|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00419 |
PTZ00419 |
valyl-tRNA synthetase-like protein; Provisional |
1-895 |
0e+00 |
|
valyl-tRNA synthetase-like protein; Provisional
Pssm-ID: 240411 [Multi-domain] Cd Length: 995 Bit Score: 1291.89 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 1 MRGETTLWNPGCDHAGIATQVVVEKKLWKERGLNRHQLGREAFLEEVWKWKAEKGDRIYHQLKKLGSSLDWDRACFTMDP 80
Cdd:PTZ00419 95 MKGDETLWVPGTDHAGIATQVVVEKKLMKEENKTRHDLGREEFLKKVWEWKDKHGNNICNQLRRLGSSLDWSREVFTMDE 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 81 KLSATVTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDKKELTGRTLLPVPGYKEKVEFGVLVSFAYKVQGSDsDE 160
Cdd:PTZ00419 175 QRSKAVKEAFVRLYEDGLIYRDTRLVNWCCYLKTAISDIEVEFEEIEKPTKITIPGYDKKVEVGVLWHFAYPLEDSG-QE 253
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 161 EVVVATTRIETMLGDVAVAVHPKDPRYQHLKGKCVVHPFLS-RSLPIVFDD-FVDMEFGTGAVKITPAHDQNDYEVGQRH 238
Cdd:PTZ00419 254 EIVVATTRIETMLGDVAVAVHPKDERYKKLHGKELIHPFIPdRKIPIIADDeLVDMEFGTGAVKITPAHDPNDYEIAKRH 333
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 239 RLEAISIMDSKGALINVPPPFLGLPRFEARKAVLAALKERGLFRGVKDNPMVVPLCNRSKDVVEPLLRPQWYVRCGEMAQ 318
Cdd:PTZ00419 334 NLPFINIFTLDGKINENGGEFAGMHRFDCRRKIEEELKEMGLLRDKVPNPMRLPRCSRSGDIVEPMLIPQWYVNCKDMAK 413
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 319 AASAAVTRGDLRILPEAHQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITVHD-PAVPPGEDPdgryWVSGRTEAEAREK 397
Cdd:PTZ00419 414 RAVEAVRNGELKIIPSSHENVWYHWLENIQDWCISRQLWWGHRIPAYRVISKGpETDPSDEEP----WVVARSEEEALEK 489
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 398 AAREFGVSPDKISLQQDEDVLDTWFSSGLFPFSIFGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGKLPF 477
Cdd:PTZ00419 490 AKKKFGLSEEDFELEQDEDVLDTWFSSGLFPFSTLGWPDQTDDLQRFFPTSLLETGSDILFFWVARMVMMSLHLTDKLPF 569
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 478 REVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLYDQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDALRFGL 557
Cdd:PTZ00419 570 KTVFLHAMVRDSQGEKMSKSKGNVIDPLEVIEGISLQDLNQKLYEGNLPEKEIKRAIELQKKEFPNGIPECGTDALRFGL 649
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 558 CAYTSQGRDINLDVNRILGYRHFCNKLWNATKFALRGLGKGFVP--SATSKPEGHESL--VDRWIRSRLTEAVRLSNEGF 633
Cdd:PTZ00419 650 LAYTQQGRNINLDINRVVGYRHFCNKLWNAVKFALMKLLKDFNLpnSTLFKPNNVESLpwEDKWILHRLNVAIKEVTEGF 729
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 634 QAYDFPAITTAQYSFWLYELCDVYLECLKPVLN-GVDQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRTPK 712
Cdd:PTZ00419 730 KEYDFSEATQATYNFWLYELCDVYLELIKPRLSkQSDGERKQHAQDVLHTVLDIGLRLLHPMMPFITEELYQRLPNYLRK 809
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 713 APaSLCVTPYPEPSeCSWKDPEAEAALELALSITRAVRSLRADYNLT-RTRPDCFLEVADEATGALASAVSGYVQALASA 791
Cdd:PTZ00419 810 SE-SISIAKYPQPN-PGWNNEALDEEMKIIMSIVKSIRSLIATLGIPnKTKPDCYVTAKDAELIELIESAENLISTLAKI 887
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 792 G---VVAVLALGAPAPQGCAVAVASDRCSIHLQLQGLVDPARELGKLQAKRSEAQRQAQRLQERRAASSYSAKVPLEVQE 868
Cdd:PTZ00419 888 GsvsVIPPIEEEAEVPKGCGFDVVDNKVIIYLNLDEFIDLKKELAKLEKKLAKLQKSLESYLKKISIPNYEDKVPEDVRK 967
|
890 900
....*....|....*....|....*..
gi 1039753239 869 ADEAKLQQTEAELRKVDEAIALFQKML 895
Cdd:PTZ00419 968 LNDEKIDELNEEIKQLEQAIEELKSLL 994
|
|
| ValS |
COG0525 |
Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Valyl-tRNA synthetase ... |
1-889 |
0e+00 |
|
Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Valyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 440291 [Multi-domain] Cd Length: 877 Bit Score: 1083.54 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 1 MRGETTLWNPGCDHAGIATQVVVEKKLwKERGLNRHQLGREAFLEEVWKWKAEKGDRIYHQLKKLGSSLDWDRACFTMDP 80
Cdd:COG0525 70 MQGYNTLWQPGTDHAGIATQAVVERQL-AEEGKSRHDLGREKFLERVWEWKEESGGTITNQLRRLGASCDWSRERFTMDE 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 81 KLSATVTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDkkeltgrtllpvpgYKEKVefGVLVSFAYKVqgSDSDE 160
Cdd:COG0525 149 GLSKAVREVFVRLYEKGLIYRGKRLVNWDPKLKTALSDLEVE--------------HEEVK--GHLWHIRYPL--ADGSG 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 161 EVVVATTRIETMLGDVAVAVHPKDPRYQHLKGKCVVHPFLSRSLPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHRL 240
Cdd:COG0525 211 YIVVATTRPETMLGDTAVAVHPEDERYKHLIGKTVILPLVGREIPIIADEYVDPEFGTGAVKITPAHDPNDFEVGKRHNL 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 241 EAISIMDSKGALINVPPPFLGLPRFEARKAVLAALKERGLFRGVKDNPMVVPLCNRSKDVVEPLLRPQWYVRCGEMAQAA 320
Cdd:COG0525 291 PMINILDEDGTINENAGKYRGLDRFEARKAIVADLEELGLLVKVEPHKHSVGHSDRSGTVIEPYLSDQWFVKMKPLAKPA 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 321 SAAVTRGDLRILPEAHQRTWHSWMDNIRDWCISRQLWWGHRIPAYFitvhdpavppgeDPDGRYWVSgRTEAEAREKAar 400
Cdd:COG0525 371 IEAVEDGEIKFVPERWEKTYFHWMENIRDWCISRQLWWGHRIPAWY------------CPDGEVYVA-RTEPEACAKA-- 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 401 efgvspDKISLQQDEDVLDTWFSSGLFPFSIFGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGKLPFREV 480
Cdd:COG0525 436 ------GSVNLTQDEDVLDTWFSSALWPFSTLGWPEKTEDLKYFYPTSVLVTGFDIIFFWVARMIMMGLHFTGEVPFKDV 509
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 481 YLHAIVRDAHGRKMSKSLGNVIDPLDVIhgvslqglyDQLlnsnldpsevekakegqkadfpagipecGTDALRFGLCAY 560
Cdd:COG0525 510 YIHGLVRDEQGRKMSKSKGNVIDPLDLI---------DKY----------------------------GADALRFTLAAL 552
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 561 TSQGRDINLDVNRILGYRHFCNKLWNATKFALrGLGKGFVPSATSKPEgHESLVDRWIRSRLTEAVRLSNEGFQAYDFPA 640
Cdd:COG0525 553 ASPGRDIKFDEERVEGYRNFANKLWNASRFVL-MNLEGFDPGLDPDPE-ELSLADRWILSRLNKTIAEVTEALEKYRFDE 630
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 641 ITTAQYSF-WlYELCDVYLECLKPVLNGVDQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRtpKAPASLCV 719
Cdd:COG0525 631 AAQALYDFvW-NEFCDWYLELAKPRLYGGDEAAKRETRATLVYVLEQILRLLHPFMPFITEEIWQKLPPR--KEGESIML 707
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 720 TPYPEPSEcSWKDPEAEAALELALSITRAVRSLRADYNLT-RTRPDCFLEVADEATGALASAVSGYVQALASAGVVAVLA 798
Cdd:COG0525 708 APWPEADE-ELIDEEAEAEFEWLKEVISAIRNIRAEMNIPpSKKLPLLLKGADEADRARLEENAAYIKRLARLEEITILV 786
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 799 lgAPAPQGCAVAVASDrCSIHLQLQGLVDPARELGKLQAKRSEAQRQAQRLQERRAASSYSAKVPLEVQEADEAKLQQTE 878
Cdd:COG0525 787 --DEKPEGAASAVVGG-AEVFLPLEGLIDVEAERARLEKELAKLEKEIARVEKKLSNEGFVAKAPAEVVEKEREKLAEAE 863
|
890
....*....|.
