|
Name |
Accession |
Description |
Interval |
E-value |
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
21-620 |
5.70e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 72.66 E-value: 5.70e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 21 QELQKLLidEKMRCEHHKANYQTIKAEHIRLQEEYTKSQDELKRLLVEKQTVHDKfqllLAEYREELLGKTQELEKLKmq 100
Cdd:COG1196 216 RELKEEL--KELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAE----LEELRLELEELELELEEAQ-- 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 101 vltpQKLELLKAQIQQELE--SPMAERYRKLENEMEKYRTEYNKLRYEHTFLKSEFEHQKEEHEHVLEEEKIKyEAEIAR 178
Cdd:COG1196 288 ----AEEYELLAELARLEQdiARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEA-EAELAE 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 179 LEKDKEELHNQLVSVDPTRDSKRVEVLS--REKAQLCQKLKGLEAEVAELRAERDNCGVQAENVQRVQVRQLAELQSLAR 256
Cdd:COG1196 363 AEEALLEAEAELAEAEEELEELAEELLEalRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEE 442
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 257 SLEAEKKSAEQHIGRIEEELQMCREQNFLLTSKLHKSEQEVNSLAAKVEELKQSHKLEVTNVKLEAARTKNEVERERNKI 336
Cdd:COG1196 443 ALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGL 522
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 337 QSEMDGLLSDKEVLKEAVE-----RHKVLLVEKDQELVRKVQAAKEEVFGKIAALQDEKLELESRLAHLEKVKLEQDAWR 411
Cdd:COG1196 523 AGAVAVLIGVEAAYEAALEaalaaALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVD 602
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 412 QTEKDQYEEKLRVVQLAEESSKRELQCLRLKIQQQAIQTEELEEKKRERDDLKQQIQDMQLQVASLSQSENDLLEynQKL 491
Cdd:COG1196 603 LVASDLREADARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEA--EAE 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 492 KETVERLRQECQNARTQAEKAQLETEKTLEYKRIEWLEEKHMLTQRITEKEEKYNEVKNKLCRAA---VAQKKRKTLNDN 568
Cdd:COG1196 681 LEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEellEEEALEELPEPP 760
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 971371611 569 KQRRMQEKLQLLEAKIEELEKENQvlnrqnVSYEEYARLQKRLKDLQRRHNE 620
Cdd:COG1196 761 DLEELERELERLEREIEALGPVNL------LAIEEYEELEERYDFLSEQRED 806
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
123-675 |
3.68e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 63.42 E-value: 3.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 123 AERYRKLENEMEKYRTEYNKLRYEHTFLKSEfehQKEEHEHVLEEEKIKYEAEIARLEKDKEELHNQLVSVDPTRD---- 198
Cdd:COG1196 212 AERYRELKEELKELEAELLLLKLRELEAELE---ELEAELEELEAELEELEAELAELEAELEELRLELEELELELEeaqa 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 199 -----SKRVEVLSREKAQLCQKLKGLEAEVAELRAERDNCGVQAENVQRVQVRQLAELQSLARSLEAEKKSAEQHIGRIE 273
Cdd:COG1196 289 eeyelLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 274 EELQMCREQNFLLTSKLHKSEQEVNSLAAKVEELKQSHKLEvTNVKLEAARTKNEVERERNKIQSEMDGLLSDKEVLKEA 353
Cdd:COG1196 369 EAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAE-EALLERLERLEEELEELEEALAELEEEEEEEEEALEEA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 354 VERHKVLLVEKDQELVRKVQAAKEEVFG--KIAALQDEKLELESRLAHLEKVK-----LEQDAWRQTEKDQYEEKLRVVQ 426
Cdd:COG1196 448 AEEEAELEEEEEALLELLAELLEEAALLeaALAELLEELAEAAARLLLLLEAEadyegFLEGVKAALLLAGLRGLAGAVA 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 427 LAEESSKRELQCL--RLKIQQQAIQTEELEEKKRERDDLKQQIQDMQLQVASLSQSENDLLEYNQKLKETVERLRQECQN 504
Cdd:COG1196 528 VLIGVEAAYEAALeaALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASD 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 505 ARTQAEKAQLETEKTLEykRIEWLEEKHMLTQRITEKEEKYNEVKNK----LCRAAVAQKKRKTLNDNKQRRMQEKLQLL 580
Cdd:COG1196 608 LREADARYYVLGDTLLG--RTLVAARLEAALRRAVTLAGRLREVTLEgeggSAGGSLTGGSRRELLAALLEAEAELEELA 685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 581 EAKIEELEKENQVLNRQNVSYEEYARLQKRLKDLQRRHNEFRSLILNPGIPSLNPISATSAPVPPPGPDVPFLFLQEEQH 660
Cdd:COG1196 686 ERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEEL 765
|
570
....*....|....*
gi 971371611 661 QRELSVLRKRLEDLE 675
Cdd:COG1196 766 ERELERLEREIEALG 780
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
32-692 |
7.93e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 59.30 E-value: 7.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 32 MRCEHHKANYQTIKAEHIRLQEEYTKSQDELKRLLVEKQTVHDKFQLL---LAEYREELLGKTQELEKLKMQV-LTPQKL 107
Cdd:TIGR02168 232 LRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELeeeIEELQKELYALANEISRLEQQKqILRERL 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 108 ELLKAQIQQelespMAERYRKLENEMEKYRTEYNKLRYEHTFLKSEFEHQkeehehvleeekikyEAEIARLEKDKEELH 187
Cdd:TIGR02168 312 ANLERQLEE-----LEAQLEELESKLDELAEELAELEEKLEELKEELESL---------------EAELEELEAELEELE 371
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 188 NQLVSVDPTRDSKRVEV--LSREKAQLCQKLKGLEAEVAELRAERDNC-GVQAENVQRVQVRQLAELQSLARSLEAEKKS 264
Cdd:TIGR02168 372 SRLEELEEQLETLRSKVaqLELQIASLNNEIERLEARLERLEDRRERLqQEIEELLKKLEEAELKELQAELEELEEELEE 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 265 AEQHIGRIEEELQMCREQNFLLTSKLHKSEQEVNSLAAKVEELKQshkleVTNVKLEAARTKNEVERERNKIqSEMDGLL 344
Cdd:TIGR02168 452 LQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLER-----LQENLEGFSEGVKALLKNQSGL-SGILGVL 525
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 345 SDK-------EVLKEAV--ERHKVLLVEKDQELVRKVQAAKEEVFGKIAALQDEKLELESRLAHLEKVKLEQDAWRQTEK 415
Cdd:TIGR02168 526 SELisvdegyEAAIEAAlgGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAK 605
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 416 D--QYEEKLRVV--------------QLAEESSKRELQCLRLKIQQ-------------QAIQTEELEEKKRERDDLKQQ 466
Cdd:TIGR02168 606 DlvKFDPKLRKAlsyllggvlvvddlDNALELAKKLRPGYRIVTLDgdlvrpggvitggSAKTNSSILERRREIEELEEK 685
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 467 IQDMQLQVASLSQSENDLLEYNQKLKETVERLRQECQNARTQ--AEKAQLETEKTLEYKRIEWLEEKHMLTQRITEKEEK 544
Cdd:TIGR02168 686 IEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQisALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEE 765
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 545 YNEVKNKLCRAAVAQKKRKTLNDNKQRRMQEKLQLLEAKIEELEKE--------NQVLNRQNVSYEEYARLQKRLKDLQR 616
Cdd:TIGR02168 766 LEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAEltllneeaANLRERLESLERRIAATERRLEDLEE 845
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 971371611 617 RHNEFRSLI--LNPGIPSLN-PISATSAPVPPPGPDVPFLFLQEEQHQRELSVLRKRLEDLETTQRKQLQELGPAGERL 692
Cdd:TIGR02168 846 QIEELSEDIesLAAEIEELEeLIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKL 924
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
255-585 |
2.11e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 54.68 E-value: 2.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 255 ARSLEAEKK--SAEQHIGRIEEELQMCREQnfllTSKLHKSEQEVNSLAAKVEELKQSHKLEVTNVKLEAARTKNEVERE 332
Cdd:TIGR02168 172 ERRKETERKleRTRENLDRLEDILNELERQ----LKSLERQAEKAERYKELKAELRELELALLVLRLEELREELEELQEE 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 333 RNKIQSEMDGLLSDKEVLKEAVERHKVLLVEKDQELvRKVQAAKEEVFGKIAALQDEKLELESRLAHLEKVKLEQDAWRQ 412
Cdd:TIGR02168 248 LKEAEEELEELTAELQELEEKLEELRLEVSELEEEI-EELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLE 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 413 TEKDQYEE-KLRVVQLAEESSKRELQCLRLKIQQQAIQTEELEEKKRERD-------------DLKQQIQDMQLQVASLS 478
Cdd:TIGR02168 327 ELESKLDElAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEEleeqletlrskvaQLELQIASLNNEIERLE 406
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 479 QSENDLLEYNQKLKETVERLRQECQNARTQAEKAQLETEKTLEYKRIEWLE----EKHMLTQRITEKEEKYNEVKNKLCR 554
Cdd:TIGR02168 407 ARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELErleeALEELREELEEAEQALDAAERELAQ 486
|
330 340 350
....*....|....*....|....*....|.
