|
Name |
Accession |
Description |
Interval |
E-value |
| SH3BGR |
pfam04908 |
SH3-binding, glutamic acid-rich protein; |
1-104 |
4.31e-38 |
|
SH3-binding, glutamic acid-rich protein;
Pssm-ID: 398530 [Multi-domain] Cd Length: 92 Bit Score: 134.13 E-value: 4.31e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 1 MVLKVYVSGMSGNKEVKKRQQRVLMILDSKNIKYDTVDITEpgKESEKELMQnkstsnggtvSDPEPRHPLPPQLFNDDE 80
Cdd:pfam04908 1 MVLKVYVASSSGSPEIKKKQQRVLMILDANKIPFDEVDITK--DEEQRRWMR----------ENPPNGAPLPPQIFNEDQ 68
|
90 100
....*....|....*....|....
gi 1013918153 81 YCGDYDAFDMANEIDTLEVFLKLA 104
Cdd:pfam04908 69 YCGDYDAFFEAVEANTLYEFLGLA 92
|
|
| GRX_SH3BGR |
cd03030 |
Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a ... |
2-103 |
6.04e-35 |
|
Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. The SH3BGR gene was cloned in an effort to identify genes mapping to chromosome 21, which could be involved in the pathogenesis of congenital heart disease affecting Down syndrome newborns. Several human SH3BGR-like (SH3BGRL) genes have been identified since, mapping to different locations in the chromosome. Of these, SH3BGRL3 was identified as a tumor necrosis factor (TNF) alpha inhibitory protein and was also named TIP-B1. Upregulation of expression of SH3BGRL3 is associated with differentiation. It has been suggested that it functions as a regulator of differentiation-related signal transduction pathways.
Pssm-ID: 239328 [Multi-domain] Cd Length: 92 Bit Score: 125.85 E-value: 6.04e-35
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 2 VLKVYVSGMSGNKEVKKRQQRVLMILDSKNIKYDTVDITEpgKESEKELMQNKSTSNGGtvsdpeprHPLPPQLFNDDEY 81
Cdd:cd03030 1 VIKVYIASSSGSTEIKKRQQEVLGFLEAKKIEFEEVDISM--NEENRQWMRENVPNENG--------KPLPPQIFNGDEY 70
|
90 100
....*....|....*....|..
gi 1013918153 82 CGDYDAFDMANEIDTLEVFLKL 103
Cdd:cd03030 71 CGDYEAFFEAKENNTLEEFLKL 92
|
|
| GRX_family |
cd02066 |
Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins ... |
14-93 |
1.28e-11 |
|
Glutaredoxin (GRX) family; composed of GRX, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH -> GSH reductase -> GSH -> GRX -> protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including human GRX1 and GRX2, as well as E. coli GRX1 and GRX3, which are members of this family. E. coli GRX2, however, is a 24-kDa protein that belongs to the GSH S-transferase (GST) family.
Pssm-ID: 239017 [Multi-domain] Cd Length: 72 Bit Score: 60.17 E-value: 1.28e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 14 KEVKKRQQRVLMILDSKNIKYDTVDITEPGKEsEKELMQNkstSNGGTVsdpeprhplpPQLFNDDEYCGDYDAFDMANE 93
Cdd:cd02066 7 KSTCPYCKRAKRLLESLGIEFEEIDILEDGEL-REELKEL---SGWPTV----------PQIFINGEFIGGYDDLKALHE 72
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
163-410 |
2.07e-10 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 63.48 E-value: 2.07e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 163 GKDKENSKGEDEDADEEKAEQKTETEESGDKKTEEETADAEGETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEVGK 242
Cdd:TIGR00927 646 GEEGERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHEGETEAEG 725
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 243 SEDVKDDEDEKSEDVKDDEDEKSEDVKDDEDEKSEDVKDKLEGSETAETSDDAETTEkpdVEAtNDDGDTKSEKIETQEK 322
Cdd:TIGR00927 726 TEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGE---IQA-GEDGEMKGDEGAEGKV 801
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 323 SEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSATKSEVKSTEDEIVESEDVKDDELDKN 402
Cdd:TIGR00927 802 EHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGGDSEEEEEEEEEEEEEEEEEE 881
|
....*...
gi 1013918153 403 ESTKKVEE 410
Cdd:TIGR00927 882 EEEEEEEE 889
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
163-407 |
4.71e-10 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 62.32 E-value: 4.71e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 163 GKDKENsKGEDEDADEEKAEQKTETEESGDK----KTEEETADAEGETQEksEEVDTKEKSEVESTKDDevGKSEDVKDD 238
Cdd:TIGR00927 664 GGEAEQ-EGETETKGENESEGEIPAERKGEQegegEIEAKEADHKGETEA--EEVEHEGETEAEGTEDE--GEIETGEEG 738
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 239 EVGKSEDVKDDEDEKSEDVKDDEDEKSEDVKDDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVEATNDDGdtksEKIE 318
Cdd:TIGR00927 739 EEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGETEAG----EKDE 814
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 319 TQEKSEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKS-GENVKEDSSDADSATKSEVKSTEDEIVESEDVKDD 397
Cdd:TIGR00927 815 HEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSdGGDSEEEEEEEEEEEEEEEEEEEEEEEEEENEEPL 894
|
250
....*....|
gi 1013918153 398 ELDKNESTKK 407
Cdd:TIGR00927 895 SLEWPETRQK 904
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
164-480 |
3.77e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 59.38 E-value: 3.77e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 164 KDKENSKGEDEDADEEKAEQKTETEESgdKKTEEETADAEGETQEKSEEVDTKEKSEvESTKDDEVGKsedvKDDEVGKS 243
Cdd:PTZ00121 1321 KKKAEEAKKKADAAKKKAEEAKKAAEA--AKAEAEAAADEAEAAEEKAEAAEKKKEE-AKKKADAAKK----KAEEKKKA 1393
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 244 EDVKDDEDE---KSEDVKDDEDEKSEdvKDDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVEATNDDGDTKseKIETQ 320
Cdd:PTZ00121 1394 DEAKKKAEEdkkKADELKKAAAAKKK--ADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKK--KAEEA 1469
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 321 EKSEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVK--EDSSDADSATKSEVKSTEDEIVESEDV-KDD 397
Cdd:PTZ00121 1470 KKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKkaEEAKKADEAKKAEEAKKADEAKKAEEKkKAD 1549
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 398 ELDKNESTKKVEEVDSTEISEVVSTEDEKSEDVKEKPDENEAQEKPEEVITAEKSVEETEEPTEVEKPAETKTEDTPENE 477
Cdd:PTZ00121 1550 ELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAE 1629
|
...
