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Conserved domains on  [gi|1034609785|ref|XP_016882870|]
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zinc finger protein 527 isoform X4 [Homo sapiens]

Protein Classification

C2H2-type zinc finger protein( domain architecture ID 11473154)

Cys2His2 (C2H2)-type zinc finger protein may be involved in transcriptional regulation

CATH:  3.30.160.60
Gene Ontology:  GO:0008270|GO:0003677
PubMed:  11361095|22803940|11179890|12665246|10940247
SCOP:  4003583

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
264-426 9.05e-10

FOG: Zn-finger [General function prediction only];


:

Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 60.86  E-value: 9.05e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 264 KPYECKECNKAFRQSAHLAQHQR--IHTGE--KPFACNE--CGKAFSRYAFLVEHQRIHTGEKPYECK--ECNKAFRQSA 335
Cdd:COG5048   288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKllNSSSKFSPLL 367

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 336 HLNQHQRIH-----TGEKPYEC--NQCGKAFSRRIALTLHQRIHTGEKP--FKCSECGKTFGYRSHLNQHQRIHTGEKPY 406
Cdd:COG5048   368 NNEPPQSLQqykdlKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447

                         170       180
                  ....*....|....*....|
gi 1034609785 407 ECIKCGKFFRTDSqLNRHHR 426
Cdd:COG5048   448 LCSILKSFRRDLD-LSNHGK 466
zf-H2C2_2 pfam13465
Zinc-finger double domain;
476-499 1.99e-04

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.51  E-value: 1.99e-04
                          10        20
                  ....*....|....*....|....
gi 1034609785 476 YLNQHQRIHTGEKPYECSECGKAF 499
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSF 24
zf-H2C2_2 pfam13465
Zinc-finger double domain;
421-444 9.27e-04

Zinc-finger double domain;


:

Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 9.27e-04
                          10        20
                  ....*....|....*....|....
gi 1034609785 421 LNRHHRIHTGERPFECSKCGKAFS 444
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFK 25
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
264-426 9.05e-10

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 60.86  E-value: 9.05e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 264 KPYECKECNKAFRQSAHLAQHQR--IHTGE--KPFACNE--CGKAFSRYAFLVEHQRIHTGEKPYECK--ECNKAFRQSA 335
Cdd:COG5048   288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKllNSSSKFSPLL 367

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 336 HLNQHQRIH-----TGEKPYEC--NQCGKAFSRRIALTLHQRIHTGEKP--FKCSECGKTFGYRSHLNQHQRIHTGEKPY 406
Cdd:COG5048   368 NNEPPQSLQqykdlKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447

                         170       180
                  ....*....|....*....|
gi 1034609785 407 ECIKCGKFFRTDSqLNRHHR 426
Cdd:COG5048   448 LCSILKSFRRDLD-LSNHGK 466
zf-H2C2_2 pfam13465
Zinc-finger double domain;
336-361 6.24e-05

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 40.05  E-value: 6.24e-05
                          10        20
                  ....*....|....*....|....*.
gi 1034609785 336 HLNQHQRIHTGEKPYECNQCGKAFSR 361
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
476-499 1.99e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.51  E-value: 1.99e-04
                          10        20
                  ....*....|....*....|....
gi 1034609785 476 YLNQHQRIHTGEKPYECSECGKAF 499
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSF 24
zf-H2C2_2 pfam13465
Zinc-finger double domain;
421-444 9.27e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 9.27e-04
                          10        20
                  ....*....|....*....|....
gi 1034609785 421 LNRHHRIHTGERPFECSKCGKAFS 444
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFK 25
 
Name Accession Description Interval E-value
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
264-426 9.05e-10

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 60.86  E-value: 9.05e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 264 KPYECKECNKAFRQSAHLAQHQR--IHTGE--KPFACNE--CGKAFSRYAFLVEHQRIHTGEKPYECK--ECNKAFRQSA 335
Cdd:COG5048   288 LPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISPAKEKllNSSSKFSPLL 367

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 336 HLNQHQRIH-----TGEKPYEC--NQCGKAFSRRIALTLHQRIHTGEKP--FKCSECGKTFGYRSHLNQHQRIHTGEKPY 406
Cdd:COG5048   368 NNEPPQSLQqykdlKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPynCKNPPCSKSFNRHYNLIPHKKIHTNHAPL 447

                         170       180
                  ....*....|....*....|
gi 1034609785 407 ECIKCGKFFRTDSqLNRHHR 426
Cdd:COG5048   448 LCSILKSFRRDLD-LSNHGK 466
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
264-545 2.59e-09

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 59.71  E-value: 2.59e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 264 KPYECKECNKAFRQSAHLAQHQRIHTGEKPFACN--ECGKAFSRYAFLVEHQRIHTGEKP-------------------- 321
Cdd:COG5048    32 RPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSysGCDKSFSRPLELSRHLRTHHNNPSdlnskslplsnskassssls 111