gi 971371611 555 AAVAQKKRKTLNDNKQRRMQEKLQLLEAKIE 585
Cdd:TIGR02168 487 LQARLDSLERLQENLEGFSEGVKALLKNQSG 517
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
30-614 |
2.67e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 54.38 E-value: 2.67e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 30 EKMRCEHHKANYQTIKAEHIRLQEEYTKSQ-----DELKRLLVEKQTVHDKFQLLLAEYREELLGKTQELEKlkmqvltp 104
Cdd:PTZ00121 1258 EEARMAHFARRQAAIKAEEARKADELKKAEekkkaDEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKK-------- 1329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 105 qKLELLKAQIQqelESPMAERYRKLENEMEKYRTEYNKLRYEHTFLKSEFEHQKEEHEHVLEEEKIKYEaeiaRLEKDKE 184
Cdd:PTZ00121 1330 -KADAAKKKAE---EAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKAD----EAKKKAE 1401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 185 ELHNQLVSVDPTRDSKRVEVLSREKAQLCQKLKGLEAEVAELRaERDNCGVQAENVQRVQvrQLAELQSLARSLEAEKKS 264
Cdd:PTZ00121 1402 EDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAK-KADEAKKKAEEAKKAE--EAKKKAEEAKKADEAKKK 1478
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 265 AEQhiGRIEEELQMCREQNFLLTSKLHKSEQEVNSL--AAKVEELKQSHKLEvtnvKLEAARTKNEVERERNKIQSEMdg 342
Cdd:PTZ00121 1479 AEE--AKKADEAKKKAEEAKKKADEAKKAAEAKKKAdeAKKAEEAKKADEAK----KAEEAKKADEAKKAEEKKKADE-- 1550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 343 lLSDKEVLKEAVERHKVLLVEKDQELvRKVQAAKEEVFGKIaalQDEKLELESRLAHLEKVKLEQDAWRQTEKDQYEEKL 422
Cdd:PTZ00121 1551 -LKKAEELKKAEEKKKAEEAKKAEED-KNMALRKAEEAKKA---EEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEEL 1625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 423 RvvqlAEESSKRELQCLRLKIQQQaiqteeleekKRERDDLKQQIQDMQLQVASLSQSEndlleynQKLKETVERLRQEC 502
Cdd:PTZ00121 1626 K----KAEEEKKKVEQLKKKEAEE----------KKKAEELKKAEEENKIKAAEEAKKA-------EEDKKKAEEAKKAE 1684
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 503 QNARTQAEKAQLETEKTLEYKRIEWLEEKHMLTQRITEKEEKYNEVKNKLCRAAVAQKKRKT----LNDNKQRRMQEKLQ 578
Cdd:PTZ00121 1685 EDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAeeakKDEEEKKKIAHLKK 1764
|
570 580 590
....*....|....*....|....*....|....*....
gi 971371611 579 LLEAKIEELEKENQVLNRQNVSYEEYAR---LQKRLKDL 614
Cdd:PTZ00121 1765 EEEKKAEEIRKEKEAVIEEELDEEDEKRrmeVDKKIKDI 1803
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
171-531 |
1.50e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.99 E-value: 1.50e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 171 KYEAEIARLEKDKEELHNQLVSVdptrdSKRVEVLSREKAQLCQKLKGLEAEVAELRAERDNCGVQAENVQRVQVRQLAE 250
Cdd:TIGR02169 671 SEPAELQRLRERLEGLKRELSSL-----QSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEED 745
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 251 LQSLARSLEAEKKSAEQHIGRIEEelqmcreqnflLTSKLHKSEQEVNSLAAKVEElkqshklevtnvklEAARTKNEVE 330
Cdd:TIGR02169 746 LSSLEQEIENVKSELKELEARIEE-----------LEEDLHKLEEALNDLEARLSH--------------SRIPEIQAEL 800
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 331 RERNKIQSEMDGLLSDKEVLKEAVERHKVLLVEKDQELVRKVQAAKE---EVFGKIAALQDEKLELESRLAHLEKVKLEQ 407
Cdd:TIGR02169 801 SKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEqikSIEKEIENLNGKKEELEEELEELEAALRDL 880
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 408 DAWR---QTEKDQYEEKLRVVQLAEESSKRELQCLRLKIQQQAIQTEELEEKKRERDDLKQQIQ----------DMQLQV 474
Cdd:TIGR02169 881 ESRLgdlKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEeipeeelsleDVQAEL 960
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 971371611 475 ASLSQSENDLLEYN----QKLKETVERLRQecqnarTQAEKAQLETEKTLEYKRIEWLEEK 531
Cdd:TIGR02169 961 QRVEEEIRALEPVNmlaiQEYEEVLKRLDE------LKEKRAKLEEERKAILERIEEYEKK 1015
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
54-607 |
2.71e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.12 E-value: 2.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 54 EYTKSQDELKRLLVEKQTVHDKFQLLLAEYREELLGKTQELEKLKMQVLTPQKLELLKAQIQQELESPMAERYRKLENEM 133
Cdd:TIGR00618 156 QFLKAKSKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREAL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 134 EKYRTEYNKLRYEHTFLKSEFEHQKEEHEHVLEEEKikYEAEIARLEKDKEELHNQLVSVDPTRDSKRVEVLSREKAQLC 213
Cdd:TIGR00618 236 QQTQQSHAYLTQKREAQEEQLKKQQLLKQLRARIEE--LRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIH 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 214 QKLKGLEAEVAELRAERDNCGVQAENVQRVQ------------VRQLAELQSLARSLEAEKKSAEQHIGRIEEELQMCRE 281
Cdd:TIGR00618 314 TELQSKMRSRAKLLMKRAAHVKQQSSIEEQRrllqtlhsqeihIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQ 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 282 QNFLLTSKLHKSEQEVNSLAAKVEELKqshkleVTNVKLEAARTKNEVERERNKIQSEMDGLLSDKEVLKEAVE------ 355
Cdd:TIGR00618 394 KLQSLCKELDILQREQATIDTRTSAFR------DLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLqesaqs 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 356 -RHKVLLVEKDQELVRKVQAAKEEVFGKIAALQDEKLELESRLAHLEKVKLEQDAWRQTEKDQYEEKLRVVQLAEESSKR 434
Cdd:TIGR00618 468 lKEREQQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDV 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 435 ELQCLRLKiQQQAIQTEELEEKKRERDDLKQQIQDMQLQVASLSQSENDLLEYNQKLKETVERLRQECQNARTQAEKAQL 514
Cdd:TIGR00618 548 YHQLTSER-KQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQD 626
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 515 ETEKTLEYKRIEWLEEKHMLTQRITEKEEKYNEVKNKLCRAAVAQKKRKTLNDNKQRRMQEKLQLLEAKIEELEKENQVL 594
Cdd:TIGR00618 627 LQDVRLHLQQCSQELALKLTALHALQLTLTQERVREHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLL 706
|
570
....*....|...
gi 971371611 595 NRQNVSYEEYARL 607
Cdd:TIGR00618 707 RELETHIEEYDRE 719
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
106-620 |
5.16e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 50.12 E-value: 5.16e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 106 KLELLKAQIQQELESPMAERYRKLENEMEKYRTEYNKLRYEHTFLKSE---FEHQKEEHEHVLEEEKIKYEAEIARLEKD 182
Cdd:pfam15921 246 QLEALKSESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQansIQSQLEIIQEQARNQNSMYMRQLSDLEST 325
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 183 KEELHNQLvsvdptRDSKRVevLSREKAQLCQKLKGLEAEVAELRAERDNCGVQAENVQRVQVRQLAELQSLARSLEAEK 262
Cdd:pfam15921 326 VSQLRSEL------REAKRM--YEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEK 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 263 KSAEQHIGRieeelqmcREQNFLLTSKLHKSEQEVNSLAAKVEELKQSHKLEVTNV---KLEAARTKNEverERNKIQSE 339
Cdd:pfam15921 398 EQNKRLWDR--------DTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQGQmerQMAAIQGKNE---SLEKVSSL 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 340 MDGLLSDKEVLKEAVER--HKVLLVEKDQELVRKVQAAKEEVFGKIAALQDEKLELESRL--------------AHLEKV 403
Cdd:pfam15921 467 TAQLESTKEMLRKVVEEltAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVdlklqelqhlknegDHLRNV 546
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 404 KLEQDAWR--QTEKDQYEEKLR------------------VVQLAEESSKRELQCLRLKIQQQAIqteELEEKKRERDDL 463
Cdd:pfam15921 547 QTECEALKlqMAEKDKVIEILRqqienmtqlvgqhgrtagAMQVEKAQLEKEINDRRLELQEFKI---LKDKKDAKIREL 623
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 464 KQQIQDMQLQVASLSQSENDLLEYNQKLKETVERLRQECQNARTQAEKAQLETE---KTLEYKRIEWLEEKHMLTQRITE 540
Cdd:pfam15921 624 EARVSDLELEKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEvlkRNFRNKSEEMETTTNKLKMQLKS 703
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 541 KEEKYNEVKNKL----------CRAAVAQKKRKTLNDNKQRRMQEKLQLLEAKIEELEKENQVLNrqnvsyEEYARLQKR 610
Cdd:pfam15921 704 AQSELEQTRNTLksmegsdghaMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLK------EEKNKLSQE 777
|
570
....*....|
gi 971371611 611 LKDLQRRHNE 620
Cdd:pfam15921 778 LSTVATEKNK 787
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
87-402 |
6.71e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 49.67 E-value: 6.71e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 87 LLGKTQELEKLKMQVltpQKLELLKAQIQQELESpMAERYRKLENEMEKYRTEYNKLRYEHTFLKSEF-----EHQKEEH 161
Cdd:TIGR02168 672 ILERRREIEELEEKI---EELEEKIAELEKALAE-LRKELEELEEELEQLRKELEELSRQISALRKDLarleaEVEQLEE 747
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 162 EHVLEEEKIK-YEAEIARLEKDKEELHNQLVSVDPTRDS--KRVEVLSREKAQLCQKLKGLEAEVAELRAERDNCGVQAE 238
Cdd:TIGR02168 748 RIAQLSKELTeLEAEIEELEERLEEAEEELAEAEAEIEEleAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLE 827
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 239 NVQrvqvRQLAELQSLARSLEAEKKSAEQHIGRIEEELQMCREQNFLLTSKLHKSEQEVNSLAAKVEELKQShklevtnv 318
Cdd:TIGR02168 828 SLE----RRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSE-------- 895
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 319 KLEAARTKNEVERERNKIQSEMDGLLSDKEVLKEAVERHKVLLVEKDQELVRKVQAAKEEVFGKIAALQDEKLELESRLA 398
Cdd:TIGR02168 896 LEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSLTLEEAEALENKIEDDEEEARRRLK 975
|
....
gi 971371611 399 HLEK 402
Cdd:TIGR02168 976 RLEN 979
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
119-622 |
9.28e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 49.37 E-value: 9.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 119 ESPMAERYRKLEnEMEKYRTEYNKLRYEHTFLKSEFEHQKEEHEHVLEEEKIKYEAEIARLEKDKEELHNQLVSVDPTRD 198
Cdd:PTZ00121 1222 DAKKAEAVKKAE-EAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEE 1300
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 199 SKRVEVLsREKAQLCQKLKGLEAEVAELRAERDNCGVQAENVQRVQVRQLAELQSLARSLEAEKKSAEQHIGRIEEELQM 278
Cdd:PTZ00121 1301 KKKADEA-KKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKK 1379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 279 CREqnfllTSKLHKSEQEVNSLAAKVEELKQS----HKLEVTNVKLEAARTKNEVERERNKIQSEMDGLLSDKEVLKEAV 354
Cdd:PTZ00121 1380 ADA-----AKKKAEEKKKADEAKKKAEEDKKKadelKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAE 1454
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 355 ERHKVLLVEKDQELVRKVQAAKEEVFGKIAALQDEKLELESRLAHLEKVKLEQDAWRQTEKDQYEEKLRVVQLAEESSKR 434
Cdd:PTZ00121 1455 EAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAK 1534
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 435 ELQCLRLKIQQQAIQTEELEEKKRERDDLKQQIQDMQLQVASLSQSENDLLEYNQKLKETVERLRQECQNARTQAEKAQL 514
Cdd:PTZ00121 1535 KADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKK 1614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 515 ETEKTLEYKRIEWLEEKHMLTQRITEKEEKYNEVKNKLCRAAVAQKKRKTLNDNKQRRMQEKLQLLEAKIEELEKENQVL 594
Cdd:PTZ00121 1615 AEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEAL 1694
|
490 500
....*....|....*....|....*...
gi 971371611 595 NRQNVSYEEYARLQKRLKDLQRRHNEFR 622
Cdd:PTZ00121 1695 KKEAEEAKKAEELKKKEAEEKKKAEELK 1722
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
171-587 |
2.24e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.84 E-value: 2.24e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 171 KYEAEIARLEKDKEELHNQLVSVdptRDSKRVEVLSREKAQLCQKLKGLEAEVAELRAERDNCGVQAENVQRVQVRQLAE 250
Cdd:COG4717 99 ELEEELEELEAELEELREELEKL---EKLLQLLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAEL 175
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 251 LQSLARSLEAEKKSAEQHIGRIEEELQMCREQNFLLTSKLHKSEQEVNSLAAKVEELKQSHKLEVTNVKLEAARTKNEVE 330
Cdd:COG4717 176 QEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIA 255
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 331 RERNKIQSEMDGLLSDKEVLKEAVERHKVLLVEKDQELVRKVQAAKEEVFGKIAALQDEKLELESRLAHLEKVKLEQDAW 410
Cdd:COG4717 256 AALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLS 335
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 411 RQTEKDQYE--EKLRVVQLAEESSKRELQCLRLKIQQQAIQTE----------ELEEKKRERDDLKQQIQDMQLQVASLS 478
Cdd:COG4717 336 PEELLELLDriEELQELLREAEELEEELQLEELEQEIAALLAEagvedeeelrAALEQAEEYQELKEELEELEEQLEELL 415
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 479 QSENDLLEYNQK--LKETVERLRQECQNArtQAEKAQLETEKTLEYKRIEWLEEKHMLTQRITEKEEKYNEVKNKLCRAA 556
Cdd:COG4717 416 GELEELLEALDEeeLEEELEELEEELEEL--EEELEELREELAELEAELEQLEEDGELAELLQELEELKAELRELAEEWA 493
|
410 420 430
....*....|....*....|....*....|.
gi 971371611 557 VAQKKRKTLNDNKQRRMQEKLQLLEAKIEEL 587
Cdd:COG4717 494 ALKLALELLEEAREEYREERLPPVLERASEY 524
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
367-627 |
2.29e-05 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 48.13 E-value: 2.29e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 367 ELVRKVQAAKEEVFGKIAALQDEKLELESRLAHLEKVKLEQDAWRQTEKDQYEEKLRVVQLAEESSKRELQCLRLKIQQQ 446
Cdd:TIGR02168 681 ELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELE 760
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 447 AIQTEELEEKKRERDDLKQQIQDMQLQVASLSQSENDLLEYNQKLKETVERLRQECQNARTQAEK-AQLETEKTLEYKRI 525
Cdd:TIGR02168 761 AEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERlESLERRIAATERRL 840
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 526 EWLEEKHmltQRITEKEEKYNEVKNKLCRAAVAQKKRKTLNDNKQRRMQEKLQLLEAKIEELEKENQVLNRQNV-SYEEY 604
Cdd:TIGR02168 841 EDLEEQI---EELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSeLRREL 917
|
250 260
....*....|....*....|...
gi 971371611 605 ARLQKRLKDLQRRHNEFRSLILN 627
Cdd:TIGR02168 918 EELREKLAQLELRLEGLEVRIDN 940
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
173-331 |
3.59e-05 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 47.16 E-value: 3.59e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 173 EAEIARLEKDKEELHNQLVSVDPTRDSKRVEVLSREKAQLCQKLKGLEAEVAELRAERDncgvqaenvqrvqvRQLAELQ 252
Cdd:COG2433 379 EEALEELIEKELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEELEAELE--------------EKDERIE 444
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 253 SLARSLEAEKKSAEQHIgRIEEELQMCREQNFLLTSKLHKSEQEVNSLAAKVEELKQSHKLEV----TNVKLEAARTKNE 328
Cdd:COG2433 445 RLERELSEARSEERREI-RKDREISRLDREIERLERELEEERERIEELKRKLERLKELWKLEHsgelVPVKVVEKFTKEA 523
|
...
gi 971371611 329 VER 331
Cdd:COG2433 524 IRR 526
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
17-500 |
4.35e-05 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 46.85 E-value: 4.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 17 AANSQELQKLLIDEKMRCEHHKANYQTIKAEHIRLQEEYTKSQDELKRLLVEKQTVHDKFQLLLAEYREELLGKTQELEK 96
Cdd:COG1196 315 EERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRA 394
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 97 LKMQVLTPQKLELLKAQIQQELESpMAERYRKLENEMEKYRTEYNKLRyehtflksEFEHQKEEHEHVLEEEKIKYEAEI 176
Cdd:COG1196 395 AAELAAQLEELEEAEEALLERLER-LEEELEELEEALAELEEEEEEEE--------EALEEAAEEEAELEEEEEALLELL 465
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 177 ARLEKDKEELHNQLVSVDPTRDSKRVEVLSREKAQlcQKLKGLEAEVAELRAERDNCGVQAEnvqrvqVRQLAELQSLAR 256
Cdd:COG1196 466 AELLEEAALLEAALAELLEELAEAAARLLLLLEAE--ADYEGFLEGVKAALLLAGLRGLAGA------VAVLIGVEAAYE 537
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 257 SLEAEKKSAEQHIGRIEEELQMCREQNFLLTSKLHKSEQEVnslAAKVEELKQSHKLEVTNVKLEAARTKNEVERERNKI 336
Cdd:COG1196 538 AALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLP---LDKIRARAALAAALARGAIGAAVDLVASDLREADAR 614
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 337 QSEMDGLLSDKEVLKEAVERHKVLLVEKDQELVRKVQAAKEEVFGKIAALQDEKLELESRLAHLEKVKLEQDAWRQTEKD 416
Cdd:COG1196 615 YYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELE 694
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 417 QYEEKLRVVQLAEESSKRELQCLRLKIQQQAIQTEELEEKKRERDDLKQQIQDMQLQVASLSQSENDLLEYNQKLKETVE 496
Cdd:COG1196 695 LEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLER 774
|
....
gi 971371611 497 RLRQ 500
Cdd:COG1196 775 EIEA 778
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
50-354 |
4.91e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.98 E-value: 4.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 50 RLQEEYTKSQdELKRLLVEKQTVhdKFQLLLAEYRE----------ELLGKTQELEKLKMQVltpQKLELLKAQIQQELE 119
Cdd:TIGR02169 202 RLRREREKAE-RYQALLKEKREY--EGYELLKEKEAlerqkeaierQLASLEEELEKLTEEI---SELEKRLEEIEQLLE 275
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 120 SPMAERYRKLENEMEKYRTEYNKLRYEHTFLKSEFEHQKEEHEHVLEEEKiKYEAEIARLEKDKEELHNQLVSVDPTRDS 199
Cdd:TIGR02169 276 ELNKKIKDLGEEEQLRVKEKIGELEAEIASLERSIAEKERELEDAEERLA-KLEAEIDKLLAEIEELEREIEEERKRRDK 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 200 KRVEVLSREK--AQLCQKLKGLEAEVAELRAERDNCGVQAENVQRVQ---VRQLAELQSLARSLEAEKKSAEQHIGRIEE 274
Cdd:TIGR02169 355 LTEEYAELKEelEDLRAELEEVDKEFAETRDELKDYREKLEKLKREInelKRELDRLQEELQRLSEELADLNAAIAGIEA 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 275 ELQMCREQNFLLTSKLHKSEQEVNSLAAKVEELKQshklevtnvKLEAARTK-NEVERERNKIQSEMDGLLSDKEVLKEA 353
Cdd:TIGR02169 435 KINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQ---------ELYDLKEEyDRVEKELSKLQRELAEAEAQARASEER 505
|
.