gi 1013918153 478 ESK 480
Cdd:PTZ00121 1630 EEK 1632
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
104-325 |
8.97e-09 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 58.08 E-value: 8.97e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 104 APADTTAVSTAQIELKQENGDAKKEEAEAEAEDKKPESGDGDVDVKEEAAEKAENEDADGKDKENSKGEDEDADEEKAEQ 183
Cdd:TIGR00927 651 RPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGTEDEG 730
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 184 KTETEESGDKKTEEETADAEGEtQEKSEEVDTKEkSEVESTKDDEVGKSEDVKDDEVGKSEDVKDDEDEKSEDVKDDEDE 263
Cdd:TIGR00927 731 EIETGEEGEEVEDEGEGEAEGK-HEVETEGDRKE-TEHEGETEAEGKEDEDEGEIQAGEDGEMKGDEGAEGKVEHEGETE 808
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1013918153 264 KSEDVKDDEDEKSEDVKDKLEGSE-----TAETSDDAETTEK-PDVEATNDDGDTKSEKIETQEKSEE 325
Cdd:TIGR00927 809 AGEKDEHEGQSETQADDTEVKDETgeqelNAENQGEAKQDEKgVDGGGGSDGGDSEEEEEEEEEEEEE 876
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
178-480 |
1.18e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 54.76 E-value: 1.18e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 178 EEKAEQKTETEESGDKKTEEETAD-AEGETQEKSEEVDTKEKSEVESTKDDEVGKSEDV-KDDEVGKSEDV-KDDEDEKS 254
Cdd:PTZ00121 1463 KKKAEEAKKADEAKKKAEEAKKADeAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAkKADEAKKAEEAkKADEAKKA 1542
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 255 EDV-KDDEDEKSEDVKDDEDEKSEDVKDKlegSETAETSDDAETTEKPDVEATNDDGDTKSEKIETQEKSEEVDAAEESE 333
Cdd:PTZ00121 1543 EEKkKADELKKAEELKKAEEKKKAEEAKK---AEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAK 1619
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 334 AESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSATKSEVKSTEDEIVESEDVKDDELDKN----------E 403
Cdd:PTZ00121 1620 IKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKkaaealkkeaE 1699
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1013918153 404 STKKVEEVDSTEISEVVSTEDEKSEDVKEKPDENEAQEKPEEviTAEKSVEETEEPTEVEKPAETKTEDTPENEESK 480
Cdd:PTZ00121 1700 EAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEE--DKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIR 1774
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
165-481 |
1.64e-07 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 54.23 E-value: 1.64e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 165 DKENSKGEDEDaDEEKAEQKTETEESGDKKTEeetADAEGETQEKSEEVDTKEkSEVESTKDDEVGKSEDVKDDEVGKSE 244
Cdd:TIGR00927 636 AEAEHTGERTG-EEGERPTEAEGENGEESGGE---AEQEGETETKGENESEGE-IPAERKGEQEGEGEIEAKEADHKGET 710
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 245 DVKDDEDEKSEDVKDDEDEKSEDVKDDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVEATNDDGDTKSEKIETQEKSE 324
Cdd:TIGR00927 711 EAEEVEHEGETEAEGTEDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGE 790
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 325 evdaaeeseaesskekaeenesTKVNEDDKSVDVNEKSGENVKEDSSDADSATKSEVKSTEDEIVESEDVKDDELDKNES 404
Cdd:TIGR00927 791 ----------------------MKGDEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQD 848
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1013918153 405 TKKVeevDSTEISEVVSTEDEKSEDVKEKPDENEAQEKPEEvitaeksveeteeptevekpaetktedtpENEESKP 481
Cdd:TIGR00927 849 EKGV---DGGGGSDGGDSEEEEEEEEEEEEEEEEEEEEEEE-----------------------------EEENEEP 893
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
177-482 |
4.48e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 52.84 E-value: 4.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 177 DEEKAEQKTETEESgdKKTEEETADAEGETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEVGKSEDV-KDDEDEKSE 255
Cdd:PTZ00121 1222 DAKKAEAVKKAEEA--KKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKkKADEAKKAE 1299
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 256 DVKDDEDEKSedvKDDEDEKSEDVKDKLE-GSETAETSDDAETTEKPDVEATNDDGDTKSEKIETQEKSEEVDAAEESEA 334
Cdd:PTZ00121 1300 EKKKADEAKK---KAEEAKKADEAKKKAEeAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEA 1376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 335 ESSKEK--AEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSATKSEVKSTEDEIVESEDVKDDELDK-NESTKKVEEV 411
Cdd:PTZ00121 1377 KKKADAakKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKaDEAKKKAEEA 1456
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1013918153 412 DSTEISEVVSTEDEKSEDVKEKPDE----NEAQEKPEEvitAEKSVEETEEPTEVEKPAE--TKTEDTPENEESKPA 482
Cdd:PTZ00121 1457 KKAEEAKKKAEEAKKADEAKKKAEEakkaDEAKKKAEE---AKKKADEAKKAAEAKKKADeaKKAEEAKKADEAKKA 1530
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
91-479 |
8.93e-07 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 51.55 E-value: 8.93e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 91 ANEIDTLEVFLKLAPADTTAVSTAQIELKQENGDAKKEEAEAEAEDKKPESGDGDVDVKEEAAEKAENEDADGKDKENSK 170
Cdd:COG5271 330 LAAADDEDDDDSAAEDAAEEAATAEDSAAEDTQDAEDEAAGEAADESEGADTDAAADEADAAADDSADDEEASADGGTSP 409
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 171 GEDEDADEEKAEQKTETEESGDKKTEEETADAEGETQEKSEEV--DTKEKSEVESTKDDEVGKSEDVKDDEVGKSEDVKD 248
Cdd:COG5271 410 TSDTDEEEEEADEDASAGETEDESTDVTSAEDDIATDEEADSLadEEEEAEAELDTEEDTESAEEDADGDEATDEDDASD 489
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 249 DEDEKSEDVKDDEDEKSEDVkdDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVEATNDDGDTKSEKIETQEKSEEVDA 328
Cdd:COG5271 490 DGDEEEAEEDAEAEADSDEL--TAEETSADDGADTDAAADPEDSDEDALEDETEGEENAPGSDQDADETDEPEATAEEDE 567
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 329 AEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSATKSEVKSTEDEIVESEDVKDDELDKNESTKKV 408
Cdd:COG5271 568 PDEAEAETEDATENADADETEESADESEEAEASEDEAAEEEEADDDEADADADGAADEEETEEEAAEDEAAEPETDASEA 647
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1013918153 409 EEVDSTEISEVVSTEDEKSEDVKEKPD-ENEAQEKPEEVITAEKSVEETEEPTEVEKPAETKTEDTPENEES 479
Cdd:COG5271 648 ADEDADAETEAEASADESEEEAEDESEtSSEDAEEDADAAAAEASDDEEETEEADEDAETASEEADAEEADT 719
|
|
| PRK05901 |
PRK05901 |
RNA polymerase sigma factor; Provisional |
96-293 |
1.46e-06 |
|
RNA polymerase sigma factor; Provisional
Pssm-ID: 235640 [Multi-domain] Cd Length: 509 Bit Score: 50.76 E-value: 1.46e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 96 TLEVFLKLAPADTTAVSTAQIELKQENGDAKKEEAEAEAEDKKPESGDGDVDVKEEAAEKAENEDADGKD-KENSKGEDE 174
Cdd:PRK05901 13 EEEAKKKLKKLAAKSKSKGFITKEEIKEALESKKKTPEQIDQVLIFLSGMVKDTDDATESDIPKKKTKTAaKAAAAKAPA 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 175 DADEEKAEQKTETEESGDKKTEEETADAEGETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEVGKSEDVKDDEDEKS 254
Cdd:PRK05901 93 KKKLKDELDSSKKAEKKNALDKDDDLNYVKDIDVLNQADDDDDDDDDDDLDDDDIDDDDDDEDDDEDDDDDDVDDEDEEK 172
|
170 180 190
....*....|....*....|....*....|....*....
gi 1013918153 255 EDVKDDEDEKSEDVKDDEDEKSEDVKDKLEGSETAETSD 293
Cdd:PRK05901 173 KEAKELEKLSDDDDFVWDEDDSEALRQARKDAKLTATAD 211
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
164-432 |
2.23e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.52 E-value: 2.23e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 164 KDKENSKGEDEDADEEKAEQKTETEESGDKKTEEETADAEGETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEVGKS 243
Cdd:PTZ00121 1576 KNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKA 1655
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 244 EDVKDDEDEKSEDVKDDEDEKSEDVKDDEDEK---SEDVKDKLEGSETAETSDDAETTEKPDVEATNDDGDTKSEKIETQ 320
Cdd:PTZ00121 1656 EEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEkkaAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEA 1735
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 321 EKSEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSATKSEV-KSTEDEIVESEDVKDDEL 399
Cdd:PTZ00121 1736 KKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVdKKIKDIFDNFANIIEGGK 1815
|
250 260 270
....*....|....*....|....*....|...
gi 1013918153 400 DKNESTKKVEEVDSTEISEVVSTEDEKSEDVKE 432
Cdd:PTZ00121 1816 EGNLVINDSKEMEDSAIKEVADSKNMQLEEADA 1848
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
139-482 |
2.24e-06 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 50.40 E-value: 2.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 139 PESGDGDVDVKEEAAEKAENEDADGKDKENSKGEDEDADEEKAEQKTETEESGDKKTEEETADAEGETQEKSEEVDTKEK 218
Cdd:COG5271 359 EDTQDAEDEAAGEAADESEGADTDAAADEADAAADDSADDEEASADGGTSPTSDTDEEEEEADEDASAGETEDESTDVTS 438
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 219 SEVESTKDDEvgkSEDVKDDEVGKSEDVKDDEDEKSEDVKDDEDEKSEDvKDDEDEKSEDVKDklEGSETAETSDDAETT 298
Cdd:COG5271 439 AEDDIATDEE---ADSLADEEEEAEAELDTEEDTESAEEDADGDEATDE-DDASDDGDEEEAE--EDAEAEADSDELTAE 512
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 299 EKPDVEATNDDGDTKSEKIETQEKSEEVDAAEESEAESSKEKAEENESTKVNEDDKSvdvNEKSGENVKEDSSDADSATK 378
Cdd:COG5271 513 ETSADDGADTDAAADPEDSDEDALEDETEGEENAPGSDQDADETDEPEATAEEDEPD---EAEAETEDATENADADETEE 589
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 379 SEVKSTEDEIVESEDVKDDELDKNESTKKVEEVDSTEISEVVSTEDEKSEDvkEKPDENEAQEKPEEVITAEKSVEETEE 458
Cdd:COG5271 590 SADESEEAEASEDEAAEEEEADDDEADADADGAADEEETEEEAAEDEAAEP--ETDASEAADEDADAETEAEASADESEE 667
|
330 340
....*....|....*....|....
