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Conserved domains on  [gi|1390068916|ref|XP_015147355|]
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zinc finger protein 280D isoform X6 [Gallus gallus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF4195 super family cl16429
Domain of unknown function (DUF4195); This family is found at the N-terminus of metazoan ...
11-103 4.71e-14

Domain of unknown function (DUF4195); This family is found at the N-terminus of metazoan proteins that carry PHD-like zinc-finger domains. The function is not known.


The actual alignment was detected with superfamily member pfam13836:

Pssm-ID: 463993 [Multi-domain]  Cd Length: 184  Bit Score: 71.33  E-value: 4.71e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1390068916  11 PVSRPVT-IPVTTQPVSRNITVPLVAQPVSRPlttvttqpiilnqDYIMDSPPDAPDNTSGILFGVRQNSgVPQYQTEPT 89
Cdd:pfam13836  52 PTSNPVAaLPVSFHPESRSSDSSVIVQPLSKP-------------DYKKNSPQVVSDNSSDLLFDLTQDT-VPQSQVGPA 117
                          90
                  ....*....|....
gi 1390068916  90 VSVTDTNTASSNIK 103
Cdd:pfam13836 118 LSVEGMNESSFVSK 131
 
Name Accession Description Interval E-value
DUF4195 pfam13836
Domain of unknown function (DUF4195); This family is found at the N-terminus of metazoan ...
11-103 4.71e-14

Domain of unknown function (DUF4195); This family is found at the N-terminus of metazoan proteins that carry PHD-like zinc-finger domains. The function is not known.


Pssm-ID: 463993 [Multi-domain]  Cd Length: 184  Bit Score: 71.33  E-value: 4.71e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1390068916  11 PVSRPVT-IPVTTQPVSRNITVPLVAQPVSRPlttvttqpiilnqDYIMDSPPDAPDNTSGILFGVRQNSgVPQYQTEPT 89
Cdd:pfam13836  52 PTSNPVAaLPVSFHPESRSSDSSVIVQPLSKP-------------DYKKNSPQVVSDNSSDLLFDLTQDT-VPQSQVGPA 117
                          90
                  ....*....|....
gi 1390068916  90 VSVTDTNTASSNIK 103
Cdd:pfam13836 118 LSVEGMNESSFVSK 131
 
Name Accession Description Interval E-value
DUF4195 pfam13836
Domain of unknown function (DUF4195); This family is found at the N-terminus of metazoan ...
11-103 4.71e-14

Domain of unknown function (DUF4195); This family is found at the N-terminus of metazoan proteins that carry PHD-like zinc-finger domains. The function is not known.


Pssm-ID: 463993 [Multi-domain]  Cd Length: 184  Bit Score: 71.33  E-value: 4.71e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1390068916  11 PVSRPVT-IPVTTQPVSRNITVPLVAQPVSRPlttvttqpiilnqDYIMDSPPDAPDNTSGILFGVRQNSgVPQYQTEPT 89
Cdd:pfam13836  52 PTSNPVAaLPVSFHPESRSSDSSVIVQPLSKP-------------DYKKNSPQVVSDNSSDLLFDLTQDT-VPQSQVGPA 117
                          90
                  ....*....|....
gi 1390068916  90 VSVTDTNTASSNIK 103
Cdd:pfam13836 118 LSVEGMNESSFVSK 131
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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