gi 971371611 354 V 354
Cdd:TIGR02169 506 V 506
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
102-434 |
5.63e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 46.60 E-value: 5.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 102 LTPQKLELLKAQIQQELESpMAERYRKLENEMEKYRTEYNKLRYEHTFLKSEFEHQKEEHEHVLEEEKIkYEAEIARLEK 181
Cdd:TIGR02169 660 RAPRGGILFSRSEPAELQR-LRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQ-LEQEEEKLKE 737
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 182 DKEELHNQLVSVDPTRDSKRVEV--LSREKAQLCQKLKGLEAEVAELRAERDNCGVQAENVQRVQVR-QLAELQSLARSL 258
Cdd:TIGR02169 738 RLEELEEDLSSLEQEIENVKSELkeLEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEeEVSRIEARLREI 817
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 259 EAEKKSAEQHIGRIEEELQMCREQNFLLTSKLHKSEQEVNSLAAKVEELKQSHKlevtnvklEAARTKNEVERERNKIQS 338
Cdd:TIGR02169 818 EQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELE--------ELEAALRDLESRLGDLKK 889
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 339 EMDGLLSDKEVLKEAVERHKvLLVEKDQELVRKVQAAKEEVFGKIAALQDEKLELES---RLAHLEKVKLEQDAWRQTEK 415
Cdd:TIGR02169 890 ERDELEAQLRELERKIEELE-AQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEipeEELSLEDVQAELQRVEEEIR 968
|
330
....*....|....*....
gi 971371611 416 DQYEEKLRVVQLAEESSKR 434
Cdd:TIGR02169 969 ALEPVNMLAIQEYEEVLKR 987
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
107-624 |
1.28e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 45.42 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 107 LELLKAQIQQELESPMAERYRKLENEMEKYRTEYNklRYEHtflKSEFEHQKEEHEHVLEEEKIKYEAEIARLEKDKEEL 186
Cdd:PRK02224 189 LDQLKAQIEEKEEKDLHERLNGLESELAELDEEIE--RYEE---QREQARETRDEADEVLEEHEERREELETLEAEIEDL 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 187 HNQLVSVDPTRDSkrvevLSREKAQLCQKLKGLEAEVAELRAERDNCGVQAENVQRVQVRQLAELQSLARSLEAEKKSAE 266
Cdd:PRK02224 264 RETIAETEREREE-----LAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQ 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 267 QH----------IGRIEEELQMCREQNFLLTSKLHKSEQEVNSLAAKVEELKQ-----SHKLEVTNVKLEAARTKNE-VE 330
Cdd:PRK02224 339 AHneeaeslredADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEeieelRERFGDAPVDLGNAEDFLEeLR 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 331 RERNKIQSEMDGLLSDKEVLKEAVERHKVLLVE----------KDQELVRKV---QAAKEEVFGKIAALQDEKLELESRL 397
Cdd:PRK02224 419 EERDELREREAELEATLRTARERVEEAEALLEAgkcpecgqpvEGSPHVETIeedRERVEELEAELEDLEEEVEEVEERL 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 398 AHLEK-VKLEQDAWRQTEKDQYEEKlRVVQLAEESSKRELQCLRLKIQQQAIQTeELEEKKRERDDLKQQIQDMQLQVAS 476
Cdd:PRK02224 499 ERAEDlVEAEDRIERLEERREDLEE-LIAERRETIEEKRERAEELRERAAELEA-EAEEKREAAAEAEEEAEEAREEVAE 576
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 477 LSQSENDLLEYNQKLkETVERLRQECQNARTQAE--KAQLETEKTLEYKRIEWLEEKHmltQRITEKEEKYNEVknklcR 554
Cdd:PRK02224 577 LNSKLAELKERIESL-ERIRTLLAAIADAEDEIErlREKREALAELNDERRERLAEKR---ERKRELEAEFDEA-----R 647
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 555 AAVAQKKRKTLnDNKQRRMQEKLQLLEAKIEELEKENQVLNRqnvSYEEYARLQKRLKDLQRRHNEFRSL 624
Cdd:PRK02224 648 IEEAREDKERA-EEYLEQVEEKLDELREERDDLQAEIGAVEN---ELEELEELRERREALENRVEALEAL 713
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
112-520 |
1.56e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.21 E-value: 1.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 112 AQIQQELESPMAERYRKLENEMEKYRTEYNKLRYEHTFLKSEFEHQKEEHEHVLEEEKIKYEAEIArlekDKEELHNQLV 191
Cdd:pfam12128 393 AGIKDKLAKIREARDRQLAVAEDDLQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATA----TPELLLQLEN 468
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 192 SVDptrdskRVEVLSREKAQLCQKLKGLEAEVAELRAERDNCGV--QAENVQRVQVRQ-LAELQ--------SLARSLEA 260
Cdd:pfam12128 469 FDE------RIERAREEQEAANAEVERLQSELRQARKRRDQASEalRQASRRLEERQSaLDELElqlfpqagTLLHFLRK 542
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 261 EKKSAEQHIGRIEEELQMCR-------------EQNFLLTSKLHKSEQEVNSLAAKVEELKQshKLEVTNVKLEAARTKN 327
Cdd:pfam12128 543 EAPDWEQSIGKVISPELLHRtdldpevwdgsvgGELNLYGVKLDLKRIDVPEWAASEEELRE--RLDKAEEALQSAREKQ 620
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 328 EVERE-----RNKIQSEMDGLLSDKEVLKEAVERHKVLLVEKDQELVRKVQAAKEEVFGKIAALQDEKLELESRLAHLEK 402
Cdd:pfam12128 621 AAAEEqlvqaNGELEKASREETFARTALKNARLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQA 700
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 403 VKLEQDAWRQTEKDQYEEKLRVV------QLAEESSKRELQCLRLKIQQQAIQTEELEEKKRERDD------LKQQIQDM 470
Cdd:pfam12128 701 WLEEQKEQKREARTEKQAYWQVVegaldaQLALLKAAIAARRSGAKAELKALETWYKRDLASLGVDpdviakLKREIRTL 780
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|
gi 971371611 471 QLQVASLSQSENDLLEYNQKLKETVERLRQECQNARTQAEKAQLETEKTL 520
Cdd:pfam12128 781 ERKIERIAVRRQEVLRYFDWYQETWLQRRPRLATQLSNIERAISELQQQL 830
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
82-618 |
1.83e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.05 E-value: 1.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 82 EYREELLGKTQELEKLKmqvltpQKLELLKAQIQQELESPMAERyRKLENEMEKYRTEYNKLRYehtfLKSEFEhQKEEH 161
Cdd:PRK03918 179 ERLEKFIKRTENIEELI------KEKEKELEEVLREINEISSEL-PELREELEKLEKEVKELEE----LKEEIE-ELEKE 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 162 EHVLEEEKIKYEAEIARLEKDKEELhnqlvsvdptrdSKRVEVLsREKAQLCQKLKGLEAEVAELRAERDNCGVQAENVQ 241
Cdd:PRK03918 247 LESLEGSKRKLEEKIRELEERIEEL------------KKEIEEL-EEKVKELKELKEKAEEYIKLSEFYEEYLDELREIE 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 242 RVQVRQLAELQSLARSLEaEKKSAEQHIGRIEEELQMCREQNFLLTSKlHKSEQEVNSLAAKVEELKQSHKL----EVTN 317
Cdd:PRK03918 314 KRLSRLEEEINGIEERIK-ELEEKEERLEELKKKLKELEKRLEELEER-HELYEEAKAKKEELERLKKRLTGltpeKLEK 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 318 VKLEAARTKNEVERERNKIQSEMDGLLSDKEVLKEAVERHK-----------VLLVEKDQELVRKVQAAKEEVFGKIAAL 386
Cdd:PRK03918 392 ELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKkakgkcpvcgrELTEEHRKELLEEYTAELKRIEKELKEI 471
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 387 QDEKLELESRLAHLEKVKLEQdawrqtekdqyEEKLRVVQLAEesskrelQCLRLKIQQQAIQTEELEEKKRERDDLKQQ 466
Cdd:PRK03918 472 EEKERKLRKELRELEKVLKKE-----------SELIKLKELAE-------QLKELEEKLKKYNLEELEKKAEEYEKLKEK 533
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 467 IQDMQLQVASLSQSENDLLEYNQKLKETVERLRqecqnartQAEKAQLETEKTLEYKRIEWLEEKHMLTQRITEKEEKYN 546
Cdd:PRK03918 534 LIKLKGEIKSLKKELEKLEELKKKLAELEKKLD--------ELEEELAELLKELEELGFESVEELEERLKELEPFYNEYL 605
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 971371611 547 EVKNKLCRAAVAQKKRKTLnDNKQRRMQEKLQLLEAKIEELEKENQVLNRqNVSYEEYARLQKRLKDLQRRH 618
Cdd:PRK03918 606 ELKDAEKELEREEKELKKL-EEELDKAFEELAETEKRLEELRKELEELEK-KYSEEEYEELREEYLELSREL 675
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
126-589 |
4.24e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 43.81 E-value: 4.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 126 YRKLENEMEKYRTEYNKLRYEHTFLKSEFEHQKEEHEHVLEEEKIKYEAEIARLEKDKEELHNQLVSVDPTRDSKRVEVL 205
Cdd:pfam02463 563 RQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAK 642
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 206 SREkAQLCQKLKGLEAEVAELRAERDNCGVQAENVQRVQVRQLAELQSLARSLEAEKKSAEQHIGRIEEELQMCREQNFL 285
Cdd:pfam02463 643 AKE-SGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEE 721
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 286 LTSKLHKSEQEVNSLAAKVEELKQSHKLEVTNVKLEAARTKNEVERERNKIQSEMDGLLSDKEVLKEAVERHKVLLVEKD 365
Cdd:pfam02463 722 LLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEE 801
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 366 QELVRKVQAAKEEVFGKIAALQDEKLELESRLAHLEKVKLEQDAWRQTEKDQYEEKLRVVQLAEESSKRELQCLRLKIQQ 445
Cdd:pfam02463 802 ELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEE 881
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 446 QAIQTEELEEKKRERDDLKQQIQdmqlqvasLSQSENDLLEYNQKLKETVERLRQECQNARTQAEKAQLETEKTLEYKRI 525
Cdd:pfam02463 882 QKLKDELESKEEKEKEEKKELEE--------ESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEEN 953
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 971371611 526 EWLEEKHMLTQRITEKEEKYNEVKNKLCRAAVAQKKRKTLNDNKQRRMQEKLQLLEAKIEELEK 589
Cdd:pfam02463 954 NKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQ 1017
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
47-596 |
5.26e-04 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 43.57 E-value: 5.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 47 EHI-RLQEEYTKSQDELKRLLVEKQTVHDKFQLLLAEYREELLGKTQELEKLK-----MQVLTPQKLELLKAQIQQELES 120
Cdd:pfam15921 74 EHIeRVLEEYSHQVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERdamadIRRRESQSQEDLRNQLQNTVHE 153
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 121 PMAERYRKlENEMEKYRTEYNKLRyehtflKSEFEHQKEEHEHVLEEekIKYEAEIARLEKDKEELHNQLVSVDPTRDSK 200
Cdd:pfam15921 154 LEAAKCLK-EDMLEDSNTQIEQLR------KMMLSHEGVLQEIRSIL--VDFEEASGKKIYEHDSMSTMHFRSLGSAISK 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 201 RVEVLSREKAQLCQKLKGLEAEVAELRAERDNCGVQAENVQRVQVRQL-AELQSLARSLEAEKKSAEQHIGRIEEELQM- 278
Cdd:pfam15921 225 ILRELDTEISYLKGRIFPVEDQLEALKSESQNKIELLLQQHQDRIEQLiSEHEVEITGLTEKASSARSQANSIQSQLEIi 304
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 279 ---CREQNFLLTSKLHKSEQEVNSLAAKVEELKQSH---------KLEVTNVKLEAART-KNEVERERNKIQSEMDGLLS 345
Cdd:pfam15921 305 qeqARNQNSMYMRQLSDLESTVSQLRSELREAKRMYedkieelekQLVLANSELTEARTeRDQFSQESGNLDDQLQKLLA 384
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 346 DKEvlkeavERHKVLLVEKDQ----------------ELVRKVQAAKEEVFGKIAALQDEKLELESRLAH---------- 399
Cdd:pfam15921 385 DLH------KREKELSLEKEQnkrlwdrdtgnsitidHLRRELDDRNMEVQRLEALLKAMKSECQGQMERqmaaiqgkne 458
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 400 -LEKVKLEQDAWRQTEK--DQYEEKLRVVQLAEESSKRELQCLRLKIQQQ--AIQ-TEELEEKKRERDDLK-QQIQDMQL 472
Cdd:pfam15921 459 sLEKVSSLTAQLESTKEmlRKVVEELTAKKMTLESSERTVSDLTASLQEKerAIEaTNAEITKLRSRVDLKlQELQHLKN 538
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 473 QVASL--SQSENDLLEYNQKLKETV-ERLRQECQN--------ART----QAEKAQLETE---KTLEYKRIEWLEEKHml 534
Cdd:pfam15921 539 EGDHLrnVQTECEALKLQMAEKDKViEILRQQIENmtqlvgqhGRTagamQVEKAQLEKEindRRLELQEFKILKDKK-- 616
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 971371611 535 TQRITEKEEKYNEVKNKLCRAAVAQKKR-KTLNDNKQRRMQ--EKLQLLEAKIEELEKENQVLNR 596
Cdd:pfam15921 617 DAKIRELEARVSDLELEKVKLVNAGSERlRAVKDIKQERDQllNEVKTSRNELNSLSEDYEVLKR 681
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
382-625 |
7.75e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.98 E-value: 7.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 382 KIAALQDEKLELESRLAHLEKVKLEQDAWRQTEKDQYEEKLRVVQLAEESskRELQCLRLKIQQQAIQTEELEEKKRERD 461
Cdd:COG4913 611 KLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDE--IDVASAEREIAELEAELERLDASSDDLA 688
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 462 DLKQQIQDMQLQVASLSQSENDLLEYNQKLKETVERLRQECQNARTQAEKAQLETEKTLEYKRIEWLEEkhmltqriTEK 541
Cdd:COG4913 689 ALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAA--------ALG 760
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 542 EEKYNEVKNKLcraavaQKKRKTLNDNKQRRMQEKLQLLEAKIEELEKENQVLNRQNVSYEEYARLQKRLK--DLQRRHN 619
Cdd:COG4913 761 DAVERELRENL------EERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRLEedGLPEYEE 834
|
....*.
gi 971371611 620 EFRSLI 625
Cdd:COG4913 835 RFKELL 840
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
246-445 |
7.81e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.44 E-value: 7.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 246 RQLAELQSLARSLEAEKKSAEQHIGRIEEELQMCREQNFLLTSKLHKSEQEVNSLAAKVEEL-KQSHKLEVTNVKLEAAR 324
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELeKEIAELRAELEAQKEEL 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 325 TKNEVERERNKIQSEMDGLLSDKEVLkEAVERHKVL--LVEKDQELVRKVQAAKEEVFGKIAALQDEKLELESRLAHLEK 402
Cdd:COG4942 107 AELLRALYRLGRQPPLALLLSPEDFL-DAVRRLQYLkyLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEE 185
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 971371611 403 VKLEQdawrQTEKDQYEEKLRVVQLAEESSKRELQCLRLKIQQ 445
Cdd:COG4942 186 ERAAL----EALKAERQKLLARLEKELAELAAELAELQQEAEE 224
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
16-494 |
8.83e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.82 E-value: 8.83e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 16 DAANSQELQKLLIDEKMRCEHHKANYQTIKAEHIRLQEEYTKSQDELKRLLVE-KQTVHDKFQLLLAEYREELLGKTQEL 94
Cdd:PTZ00121 1357 DEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADElKKAAAAKKKADEAKKKAEEKKKADEA 1436
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 95 EKlkmQVLTPQKLELLKAQiqqelespmAERYRKLENEM----EKYRTEYNKLRYEHTFLKSEFEHQKEEHEHVLEEEKI 170
Cdd:PTZ00121 1437 KK---KAEEAKKADEAKKK---------AEEAKKAEEAKkkaeEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKK 1504
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 171 KYEAEIARLEKDKEELHNQLVSVDPTRDSKRVEVLsrEKAQLCQKLKGLEAEVAELRAERDNcgvQAENVQRVQVRQLAE 250
Cdd:PTZ00121 1505 AAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEA--KKAEEKKKADELKKAEELKKAEEKK---KAEEAKKAEEDKNMA 1579
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 251 LQSLARSLEAEKKSAEQHIGRIEEELQMCREQNFLLTSKLHKSEQ--EVNSLAAKVEELKQSHKLEVTNV-KLEAARTKN 327
Cdd:PTZ00121 1580 LRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEElkKAEEEKKKVEQLKKKEAEEKKKAeELKKAEEEN 1659
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 328 EVERERNKIQSEMDGLLSDKEVLKEAVERHKVLLVEKDQELVRKVQAAKEEVFGKIAALQDEKLELESRLAHLEKVKLEQ 407
Cdd:PTZ00121 1660 KIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEA 1739
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 408 DAWRQTE---KDQYEEKLRVVQLAEESSKRELQCLRLKiqQQAIQTEELEEKKRERDDLKQQIQDMQLQVASLSQSENDL 484
Cdd:PTZ00121 1740 EEDKKKAeeaKKDEEEKKKIAHLKKEEEKKAEEIRKEK--EAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEG 1817
|
490
....*....|
gi 971371611 485 LEYNQKLKET 494
Cdd:PTZ00121 1818 NLVINDSKEM 1827
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
200-343 |
3.13e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.05 E-value: 3.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 200 KRVEVLSREKAQLCQKLKGLEAEVAELRAERDNCGVQaenVQRVQVRQLAELQSLARSLEAEKKSAEQHIGRIEEELQMC 279
Cdd:COG4913 295 AELEELRAELARLEAELERLEARLDALREELDELEAQ---IRGNGGDRLEQLEREIERLERELEERERRRARLEALLAAL 371
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 971371611 280 REQNFLLTSKLHKSEQEVNSLAAKVEELKQSHKLEVTnvklEAARTKNEVERERNKIQSEMDGL 343
Cdd:COG4913 372 GLPLPASAEEFAALRAEAAALLEALEEELEALEEALA----EAEAALRDLRRELRELEAEIASL 431
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
173-356 |
3.29e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.05 E-value: 3.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 173 EAEIARLEKDKEELHNQLVSVDPTRD--SKRVEVLSR--EKAQLCQKLKGLEAEVAELRAERDNCGVQAENVQRVQvRQL 248
Cdd:COG4913 616 EAELAELEEELAEAEERLEALEAELDalQERREALQRlaEYSWDEIDVASAEREIAELEAELERLDASSDDLAALE-EQL 694
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 249 AELQSLARSLEAEKKSAEQHIGRIEEELQMCREQnflltsklhksEQEVNSLAAKVEELKQSHKLEVTNVKLEAARTKNE 328
Cdd:COG4913 695 EELEAELEELEEELDELKGEIGRLEKELEQAEEE-----------LDELQDRLEAAEDLARLELRALLEERFAAALGDAV 763
|
170 180
....*....|....*....|....*...
gi 971371611 329 VERERNKIQSEMDGLLSDKEVLKEAVER 356
Cdd:COG4913 764 ERELRENLEERIDALRARLNRAEEELER 791
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
252-514 |
4.53e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.13 E-value: 4.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 252 QSLARSLEAEKKSAEQHIGRIEEELQMCREQNFLLTSKLHKSEQEVNSLAAKVEELkqshklevtnvkleaartknevER 331
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRAL----------------------EQ 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 332 ERNKIQSEMDGLLSDKEVLKEAVERHKVLLvekdQELVRKVQAAKEEVFGKIAALQDEKLELESRLAHLEKVKLEQDAWR 411
Cdd:COG4942 77 ELAALEAELAELEKEIAELRAELEAQKEEL----AELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQA 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 412 QTEKDQYEEKLRVVQLAEESSKRELQCLRLKIQQQAIQTEELEEKKRERDDLKQQIQDMQLQVASLSQSENDLLEYNQKL 491
Cdd:COG4942 153 EELRADLAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARL 232
|
250 260
....*....|....*....|...
gi 971371611 492 KETVERLRQECQNARTQAEKAQL 514
Cdd:COG4942 233 EAEAAAAAERTPAAGFAALKGKL 255
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
16-341 |
4.77e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.51 E-value: 4.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 16 DAANSQELQKllIDEKMRCEHHKANYQTIKAEHIRLQEEYTKSQDE----LKRLLVEKQTVHDKFQLLLAEYREELLGKT 91
Cdd:PTZ00121 1532 EAKKADEAKK--AEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDknmaLRKAEEAKKAEEARIEEVMKLYEEEKKMKA 1609
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 92 QELEKLKMQVLTPQKLELLKAQIQQELESPMAERYRKLENEMEKYRTEYNKLRYEHTFLKSEFEHQKEEHEHVLEEEKIK 171
Cdd:PTZ00121 1610 EEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKK 1689
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 172 YEAEIARLEKDKEElhnqlvsVDPTRDSKRVEVLSREKAQLCQKLKGLEAEVAELRAERDNCGVQAENVQRVQVRQLAEL 251
Cdd:PTZ00121 1690 AAEALKKEAEEAKK-------AEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHL 1762
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 252 QSLARSLEAEKKSAEQHIgrIEEELqmcREQNFLLTSKLHKSEQEVNSLAAKVEELKQSHKLEVTNVKLEAARTKNEVER 331
Cdd:PTZ00121 1763 KKEEEKKAEEIRKEKEAV--IEEEL---DEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVAD 1837
|
330
....*....|
gi 971371611 332 ERNKIQSEMD 341
Cdd:PTZ00121 1838 SKNMQLEEAD 1847
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
300-479 |
5.17e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.28 E-value: 5.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 300 LAAKVEELKQSHKLEVTNVKLEAARTKNEVERERNKIQSEMDGLLSDKEVLKEAVERHKVLLVEKDQELvRKVQAAKEEV 379
Cdd:COG4913 257 IRELAERYAAARERLAELEYLRAALRLWFAQRRLELLEAELEELRAELARLEAELERLEARLDALREEL-DELEAQIRGN 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 380 FGkiaalqDEKLELESRLAHLEKvKLEQdawRQTEKDQYEEKLRVVQLAEESSKRELQCLRLKIQQQAIQ-TEELEEKKR 458
Cdd:COG4913 336 GG------DRLEQLEREIERLER-ELEE---RERRRARLEALLAALGLPLPASAEEFAALRAEAAALLEAlEEELEALEE 405
|
170 180
....*....|....*....|.
gi 971371611 459 ERDDLKQQIQDMQLQVASLSQ 479
Cdd:COG4913 406 ALAEAEAALRDLRRELRELEA 426
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
312-594 |
5.68e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.11 E-value: 5.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 312 KLEVTNVKLEAARTKNEVERERNKIQSEMdglLSDKEVLKEAV--ERHKVLLVEKDQELVRKVQAAKEEVFGKIaalQDE 389
Cdd:pfam17380 295 KMEQERLRQEKEEKAREVERRRKLEEAEK---ARQAEMDRQAAiyAEQERMAMERERELERIRQEERKRELERI---RQE 368
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 390 KLELE-SRLAHLEKVKLEQDAWRQTEKDQYEEKLRVVQLAEESSKRELQCLRLKIQQQAIQTEELEEKKRERDD------ 462
Cdd:pfam17380 369 EIAMEiSRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQEEARQREVRRLEEerarem 448
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 463 --LKQQIQDMQLQVASLSQSENDlleyNQKLKETVERLRQECQNARTQAEKAqleTEKTLEYKRIEWLEEKHMLTQRITE 540
Cdd:pfam17380 449 erVRLEEQERQQQVERLRQQEEE----RKRKKLELEKEKRDRKRAEEQRRKI---LEKELEERKQAMIEEERKRKLLEKE 521
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*..
gi 971371611 541 KEEKYNEVKNKLCRAAVAQKKRKTLNDNKQRRMQEKLQLL---EAKIEELEKENQVL 594
Cdd:pfam17380 522 MEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKAteeRSRLEAMEREREMM 578
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
321-616 |
8.03e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 39.67 E-value: 8.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 321 EAARTKNEVERERNKIQSEMDGLLSDKEVLKEAVERHKVLLVEKDQELVRKVQAAKEEVFGKIAALQDEKLELESRLAHL 400
Cdd:TIGR02169 227 ELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASL 306
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 401 EKvkleQDAWRQTEKDQYEEKLRVVQLAEESSKRELQCLRLKIQQQaiqteeleekKRERDDLKQQIqdmqlqvASLSQS 480
Cdd:TIGR02169 307 ER----SIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEE----------RKRRDKLTEEY-------AELKEE 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 481 ENDLLEYNQKLKETVERLRQECQNARTQAEKAQLETEktleykriEWLEEKHMLTQRITEKEEKYNEVKNKLCRAAVAQK 560
Cdd:TIGR02169 366 LEDLRAELEEVDKEFAETRDELKDYREKLEKLKREIN--------ELKRELDRLQEELQRLSEELADLNAAIAGIEAKIN 437
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*.
gi 971371611 561 KRKTLNDNKQRRMQEKLQLLEAKIEELEKENQVLNRQNvsyEEYARLQKRLKDLQR 616
Cdd:TIGR02169 438 ELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLK---EEYDRVEKELSKLQR 490
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
131-626 |
9.32e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 39.74 E-value: 9.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 131 NEMEKYRTEYNKlrYEHTFLKSEFEHQKEEHEHVLEEEKIKYEAEIARLEKDKEELHNQLVSVDPTRDSKRVEVLSR-EK 209
Cdd:PTZ00121 1067 GQDEGLKPSYKD--FDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKaEE 1144
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 210 AQLCQKLKGLEAEVAELRAERDNCGVQAENVQRVQVRQLAELQSLARSLEAEKKSAEQHIGRIEEELQMCREQNFLLTSK 289
Cdd:PTZ00121 1145 ARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAK 1224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 290 LHKSEQEVNSLAAKVEELKQSHKLEVTNV--KLEAARTKNEVERERNKIQSEMdgllSDKEVLKEAVERHKVLLVEKDQE 367
Cdd:PTZ00121 1225 KAEAVKKAEEAKKDAEEAKKAEEERNNEEirKFEEARMAHFARRQAAIKAEEA----RKADELKKAEEKKKADEAKKAEE 1300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 368 lVRKVQAAKEEVFGKIAALQDEKLELESRLAHLEKVKLEQDAWRQTEKDQYEEKLRVVQLAEESSKRELQCLRL-KIQQQ 446
Cdd:PTZ00121 1301 -KKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKeEAKKK 1379
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 447 AIQTEELEEKKRERDDLKQQIQDM-----QLQVASLSQSENDLLEYNQKLKETVERLRQECQNART---------QAEKA 512
Cdd:PTZ00121 1380 ADAAKKKAEEKKKADEAKKKAEEDkkkadELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKadeakkkaeEAKKA 1459
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 971371611 513 QLETEKTLEYKRIEWLEEKHMLTQRITEKEEKYNEVKNK---LCRAAVAQKKRKTLNDNKQRRMQEKLQLLEA--KIEEL 587
Cdd:PTZ00121 1460 EEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKadeAKKAAEAKKKADEAKKAEEAKKADEAKKAEEakKADEA 1539
|
490 500 510 520
....*....|....*....|....*....|....*....|.
gi 971371611 588 EKENQVLNRQNVSYEEYARL--QKRLKDLQRRHNEFRSLIL 626
Cdd:PTZ00121 1540 KKAEEKKKADELKKAEELKKaeEKKKAEEAKKAEEDKNMAL 1580
|
|
| |