gi 1013918153 459 PTEVEKPAETKTEDTPENEESKPA 482
Cdd:COG5271 668 EAEDESETSSEDAEEDADAAAAEA 691
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
164-478 |
2.27e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 50.52 E-value: 2.27e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 164 KDKENSKGEDEDADEEKAEQKTETEESGDKKTEEETADAEGETQEKSEEVDTKEKSEVESTKDDEVGKsedvKDDEVGKS 243
Cdd:PTZ00121 1397 KKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKK----KAEEAKKA 1472
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 244 EDVKDDEDEKSEDVKDDEDEKSEDVKDDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVEATNDDGDTKSEKIETQE-- 321
Cdd:PTZ00121 1473 DEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADElk 1552
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 322 KSEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSATKSEVKSTEDEIVESEDVK------ 395
Cdd:PTZ00121 1553 KAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKkaeeek 1632
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 396 ----------DDELDKNESTKKVEEVDSTEISEVVSTEDEKSEDVKEKPDENEAQEKPEEVITAEKSVEETEEPTEVEKP 465
Cdd:PTZ00121 1633 kkveqlkkkeAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEA 1712
|
330
....*....|...
gi 1013918153 466 AETKTEDTPENEE 478
Cdd:PTZ00121 1713 EEKKKAEELKKAE 1725
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
42-288 |
3.12e-06 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 49.99 E-value: 3.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 42 PGKESEKELMQNKSTSNGGTVSDPEPRHPLPPQLFNDDEYCGDYDA--FDMANEIDTLEVFLKLAPADTTAVSTAQIElK 119
Cdd:TIGR00927 656 EGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAkeADHKGETEAEEVEHEGETEAEGTEDEGEIE-T 734
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 120 QENGDAKKEEAEAEAEDKKPESGDGDVDVKEEAAEKAENEDADGKDKENSKGED-EDADEEKAEQKTETEESGDKKTEEE 198
Cdd:TIGR00927 735 GEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDgEMKGDEGAEGKVEHEGETEAGEKDE 814
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 199 TADAEGETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEVGKseDVKDDEDEKSEDvKDDEDEKSEDVKDDEDEKSED 278
Cdd:TIGR00927 815 HEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGS--DGGDSEEEEEEE-EEEEEEEEEEEEEEEEEEENE 891
|
250
....*....|
gi 1013918153 279 VKDKLEGSET 288
Cdd:TIGR00927 892 EPLSLEWPET 901
|
|
| PRK05901 |
PRK05901 |
RNA polymerase sigma factor; Provisional |
147-319 |
5.12e-06 |
|
RNA polymerase sigma factor; Provisional
Pssm-ID: 235640 [Multi-domain] Cd Length: 509 Bit Score: 48.84 E-value: 5.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 147 DVKEEAAEKAENEDADGKDKENSKGEDEDADEEKAEQKTETEESGDKKTEEETADAEGETQEKSEEVDTKEKSEVESTKD 226
Cdd:PRK05901 37 EIKEALESKKKTPEQIDQVLIFLSGMVKDTDDATESDIPKKKTKTAAKAAAAKAPAKKKLKDELDSSKKAEKKNALDKDD 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 227 DEVGKSEDVKDDEVGKSEDVKDDEDEKSEDVKDDEDEKSEDVKDDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVEAT 306
Cdd:PRK05901 117 DLNYVKDIDVLNQADDDDDDDDDDDLDDDDIDDDDDDEDDDEDDDDDDVDDEDEEKKEAKELEKLSDDDDFVWDEDDSEA 196
|
170
....*....|...
gi 1013918153 307 NDDGDTKSEKIET 319
Cdd:PRK05901 197 LRQARKDAKLTAT 209
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
104-479 |
6.52e-06 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 48.86 E-value: 6.52e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 104 APADTTAVSTAQIELKQENGDAKKEEAEAEAEDKKPESGDGDVDVKEEAAEKAENEDADGKDKENSKGEDEDADEEKAEQ 183
Cdd:COG5271 194 TDAVELTATLGATVTTDPGDSVAADDDLAAEEGASAVVEEEDASEDAVAAADETLLADDDDTESAGATAEVGGTPDTDDE 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 184 KTETEESGDKKTEEETADAEGETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEVGKSEDVKDDEDEKSEDVKDDEDE 263
Cdd:COG5271 274 ATDDADGLEAAEDDALDAELTAAQAADPESDDDADDSTLAALEGAAEDTEIATADELAAADDEDDDDSAAEDAAEEAATA 353
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 264 KSEDVKDDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVEATNDDGDTKSEKIETQEKSEEVDAAEESEAESSKEKAEE 343
Cdd:COG5271 354 EDSAAEDTQDAEDEAAGEAADESEGADTDAAADEADAAADDSADDEEASADGGTSPTSDTDEEEEEADEDASAGETEDES 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 344 NESTKVNED---DKSVDVNEKSGENVKEDSSDADSATKSEVKSTEDEIVESEDVKDDELDKNESTKKVEEVDSTEISEVV 420
Cdd:COG5271 434 TDVTSAEDDiatDEEADSLADEEEEAEAELDTEEDTESAEEDADGDEATDEDDASDDGDEEEAEEDAEAEADSDELTAEE 513
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 421 STEDEKSE-DVKEKPDENEAQEKPEEVITAEKSVEETEEPTEVEKPAETKTEDTPENEES 479
Cdd:COG5271 514 TSADDGADtDAAADPEDSDEDALEDETEGEENAPGSDQDADETDEPEATAEEDEPDEAEA 573
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
164-442 |
6.79e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.98 E-value: 6.79e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 164 KDKENSKGEDEDADEEKAEQKTETEESGDKKTEEETADAEGETQE----KSEEVDTKEKSEVESTKDDEVGKSEDVK--- 236
Cdd:PTZ00121 1632 KKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKaeeaKKAEEDEKKAAEALKKEAEEAKKAEELKkke 1711
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 237 DDEVGKSEDVKDDEDE---KSEDVKDDEDE---KSEDVKDDEDEKSEDVKDKLEGSETAETS------------DDAETT 298
Cdd:PTZ00121 1712 AEEKKKAEELKKAEEEnkiKAEEAKKEAEEdkkKAEEAKKDEEEKKKIAHLKKEEEKKAEEIrkekeavieeelDEEDEK 1791
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 299 EKPDVEATNDDGDTKSEKIETQEKSEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSATK 378
Cdd:PTZ00121 1792 RRMEVDKKIKDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFN 1871
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1013918153 379 SEVKSTEDEIVESEDVKDDELDKNESTKKVEEVDSTEISEVVSTEDEKSEDVKEKPDENEAQEK 442
Cdd:PTZ00121 1872 KEKDLKEDDEEEIEEADEIEKIDKDDIEREIPNNNMAGKNNDIIDDKLDKDEYIKRDAEETREE 1935
|
|
| 2A1904 |
TIGR00927 |
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ... |
144-302 |
7.17e-06 |
|
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]
Pssm-ID: 273344 [Multi-domain] Cd Length: 1096 Bit Score: 48.84 E-value: 7.17e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 144 GDVDVKEEAAEKAENEDADGKDKENSKGEDEDADEEKAEQKTETEESGDKKTEEetadaeGETQEKSEEVDTKEKSEVES 223
Cdd:TIGR00927 742 EDEGEGEAEGKHEVETEGDRKETEHEGETEAEGKEDEDEGEIQAGEDGEMKGDE------GAEGKVEHEGETEAGEKDEH 815
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 224 TKDDEVGKSEDVKDDEVGKSEDVKDDEDEKSEDVKDDEDE------KSEDVKDDEDEKSEDVKDKLEGSETAETSDDAET 297
Cdd:TIGR00927 816 EGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGggsdggDSEEEEEEEEEEEEEEEEEEEEEEEEEENEEPLS 895
|
....*
gi 1013918153 298 TEKPD 302
Cdd:TIGR00927 896 LEWPE 900
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
113-478 |
7.42e-06 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 48.86 E-value: 7.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 113 TAQIELKQENGDAKKEEAEAEAEDKKPESGDGDVDVKEEAAEKAENEDADGKDKENSKGED-EDADEEKAEQKTETEESG 191
Cdd:COG5271 458 EAEAELDTEEDTESAEEDADGDEATDEDDASDDGDEEEAEEDAEAEADSDELTAEETSADDgADTDAAADPEDSDEDALE 537
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 192 DKKTEEETADAEGETQEKSEEVDTKEKSEVESTKDDEvgkSEDVKDDEVGKSEDVKDDEDEKSEDVKDDEDEKSEDVKDD 271
Cdd:COG5271 538 DETEGEENAPGSDQDADETDEPEATAEEDEPDEAEAE---TEDATENADADETEESADESEEAEASEDEAAEEEEADDDE 614
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 272 EDEKSEDVKDKLEGSETAETsDDAETTEKPDVEATNDDGDTKSEKIETQEKSEEVDAAEESEAESSKEKAEENESTKVNE 351
Cdd:COG5271 615 ADADADGAADEEETEEEAAE-DEAAEPETDASEAADEDADAETEAEASADESEEEAEDESETSSEDAEEDADAAAAEASD 693
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 352 DDKSVDVNEKSGENVKEDSSDADSATKSEVKSTEDEIVESEDVKDDELDKNESTKKVEEVDSTEISEVVSTEDEKSEDVK 431
Cdd:COG5271 694 DEEETEEADEDAETASEEADAEEADTEADGTAEEAEEAAEEAESADEEAASLPDEADAEEEAEEAEEAEEDDADGLEEAL 773
|
330 340 350 360
....*....|....*....|....*....|....*....|....*..
gi 1013918153 432 EKPDENEAQEKPEEVITAEKSVEETEEPTEVEKPAETKTEDTPENEE 478
Cdd:COG5271 774 EEEKADAEEAATDEEAEAAAEEKEKVADEDQDTDEDALLDEAEADEE 820
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
168-480 |
1.35e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 48.21 E-value: 1.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 168 NSKGEDEDADEEKAEQKTETEESGDKKTEEETADAEGETQEKSEEVDTKEKSEvESTKDDEVGKSEDVKddevgKSEDVK 247
Cdd:PTZ00121 1073 KPSYKDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAE-DARKAEEARKAEDAR-----KAEEAR 1146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 248 DDEDEKSEDVKddedEKSEDVKDDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVEATNDDGDTKSEKIETQEKSEEVD 327
Cdd:PTZ00121 1147 KAEDAKRVEIA----RKAEDARKAEEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAED 1222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 328 AAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSATKSEVKSTEDEIVESEDV-KDDELDKNESTK 406
Cdd:PTZ00121 1223 AKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKkKADEAKKAEEKK 1302
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1013918153 407 KVEEV-DSTEISEVVSTEDEKSEDVKEKPDENEAQEKPEEVITAEKSVEETEEPTEVEKPAETKTEDTPENEESK 480
Cdd:PTZ00121 1303 KADEAkKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAK 1377
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
172-429 |
2.53e-05 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 46.96 E-value: 2.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 172 EDEDADEEKAEQKTETEESGDKKTEEETAdaegETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEVGKSEDVKDDED 251
Cdd:PTZ00108 1142 EEQEEVEEKEIAKEQRLKSKTKGKASKLR----KPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKK 1217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 252 EKSEDVKDDEDEKsedvKDDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVEatnDDGDTKSEKIETQEKSEEVDAAEE 331
Cdd:PTZ00108 1218 SNSSGSDQEDDEE----QKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLS---KEGKPKNAPKRVSAVQYSPPPPSK 1290
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 332 SEAESSKEKAEENESTKVNEDDKsvdvnEKSGENVKEDSSDADSATKSEVKSTEDEIVESEDVKDDELDKNESTKKVEEV 411
Cdd:PTZ00108 1291 RPDGESNGGSKPSSPTKKKVKKR-----LEGSLAALKKKKKSEKKTARKKKSKTRVKQASASQSSRLLRRPRKKKSDSSS 1365
|
250
....*....|....*...
gi 1013918153 412 DSTEISEVVSTEDEKSED 429
Cdd:PTZ00108 1366 EDDDDSEVDDSEDEDDED 1383
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
83-483 |
2.94e-05 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 46.93 E-value: 2.94e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 83 GDYDAFDMANEIDTLEVFLKLAPADTTAVSTAQIELKQENGDAKKEEAEAEAEDKKPESGDGDVDVKEEAAEKAENEDAD 162
Cdd:COG5271 394 DSADDEEASADGGTSPTSDTDEEEEEADEDASAGETEDESTDVTSAEDDIATDEEADSLADEEEEAEAELDTEEDTESAE 473
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 163 GKDKENSKGEDEDADEEKAEQKTETEESGDKKTEEETADA-EGETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEvg 241
Cdd:COG5271 474 EDADGDEATDEDDASDDGDEEEAEEDAEAEADSDELTAEEtSADDGADTDAAADPEDSDEDALEDETEGEENAPGSDQ-- 551
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 242 KSEDVKDDEDEKSEDVKDDEDEKSEDVKDDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVEATNDDGDTKSEKIETQE 321
Cdd:COG5271 552 DADETDEPEATAEEDEPDEAEAETEDATENADADETEESADESEEAEASEDEAAEEEEADDDEADADADGAADEEETEEE 631
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 322 KSEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDS-SDADSATKSEVKStEDEIVESEDVKDDELD 400
Cdd:COG5271 632 AAEDEAAEPETDASEAADEDADAETEAEASADESEEEAEDESETSSEDAeEDADAAAAEASDD-EEETEEADEDAETASE 710
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 401 KNESTKKVEEVDSTEISEVVSTEDEKSEDVKEKPDENEAQEKPEEVITAEKSVEETEEPTEVEKPAETKTEDTPENEESK 480
Cdd:COG5271 711 EADAEEADTEADGTAEEAEEAAEEAESADEEAASLPDEADAEEEAEEAEEAEEDDADGLEEALEEEKADAEEAATDEEAE 790
|
...
gi 1013918153 481 PAG 483
Cdd:COG5271 791 AAA 793
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
117-438 |
3.15e-05 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 46.93 E-value: 3.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 117 ELKQENGDAKKEEAEAEAEDKKPESGDGDVDVKEEAAEKAENEDADGKDKENSKGEDEDADEEKAEQKTETEESGDKKTE 196
Cdd:COG5271 551 QDADETDEPEATAEEDEPDEAEAETEDATENADADETEESADESEEAEASEDEAAEEEEADDDEADADADGAADEEETEE 630
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 197 EETADAEGETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEVGKSEDVKDDEDEKSEDVKDDEDEKSEDVKDDEDEKS 276
Cdd:COG5271 631 EAAEDEAAEPETDASEAADEDADAETEAEASADESEEEAEDESETSSEDAEEDADAAAAEASDDEEETEEADEDAETASE 710
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 277 EDvkdkLEGSETAETSDDAETTEKPDVEATNDDGDTKSEKIETQEKSEEVDAAEESEAESSKEKAEENEStKVNEDDKSV 356
Cdd:COG5271 711 EA----DAEEADTEADGTAEEAEEAAEEAESADEEAASLPDEADAEEEAEEAEEAEEDDADGLEEALEEE-KADAEEAAT 785
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 357 DVNEKSGENVKEDSSDADSATKSEVKSTEDEIVESEDVKDDELDKNESTKKVEEVDSTEISEVVSTEDEKSEDVKEKPDE 436
Cdd:COG5271 786 DEEAEAAAEEKEKVADEDQDTDEDALLDEAEADEEEDLDGEDEETADEALEDIEAGIAEDDEEDDDAAAAKDVDADLDLD 865
|
..
gi 1013918153 437 NE 438
Cdd:COG5271 866 AD 867
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
139-439 |
3.65e-05 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 46.44 E-value: 3.65e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 139 PESGDGDVDVKEEAAEKAENEDADGKDKENSKGEDEDADEEKAEQKTETEESGDKKTEEETADAEGETQEKSEEVDTKEK 218
Cdd:NF033609 558 PEDSDSDPGSDSGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSA 637
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 219 SEVESTKDDEVGKSEDVKDDEVGKSeDVKDDEDEKSEDVKDDEDEKSEDVKDDEDEKSEDVKDKLEGSETAETSDDAETT 298
Cdd:NF033609 638 SDSDSDSDSDSDSDSDSDSDSDSDS-DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 716
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 299 EKPDVEATNDDGDTKSEKIETQEKSEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDS-SDADSAT 377
Cdd:NF033609 717 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSdSDSDSDS 796
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1013918153 378 KSEVKSTEDEIVESEDVKDDELDKNESTKKVEEVDSTEISEVVSTEDEKSEDVKEKPDENEA 439
Cdd:NF033609 797 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSES 858
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
86-482 |
5.89e-05 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 45.78 E-value: 5.89e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 86 DAFDMANEIDTLEVFLKLAPADTTAVSTAQIELKQENGDAKKEEAEAEAEDKKPESGDGDVDVKEEAAEKAENEDADGKD 165
Cdd:COG5271 367 EAAGEAADESEGADTDAAADEADAAADDSADDEEASADGGTSPTSDTDEEEEEADEDASAGETEDESTDVTSAEDDIATD 446
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 166 KENSKGEDEDADEEKAEQKTETEESGDKKTEEETADAEGETQEKSEEVDTKEKSEVESTKDDEvgKSEDVKDDEVGKSED 245
Cdd:COG5271 447 EEADSLADEEEEAEAELDTEEDTESAEEDADGDEATDEDDASDDGDEEEAEEDAEAEADSDEL--TAEETSADDGADTDA 524
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 246 VKDDEDEKSEDVKDDEDEKSEDVKDDEDEKSEDVkdkLEGSETAETSDDAETTEKPDVEATNDDGDTKSEKIETQEKS-- 323
Cdd:COG5271 525 AADPEDSDEDALEDETEGEENAPGSDQDADETDE---PEATAEEDEPDEAEAETEDATENADADETEESADESEEAEAse 601
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 324 -EEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSATKSEVKSTEDEIVESEDVKDDELDKN 402
Cdd:COG5271 602 dEAAEEEEADDDEADADADGAADEEETEEEAAEDEAAEPETDASEAADEDADAETEAEASADESEEEAEDESETSSEDAE 681
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 403 ESTKKVEEVDSTEISEVVSTEDEKSEDVKEKPDENEAQEKPEEVITAEKSVEETEEPTEVEKPAETKTEDTPENEESKPA 482
Cdd:COG5271 682 EDADAAAAEASDDEEETEEADEDAETASEEADAEEADTEADGTAEEAEEAAEEAESADEEAASLPDEADAEEEAEEAEEA 761
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
77-478 |
7.11e-05 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 45.78 E-value: 7.11e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 77 NDDEYCGDYDAFDMANEIDTLEVFLKLAPADTTAVSTAQIELKQENGDAKKEEAEAEAEDKKPESGDGDVDVKEEAAEKA 156
Cdd:COG5271 445 TDEEADSLADEEEEAEAELDTEEDTESAEEDADGDEATDEDDASDDGDEEEAEEDAEAEADSDELTAEETSADDGADTDA 524
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 157 ENEDADGKDKENSKGEDEDADEEKAEQKTETEESGDKKTEEETADAEGETQEKSEEVDTKEKSEVESTKDDEVGKSEDVK 236
Cdd:COG5271 525 AADPEDSDEDALEDETEGEENAPGSDQDADETDEPEATAEEDEPDEAEAETEDATENADADETEESADESEEAEASEDEA 604
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 237 DDEVGKSEDVKDDEDEKSEDVKDDEDEKSED-VKDDEDEKSEDVKDKLEGSETAETSDDAETTEKPDveatNDDGDTKSE 315
Cdd:COG5271 605 AEEEEADDDEADADADGAADEEETEEEAAEDeAAEPETDASEAADEDADAETEAEASADESEEEAED----ESETSSEDA 680
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 316 KIETQEKSEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSATKSEVKSTEDEIVESEDVK 395
Cdd:COG5271 681 EEDADAAAAEASDDEEETEEADEDAETASEEADAEEADTEADGTAEEAEEAAEEAESADEEAASLPDEADAEEEAEEAEE 760
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 396 DDELDKNESTKKVEEVDSTEISEVVSTEDEKSEDVKEKPDENEAQEKPEEVITAEKSVEETEEPTEVEKPAETKTEDTPE 475
Cdd:COG5271 761 AEEDDADGLEEALEEEKADAEEAATDEEAEAAAEEKEKVADEDQDTDEDALLDEAEADEEEDLDGEDEETADEALEDIEA 840
|
...
gi 1013918153 476 NEE 478
Cdd:COG5271 841 GIA 843
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
162-479 |
1.07e-04 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 45.01 E-value: 1.07e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 162 DGKDKENSKGEDEDADEEKAEQKTETEESGDKKTEEETADAEGETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEVG 241
Cdd:COG5271 620 DGAADEEETEEEAAEDEAAEPETDASEAADEDADAETEAEASADESEEEAEDESETSSEDAEEDADAAAAEASDDEEETE 699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 242 KSEDVKDDEDEKSEDVKDDEDEksEDVKDDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVEATNDDGDTKSEKIETQE 321
Cdd:COG5271 700 EADEDAETASEEADAEEADTEA--DGTAEEAEEAAEEAESADEEAASLPDEADAEEEAEEAEEAEEDDADGLEEALEEEK 777
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 322 KSEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSATKSEvkSTEDEIVESEDVKDDELDK 401
Cdd:COG5271 778 ADAEEAATDEEAEAAAEEKEKVADEDQDTDEDALLDEAEADEEEDLDGEDEETADEALE--DIEAGIAEDDEEDDDAAAA 855
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1013918153 402 NESTKKVEEVDSTEISEVVSTEDEKSEDvkEKPDENEAQEKPEEVITAEKSVEETEEPTEVEKPAETKTEDTPENEES 479
Cdd:COG5271 856 KDVDADLDLDADLAADEHEAEEAQEAET--DADADADAGEADSSGESSAAAEDDDAAEDADSDDGANDEDDDDDAEEE 931
|
|
| PRK13108 |
PRK13108 |
prolipoprotein diacylglyceryl transferase; Reviewed |
172-322 |
1.28e-04 |
|
prolipoprotein diacylglyceryl transferase; Reviewed
Pssm-ID: 237284 [Multi-domain] Cd Length: 460 Bit Score: 44.58 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 172 EDEDADEEKAEQKTETEESGDK-----------KTEEETADAEGETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEV 240
Cdd:PRK13108 292 VDEALEREPAELAAAAVASAASavgpvgpgepnQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEADI 371
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 241 GKSEDvKDDEDEKSEDVKDDEDEKSEDVKDDEDEKSEDvKDKLEGSEtAETS--------DDAETTEKPDVEATNDDGDT 312
Cdd:PRK13108 372 EREQP-GDLAGQAPAAHQVDAEAASAAPEEPAALASEA-HDETEPEV-PEKAapipdpakPDELAVAGPGDDPAEPDGIR 448
|
170
....*....|
gi 1013918153 313 KSEKIETQEK 322
Cdd:PRK13108 449 RQDDFSSRRR 458
|
|
| PRK05901 |
PRK05901 |
RNA polymerase sigma factor; Provisional |
164-372 |
1.38e-04 |
|
RNA polymerase sigma factor; Provisional
Pssm-ID: 235640 [Multi-domain] Cd Length: 509 Bit Score: 44.22 E-value: 1.38e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 164 KDKENSKGEDEDADEEKAEQKTETEESGDKKTEEETADAEGETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEVGKS 243
Cdd:PRK05901 3 TASTKAELAAEEEAKKKLKKLAAKSKSKGFITKEEIKEALESKKKTPEQIDQVLIFLSGMVKDTDDATESDIPKKKTKTA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 244 EDVKDDEDEKSEDVKDDEDEKSEDVKDDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVEATNDDGDTKSEKIETQEKS 323
Cdd:PRK05901 83 AKAAAAKAPAKKKLKDELDSSKKAEKKNALDKDDDLNYVKDIDVLNQADDDDDDDDDDDLDDDDIDDDDDDEDDDEDDDD 162
|
170 180 190 200
....*....|....*....|....*....|....*....|....*....
gi 1013918153 324 EEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSD 372
Cdd:PRK05901 163 DDVDDEDEEKKEAKELEKLSDDDDFVWDEDDSEALRQARKDAKLTATAD 211
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
139-483 |
1.58e-04 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 44.62 E-value: 1.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 139 PESGDGDVDVKEEAAEKAENEDADGKDKENSKGEDEDADEEKAEQKTETEESGDKKTEEETADAEGETQEKSEEVDTKEK 218
Cdd:COG5271 188 EATPGGTDAVELTATLGATVTTDPGDSVAADDDLAAEEGASAVVEEEDASEDAVAAADETLLADDDDTESAGATAEVGGT 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 219 SEVESTKDDEVGKSEDVKDDEVGKSEDVKDDEDEKSEDVKDDEDEKSEDVKDDEDEKSEDVKDKLEGSETAETSDDAETT 298
Cdd:COG5271 268 PDTDDEATDDADGLEAAEDDALDAELTAAQAADPESDDDADDSTLAALEGAAEDTEIATADELAAADDEDDDDSAAEDAA 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 299 EKPDVEATNDDGDTKSEKIETQEKSEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSATK 378
Cdd:COG5271 348 EEAATAEDSAAEDTQDAEDEAAGEAADESEGADTDAAADEADAAADDSADDEEASADGGTSPTSDTDEEEEEADEDASAG 427
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 379 SEVKSTEDEIVESEDVKDDE-----LDKNESTKKVEEVDSTEISEVVSTEDEKSEDVKEKPDENEAQEKPEEVITAEKSV 453
Cdd:COG5271 428 ETEDESTDVTSAEDDIATDEeadslADEEEEAEAELDTEEDTESAEEDADGDEATDEDDASDDGDEEEAEEDAEAEADSD 507
|
330 340 350
....*....|....*....|....*....|
gi 1013918153 454 EETEEPTEVEKPAETKTEDTPENEESKPAG 483
Cdd:COG5271 508 ELTAEETSADDGADTDAAADPEDSDEDALE 537
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
180-482 |
2.05e-04 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 44.36 E-value: 2.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 180 KAEQKTETEESgdKKTEEETADAEGETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEVGKSEDVKDDEDE------- 252
Cdd:PTZ00121 1171 KAEDAKKAEAA--RKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEakkaeee 1248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 253 -------------------------KSEDVKDDEDEKSEDV-KDDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVEAT 306
Cdd:PTZ00121 1249 rnneeirkfeearmahfarrqaaikAEEARKADELKKAEEKkKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAK 1328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 307 NDDGDTKSEKIETQEKSEEVDAAEESEAESSKEKAEENEST--KVNEDDKSVDVNEKSGENVKEDSSDADSATKSEVKST 384
Cdd:PTZ00121 1329 KKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAekKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKAD 1408
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 385 EDEIVESEDVKDDELDK--------NESTKKVEEVDSTEISEVVSTEDEKSEDVKEKPDE----NEAQEKPEEVITAEKS 452
Cdd:PTZ00121 1409 ELKKAAAAKKKADEAKKkaeekkkaDEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEakkaDEAKKKAEEAKKADEA 1488
|
330 340 350
....*....|....*....|....*....|
gi 1013918153 453 VEETEEPTEVEKPAETKTEDTPENEESKPA 482
Cdd:PTZ00121 1489 KKKAEEAKKKADEAKKAAEAKKKADEAKKA 1518
|
|
| MSCRAMM_ClfA |
NF033609 |
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial ... |
105-405 |
2.87e-04 |
|
MSCRAMM family adhesin clumping factor ClfA; Clumping factor A is an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules). It is heavily studied in Staphylococcus aureus both for its biological role in adhesion and for its potential for vaccination. Features of the sequence, but also of other MSCRAMM adhesins, include a long run of Ser-Asp dipeptide repeats and a C-terminal cell wall anchoring LPXTG motif.
Pssm-ID: 468110 [Multi-domain] Cd Length: 934 Bit Score: 43.74 E-value: 2.87e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 105 PADTTAVSTAQIELKQENGDAKKEEAEAEAEDKKPESGDGDVDVKEEAAEKAENEDADGKDKENSKGEDEDADEEKAEQK 184
Cdd:NF033609 565 PGSDSGSDSSNSDSGSDSGSDSTSDSGSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSASDSDSDS 644
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 185 TETEESGDKKTEEETADAEGETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEVGKSEDVKDDEDEKSEDVKDDEDEK 264
Cdd:NF033609 645 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 724
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 265 SEDVKDDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVEATNDDGDTKSEKIETQEKSEEVDAAEESEAESSKEKAEEN 344
Cdd:NF033609 725 DSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDSDS 804
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1013918153 345 ESTKVNEDDKSVDVNEKSGENVKEDsSDADSATKSEVKSTEDEIVESEDVKDDELDKNEST 405
Cdd:NF033609 805 DSDSDSDSDSDSDSDSDSDSDSDSD-SDSDSDSDSDSDSDSDSDSDSDSDSDSESDSNSDS 864
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
107-479 |
6.69e-04 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 42.31 E-value: 6.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 107 DTTAVSTAQIELKQENGDAKKEEAEAEAEDKKPESGDGDVDVKEEAAEKAENEDADGKDKENSKGEDEDADEEKAEQKTE 186
Cdd:COG5271 269 DTDDEATDDADGLEAAEDDALDAELTAAQAADPESDDDADDSTLAALEGAAEDTEIATADELAAADDEDDDDSAAEDAAE 348
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 187 TEESGDKKTEEETADAEGETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEVGKSEDVKDDEDEKSEDVKDDEDEKSE 266
Cdd:COG5271 349 EAATAEDSAAEDTQDAEDEAAGEAADESEGADTDAAADEADAAADDSADDEEASADGGTSPTSDTDEEEEEADEDASAGE 428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 267 DVKDDEDEKSEDVKDKLEgSETAETSDDAETTEKPDVEATNDDGDTKSEKIETQEKSEEVDAAEESEAESSKEKAEE--- 343
Cdd:COG5271 429 TEDESTDVTSAEDDIATD-EEADSLADEEEEAEAELDTEEDTESAEEDADGDEATDEDDASDDGDEEEAEEDAEAEAdsd 507
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 344 --NESTKVNEDDKSVDVNEKSGENVKEDSSDADSATKSEVK-------STEDEIVESEDVKDDELDKNESTKKVEEVDST 414
Cdd:COG5271 508 elTAEETSADDGADTDAAADPEDSDEDALEDETEGEENAPGsdqdadeTDEPEATAEEDEPDEAEAETEDATENADADET 587
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1013918153 415 EISEVVSTEDEKSEDVKEKPDENEAQEKPEEVITAEKSVEETEEPTEVEKPAETKTEDTPENEES 479
Cdd:COG5271 588 EESADESEEAEASEDEAAEEEEADDDEADADADGAADEEETEEEAAEDEAAEPETDASEAADEDA 652
|
|
| DNA_pol_phi |
pfam04931 |
DNA polymerase phi; This family includes the fifth essential DNA polymerase in yeast EC:2.7.7. ... |
223-309 |
6.91e-04 |
|
DNA polymerase phi; This family includes the fifth essential DNA polymerase in yeast EC:2.7.7.7. Pol5p is localized exclusively to the nucleolus and binds near or at the enhancer region of rRNA-encoding DNA repeating units.
Pssm-ID: 461488 Cd Length: 765 Bit Score: 42.23 E-value: 6.91e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 223 STKDDEVGKSEDVKDDEVGKSEDVKDDEDEKSEDVKDDEDEKSEDVKDDEDEKSEDVKDKLEGSETA-----ETSDDAET 297
Cdd:pfam04931 624 DARENPEGQQELFEDEDEDEEDDDEEEDDDDEDDEDSEEDDDEDDDDEDEEDDDDEDVDEIDELRAKlaealGEHGDDAD 703
|
90
....*....|..
gi 1013918153 298 TEKPDVEATNDD 309
Cdd:pfam04931 704 DDDSDSDEDMDD 715
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
145-403 |
8.35e-04 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 42.34 E-value: 8.35e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 145 DVDVKEEAAEKAENEDADGKDKENSKGEDEDADEEKAEQKTETEESGDKKTEEETADAEGETQEKSEEVDTKEKSEVEST 224
Cdd:PTZ00108 1133 DLDKFEEALEEQEEVEEKEIAKEQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDK 1212
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 225 KDDEVGKSEDVKDDEVGKSEDVKDDEDEKSEDVKDDEDEKSEDVKDDEDEKSEDVKDKLEGSETAETSDDAETtekpdve 304
Cdd:PTZ00108 1213 PDNKKSNSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSP------- 1285
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 305 ATNDDGDTKSEKIETQEKSEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSATKSEVKST 384
Cdd:PTZ00108 1286 PPPSKRPDGESNGGSKPSSPTKKKVKKRLEGSLAALKKKKKSEKKTARKKKSKTRVKQASASQSSRLLRRPRKKKSDSSS 1365
|
250
....*....|....*....
gi 1013918153 385 EDEIVESEDVKDDELDKNE 403
Cdd:PTZ00108 1366 EDDDDSEVDDSEDEDDEDD 1384
|
|
| PRK05901 |
PRK05901 |
RNA polymerase sigma factor; Provisional |
210-407 |
1.18e-03 |
|
RNA polymerase sigma factor; Provisional
Pssm-ID: 235640 [Multi-domain] Cd Length: 509 Bit Score: 41.52 E-value: 1.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 210 SEEVDTKEKSEVESTKDDEVGKSEDVKDDEVGKSEDVKDDEDEKSEDVKDDEDEKSEDVKDDEDEKSEDVKDKLEGSETA 289
Cdd:PRK05901 2 TTASTKAELAAEEEAKKKLKKLAAKSKSKGFITKEEIKEALESKKKTPEQIDQVLIFLSGMVKDTDDATESDIPKKKTKT 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 290 ETSDDAETTEKPDVEATNDDGDTKSEKIETQEKSEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKED 369
Cdd:PRK05901 82 AAKAAAAKAPAKKKLKDELDSSKKAEKKNALDKDDDLNYVKDIDVLNQADDDDDDDDDDDLDDDDIDDDDDDEDDDEDDD 161
|
170 180 190
....*....|....*....|....*....|....*...
gi 1013918153 370 SSDADSATKSEVKSTEDEIVESEDVKDDELDKNESTKK 407
Cdd:PRK05901 162 DDDVDDEDEEKKEAKELEKLSDDDDFVWDEDDSEALRQ 199
|
|
| PRK05901 |
PRK05901 |
RNA polymerase sigma factor; Provisional |
185-375 |
1.35e-03 |
|
RNA polymerase sigma factor; Provisional
Pssm-ID: 235640 [Multi-domain] Cd Length: 509 Bit Score: 41.13 E-value: 1.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 185 TETEESGDKKTEEETADAEGETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEVGKSEDVKDDEDEKSEDVKDDEDEK 264
Cdd:PRK05901 2 TTASTKAELAAEEEAKKKLKKLAAKSKSKGFITKEEIKEALESKKKTPEQIDQVLIFLSGMVKDTDDATESDIPKKKTKT 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 265 SEDVKDDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVEATNDDGDTKSEKIETQEKSEEVDAAEESEAESSKEKAEEN 344
Cdd:PRK05901 82 AAKAAAAKAPAKKKLKDELDSSKKAEKKNALDKDDDLNYVKDIDVLNQADDDDDDDDDDDLDDDDIDDDDDDEDDDEDDD 161
|
170 180 190
....*....|....*....|....*....|.
gi 1013918153 345 ESTKVNEDDKSVDVNEKSGENVKEDSSDADS 375
Cdd:PRK05901 162 DDDVDDEDEEKKEAKELEKLSDDDDFVWDED 192
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
140-441 |
1.56e-03 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 41.15 E-value: 1.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 140 ESGDGDVDVKEEAAEKAENEDADGKDKENSKGEDEDADEEKAEQKTETEESGDKKTEEETADAEGETQEKSEEVDTKEKS 219
Cdd:COG5271 628 TEEEAAEDEAAEPETDASEAADEDADAETEAEASADESEEEAEDESETSSEDAEEDADAAAAEASDDEEETEEADEDAET 707
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 220 EVESTKDDEVGKSEDVKDDEVGKSEDVKDDEDE--KSEDVKDDEDEKSEDVKDDEDEKSEDVKDKLEGSETAETSDDAET 297
Cdd:COG5271 708 ASEEADAEEADTEADGTAEEAEEAAEEAESADEeaASLPDEADAEEEAEEAEEAEEDDADGLEEALEEEKADAEEAATDE 787
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 298 TEKPDVEATNDDGDTKSEKIETQEKSEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSAT 377
Cdd:COG5271 788 EAEAAAEEKEKVADEDQDTDEDALLDEAEADEEEDLDGEDEETADEALEDIEAGIAEDDEEDDDAAAAKDVDADLDLDAD 867
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1013918153 378 KSEVKSTEDEIVESEDVKDDELDKNESTKKVEEVDSTEISEVVSTEDEKSEDVKEKPDENEAQE 441
Cdd:COG5271 868 LAADEHEAEEAQEAETDADADADAGEADSSGESSAAAEDDDAAEDADSDDGANDEDDDDDAEEE 931
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
117-444 |
2.12e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 40.89 E-value: 2.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 117 ELKQENGDAKKEEAEAEAEDKKPESGDGDVDVKEEAAEKAENEDAD-GKDKENSKGEDEDADEEKAEQKTETEESGDKKT 195
Cdd:PTZ00121 1468 EAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADeAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKK 1547
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 196 EEETADAEgETQEKSEEVDTKEKSEVESTKDDEVGKSEDVKDDEVGKSEDV-KDDEDEKSEDVKDDEDEKSEDVKDDEDE 274
Cdd:PTZ00121 1548 ADELKKAE-ELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVmKLYEEEKKMKAEEAKKAEEAKIKAEELK 1626
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 275 KSEDVKDKLE--GSETAETSDDAETTEKPDVEATNDDGDTKSEKIETQEKSEEVDAAEESEAESSKE-KAEENESTKVNE 351
Cdd:PTZ00121 1627 KAEEEKKKVEqlKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEAlKKEAEEAKKAEE 1706
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 352 DDKSVDVNEKSGENVKEDSSDADSATKSEVKSTEDEIVESEDVKDDELDKNestkKVEEVDSTEISEVVSTEDEKSEDVK 431
Cdd:PTZ00121 1707 LKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKK----KIAHLKKEEEKKAEEIRKEKEAVIE 1782
|
330
....*....|...
gi 1013918153 432 EKPDENEAQEKPE 444
Cdd:PTZ00121 1783 EELDEEDEKRRME 1795
|
|
| PRK05901 |
PRK05901 |
RNA polymerase sigma factor; Provisional |
242-434 |
2.66e-03 |
|
RNA polymerase sigma factor; Provisional
Pssm-ID: 235640 [Multi-domain] Cd Length: 509 Bit Score: 40.36 E-value: 2.66e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 242 KSEDVKDDEDEKSEDVKDDEDEKSEDVKDDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVEATNDDGDTKSEKietqE 321
Cdd:PRK05901 12 AEEEAKKKLKKLAAKSKSKGFITKEEIKEALESKKKTPEQIDQVLIFLSGMVKDTDDATESDIPKKKTKTAAKAA----A 87
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 322 KSEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSATKSEVKSTEDEIVESEDVKDDELDK 401
Cdd:PRK05901 88 AKAPAKKKLKDELDSSKKAEKKNALDKDDDLNYVKDIDVLNQADDDDDDDDDDDLDDDDIDDDDDDEDDDEDDDDDDVDD 167
|
170 180 190
....*....|....*....|....*....|...
gi 1013918153 402 NEStKKVEEVDSTEISEVVSTEDEKSEDVKEKP 434
Cdd:PRK05901 168 EDE-EKKEAKELEKLSDDDDFVWDEDDSEALRQ 199
|
|
| PRK08581 |
PRK08581 |
amidase domain-containing protein; |
226-476 |
3.17e-03 |
|
amidase domain-containing protein;
Pssm-ID: 236304 [Multi-domain] Cd Length: 619 Bit Score: 40.16 E-value: 3.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 226 DDEVGKSEDVKDDEVGKSEDVKDDEDEKSEDVkDDEDEKSEDVKDDEDEKSEDVKD-KLEGSETAETSDDAETTEKPDVE 304
Cdd:PRK08581 29 DPQKDSTAKTTSHDSKKSNDDETSKDTSSKDT-DKADNNNTSNQDNNDKKFSTIDSsTSDSNNIIDFIYKNLPQTNINQL 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 305 ATNDDGDTKSEKIETQEKSEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSATKSEVKST 384
Cdd:PRK08581 108 LTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTS 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 385 EDEIVESEDVKDDELDK-----NESTKKVEEVDSTEISEVV--STEDEKSEDVKEKPDENEAQEKPEEVITAEKSVEE-- 455
Cdd:PRK08581 188 NKQPNSPKPTQPNQSNSqpasdDTANQKSSSKDNQSMSDSAldSILDQYSEDAKKTQKDYASQSKKDKTETSNTKNPQlp 267
|
250 260
....*....|....*....|..
gi 1013918153 456 -TEEPTEVEKPAETKTEDTPEN 476
Cdd:PRK08581 268 tQDELKHKSKPAQSFENDVNQS 289
|
|
| PRK05901 |
PRK05901 |
RNA polymerase sigma factor; Provisional |
193-391 |
4.20e-03 |
|
RNA polymerase sigma factor; Provisional
Pssm-ID: 235640 [Multi-domain] Cd Length: 509 Bit Score: 39.59 E-value: 4.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 193 KKTEEETADAEGETQEKSEEVDTKEKSEVESTKDDEVGKSEdvKDDEVGKSEDVKDDEDEKSEDVKDDEDEKSEDVKDDE 272
Cdd:PRK05901 3 TASTKAELAAEEEAKKKLKKLAAKSKSKGFITKEEIKEALE--SKKKTPEQIDQVLIFLSGMVKDTDDATESDIPKKKTK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 273 DEKSEDVKDKLEGSETAETSDDAETTEKPDVEATNDDGDTKSEKietqEKSEEVDAAEESEAESSKEKAEENESTKVNED 352
Cdd:PRK05901 81 TAAKAAAAKAPAKKKLKDELDSSKKAEKKNALDKDDDLNYVKDI----DVLNQADDDDDDDDDDDLDDDDIDDDDDDEDD 156
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1013918153 353 DKSVDVNE-KSGENVKEDSSDADSATKSEVKSTEDEIVES 391
Cdd:PRK05901 157 DEDDDDDDvDDEDEEKKEAKELEKLSDDDDFVWDEDDSEA 196
|
|
| PLN02967 |
PLN02967 |
kinase |
164-293 |
5.10e-03 |
|
kinase
Pssm-ID: 215521 [Multi-domain] Cd Length: 581 Bit Score: 39.26 E-value: 5.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 164 KDKENSKGEDEDADEEKAEQKTETEES---GDKKTEEETADAEGETQE----KSEEVDTKEKSEVESTKDDEVGKSEDVK 236
Cdd:PLN02967 50 KKIESALAVDEEPDENGAVSKKKPTRSvkrATKKTVVEISEPLEEGSElvvnEDAALDKESKKTPRRTRRKAAAASSDVE 129
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1013918153 237 DDEVGKS-------EDVKDDEDEKSEDVKDDEDEKSEDVKDDEDEKSEDVK-DKLEGSETAETSD 293
Cdd:PLN02967 130 EEKTEKKvrkrrkvKKMDEDVEDQGSESEVSDVEESEFVTSLENESEEELDlEKDDGEDISHTYG 194
|
|
| MDN1 |
COG5271 |
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal ... |
144-449 |
5.96e-03 |
|
Midasin, AAA ATPase with vWA domain, involved in ribosome maturation [Translation, ribosomal structure and biogenesis];
Pssm-ID: 444083 [Multi-domain] Cd Length: 1028 Bit Score: 39.23 E-value: 5.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 144 GDVDVKEEAAEKAENEDADGKDKENSKGEDEDADEEKAEQKTETEESGDKKTEEETADAEGETQEKS--EEVDTKEKSEV 221
Cdd:COG5271 706 ETASEEADAEEADTEADGTAEEAEEAAEEAESADEEAASLPDEADAEEEAEEAEEAEEDDADGLEEAleEEKADAEEAAT 785
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 222 ESTKDDEVGKSEDVKDDEVGKSEDVKDDEDEKS--------------EDVKDDEDEKSEDVKDDEDEKSEDVKDKLEGSE 287
Cdd:COG5271 786 DEEAEAAAEEKEKVADEDQDTDEDALLDEAEADeeedldgedeetadEALEDIEAGIAEDDEEDDDAAAAKDVDADLDLD 865
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 288 TAETSDDAETTEKPDVEATNDDGDTKSEKIETQEKSE-EVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENV 366
Cdd:COG5271 866 ADLAADEHEAEEAQEAETDADADADAGEADSSGESSAaAEDDDAAEDADSDDGANDEDDDDDAEEERKDAEEDELGAAED 945
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 367 KEDSSDADSATKSEVKSTEDEIVESEDVKDDELDKNESTKKVEEVDSTEISEVVSTEDEKSEDVKEKPDENEAQEKPEEV 446
Cdd:COG5271 946 DLDALALDEAGDEESDDAAADDAGDDSLADDDEALADAADDAEADDSELDASESTGEAEGDEDDDELEDGEAAAGEATAD 1025
|
...
gi 1013918153 447 ITA 449
Cdd:COG5271 1026 LAA 1028
|
|
| PTZ00108 |
PTZ00108 |
DNA topoisomerase 2-like protein; Provisional |
164-490 |
5.98e-03 |
|
DNA topoisomerase 2-like protein; Provisional
Pssm-ID: 240271 [Multi-domain] Cd Length: 1388 Bit Score: 39.26 E-value: 5.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 164 KDKENSKGEDEDADEEKAEQKTETEESGDKK---------------TEEETADAEGETQEKSEEVDTKEKSEVESTKDDE 228
Cdd:PTZ00108 1054 KKSEKITAEEEEGAEEDDEADDEDDEEELGAavsydyllsmpiwslTKEKVEKLNAELEKKEKELEKLKNTTPKDMWLED 1133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 229 VGKSEDVKDDEVGKSEDVKDDEDEKSEDVKDDEDE----KSEDVKDDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVE 304
Cdd:PTZ00108 1134 LDKFEEALEEQEEVEEKEIAKEQRLKSKTKGKASKlrkpKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKP 1213
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 305 ATNDDGDTKSEKIEtqEKSEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSATKSEVKST 384
Cdd:PTZ00108 1214 DNKKSNSSGSDQED--DEEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPSKR 1291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 385 EDEivesedvkddelDKNESTKKVEEVDSTEISEVVSTEDEKSEDVKEKPDENEAQEKPEEVITAEKSVEETEEPteveK 464
Cdd:PTZ00108 1292 PDG------------ESNGGSKPSSPTKKKVKKRLEGSLAALKKKKKSEKKTARKKKSKTRVKQASASQSSRLLR----R 1355
|
330 340
....*....|....*....|....*.
gi 1013918153 465 PAETKTEDTPENEESKPAGENSSSEE 490
Cdd:PTZ00108 1356 PRKKKSDSSSEDDDDSEVDDSEDEDD 1381
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
162-416 |
8.89e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 38.97 E-value: 8.89e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 162 DGKDKENSKGEDEDADEEKAEQKTETEEsgDKKTEEETADAEGETQEKSEEVDTKEKSEVEstKDDEVGKSEDVKDDEVG 241
Cdd:PTZ00121 1658 ENKIKAAEEAKKAEEDKKKAEEAKKAEE--DEKKAAEALKKEAEEAKKAEELKKKEAEEKK--KAEELKKAEEENKIKAE 1733
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 242 KSEDVKDDEDEKSEDVKDDEDEKSEDVK-DDEDEKSEDVKDKLEGSETAETSDDAETTEKPDVEATNDDGDTKSEKI--- 317
Cdd:PTZ00121 1734 EAKKEAEEDKKKAEEAKKDEEEKKKIAHlKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIieg 1813
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 318 --------------ETQEKSEEVDAAEESEAESSKEKAEENESTKVNEDDKSVDVNEKSGENVKEDSSDADSATKSEVKS 383
Cdd:PTZ00121 1814 gkegnlvindskemEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEKI 1893
|
250 260 270 280
....*....|....*....|....*....|....*....|...
gi 1013918153 384 TEDEIV----------ESEDVKDDELDKNESTKKVEEVDSTEI 416
Cdd:PTZ00121 1894 DKDDIEreipnnnmagKNNDIIDDKLDKDEYIKRDAEETREEI 1936
|
|
| CobT2 |
COG4547 |
Cobalamin biosynthesis cobaltochelatase CobT subunit [Coenzyme transport and metabolism]; ... |
217-327 |
9.48e-03 |
|
Cobalamin biosynthesis cobaltochelatase CobT subunit [Coenzyme transport and metabolism]; Cobalamin biosynthesis cobaltochelatase CobT subunit is part of the Pathway/BioSystem: Cobalamine/B12 biosynthesis
Pssm-ID: 443611 [Multi-domain] Cd Length: 608 Bit Score: 38.62 E-value: 9.48e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1013918153 217 EKSEVESTKDDEVGKSEDVKDDEVGKSEDVKDDEDEKSEDvkDDEDEKSEDVKDDEDEKSEDVKDKLEGSETAETSDDAE 296
Cdd:COG4547 210 ELGEDEDEEDEDDEDDSGEQEEDEEDGEDEDEESDEGAEA--EDAEASGDDAEEGESEAAEAESDEMAEEAEGEDSEEPG 287
|
90 100 110
....*....|....*....|....*....|.
gi 1013918153 297 TTEKPDVEATNDDGDtKSEKIETQEKSEEVD 327
Cdd:COG4547 288 EPWRPNAPPPDDPAD-PDYKVFTTAFDEVVA 317
|
|
| |