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 322 -------YECKECNKAFRQSAHLNQHQRIHTGEKPYEC------------------------NQCGKAFSRRIALTLHQR 370
Cdd:COG5048   112 ssssnsnDNNLLSSHSLPPSSRDPQLPDLLSISNLRNNplpgnnsssvntpqsnslhpplpaNSLSKDPSSNLSLLISSN 191

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 371 IHTGEKPFKCSECGKTFGYRSHLNQHQRIHTGEKPYECIKCGKFFRTDSQLNRHHRIHTGERPFECSKCGKAF--SDALV 448
Cdd:COG5048   192 VSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSSSASESPRSSlpTASSQ 271

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 449 LIHHKRSHAGE-----KPYECNKCGKAFSCGSYLNQHQR--IHTGE--KPYECSE--CGKAFHQILSLRLHQRIHAGEKP 517
Cdd:COG5048   272 SSSPNESDSSSekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslCGKLFSRNDALKRHILLHTSISP 351

                         330       340       350
                  ....*....|....*....|....*....|
gi 1034609785 518 YKCNECGNNFSCVSAL--RRHQRIHNRETL 545
Cdd:COG5048   352 AKEKLLNSSSKFSPLLnnEPPQSLQQYKDL 381
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
215-476 3.52e-09

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 58.94  E-value: 3.52e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 215 CGDAFSCYSFFTQPQRIHSGEKPYACNDCGKAFSHDFFLSEHQRTHIgEKPYECKECNKAFRQSAHLAQHQRIHTGEKPF 294
Cdd:COG5048   177 SKDPSSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENS-SSSLPLTTNSQLSPKSLLSQSPSSLSSSDSSS 255

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 295 ACNECGKAFSRYAFLVEHQRIHTGE-------KPYECKECNKAFRQSAHLNQHQR--IHTGE--KPYEC--NQCGKAFSR 361
Cdd:COG5048   256 SASESPRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSR 335

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 362 RIALTLHQRIHTGEKPFKC--SECGKTFGYRSHLNQHQRIH-----TGEKPYECI--KCGKFFRTDSQLNRHHRIHTGER 432
Cdd:COG5048   336 NDALKRHILLHTSISPAKEklLNSSSKFSPLLNNEPPQSLQqykdlKNDKKSETLsnSCIRNFKRDSNLSLHIITHLSFR 415

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*.
gi 1034609785 433 P--FECSKCGKAFSDALVLIHHKRSHAGEKPYECNKCGKAFSCGSY 476
Cdd:COG5048   416 PynCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKSFRRDLDL 461
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
181-455 4.01e-07

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 52.78  E-value: 4.01e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 181 PYESHDFSKLLSFHSLFTQHQTTHFGKLPHGYDECGDAFSCYSFFTQPQRIHSGEKPYACNDCGKAFSHDFFLSEHQRTH 260
Cdd:COG5048   170 PLPANSLSKDPSSNLSLLISSNVSTSIPSSSENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLLSQSPSSLS 249

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 261 IGEKPYECKECNKAFRQSAHLAQHQRIHTGE-------KPFACNECGKAFSRYAFLVEHQR--IHTGE--KPYECKE--C 327
Cdd:COG5048   250 SSDSSSSASESPRSSLPTASSQSSSPNESDSssekgfsLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCPYslC 329

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 328 NKAFRQSAHLNQHQRIHTGEKPYEC--NQCGKAFS-----RRIALTLHQRIHTGEKPFKCSE------CGKTFGYRSHLN 394
Cdd:COG5048   330 GKLFSRNDALKRHILLHTSISPAKEklLNSSSKFSpllnnEPPQSLQQYKDLKNDKKSETLSnscirnFKRDSNLSLHII 409

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1034609785 395 QH--QRIHtgekPYECIKCGKFFRTDSQLNRHHRIHTGERPFECSKCGKaFSDALVLIHHKRS 455
Cdd:COG5048   410 THlsFRPY----NCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLCSILKS-FRRDLDLSNHGKD 467
COG5048 COG5048
FOG: Zn-finger [General function prediction only];
163-531 2.59e-06

FOG: Zn-finger [General function prediction only];


Pssm-ID: 227381 [Multi-domain]  Cd Length: 467  Bit Score: 50.08  E-value: 2.59e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 163 FNQSTYLSKDIGIPPGEKPYESHDFSKLLSF---HSLFTQHQTTHFGKLphgYDECGDAFSCYSFFTQPQRIHSGE---K 236
Cdd:COG5048    43 FSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFsrpLELSRHLRTHHNNPS---DLNSKSLPLSNSKASSSSLSSSSSnsnD 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 237 PYACNDCGKAFSHDFFL--SEHQRTHIGEKPYE-CKECNKAFRQSAHLAQ-------------------HQRIHTGEKPF 294
Cdd:COG5048   120 NNLLSSHSLPPSSRDPQlpDLLSISNLRNNPLPgNNSSSVNTPQSNSLHPplpanslskdpssnlslliSSNVSTSIPSS 199

