NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|2024404163|ref|XP_015132177|]
View 

mastermind-like protein 3 isoform X1 [Gallus gallus]

Protein Classification

MamL-1 domain-containing protein( domain architecture ID 10560254)

MamL-1 domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
MamL-1 pfam09596
MamL-1 domain; The MamL-1 domain is a polypeptide of up to 70 residues, numbers 15-67 of which ...
 36-93 2.26e-23

MamL-1 domain; The MamL-1 domain is a polypeptide of up to 70 residues, numbers 15-67 of which adopt an elongated kinked helix that wraps around ANK and CSL forming one of the complexes in the build-up of the Notch transcriptional complex for recruiting general transcription factors..


:

Pssm-ID: 462834  Cd Length: 58  Bit Score: 93.91  E-value: 2.26e-23
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 2024404163   36 PKHSTVVERLRQRIEGCRRHHVSCESRYQQAQAEQLELERRDTVSLYQRTLEQRAKKT 93
Cdd:pfam09596    1 PKHQAVVDRLRRRIELYRRHHNDCESRYDNTQAERCEQERQETLMLHQRVLDSKAKRT 58
 
Name Accession Description Interval E-value
MamL-1 pfam09596
MamL-1 domain; The MamL-1 domain is a polypeptide of up to 70 residues, numbers 15-67 of which ...
 36-93 2.26e-23

MamL-1 domain; The MamL-1 domain is a polypeptide of up to 70 residues, numbers 15-67 of which adopt an elongated kinked helix that wraps around ANK and CSL forming one of the complexes in the build-up of the Notch transcriptional complex for recruiting general transcription factors..


Pssm-ID: 462834  Cd Length: 58  Bit Score: 93.91  E-value: 2.26e-23
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 2024404163   36 PKHSTVVERLRQRIEGCRRHHVSCESRYQQAQAEQLELERRDTVSLYQRTLEQRAKKT 93
Cdd:pfam09596    1 PKHQAVVDRLRRRIELYRRHHNDCESRYDNTQAERCEQERQETLMLHQRVLDSKAKRT 58
 
Name Accession Description Interval E-value
MamL-1 pfam09596
MamL-1 domain; The MamL-1 domain is a polypeptide of up to 70 residues, numbers 15-67 of which ...
 36-93 2.26e-23

MamL-1 domain; The MamL-1 domain is a polypeptide of up to 70 residues, numbers 15-67 of which adopt an elongated kinked helix that wraps around ANK and CSL forming one of the complexes in the build-up of the Notch transcriptional complex for recruiting general transcription factors..


Pssm-ID: 462834  Cd Length: 58  Bit Score: 93.91  E-value: 2.26e-23
                           10        20        30        40        50
                   ....*....|....*....|....*....|....*....|....*....|....*...
gi 2024404163   36 PKHSTVVERLRQRIEGCRRHHVSCESRYQQAQAEQLELERRDTVSLYQRTLEQRAKKT 93
Cdd:pfam09596    1 PKHQAVVDRLRRRIELYRRHHNDCESRYDNTQAERCEQERQETLMLHQRVLDSKAKRT 58
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH