971420638 944 NVEQTAQKA------EQSQQETLKTHQeELKKMQDQLTDMKKQMETSQNQY 988
Cdd:COG5022 1389 NLPKEILKKiealliKQELQLSLEGKD-ETEVHLSEIFSEEKSLISLDRNS 1438
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
857-1051 |
8.47e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 39.52 E-value: 8.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 857 MSSELEQLKsNLTVMETKLKEREEREQQLTEAKVKLENDIAEImkssgdsSAQLMKMNDELRLKERQLEQIQLELTKANE 936
Cdd:COG1579 2 MPEDLRALL-DLQELDSELDRLEHRLKELPAELAELEDELAAL-------EARLEAAKTELEDLEKEIKRLELEIEEVEA 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 937 KAVQLQKnveqtaqkaeqsQQETLKThQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEmITKHDADIKGFKQN 1016
Cdd:COG1579 74 RIKKYEE------------QLGNVRN-NKEYEALQKEIESLKRRISDLEDEILELMERIEELEEE-LAELEAELAELEAE 139
|
170 180 190
....*....|....*....|....*....|....*
gi 971420638 1017 LLDAEEALKAAQKkndELETQAEELKKQAEQAKAD 1051
Cdd:COG1579 140 LEEKKAELDEELA---ELEAELEELEAEREELAAK 171
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
841-1133 |
9.18e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.49 E-value: 9.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 841 QETINKlNQKEEQFALMSSE-LEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRL 919
Cdd:pfam17380 281 QKAVSE-RQQQEKFEKMEQErLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMERERELERIRQEERK 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 920 KE----------------RQLEQIQLELTKANEK------AVQLQKNVEQTAQKAEQSQQ---ETLKTHQEELKKMQDQL 974
Cdd:pfam17380 360 RElerirqeeiameisrmRELERLQMERQQKNERvrqeleAARKVKILEEERQRKIQQQKvemEQIRAEQEEARQREVRR 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 975 TDMKKQMETSQNQYKDLQakyEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRa 1054
Cdd:pfam17380 440 LEEERAREMERVRLEEQE---RQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKR- 515
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971420638 1055 eevlQTMEKVTKEK-DAIHQEKIETLAslENSRQTNEKLQNELDMLKQNNLKNEEE-----LTKSKELLNlENKKVEELK 1128
Cdd:pfam17380 516 ----KLLEKEMEERqKAIYEEERRREA--EEERRKQQEMEERRRIQEQMRKATEERsrleaMEREREMMR-QIVESEKAR 588
|
....*
gi 971420638 1129 KEFEA 1133
Cdd:pfam17380 589 AEYEA 593
|
|
| |