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 295 ACNECGKAFSRYAFLVEHQRIHTGEKPYECKECNKAFRQSA------HLNQHQRIHTGEKPYECNQCGKAFSRRIALTLH 368
Cdd:COG5048   200 SENSPLSSSYSIPSSSSDQNLENSSSSLPLTTNSQLSPKSLlsqspsSLSSSDSSSSASESPRSSLPTASSQSSSPNESD 279

                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 369 QRIHTG-EKPFKCSECGKTFGYRSHLNQHQR--IHTGE--KPYEC--IKCGKFFRTDSQLNRHHRIHTGERPFEC--SKC 439
Cdd:COG5048   280 SSSEKGfSLPIKSKQCNISFSRSSPLTRHLRsvNHSGEslKPFSCpySLCGKLFSRNDALKRHILLHTSISPAKEklLNS 359

                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1034609785 440 GKAFSDALV-----LIHHKRSHAGEKPYEC--NKCGKAFSCGSYLNQHQRIHTGEKPYEC--SECGKAFHQILSLRLHQR 510
Cdd:COG5048   360 SSKFSPLLNneppqSLQQYKDLKNDKKSETlsNSCIRNFKRDSNLSLHIITHLSFRPYNCknPPCSKSFNRHYNLIPHKK 439

                         410       420
                  ....*....|....*....|.
gi 1034609785 511 IHAGEKPYKCNECGNNFSCVS 531
Cdd:COG5048   440 IHTNHAPLLCSILKSFRRDLD 460
zf-H2C2_2 pfam13465
Zinc-finger double domain;
336-361 6.24e-05

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 40.05  E-value: 6.24e-05
                          10        20
                  ....*....|....*....|....*.
gi 1034609785 336 HLNQHQRIHTGEKPYECNQCGKAFSR 361
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
280-305 1.58e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.89  E-value: 1.58e-04
                          10        20
                  ....*....|....*....|....*.
gi 1034609785 280 HLAQHQRIHTGEKPFACNECGKAFSR 305
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
476-499 1.99e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.51  E-value: 1.99e-04
                          10        20
                  ....*....|....*....|....
gi 1034609785 476 YLNQHQRIHTGEKPYECSECGKAF 499
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSF 24
zf-H2C2_2 pfam13465
Zinc-finger double domain;
392-417 2.74e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 38.12  E-value: 2.74e-04
                          10        20
                  ....*....|....*....|....*.
gi 1034609785 392 HLNQHQRIHTGEKPYECIKCGKFFRT 417
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
421-444 9.27e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 9.27e-04
                          10        20
                  ....*....|....*....|....
gi 1034609785 421 LNRHHRIHTGERPFECSKCGKAFS 444
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFK 25
zf-H2C2_2 pfam13465
Zinc-finger double domain;
309-333 9.45e-04

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 9.45e-04
                          10        20
                  ....*....|....*....|....*
gi 1034609785 309 LVEHQRIHTGEKPYECKECNKAFRQ 333
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-H2C2_2 pfam13465
Zinc-finger double domain;
364-387 1.16e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 36.58  E-value: 1.16e-03
                          10        20
                  ....*....|....*....|....
gi 1034609785 364 ALTLHQRIHTGEKPFKCSECGKTF 387
Cdd:pfam13465   1 NLKRHMRTHTGEKPYKCPECGKSF 24
zf-H2C2_2 pfam13465
Zinc-finger double domain;
253-277 2.29e-03

Zinc-finger double domain;


Pssm-ID: 463886 [Multi-domain]  Cd Length: 26  Bit Score: 35.42  E-value: 2.29e-03
                          10        20
                  ....*....|....*....|....*
gi 1034609785 253 LSEHQRTHIGEKPYECKECNKAFRQ 277
Cdd:pfam13465   2 LKRHMRTHTGEKPYKCPECGKSFKS 26
zf-C2H2 pfam00096
Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two ...
 378-400 5.62e-03

Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter.


Pssm-ID: 395048 [Multi-domain]  Cd Length: 23  Bit Score: 34.58  E-value: 5.62e-03
                          10        20
                  ....*....|....*....|...
gi 1034609785 378 FKCSECGKTFGYRSHLNQHQRIH 400
Cdd:pfam00096   1 YKCPDCGKSFSRKSNLKRHLRTH 23
zf-C2H2 pfam00096
Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two ...
 322-344 6.64e-03

Zinc finger, C2H2 type; The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter.


Pssm-ID: 395048 [Multi-domain]  Cd Length: 23  Bit Score: 34.20  E-value: 6.64e-03
                          10        20
                  ....*....|....*....|...
gi 1034609785 322 YECKECNKAFRQSAHLNQHQRIH 344
Cdd:pfam00096   1 YKCPDCGKSFSRKSNLKRHLRTH 23
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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