gi 1039753239 879 AELRKVDEAIA 889
Cdd:COG0525 864 AKLEKLEEQLA 874
|
|
| valS |
PRK05729 |
valyl-tRNA synthetase; Reviewed |
1-893 |
0e+00 |
|
valyl-tRNA synthetase; Reviewed
Pssm-ID: 235582 [Multi-domain] Cd Length: 874 Bit Score: 1050.47 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 1 MRGETTLWNPGCDHAGIATQVVVEKKLWKErGLNRHQLGREAFLEEVWKWKAEKGDRIYHQLKKLGSSLDWDRACFTMDP 80
Cdd:PRK05729 71 MQGYNTLWLPGTDHAGIATQMVVERQLAAE-GKSRHDLGREKFLEKVWEWKEESGGTITNQLRRLGASCDWSRERFTMDE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 81 KLSATVTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDkkeltgrtllpvpgYKEkVEfGVLVSFAYKVqgSDSDE 160
Cdd:PRK05729 150 GLSKAVREVFVRLYEKGLIYRGKRLVNWDPKLQTALSDLEVE--------------YKE-VK-GKLWHIRYPL--ADGSD 211
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 161 EVVVATTRIETMLGDVAVAVHPKDPRYQHLKGKCVVHPFLSRSLPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHRL 240
Cdd:PRK05729 212 YLVVATTRPETMLGDTAVAVNPEDERYKHLIGKTVILPLVGREIPIIADEYVDPEFGTGAVKITPAHDPNDFEVGKRHNL 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 241 EAISIMDSKGALINVPPPFLGLPRFEARKAVLAALKERGLFRGVKDNPMVVPLCNRSKDVVEPLLRPQWYVRCGEMAQAA 320
Cdd:PRK05729 292 PMINIMDEDGTINENPGEYQGLDRFEARKAIVADLEELGLLVKIEPHTHSVGHSDRSGVVIEPYLSDQWFVKMKPLAKPA 371
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 321 SAAVTRGDLRILPEAHQRTWHSWMDNIRDWCISRQLWWGHRIPAYFitvhdpavppgeDPDGRYWVsGRTEAEAREKAAr 400
Cdd:PRK05729 372 LEAVENGEIKFVPERWEKTYFHWMENIQDWCISRQLWWGHRIPAWY------------DEDGEVYV-GREEPEAREKAL- 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 401 efgvspdkisLQQDEDVLDTWFSSGLFPFSIFGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGKLPFREV 480
Cdd:PRK05729 438 ----------LTQDEDVLDTWFSSALWPFSTLGWPEKTEDLKRFYPTSVLVTGFDIIFFWVARMIMMGLHFTGQVPFKDV 507
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 481 YLHAIVRDAHGRKMSKSLGNVIDPLDVIhgvslqglyDQLlnsnldpsevekakegqkadfpagipecGTDALRFGLCAY 560
Cdd:PRK05729 508 YIHGLVRDEQGRKMSKSKGNVIDPLDLI---------DKY----------------------------GADALRFTLAAL 550
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 561 TSQGRDINLDVNRILGYRHFCNKLWNATKFALrgLGKGFVPSATSKPEGHESLVDRWIRSRLTEAVRLSNEGFQAYDFPA 640
Cdd:PRK05729 551 ASPGRDIRFDEERVEGYRNFANKLWNASRFVL--MNLEGADVGELPDPEELSLADRWILSRLNRTVAEVTEALDKYRFDE 628
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 641 ITTAQYSFWLYELCDVYLECLKPVLNGVDQVAaecARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRTPKapASLCVT 720
Cdd:PRK05729 629 AARALYEFIWNEFCDWYLELAKPVLQEAAKRA---TRATLAYVLEQILRLLHPFMPFITEELWQKLAPLGIE--ESIMLA 703
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 721 PYPEPSECswKDPEAEAALELALSITRAVRSLRADYNLT-RTRPDCFLEVADEATGALASAVSGYVQALASAGVVAVLAL 799
Cdd:PRK05729 704 PWPEADEA--IDEAAEAEFEWLKELITAIRNIRAEMNIPpSKKLPLLLKGADAEDRARLEANEAYIKRLARLESLEILAD 781
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 800 GAPAPQGCAVAVASDrCSIHLQLQGLVDPARELGKLQAKRSEAQRQAQRLQERRAASSYSAKVPLEVQEADEAKLQQTEA 879
Cdd:PRK05729 782 DEEAPEGAASAVVGG-AELFLPLEGLIDVEAELARLEKELAKLEKEIERVEKKLSNEGFVAKAPEEVVEKEREKLAEYEE 860
|
890
....*....|....
gi 1039753239 880 ELRKVDEAIALFQK 893
Cdd:PRK05729 861 KLAKLKERLARLKA 874
|
|
| PLN02381 |
PLN02381 |
valyl-tRNA synthetase |
1-887 |
0e+00 |
|
valyl-tRNA synthetase
Pssm-ID: 215214 [Multi-domain] Cd Length: 1066 Bit Score: 1037.16 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 1 MRGETTLWNPGCDHAGIATQVVVEKKLWKERGLNRHQLGREAFLEEVWKWKAEKGDRIYHQLKKLGSSLDWDRACFTMDP 80
Cdd:PLN02381 163 MSGYNALWVPGVDHAGIATQVVVEKKLMRERHLTRHDIGREEFVSEVWKWKDEYGGTILNQLRRLGASLDWSRECFTMDE 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 81 KLSATVTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDKKELTGRTLLPVPGYKEKVEFGVLVSFAYKVQGSDSde 160
Cdd:PLN02381 243 QRSKAVTEAFVRLYKEGLIYRDIRLVNWDCTLRTAISDVEVDYIDIKERTLLKVPGYDKPVEFGVLTSFAYPLEGGLG-- 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 161 EVVVATTRIETMLGDVAVAVHPKDPRYQHLKGKCVVHPFLSRSLPIVFD-DFVDMEFGTGAVKITPAHDQNDYEVGQRHR 239
Cdd:PLN02381 321 EIVVATTRIETMLGDTAIAIHPDDERYKHLHGKFAVHPFNGRKLPIICDaILVDPNFGTGAVKITPAHDPNDFEVGKRHN 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 240 LEAISIMDSKGAL-INVPPPFLGLPRFEARKAVLAALKERGLFRGVKDNPMVVPLCNRSKDVVEPLLRPQWYVRCGEMAQ 318
Cdd:PLN02381 401 LEFINIFTDDGKInSNGGSEFAGMPRFAAREAVIEALQKKGLYRGAKNNEMRLGLCSRTNDVVEPMIKPQWFVNCSSMAK 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 319 AASAAVTRGD---LRILPEAHQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITVHDPAvppgEDPDGRY---WVSGRTEA 392
Cdd:PLN02381 481 QALDAAIDGEnkkLEFIPKQYLAEWKRWLENIRDWCISRQLWWGHRIPAWYVTLEDDQ----LKELGSYndhWVVARNES 556
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 393 EAREKAAREFgvSPDKISLQQDEDVLDTWFSSGLFPFSIFGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLT 472
Cdd:PLN02381 557 DALLEASQKF--PGKKFELSQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMMGMQLG 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 473 GKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLYDQLLNSNLDPSEVEKAKEGQKADFPAGIPECGTDA 552
Cdd:PLN02381 635 GDVPFRKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELVVAKEGQKKDFPNGIAECGTDA 714
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 553 LRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNATKFALRGLGKGFVPSATSKPEGHESLVdRWIRSRLTEAVRLSNEG 632
Cdd:PLN02381 715 LRFALVSYTAQSDKINLDILRVVGYRQWCNKLWNAVRFAMSKLGDDYTPPATLSVETMPFSC-KWILSVLNKAISKTVSS 793
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 633 FQAYDFPAITTAQYSFWLYELCDVYLECLKPVLNGVDQ---VAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPR- 708
Cdd:PLN02381 794 LDAYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPefaSERAAAQDTLWICLDTGLRLLHPFMPFVTEELWQRLPQp 873
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 709 RTPKAPASLCVTPYPEPSEcSWKDPEAEAALELALSITRAVRSLRADYNLTRT--RPDCFLEVADEATGALASAVSGYVQ 786
Cdd:PLN02381 874 KDHTRKDSIMISEYPSAVE-AWTNEKVEYEMDLVLSTVKCLRSLRAEVLEKQKneRLPAFALCRNQEIAAIIKSHQLEIL 952
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 787 ALASAGVVAVLALGAPA-PQGCAVAVASDRCSIHLQLQGLVDPARELGKLQAKRSEAQRQAQRLQERRAASSYSAKVPLE 865
Cdd:PLN02381 953 TLANLSSLKVLLSENDApPAGCAFENVNENLKVYLQAQGAVNAEAELEKLRNKMDEIQKQQEKLEKKMNASGYKEKVPAN 1032
|
890 900
....*....|....*....|..
gi 1039753239 866 VQEADEAKLQQTEAELRKVDEA 887
Cdd:PLN02381 1033 IQEEDARKLTKLLQELEFFEKE 1054
|
|
| valS |
TIGR00422 |
valyl-tRNA synthetase; The valyl-tRNA synthetase (ValS) is a class I amino acyl-tRNA ligase ... |
1-874 |
0e+00 |
|
valyl-tRNA synthetase; The valyl-tRNA synthetase (ValS) is a class I amino acyl-tRNA ligase and is particularly closely related to the isoleucyl tRNA synthetase. [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 273070 [Multi-domain] Cd Length: 861 Bit Score: 884.01 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 1 MRGETTLWNPGCDHAGIATQVVVEKKLWKErGLNRHQLGREAFLEEVWKWKAEKGDRIYHQLKKLGSSLDWDRACFTMDP 80
Cdd:TIGR00422 68 MKGYNVLWLPGTDHAGIATQVKVEKKLGAE-GKTKHDLGREEFREKIWEWKEESGGTIKNQIKRLGASLDWSRERFTMDE 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 81 KLSATVTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDKKELTGRtllpVPGYKEKVEFGvlvsfaykvqgsdSDE 160
Cdd:TIGR00422 147 GLSKAVKEAFVRLYEKGLIYRGEYLVNWDPKLNTAISDIEVEYKEVKGK----LYYIRYPLANG-------------SKD 209
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 161 EVVVATTRIETMLGDVAVAVHPKDPRYQHLKGKCVVHPFLSRSLPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHRL 240
Cdd:TIGR00422 210 YLVVATTRPETMFGDTAVAVHPEDERYKHLIGKKVILPLTGRKIPIIADEYVDMEFGTGAVKVTPAHDFNDYEWGKRHNL 289
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 241 EAISIMDSKGALINVPPPFLGLPRFEARKAVLAALKERGLFRGVKDNPMVVPLCNRSKDVVEPLLRPQWYVRCGEMAQAA 320
Cdd:TIGR00422 290 EFINILDEDGLLNENAGKYQGLTRFEARKKIVEDLKEEGLLVKIEPHTHNVGTCWRSGTVVEPLLSKQWFVKVEKLADKA 369
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 321 SAAVTRGDLRILPEAHQRTWHSWMDNIRDWCISRQLWWGHRIPAYFItvhdpavppgeDPDGRYWVsGRTEAEAREKAAR 400
Cdd:TIGR00422 370 LEAAEEGEIKFVPKRMEKRYLNWLRNIKDWCISRQLIWGHRIPVWYC-----------KECGEVYV-AKEEPLPDDKTNT 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 401 EFGVSpdkisLQQDEDVLDTWFSSGLFPFSIFGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGKLPFREV 480
Cdd:TIGR00422 438 GPSVE-----LEQDTDVLDTWFSSSLWPFSTLGWPDETKDLKKFYPTDLLVTGYDIIFFWVARMIFRSLALTGQVPFKEV 512
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 481 YLHAIVRDAHGRKMSKSLGNVIDPLDVIHgvslqglydqllnsnldpsevekakegqkadfpagipECGTDALRFGLCAY 560
Cdd:TIGR00422 513 YIHGLVRDEQGRKMSKSLGNVIDPLDVIE-------------------------------------KYGADALRFTLASL 555
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 561 TSQGRDINLDVNRILGYRHFCNKLWNATKFALRGLGKgfvPSATSKPEGHESLVDRWIRSRLTEAVRLSNEGFQAYDFPA 640
Cdd:TIGR00422 556 VTPGDDINFDWKRVESARNFLNKLWNASRFVLMNLSD---DLELSGGEEKLSLADRWILSKLNRTIKEVRKALDKYRFAE 632
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 641 ITTAQYSFWLYELCDVYLECLKPVLNGVDQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRTpkapASLCVT 720
Cdd:TIGR00422 633 AAKALYEFIWNDFCDWYIELVKYRLYNGNEAEKKAARDTLYYVLDKALRLLHPFMPFITEEIWQHFKEGA----DSIMLQ 708
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 721 PYPEPSEcSWKDPEAEAALELALSITRAVRSLRADYNLTRTRPDCFLEVADEATGALA-SAVSGYVQALASAGVVAVLAl 799
Cdd:TIGR00422 709 SYPVVDA-EFVDEEAEKAFELLKEIIVSIRNLKAESNIPPNAPLKVLLIYTEAETAERlKLNAVDIKGAINFSEVEVVI- 786
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1039753239 800 GAPaPQGCAVAVASDRCSIHLQLQGLVDPARELGKLQAKRSEAQRQAQRLQERRAASSYSAKVPLEVQEADEAKL 874
Cdd:TIGR00422 787 EKP-EVTEAVVELVPGFEIIIPVKGLINKAKELARLQKQLDKEKKEVIRIEGKLENEGFVKKAPKEVIEKEKEKL 860
|
|
| valS |
PRK14900 |
valyl-tRNA synthetase; Provisional |
1-890 |
0e+00 |
|
valyl-tRNA synthetase; Provisional
Pssm-ID: 237855 [Multi-domain] Cd Length: 1052 Bit Score: 788.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 1 MRGETTLWNPGCDHAGIATQVVVEKKLWKERGLNRHQLGREAFLEEVWKWKAEKGDRIYHQLKKLGSSLDWDRACFTMDP 80
Cdd:PRK14900 83 MSGFNTLWLPGTDHAGIATQMIVEKELKKTEKKSRHDLGREAFLERVWAWKEQYGSRIGEQHKALGASLDWQRERFTMDE 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 81 KLSATVTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDKKEltgrtllpvpgykekVEFGVLVSFAYKVqgSDSDE 160
Cdd:PRK14900 163 GLSRAVREVFVRLHEEGLIYREKKLINWCPDCRTALSDLEVEHEE---------------AHQGELWSFAYPL--ADGSG 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 161 EVVVATTRIETMLGDVAVAVHPKDPRYQHLKGKCVVHPFLSRSLPIVFD-DFVDMEFGTGAVKITPAHDQNDYEVGQRHR 239
Cdd:PRK14900 226 EIVVATTRPETMLGDTAVAVHPLDPRYMALHGKKVRHPITGRTFPIVADaILVDPKFGTGAVKVTPAHDFNDFEVGKRHG 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 240 LEAISIMDSKGALINVPPPFLGLPRFEARKAVLAALKERGLFRGVKDNPMVVPLCNRSKDVVEPLLRPQWYVRCGEMAQA 319
Cdd:PRK14900 306 LEMITVIGPDGRMTAEAGPLAGLDRFEARKEVKRLLAEQGLDRGAKPHVLPLGRCQRSATILEPLLSDQWYVRIEPLARP 385
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 320 ASAAVTRGDLRILPEAHQRTWHSWMDNIRDWCISRQLWWGHRIPAYFItvhdpavppgedPDGRYWVSGRTEAEAREKAA 399
Cdd:PRK14900 386 AIEAVEQGRTRFIPEQWTNTYMAWMRNIHDWCISRQLWWGHQIPAWYC------------PDGHVTVARETPEACSTCGK 453
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 400 REFgvspdkislQQDEDVLDTWFSSGLFPFSIFGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGKLPFRE 479
Cdd:PRK14900 454 AEL---------RQDEDVLDTWFSSGLWPFSTMGWPEQTDTLRTFYPTSVMETGHDIIFFWVARMMMMGLHFMGEVPFRT 524
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 480 VYLHAIVRDAHGRKMSKSLGNVIDPLDVihgvslqglydqllnsnldpsevekakegqkadfpagIPECGTDALRFGLCA 559
Cdd:PRK14900 525 VYLHPMVRDEKGQKMSKTKGNVIDPLVI-------------------------------------TEQYGADALRFTLAA 567
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 560 YTSQGRDINLDVNRILGYRHFCNKLWNATKFALRGLGkGFVPSATSKPEGHESLVDRWIRSRLTEAVRLSNEGFQAYDFP 639
Cdd:PRK14900 568 LTAQGRDIKLAKERIEGYRAFANKLWNASRFALMNLS-GYQERGEDPARLARTPADRWILARLQRAVNETVEALEAFRFN 646
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 640 AITTAQYSFWLYELCDVYLECLKPVLNGVDQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLP--RRTPKAPASL 717
Cdd:PRK14900 647 DAANAVYAFVWHELCDWYIELAKEALASEDPEARRSVQAVLVHCLQTSYRLLHPFMPFITEELWHVLRaqVGASAWADSV 726
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 718 CVTPYPEPSECswkDPEAEAALELALSITRAVRSLRADYNLT-----RTRPDCFLEVADEATGALASAVS-GYVQALASA 791
Cdd:PRK14900 727 LAAEYPRKGEA---DEAAEAAFRPVLGIIDAVRNIRGEMGIPwkvklGAQAPVEIAVADPALRDLLQAGElARVHRVAGV 803
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 792 GVVAVLALGAPAPQGCAVAVASDRCSIHLQLQGLVDPARELGKLQAKRSEAQRQAQRLQERRAASSYSAKVPLEVQEADE 871
Cdd:PRK14900 804 EGSRLVVAAATAPAPQSAVGVGPGFEVRVPLAGVIDLAAETARVDKEIGKVDQDLAVLERKLQNPSFVQNAPPAVVEKDR 883
|
890
....*....|....*....
gi 1039753239 872 AKLQQTEAELRKVDEAIAL 890
Cdd:PRK14900 884 ARAEELREKRGKLEAHRAM 902
|
|
| PLN02943 |
PLN02943 |
aminoacyl-tRNA ligase |
1-894 |
0e+00 |
|
aminoacyl-tRNA ligase
Pssm-ID: 215509 [Multi-domain] Cd Length: 958 Bit Score: 655.86 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 1 MRGETTLWNPGCDHAGIATQVVVEKKLWKErGLNRHQLGREAFLEEVWKWKAEKGDRIYHQLKKLGSSLDWDRACFTMDP 80
Cdd:PLN02943 123 MKGRPTLWIPGTDHAGIATQLVVEKMLASE-GIKRTDLGRDEFTKRVWEWKEKYGGTITNQIKRLGASCDWSRERFTLDE 201
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 81 KLSATVTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDKKEltgrtllpvpgykekvEFGVLVSFAYKVQGSdSDE 160
Cdd:PLN02943 202 QLSRAVVEAFVRLHEKGLIYQGSYMVNWSPNLQTAVSDLEVEYSE----------------EPGTLYYIKYRVAGG-SED 264
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 161 EVVVATTRIETMLGDVAVAVHPKDPRYQHLKGKCVVHPF-LSRSLPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHR 239
Cdd:PLN02943 265 FLTIATTRPETLFGDVAIAVNPEDDRYSKYIGKMAIVPMtYGRHVPIIADRYVDKDFGTGVLKISPGHDHNDYLLARKLG 344
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 240 LEAISIMDSKGALINVPppflGLPRFEARKAVLAALKERGLfrGVKDNP--MVVPLCNRSKDVVEPLLRPQWYVRCGEMA 317
Cdd:PLN02943 345 LPILNVMNKDGTLNEVA----GLYWFEAREKLWSDLEETGL--AVKKEPhtLRVPRSQRGGEVIEPLVSKQWFVTMEPLA 418
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 318 QAASAAVTRGDLRILPEAHQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITvhdpavppGEDPDGRYWVSgRTEAEAREK 397
Cdd:PLN02943 419 EKALKAVENGELTIIPERFEKIYNHWLSNIKDWCISRQLWWGHRIPVWYIV--------GKDCEEDYIVA-RSAEEALEK 489
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 398 AAREFGVSpdkISLQQDEDVLDTWFSSGLFPFSIFGWPNQS-EDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGKLP 476
Cdd:PLN02943 490 AREKYGKD---VEIYQDPDVLDTWFSSALWPFSTLGWPDVSaEDFKKFYPTTVLETGHDILFFWVARMVMMGIEFTGTVP 566
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 477 FREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHgvslqglydqllnsnldpsevekakegqkadfpagipECGTDALRFG 556
Cdd:PLN02943 567 FSYVYLHGLIRDSQGRKMSKTLGNVIDPLDTIK-------------------------------------EFGTDALRFT 609
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 557 LCAYTSqGRDINLDVNRILGYRHFCNKLWNATKFALRGLGKGFVPSA-----TSKPEGHESLV-----DRWIRSRLTEAV 626
Cdd:PLN02943 610 LALGTA-GQDLNLSTERLTSNKAFTNKLWNAGKFVLQNLPSQSDTSAwehilACKFDKEESLLslplpECWVVSKLHELI 688
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 627 RLSNEGFQAYDFPAITTAQYSFWLYELCDVYLECLKPVLNGV-DQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQR 705
Cdd:PLN02943 689 DSVTTSYDKYFFGDVGREIYDFFWSDFADWYIEASKTRLYHSgDNSALSRAQAVLLYVFENILKLLHPFMPFVTEELWQA 768
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 706 LPRRTpkapASLCVTPYPEPSECswKDPEAEAALELALSITRAVRSLRADYNLTRTRPDCFLEVADEATGALASAVSGYV 785
Cdd:PLN02943 769 LPYRK----EALIVSPWPQTSLP--KDLKSIKRFENLQSLTRAIRNARAEYSVEPAKRISASIVASAEVIEYISKEKEVL 842
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 786 QALASAGVVAVLALGAP---APQGCAVaVASDRCSIHLQLQGLVDPARELGKLQAKRSEAQRQAQRLQERRAASSYSAKV 862
Cdd:PLN02943 843 ALLSRLDLQNVHFTDSPpgdANQSVHL-VASEGLEAYLPLADMVDISAEVERLSKRLSKMQTEYDALAARLSSPKFVEKA 921
|
890 900 910
....*....|....*....|....*....|..
gi 1039753239 863 PLEVQEADEAKLQQTEAELRKVDEAIALFQKM 894
Cdd:PLN02943 922 PEDVVRGVREKAAEAEEKIKLTKNRLAFLKST 953
|
|
| tRNA-synt_1 |
pfam00133 |
tRNA synthetases class I (I, L, M and V); Other tRNA synthetase sub-families are too ... |
1-570 |
0e+00 |
|
tRNA synthetases class I (I, L, M and V); Other tRNA synthetase sub-families are too dissimilar to be included.
Pssm-ID: 459685 [Multi-domain] Cd Length: 602 Bit Score: 614.42 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 1 MRGETTLWNPGCDHAGIATQVVVEKKLWKERGLNRHQLGREAFLEEVWKWKAEKGDRIYHQLKKLGSSLDWDRACFTMDP 80
Cdd:pfam00133 58 MKGYYVLWVPGWDHHGLPTEQVVEKKLGIKEKKTRHKYGREEFREKCREWKMEYADEIRKQFRRLGRSIDWDREYFTMDP 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 81 KLSATVTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDKKELTgrtllpvpgykekvefGVLVSFAYKVQGsDSDE 160
Cdd:pfam00133 138 ELEAAVWEVFVRLHDKGLIYRGKKLVNWSPALNTALSNLEVEYKDVK----------------GPSIHVAFPLAD-DEGA 200
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 161 EVVVATTRIETMLGDVAVAVHP-------------------------------KDPRYQHLKGKCVVHPFLSRSLPIVFD 209
Cdd:pfam00133 201 SLVIWTTTPWTLPGNTAVAVNPefdyvitgegyilaeallkslykkgtdkkilEDFRGKELEGKEAIHPFVNREIPIITD 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 210 DFVDMEFGTGAVKITPAHDQNDYEVGQRHRLEAISIMDSKGALINVPPPFLGLPRFEARKAVLAALKERGLFRGVKDNPM 289
Cdd:pfam00133 281 DYVDMEFGTGAVHIAPAHGENDYEVGQRHNLEVINPVDDDGTFTEEAPDFQGVYRFDARKKIVELLTEKGLLLKIEPFTH 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 290 VVPLCNRSKDVVEPLLRPQWYVRCGEMAQAASAAVTrgDLRILPEAHQRTWHSWMDNIRDWCISRQLWWGHRIPAYFITV 369
Cdd:pfam00133 361 SYPFCWRSGTPIIPRATPQWFVRMDELADQALEAVE--KVQFVPKSGEKRYFNWLANIQDWCISRQRWWGHPIPAWVSKD 438
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 370 HDPAVPPGEdpdGRYWVSGRTEAEAREKA-AREFG--VSPDKISLQQDEDVLDTWFSSGLFPFSIFGWPNQS-EDLSVFY 445
Cdd:pfam00133 439 TEEVVCRGE---LFELVAGRFEEEGSIKWlHREAKdkLGYGKGTLEQDEDVLDTWFSSGSWPFSTLGWPFVNtEEFKKFF 515
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 446 PGTLLETGHDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHgvslqglydqllnsnl 525
Cdd:pfam00133 516 PADMLLEGSDQTRGWFYRMIMLSTALTGSVPFKNVLVHGLVRDEQGRKMSKSLGNVIDPLDVID---------------- 579
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 1039753239 526 dpsevekakegqkadfpagipECGTDALRFGLCaYTSQGRDINLD 570
Cdd:pfam00133 580 ---------------------KYGADALRLWLA-NSDYGRDINLS 602
|
|
| ValRS_core |
cd00817 |
catalytic core domain of valyl-tRNA synthetases; Valine amino-acyl tRNA synthetase (ValRS) ... |
1-569 |
0e+00 |
|
catalytic core domain of valyl-tRNA synthetases; Valine amino-acyl tRNA synthetase (ValRS) catalytic core domain. This enzyme is a monomer which aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. ValRS has an insertion in the core domain, which is subject to both deletions and rearrangements. This editing region hydrolyzes mischarged cognate tRNAs and thus prevents the incorporation of chemically similar amino acids.
Pssm-ID: 185677 [Multi-domain] Cd Length: 382 Bit Score: 542.99 E-value: 0e+00
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 1 MRGETTLWNPGCDHAGIATQVVVEKKLWKERGlNRHQLGREAFLEEVWKWKAEKGDRIYHQLKKLGSSLDWDRACFTMDP 80
Cdd:cd00817 36 MKGYNVLWPPGTDHAGIATQVVVEKKLGIEGK-TRHDLGREEFLEKCWEWKEESGGKIREQLKRLGASVDWSREYFTMDP 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 81 KLSATVTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVdkkeltgrtllpvpgykekvefgvlvsfaykvqgsdsde 160
Cdd:cd00817 115 GLSRAVQEAFVRLYEKGLIYRDNRLVNWCPKLRTAISDIEV--------------------------------------- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 161 evvvattrietmlgdvavavhpkdpryqhlkgkcvvhpflsrslpivfddfvdmefgtgavkitpahdqndyevgqrhrl 240
Cdd:cd00817 --------------------------------------------------------------------------------
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 241 eaisimdskgalinvpppflglprfearkavlaalkerglfrgvkdnpmvvplCNRSKDVVEPLLRPQWYVRCGEMAQAA 320
Cdd:cd00817 156 -----------------------------------------------------CSRSGDVIEPLLKPQWFVKVKDLAKKA 182
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 321 SAAVTRGDLRILPEAHQRTWHSWMDNIRDWCISRQLWWGHRIPAYFItvhdpavppgedPDGRYWVSGRTEAEAREKAAR 400
Cdd:cd00817 183 LEAVKEGDIKFVPERMEKRYENWLENIRDWCISRQLWWGHRIPAWYC------------KDGGHWVVAREEDEAIDKAAP 250
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 401 EFGVSPDKISLQQDEDVLDTWFSSGLFPFSIFGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGKLPFREV 480
Cdd:cd00817 251 EACVPCGGEELKQDEDVLDTWFSSSLWPFSTLGWPEETKDLKKFYPTSLLVTGHDIIFFWVARMIMRGLKLTGKLPFKEV 330
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 481 YLHAIVRDAHGRKMSKSLGNVIDPLDVihgvslqglydqllnsnldpsevekakegqkadfpagIPECGTDALRFGLCAY 560
Cdd:cd00817 331 YLHGLVRDEDGRKMSKSLGNVIDPLDV-------------------------------------IDGYGADALRFTLASA 373
|
....*....
gi 1039753239 561 TSQGRDINL 569
Cdd:cd00817 374 ATQGRDINL 382
|
|
| valS |
PRK13208 |
valyl-tRNA synthetase; Reviewed |
1-805 |
4.03e-120 |
|
valyl-tRNA synthetase; Reviewed
Pssm-ID: 237306 [Multi-domain] Cd Length: 800 Bit Score: 383.77 E-value: 4.03e-120
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 1 MRGETTLWNPGCDHAGIATQVVVEKKLwkerGLNRHQLGREAFLE--EVWKWKAEKGDRiyHQLKKLGSSLDWDRACFTM 78
Cdd:PRK13208 73 MRGYNVFFPQGWDDNGLPTERKVEKYY----GIRKDDISREEFIElcRELTDEDEKKFR--ELWRRLGLSVDWSLEYQTI 146
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 79 DPKLSATVTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDKKELTGRtllpvpgykekvefgvLVSFAYKVQGsds 158
Cdd:PRK13208 147 SPEYRRISQKSFLDLYKKGLIYRAEAPVLWCPRCETAIAQAEVEYREREGK----------------LNYIKFPVED--- 207
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 159 DEEVVVATTRIETMLGDVAVAVHPKDPRYQHLKGKCVVHPFLSRSLPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRH 238
Cdd:PRK13208 208 GEEIEIATTRPELLPACVAVVVHPDDERYKHLVGKTAIVPLFGVEVPILADPLVDPDFGTGAVMICTFGDKTDVTWWREL 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 239 RLEAISIMDSKGALINVPPPFLGLPRFEARKAVLAALKERGLFRGVKDNPMVVPLCNRSKDVVEPLLRPQWYVRCGEMAQ 318
Cdd:PRK13208 288 NLPTRIIIDEDGRMTEAAGKLAGLTIEEARKKIVEDLKSGGLLGKQEPIKHNVKFCERCDTPLEILVTRQWFIKVLDLKE 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 319 AAsaaVTRGD-LRILPEAHQRTWHSWMDNIR-DWCISRQ--------LWW----GHRIPA----YFItvhDPA--VPPGE 378
Cdd:PRK13208 368 EL---LERGKeINWYPEHMRVRLENWIEGLNwDWCISRQryfgtpipVWYckdcGHPILPdeedLPV---DPTkdEPPGY 441
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 379 DPDGRywvsGRTEAEArekaarefgvspdkislqqDEDVLDTWFSSGLFPFSIFGWPNQSEDLSVFYPGTLLETGHDILF 458
Cdd:PRK13208 442 KCPQC----GSPGFEG-------------------ETDVMDTWATSSITPLIVTGWERDEDLFEKVFPMDLRPQGHDIIR 498
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 459 FW----VARMVMLglklTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIhgvslqglydqllnsnldpsevekak 534
Cdd:PRK13208 499 TWlfytILRAYLL----TGKLPWKNIMISGMVLDPDGKKMSKSKGNVVTPEELL-------------------------- 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 535 egqkadfpagiPECGTDALRFGLcAYTSQGRDINLDVNRILGYRHFCNKLWNATKFALrGLGKGFVPSATSKPEghesLV 614
Cdd:PRK13208 549 -----------EKYGADAVRYWA-ASARLGSDTPFDEKQVKIGRRLLTKLWNASRFVL-HFSADPEPDKAEVLE----PL 611
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 615 DRWIRSRLTEAVRLSNEGFQAYDFPAITTAQYSFWLYELCDVYLECLKPVL-NGVDQVAAECARQTLYTCLDVGLRLLSP 693
Cdd:PRK13208 612 DRWILAKLAKVVEKATEALENYDFAKALEEIESFFWHVFCDDYLELVKSRAyGEDEEEEQKSARYTLYTVLDTLLRLLAP 691
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 694 FMPFVTEELFQRLPRRtpkapaSLCVTPYPEPSEcSWKDPEAEAALELALSITRAVRSLRADYNLTRTRPdcfLEVADEA 773
Cdd:PRK13208 692 FLPFITEEVWSWLYGG------SVHRASWPEPDE-ELIDEEDEELGELAKEILSAVRKYKSEAGLSLNAP---LKKVEVY 761
|
810 820 830
....*....|....*....|....*....|..
gi 1039753239 774 TGALASAVSGYVQALASAGVVAVLALGAPAPQ 805
Cdd:PRK13208 762 GPADLELLEAAEEDLKAAGNIEELELVEGDPE 793
|
|
| IleS |
COG0060 |
Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Isoleucyl-tRNA ... |
23-780 |
7.88e-80 |
|
Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Isoleucyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 439830 [Multi-domain] Cd Length: 931 Bit Score: 277.73 E-value: 7.88e-80
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 23 VEKKLwkerGLNR---HQLGREAFLEE----VWKWKAEKGDriyhQLKKLGSSLDWDRACFTMDPKLSATVTEAFVRLHE 95
Cdd:COG0060 103 VEKEL----GIKKkdiEKVGIAEFREKcreyALKYVDEQRE----DFKRLGVWGDWDNPYLTMDPEYEESIWWALKKLYE 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 96 EGVIYRSTRLVNWSCTLNSAISDIEVdkkeltgrtllpvpGYKEKVEFGVLVSFayKVQGS-----DSDEEVVVATTRIE 170
Cdd:COG0060 175 KGLLYKGLKPVPWCPRCGTALAEAEV--------------EYKDVTSPSIYVKF--PVKDEkalllLEDAYLVIWTTTPW 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 171 TMLGDVAVAVHP---------KDPRY----------------------------QHLKGKCVVHPFL-----SRSLPIVF 208
Cdd:COG0060 239 TLPANLAVAVHPdidyvlvevTGGERlilaealveavlkelgiedyevlatfkgAELEGLRYEHPFYyvvgyDRAHPVIL 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 209 DDFVDMEFGTGAVKITPAHDQNDYEVGQRHRLEAISIMDSKGALINVPPPFLGLPRFEARKAVLAALKERG-LFRGVKdn 287
Cdd:COG0060 319 GDYVTTEDGTGIVHTAPGHGEDDFEVGKKYGLPVLNPVDDDGRFTEEAPLFAGLFVKDANPAIIEDLKERGaLLAREK-- 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 288 pmVV---PLCNRSKdvvEPLL---RPQWYVRCGEMAQAASAAVTR-------GDLRIlpeahqrtwHSWMDNIRDWCISR 354
Cdd:COG0060 397 --IThsyPHCWRCK---TPLIyraTPQWFISMDKLRDRALEAIEKvnwipewGEGRF---------GNMLENRPDWCISR 462
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 355 QLWWGHRIPAYfitVHDPavpPGEDPDGRYWVSGRTEAEAREKAAREFGVSPDKISLQQD-------------EDVLDTW 421
Cdd:COG0060 463 QRYWGVPIPIW---VCED---CGELHRTEEVIGSVAELLEEEGADAWFELDLHRPFLDETlkcpkcggtmrrvPDVLDVW 536
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 422 FSSGLFPFSIFgwpNQSEDLSvfYPGTL-LEtGHD---------ILffwvarmvmLGLKLTGKLPFREVYLHAIVRDAHG 491
Cdd:COG0060 537 FDSGSMHFAVL---ENREELH--FPADFyLE-GSDqtrgwfyssLL---------TSTALFGRAPYKNVLTHGFVLDEDG 601
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 492 RKMSKSLGNVIDPLDVIhgvslqglyDQLlnsnldpsevekakegqkadfpagipecGTDALRFgLCAYTSQGRDINLDV 571
Cdd:COG0060 602 RKMSKSLGNVVDPQEVI---------DKY----------------------------GADILRL-WVASSDYWGDLRFSD 643
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 572 NRILGYRHFCNKLWNATKFALRGLGkGFVPSATSKPEGHESLVDRWIRSRLTEAVRLSNEGFQAYDFPAITTAqysfwLY 651
Cdd:COG0060 644 EILKEVRDVYRRLRNTYRFLLANLD-DFDPAEDAVPYEDLPELDRWILSRLNELIKEVTEAYDNYDFHRAYRA-----LH 717
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 652 ELCDV-----YLECLKPVL--NGVDQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRrtpKAPASLCVTPYPE 724
Cdd:COG0060 718 NFCVEdlsnwYLDISKDRLytEAADSLDRRAAQTTLYEVLETLVRLLAPILPFTAEEIWQNLPG---EAEESVHLADWPE 794
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*.
gi 1039753239 725 PSEcSWKDPeaeaalelalsitravrSLRADYNLTRtrpdcflEVADEATGALASA 780
Cdd:COG0060 795 VDE-ELIDE-----------------ELEAKWDLVR-------EVRSAVLKALEAA 825
|
|
| Anticodon_Ia_Val |
cd07962 |
Anticodon-binding domain of valyl tRNA synthetases; This domain is found in valyl tRNA ... |
569-706 |
5.00e-61 |
|
Anticodon-binding domain of valyl tRNA synthetases; This domain is found in valyl tRNA synthetases (ValRS), which belong to the class Ia aminoacyl tRNA synthetases. It lies C-terminal to the catalytic core domain, and recognizes and specifically binds to the tRNA anticodon. ValRS catalyzes the transfer of valine to the 3'-end of its tRNA.
Pssm-ID: 153416 [Multi-domain] Cd Length: 135 Bit Score: 203.17 E-value: 5.00e-61
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 569 LDVNRILGYRHFCNKLWNATKFALRGLGKGFVPSATSKPEgheSLVDRWIRSRLTEAVRLSNEGFQAYDFPAITTAQYSF 648
Cdd:cd07962 1 FDEKRVEGGRNFCNKLWNAARFVLMNLEDDDEPEEDPESL---SLADRWILSRLNKTVEEVTEALENYRFSEAATALYEF 77
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*...
gi 1039753239 649 WLYELCDVYLECLKPVLNGVDQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRL 706
Cdd:cd07962 78 FWNDFCDWYLELVKPRLYGEDEEEKKAARATLYYVLETILRLLHPFMPFITEELWQRL 135
|
|
| PLN02843 |
PLN02843 |
isoleucyl-tRNA synthetase |
61-730 |
3.76e-39 |
|
isoleucyl-tRNA synthetase
Pssm-ID: 215452 [Multi-domain] Cd Length: 974 Bit Score: 157.24 E-value: 3.76e-39
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 61 QLKKLGSSLDWDRACFTMDPKLSATVTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDKKEltgrtllpvpGYKEK 140
Cdd:PLN02843 124 SFKRYGVWGDWENPYLTLDPEYEAAQIEVFGQMFLNGYIYRGRKPVHWSPSSRTALAEAELEYPE----------GHVSK 193
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 141 VEFGVL-VSFAYKVQGSDSDE-----EVVVATTRIETMLGDVAVAVHPK----------------------DPRYQHL-- 190
Cdd:PLN02843 194 SIYVAFpVVSPSETSPEELEEflpglSLAIWTTTPWTMPANAAVAVNDKlqysvvevqsfsedestsggnkKKRPGNVlk 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 191 ---KGKCVV---------------------------------HPFLSRSLPIVFD-DFVDMEFGTGAVKITPAHDQNDYE 233
Cdd:PLN02843 274 eqqKLFLIVatdlvpaleakwgvklvvlktfpgsdlegcryiHPLYNRESPVVIGgDYITTESGTGLVHTAPGHGQEDYI 353
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 234 VGQRHRLEAISIMDSKGALINVPPPFLGLPRF-EARKAVLAALKERGLFrgVKDNPMV--VPLCNRSKdvvEP-LLRP-- 307
Cdd:PLN02843 354 TGLKYGLPLLSPVDDAGKFTEEAGQFSGLSVLgEGNAAVVEALDEAGSL--LMEEAYGhkYPYDWRTK---KPtIFRAte 428
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 308 QWYVRCGEMAQAASAAVtrGDLRILPEAHQRTWHSWMDNIRDWCISRQLWWGHRIPAYF------------ITVHDPAVP 375
Cdd:PLN02843 429 QWFASVEGFRQAALDAI--DKVKWIPAQGENRIRAMVSGRSDWCISRQRTWGVPIPVFYhvetkeplmneeTIAHVKSIV 506
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 376 PGEDPDGrYW---VSGRTEAEAREKAARefgvspdkisLQQDEDVLDTWFSSGlfpFSIFGWPNQSEDLSvfYPGTLLET 452
Cdd:PLN02843 507 AQKGSDA-WWymdVEDLLPEKYRDKASD----------YEKGTDTMDVWFDSG---SSWAGVLGSREGLS--YPADLYLE 570
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 453 GHDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGvslqglydqllnsnldpsevek 532
Cdd:PLN02843 571 GSDQHRGWFQSSLLTSVATKGKAPYKSVLTHGFVLDEKGFKMSKSLGNVVDPRLVIEG---------------------- 628
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 533 aKEGQKADfpagiPECGTDALRFGLCA--YTSqgrDINLDVNrIL-----GYRhfcnKLWNATKFALRGLGKgFVPSATS 605
Cdd:PLN02843 629 -GKNQKQE-----PAYGADVLRLWVASvdYTG---DVLIGPQ-ILkqmsdIYR----KLRGTLRYLLGNLHD-WKPDNAV 693
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 606 KpegHESL--VDRWIRSRLTEAVRLSNEGFQAYDFPAITTAQYSFWLYELCDVYLECLKPVL--NGVDQVAAECARQTLY 681
Cdd:PLN02843 694 P---YEDLpsIDKYALFQLENVVNEIEESYDNYQFFKIFQILQRFTIVDLSNFYLDVAKDRLyvGGTTSFTRRSCQTVLA 770
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|
gi 1039753239 682 TCLDVGLRLLSPFMPFVTEELFQRLPRRTPKAPA-SLCVTPYPEPSEcSW 730
Cdd:PLN02843 771 AHLLSLLRAIAPILPHLAEDAWQNLPFQEDGSAAeSVFEAGWPTPNE-EW 819
|
|
| PLN02882 |
PLN02882 |
aminoacyl-tRNA ligase |
63-727 |
3.20e-38 |
|
aminoacyl-tRNA ligase
Pssm-ID: 215477 [Multi-domain] Cd Length: 1159 Bit Score: 154.50 E-value: 3.20e-38
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 63 KKLGSSLDWDRACFTMDPKLSATVTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDKKeltgrtllpvpgYKEKVE 142
Cdd:PLN02882 135 TRTGRWIDFENDYKTMDPKFMESVWWVFKQLFEKGLVYKGFKVMPYSTACKTPLSNFEAGLN------------YKDVSD 202
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 143 FGVLVSFAykVQGsDSDEEVVVA-TTRIETMLGDVAVAVHPK------------------DPRYQHL--------KGK-- 193
Cdd:PLN02882 203 PAVMVSFP--IVG-DPDNASFVAwTTTPWTLPSNLALCVNPNftyvkvrnkytgkvyivaESRLSALptakpkskKGSkp 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 194 -------CVVHPFLSRSL------PI--------------VFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHRL-----E 241
Cdd:PLN02882 280 enaaegyEVLAKVPGSSLvgkkyePLfdyfsefsdtafrvVADDYVTDDSGTGVVHCAPAFGEDDYRVCLANGIiekggN 359
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 242 AISIMDSKGALINVPPPFLGLPRFEARKAVLAALKERGlfRGVKDNPMV--VPLCNRSKdvvEPLLR---PQWYVRCGEM 316
Cdd:PLN02882 360 LPVPVDDDGCFTEKVTDFSGRYVKDADKDIIAAIKAKG--RLVKSGSIThsYPFCWRSD---TPLIYravPSWFVKVEEI 434
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 317 AQaasaavtrgdlRILPEAHQRTW----------HSWMDNIRDWCISRQLWWGHRIPAYFitvhdpavppgeDPDGRYWV 386
Cdd:PLN02882 435 KD-----------RLLENNKQTYWvpdyvkekrfHNWLENARDWAVSRSRFWGTPLPIWI------------SDDGEEVV 491
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 387 SGRTEAEARE---------------------KAAREFGVspdkisLQQDEDVLDTWFSSGLFPFSIFGWPNQSEDLsvF- 444
Cdd:PLN02882 492 VIGSIAELEKlsgvkvtdlhrhfidhitipsSRGPEFGV------LRRVDDVFDCWFESGSMPYAYIHYPFENKEL--Fe 563
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 445 --YPGTLLETGHDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLYDQLLN 522
Cdd:PLN02882 564 knFPADFVAEGLDQTRGWFYTLMVLSTALFDKPAFKNLICNGLVLAEDGKKMSKSLKNYPDPNEVIDKYGADALRLYLIN 643
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 523 SnldpsevekakegqkadfpagiPECGTDALRFGLCAYTSQGRDINLD-VNrilGYRHFcnkLWNATKFALRGLGKgFVP 601
Cdd:PLN02882 644 S----------------------PVVRAEPLRFKEEGVFGVVKDVFLPwYN---AYRFL---VQNAKRLEVEGGAP-FVP 694
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 602 SATSKPEGHESLVDRWIRSRLTEAVRLSNEGFQAYDFPAITTAQYSFwLYELCDVYLECLKPVLNGVDQVA-AECARQTL 680
Cdd:PLN02882 695 LDLAKLQNSANVLDRWINSATQSLVKFVREEMGAYRLYTVVPYLVKF-IDNLTNIYVRFNRKRLKGRTGEEdCRTALSTL 773
|
730 740 750 760
....*....|....*....|....*....|....*....|....*..
gi 1039753239 681 YTCLDVGLRLLSPFMPFVTEELFQRLPRRTPKAPASLCVTPYPEPSE 727
Cdd:PLN02882 774 YNVLLTSCKVMAPFTPFFTEVLYQNLRKVLPGSEESIHYCSFPQVDE 820
|
|
| Ile_Leu_Val_MetRS_core |
cd00668 |
catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases; Catalytic ... |
307-508 |
6.99e-37 |
|
catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases; Catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases. These class I enzymes are all monomers. However, in some species, MetRS functions as a homodimer, as a result of an additional C-terminal domain. These enzymes aminoacylate the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. Enzymes in this subfamily share an insertion in the core domain, which is subject to both deletions and rearrangements. This editing region hydrolyzes mischarged cognate tRNAs and thus prevents the incorporation of chemically similar amino acids. MetRS has a significantly shorter insertion, which lacks the editing function.
Pssm-ID: 185674 [Multi-domain] Cd Length: 312 Bit Score: 141.40 E-value: 6.99e-37
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 307 PQWYVRCGEMAQAASAAVTRGDlrILPEAHQRTWHSWMDNIRDWCISRQLWWGHRIPayfitvhdpavppgedpdgrywv 386
Cdd:cd00668 140 EQWFFDMPKFKEKLLKALRRGK--IVPEHVKNRMEAWLESLLDWAISRQRYWGTPLP----------------------- 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 387 sgrteaearekaarefgvspdkislqqdEDVLDTWFSSGLFPFSIFGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVM 466
Cdd:cd00668 195 ----------------------------EDVFDVWFDSGIGPLGSLGYPEEKEWFKDSYPADWHLIGKDILRGWANFWIT 246
|
170 180 190 200
....*....|....*....|....*....|....*....|..
gi 1039753239 467 LGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVI 508
Cdd:cd00668 247 MLVALFGEIPPKNLLVHGFVLDEGGQKMSKSKGNVIDPSDVV 288
|
|
| IleRS_core |
cd00818 |
catalytic core domain of isoleucyl-tRNA synthetases; Isoleucine amino-acyl tRNA synthetases ... |
263-524 |
1.04e-29 |
|
catalytic core domain of isoleucyl-tRNA synthetases; Isoleucine amino-acyl tRNA synthetases (IleRS) catalytic core domain . This class I enzyme is a monomer which aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. IleRS has an insertion in the core domain, which is subject to both deletions and rearrangements. This editing region hydrolyzes mischarged cognate tRNAs and thus prevents the incorporation of chemically similar amino acids.
Pssm-ID: 173909 [Multi-domain] Cd Length: 338 Bit Score: 121.19 E-value: 1.04e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 263 PRFEArkAVLAALKE---RGL-FRGVKdnPMVVPLCNRSKdvvepllrPQWYVRCGEMAQAASAAVTRgdLRILPEAHQR 338
Cdd:cd00818 115 PEYME--SVWWVFKQlheKGLlYRGYK--VVPWPLIYRAT--------PQWFIRVTKIKDRLLEANDK--VNWIPEWVKN 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 339 TWHSWMDNIRDWCISRQLWWGHRIPAyfitvhdpavppgedpdgryWVSgrteaearekaarefgVSPDKISLQQDEDVL 418
Cdd:cd00818 181 RFGNWLENRRDWCISRQRYWGTPIPV--------------------WYC----------------EDCGEVLVRRVPDVL 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 419 DTWFSSGLFPFSIFGWPNQSEDLSVFYPGTLLETGHDILFFWVARMVMLGLKLTGKLPFREVYLHAIVRDAHGRKMSKSL 498
Cdd:cd00818 225 DVWFDSGSMPYAQLHYPFENEDFEELFPADFILEGSDQTRGWFYSLLLLSTALFGKAPYKNVIVHGFVLDEDGRKMSKSL 304
|
250 260
....*....|....*....|....*...
gi 1039753239 499 GNVIDPLDVI--HGVSLQGLYdqLLNSN 524
Cdd:cd00818 305 GNYVDPQEVVdkYGADALRLW--VASSD 330
|
|
| PTZ00427 |
PTZ00427 |
isoleucine-tRNA ligase, putative; Provisional |
23-708 |
4.19e-29 |
|
isoleucine-tRNA ligase, putative; Provisional
Pssm-ID: 173617 [Multi-domain] Cd Length: 1205 Bit Score: 125.46 E-value: 4.19e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 23 VEKKLWKERGLNRHQ----LGREAFLEEVWKWKAEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSATVTEAFVRLHEEGV 98
Cdd:PTZ00427 155 IEYEIEKENNINKKEdilkMGIDVYNEKCRGIVLKYSNEWVKTVERIGRWIDFKNDYKTMDKTFMESVWWVFSELYKNNY 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 99 IYRSTRLVNWSCTLNSAISDIEV--------------------------------DKKELTGRTLLPVpgYKEKVEFG-- 144
Cdd:PTZ00427 235 VYKSFKVMPYSCKCNTPISNFELnlnykdtpdpsiiisfvlcsdfpkveeecnieEDKQLLGEKYSVL--YNNKRENSnn 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 145 ----------------------------------VLVSFAY-KVQGSDSDEEVVVATTRIETMLGDVAVAV--------- 180
Cdd:PTZ00427 313 gnnnstnnvcyaqhseilawtttpwtlpsnlalcVNEHFTYlRIHHVKSNRVVIVGECRLEWIMKELKWNVedlkivnrf 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 181 ---HPKDPRYQHLKGKCV-VHPFLSRSLPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHRL----EAISI--MDSKG 250
Cdd:PTZ00427 393 kgkELKGLRYKPLFTNFYeKYNFKERAYKILADDFVTDDAGTGIVHCAPTYGEDDFRVCKKNGVidpeKNIFIdpLDANG 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 251 ALINVPPPFLGLPRFEARKAVLAALKERGlfRGVKDNPMV--VPLCNRSKdvvEPLLR---PQWYVRcgeMAQAASAAVT 325
Cdd:PTZ00427 473 YFTNEVEEVQNLYIKEADNVIKKKLKNEN--RLLSNNTIVhsYPFCWRSD---TPLIYraiPAWFIR---VSNSTNELVK 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 326 RGDLRILPEAH--QRTWHSWMDNIRDWCISRQLWWGHRIPAY-------FITVHdpAVPPGEDPDG--------RYWVSg 388
Cdd:PTZ00427 545 NNETTYWIPAHikEKKFHNWIKDAKDWCISRNRYWGTPIPIWadekmetVICVE--SIKHLEELSGvknindlhRHFID- 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 389 rtEAEAREKAAREFGvspdkiSLQQDEDVLDTWFSSGLFPFSIFGWP--NQSEDLSVFYPGTLLETGHDILFFWVARMVM 466
Cdd:PTZ00427 622 --HIEIKNPKGKTYP------KLKRIPEVFDCWFESGSMPYAKVHYPfsTEKEDFHKIFPADFIAEGLDQTRGWFYTLLV 693
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 467 LGLKLTGKLPFREVYLHAIVRDAHGRKMSKSLGNVIDPLDVIHGVSLQGLYDQLLNSNLDPSEVEKAKEgqkadfpAGIP 546
Cdd:PTZ00427 694 ISTLLFDKAPFKNLICNGLVLASDGKKMSKRLKNYPDPLYILDKYGADSLRLYLINSVAVRAENLKFQE-------KGVN 766
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 547 EcgtdALRFGLCAYTSQGRDINLDVNRIlgyrhfcnKLWNATKFALRglgkgfvpsaTSKPEGHESLVDRWIRSRLTEAV 626
Cdd:PTZ00427 767 E----VVKSFILPFYHSFRFFSQEVTRY--------ECLNKKQFLFN----------TDYIYKNDNIMDQWIFSSVQSLT 824
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 627 RLSNEGFQAYDFPAITTAQYSFwLYELCDVYLECLKPVLNGV----DQVAAECarqTLYTCLDVGLRLLSPFMPFVTEEL 702
Cdd:PTZ00427 825 KSVHTEMKAYKLYNVLPKLLQF-IENLTNWYIRLNRDRMRGSlgeeNCLQSLC---TTYRTLHLFTVLMAPFTPFITEYI 900
|
....*.
gi 1039753239 703 FQRLPR 708
Cdd:PTZ00427 901 YQQLRR 906
|
|
| Anticodon_1 |
pfam08264 |
Anticodon-binding domain of tRNA ligase; This domain is found mainly hydrophobic tRNA ... |
615-758 |
7.76e-29 |
|
Anticodon-binding domain of tRNA ligase; This domain is found mainly hydrophobic tRNA synthetases. The domain binds to the anticodon of the tRNA ligase.
Pssm-ID: 400523 [Multi-domain] Cd Length: 141 Bit Score: 112.50 E-value: 7.76e-29
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 615 DRWIRSRLTEAVRLSNEGFQAYDFPAITTAQYSFWLYELCDVYLECLKPVLNGVDqvAAECARQTLYTCLDVGLRLLSPF 694
Cdd:pfam08264 1 DRWILSRLNKLIKEVTEAYENYRFNTAAQALYEFFWNDLSDWYLELIKDRLYGEE--PDSRAQTTLYEVLETLLRLLAPF 78
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1039753239 695 MPFVTEELFQRLprrtpkapaSLCVTPYPEPSECSwkDPEAEAALELALSITRAVRSLRADYNL 758
Cdd:pfam08264 79 MPFITEELWQKE---------SIHLAPWPEDAELE--EAELEEAFELRQEIVQAIRKLRSELKI 131
|
|
| leuS_bact |
TIGR00396 |
leucyl-tRNA synthetase, eubacterial and mitochondrial family; The leucyl-tRNA synthetases ... |
49-706 |
1.70e-23 |
|
leucyl-tRNA synthetase, eubacterial and mitochondrial family; The leucyl-tRNA synthetases belong to two families so broadly different that they are represented by separate models. This model includes both eubacterial and mitochondrial leucyl-tRNA synthetases. It generates higher scores for some valyl-tRNA synthetases than for any archaeal or eukaryotic cytosolic leucyl-tRNA synthetase. Note that the enzyme from Aquifex aeolicus is split into alpha and beta chains; neither chain is long enough to score above the trusted cutoff, but the alpha chain scores well above the noise cutoff. The beta chain must be found by a model and search designed for partial length matches. [Protein synthesis, tRNA aminoacylation]
Pssm-ID: 273057 [Multi-domain] Cd Length: 842 Bit Score: 107.14 E-value: 1.70e-23
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 49 KWKAEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSATVTEAFVRLHEEGVIYRSTRLVNWSCTLNSAI------------ 116
Cdd:TIGR00396 95 KWTYENIANMKKQLQALGFSYDWDREIATCDPEYYKWTQWIFLELFEKGLAYVKEADVNWCPNDGTVLaneqvdsdgrsw 174
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 117 -SDIEVDKKELTgRTLLPVPGYKEKV------------------------EFGVLVSFAYKvqgsDSDEEVVVATTRIET 171
Cdd:TIGR00396 175 rGDTPVEKKELK-QWFLKITAYAEELlndleeldhwpesvkemqrnwigkSEGVEITFKIA----DHDEKITVFTTRPDT 249
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 172 MLGDVAVAVHPKDPRYQH---------------------------------LKGKCVVHPFLSRSLPIVFDDFVDMEFGT 218
Cdd:TIGR00396 250 IFGVTYLALAPEHPLVEKaaennpkvaafikkilnktvaertkatkekkgvDTGIKAIHPLTGEKIPIWVANYVLMEYGT 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 219 GAVKITPAHDQNDYEVGQRHRLEAISIMDS-------------KGALINvPPPFLGLPRFEARKAVLAALKERGLfrgvk 285
Cdd:TIGR00396 330 GAVMGVPAHDERDFEFAQKYGLPIKPVIDPaekdlsltaayteDGVLVN-SGEFNGLNSSEARNAIIDMLEKEGK----- 403
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 286 dnpmvvplcnrSKDVVEpllrpqwYvrcgemaqaasaavtrgdlrilpeahqrtwhswmdNIRDWCISRQLWWGHRIPAY 365
Cdd:TIGR00396 404 -----------GKRKVN-------Y-----------------------------------RLRDWGFSRQRYWGEPIPII 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 366 FITVHDPAVPPGED------------PDG-------RYWVSgRTEAEAREKAAREfgvspdkislqqdEDVLDTWFSSG- 425
Cdd:TIGR00396 431 HCEDGGVVPVPEEDlpvilpedvvydGDGgsplsriPEWVN-VTCPSCGKPALRE-------------TDTMDTFAGSSw 496
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 426 -LFPFSIFGWPNQSED---LSVFYPGTLLETG--HDILF-----FWVARMVMLGLkLTGKLPFREVYLHAIV-------- 486
Cdd:TIGR00396 497 yYLRYLDPKNTDGPFDkekAEYWLPVDLYIGGieHAILHllyarFFHKFLRDIGY-VNTKEPFKKLINQGMVlgfyyppn 575
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 487 ---------------RDAHGR--------KMSKSLGNVIDPLDVIHgvslqglydqllnsnldpsevekakegqkadfpa 543
Cdd:TIGR00396 576 gkvpadvlterdekgKDKAGGelvyvgyeKMSKSKGNGIDPQEIVE---------------------------------- 621
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 544 gipECGTDALRFGLCAYTSQGRDINLDVNRILGYRHFCNKLWNatkFALRGLGKgfvPSATSKPEGHESLVDRWIRSRLT 623
Cdd:TIGR00396 622 ---SYGADALRLFIMFMGPIAASLEWNESGLEGARRFLDRVWN---LVYEITGE---LDAASLTVTALEEAQKELRRDVH 692
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 624 EAVRLSNEGFQ-AYDF-PAIttAQYSFWLYEL-----CDVYLECLKPVlngvdqvaaecarqtlytcldvgLRLLSPFMP 696
Cdd:TIGR00396 693 KFLKKVTEDLEkRESFnTAI--SAMMELLNKLykakkEALMLEYLKGF-----------------------VTVLSPFAP 747
|
810
....*....|
gi 1039753239 697 FVTEELFQRL 706
Cdd:TIGR00396 748 HLAEELWEKL 757
|
|
| LeuS |
COG0495 |
Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Leucyl-tRNA ... |
61-508 |
7.62e-21 |
|
Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Leucyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 440261 [Multi-domain] Cd Length: 826 Bit Score: 98.20 E-value: 7.62e-21
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 61 QLKKLGSSLDWDRACFTMDP-------KLsatvteaFVRLHEEGVIYRSTRLVNWSCTLN------------SAISDIEV 121
Cdd:COG0495 111 QLKRLGLSYDWSREIATCDPeyykwtqWI-------FLQLYEKGLAYRKEAPVNWCPVDQtvlaneqvidgrCWRCGAPV 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 122 DKKELTG----------RtLL----PVPGYKEKV----------EFGVLVSFAYKvqgsDSDEEVVVATTRIETMLGD-- 175
Cdd:COG0495 184 EKKELPQwflkitdyadE-LLddldKLDGWPEKVktmqrnwigrSEGAEVDFPVE----GSDEKITVFTTRPDTLFGAtf 258
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 176 VAVAV-HP---------KDPRYQHLKGKC-----------------------VVHPFLSRSLPIVFDDFVDMEFGTGAVK 222
Cdd:COG0495 259 MVLAPeHPlvkelatpeQNAAVAAFIEEAkkkseiertsetkektgvftglyAINPLTGEKIPIWIADYVLMDYGTGAVM 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 223 ITPAHDQNDYEVGQRHRL-----------EAISIMDS----KGALINvPPPFLGLPRFEARKAVLAALKERGLfrgvkdn 287
Cdd:COG0495 339 AVPAHDQRDFEFAKKYGLpikqviapedgDDPDILEEaytgDGVLIN-SGEFDGLDSEEAKEAIIEWLEEKGL------- 410
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 288 pmvvplcnrskdvvepllrpqwyvrcGEmaqaasAAVT-RgdlrilpeahqrtwhswmdnIRDWCISRQLWWGHRIPAyf 366
Cdd:COG0495 411 --------------------------GK------RKVNyR--------------------LRDWLISRQRYWGEPIPI-- 436
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 367 itVHDP-----AVP----------------PGEDPDGRY--WVS------GRteaeareKAAREFgvspdkislqqdeDV 417
Cdd:COG0495 437 --IHCEdcgvvPVPedqlpvelpedvdfdpTGGSPLARApeWVNvtcpkcGG-------PARRET-------------DT 494
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 418 LDTWF-SSglfpfsifgW-------PNQSE--------------DLsvfYPGtlletG--HDIL------FFWvarMVM- 466
Cdd:COG0495 495 MDTFVdSS---------WyylrytdPHNDEapfdpeaanywlpvDQ---YIG-----GieHAILhllyarFFT---KVLr 554
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|..
gi 1039753239 467 -LGLkLTGKLPFR---------EVYLHAIVRDAHGrKMSKSLGNVIDPLDVI 508
Cdd:COG0495 555 dLGL-VSFDEPFKrlltqgmvlEVGKDGVVIGGIE-KMSKSKGNVVDPDEII 604
|
|
| leuS |
PRK12300 |
leucyl-tRNA synthetase; Reviewed |
62-733 |
2.14e-19 |
|
leucyl-tRNA synthetase; Reviewed
Pssm-ID: 237049 [Multi-domain] Cd Length: 897 Bit Score: 93.78 E-value: 2.14e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 62 LKKLGSSLDWDRACFTMDPKLSATVTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDieVDKKELTGrtllpvpgyKEKV 141
Cdd:PRK12300 89 MKRIGYSIDWRREFTTTDPEYSKFIEWQFRKLKEKGLIVKGSHPVRYCPNDNNPVGD--HDLLDGEE---------PEIV 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 142 EFgVLVSFAykvqgsDSDEEV-VVATTRIETMLGDVAVAVHPKDP---------------------RYQH---------- 189
Cdd:PRK12300 158 EY-TLIKFE------ESEDLIlPAATLRPETIFGVTNLWVNPDATyvkaevdgekwivskeaaeklSFQDrdveiieeik 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 190 ---LKGKCVVHPFLSRSLPIVFDDFVDMEFGTGAVKITPAHDQNDY----EVGQRHRL----EAISIMD----------- 247
Cdd:PRK12300 231 gseLIGKKVKNPVTGKEVPILPADFVDPDNGTGVVMSVPAHAPYDYvalrDLKKNKELldviEPIPLIEvegygefpake 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 248 ---------------------------SKGALINVPPPFLGLPRFEARKAVLAALKERGLfrGVK----DNPMVVPLCNr 296
Cdd:PRK12300 311 vveklgiksqedpeleeatkevyraefHKGVLKENTGEYAGKPVREAREKITKDLIEKGI--ADImyefSNRPVYCRCG- 387
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 297 SKDVVEpLLRPQWYVRCGEMAQAASA--AVTRgdLRILPEAHQRTWHSWMDNIRDWCISRQLWWGHRIP----------- 363
Cdd:PRK12300 388 TECVVK-VVKDQWFIDYSDPEWKELAhkALDN--MEIIPEEYRKEFENTIDWLKDRACARRRGLGTRLPwdeewiiesls 464
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 364 ------AYFITVHdpavppgedpdgrywvsgrteaearekAAREFGVSPDKIslqqDEDVLDTWFSSGLFPFSIfgwpnq 437
Cdd:PRK12300 465 dstiymAYYTIAH---------------------------KIREYGIKPEQL----TPEFFDYVFLGKGDPEEV------ 507
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 438 SEDLSVfyPGTLLETGHDILFFWVArmvmLGLKLTGK------LPFReVYLH-AIVRDAH--------------GRKMSK 496
Cdd:PRK12300 508 SKKTGI--PKEILEEMREEFLYWYP----VDWRHSGKdlipnhLTFF-IFNHvAIFPEEKwprgivvngfvlleGKKMSK 580
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 497 SLGNVIdPLdvihgvslqglydqllnsnldpsevEKAKEgqkadfpagipECGTDALRFGLCAYTSQGRDINLDVNRILG 576
Cdd:PRK12300 581 SKGNVI-PL-------------------------RKAIE-----------EYGADVVRLYLTSSAELLQDADWREKEVES 623
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 577 YRHFCNKLWNatkFALRGLGKGfvpsatskPEGHESLVDRWIRSRLTEAVRLSNEGFQAYDF-PAITTAQYSfwLYELCD 655
Cdd:PRK12300 624 VRRQLERFYE---LAKELIEIG--------GEEELRFIDKWLLSRLNRIIKETTEAMESFQTrDAVQEAFYE--LLNDLR 690
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1039753239 656 VYLEcLKPVLNgvdqvaaecaRQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRTpkaPASLcvTPYPEPSEcSWKDP 733
Cdd:PRK12300 691 WYLR-RVGEAN----------NKVLREVLEIWIRLLAPFTPHLAEELWHKLGGEG---FVSL--EKWPEPDE-SKIDE 751
|
|
| Anticodon_Ia_Ile_ABEc |
cd07961 |
Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA ... |
578-727 |
1.51e-17 |
|
Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA synthetases; This domain is found in isoleucyl tRNA synthetases (IleRS), which belong to the class Ia aminoacyl tRNA synthetases. It lies C-terminal to the catalytic core domain, and recognizes and specifically binds to the tRNA anticodon. This family includes bacterial, archaeal, and eukaryotic cytoplasmic members. IleRS catalyzes the transfer of isoleucine to the 3'-end of its tRNA.
Pssm-ID: 153415 [Multi-domain] Cd Length: 183 Bit Score: 81.44 E-value: 1.51e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 578 RHFCNKLWNATKFAL--RGLgKGFVPSATSKPEGHESLVDRWIRSRLTEAVRLSNEGFQAYDFPAITTAQYSFWLyELCD 655
Cdd:cd07961 11 RKVLLPLWNAYRFFVtyANL-DGFDPGKDDDAVASLNVLDRWILSRLNSLIKEVTEEMEAYDLYTAVRALLEFID-ELTN 88
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1039753239 656 VYL----ECLKPVLNGVDQVAAecaRQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRTPKAPASLCVTPYPEPSE 727
Cdd:cd07961 89 WYIrrnrKRFWGEEGDDDKLAA---YATLYEVLLTLSRLMAPFTPFITEEIYQNLRRELGDAPESVHLLDWPEVDE 161
|
|
| PLN02563 |
PLN02563 |
aminoacyl-tRNA ligase |
18-379 |
6.93e-16 |
|
aminoacyl-tRNA ligase
Pssm-ID: 178177 [Multi-domain] Cd Length: 963 Bit Score: 82.56 E-value: 6.93e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 18 ATQVVveKKLWKERGLN-RHQLGREAFLEEVWKWKAEKG-----------DRIYHQLKKLGSSLDWDRACFTMDPKLSAT 85
Cdd:PLN02563 136 ATDIL--ARYKRMQGYNvLHPMGWDAFGLPAEQYAIETGthpkittlkniARFRSQLKSLGFSYDWDREISTTEPEYYKW 213
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 86 VTEAFVRLHEEGVIYRSTRLVNWSCTLNSAISDIEVDK--KELTGRTLLPVP--------------------------GY 137
Cdd:PLN02563 214 TQWIFLQLLKRGLAYQAEVPVNWCPALGTVLANEEVVDglSERGGHPVIRKPmrqwmlkitayadrlledlddldwpeSI 293
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 138 KE------------KVEFGVLvsfayKVQGSDSDEEVVVATTRIETMLGDVAVAVHPKDP-------------------- 185
Cdd:PLN02563 294 KEmqrnwigrsegaELDFSVL-----DGEGKERDEKITVYTTRPDTLFGATYLVVAPEHPllsslttaeqkeaveeyvda 368
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 186 --------RYQHLKGKCVV-------HPFLSRSLPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHRLEAISIMDS-- 248
Cdd:PLN02563 369 asrksdleRTELQKEKTGVftgsyaiNPATGEAIPIWVADYVLGSYGTGAIMAVPAHDTRDFEFAQKFDLPIKWVVKPad 448
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 249 ------------KGALINVPPPFL---GLPRFEARKAVLAALKERGlfrgvkdnpmvvplcNRSKDVVEPLlrpqwyvrc 313
Cdd:PLN02563 449 gneddaekaytgEGVIVNSSSSGLdinGLSSKEAAKKVIEWLEETG---------------NGKKKVNYKL--------- 504
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1039753239 314 gemaqaasaavtrgdlrilpeahqrtwhswmdniRDWCISRQLWWGHRIPAYFITVHDPAVPPGED 379
Cdd:PLN02563 505 ----------------------------------RDWLFARQRYWGEPIPVVFLEDSGEPVPVPES 536
|
|
| Anticodon_Ia_Ile_BEm |
cd07960 |
Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases; ... |
577-733 |
6.64e-13 |
|
Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases; This domain is found in isoleucyl tRNA synthetases (IleRS), which belong to the class Ia aminoacyl tRNA synthetases. It lies C-terminal to the catalytic core domain, and recognizes and specifically binds to the tRNA anticodon. This family includes bacterial and eukaryotic mitochondrial members. IleRS catalyzes the transfer of isoleucine to the 3'-end of its tRNA.
Pssm-ID: 153414 [Multi-domain] Cd Length: 180 Bit Score: 67.94 E-value: 6.64e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 577 YRhfcnKLWNATKFALRGLGkGFVPSATSKPEGHESLVDRWIRSRLTEAVRLSNEGFQAYDFPAITTAQYSFWLYELCDV 656
Cdd:cd07960 13 YR----KIRNTFRFLLGNLN-DFDPAKDAVPYEELLELDRYALHRLNELIKEVREAYENYEFHKVYQALNNFCTVDLSAF 87
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1039753239 657 YLECLKPVL--NGVDQVAAECARQTLYTCLDVGLRLLSPFMPFVTEELFQRLPRRTPKAPASLcvTPYPEPSEcSWKDP 733
Cdd:cd07960 88 YLDIIKDRLycDAKDSLERRSAQTVLYHILDALLKLLAPILPFTAEEVWEHLPGEKKEESVFL--EDWPELPE-EWKDE 163
|
|
| tRNA-synt_1_2 |
pfam13603 |
Leucyl-tRNA synthetase, Domain 2; This is a family of the conserved region of Leucine-tRNA ... |
144-271 |
2.33e-12 |
|
Leucyl-tRNA synthetase, Domain 2; This is a family of the conserved region of Leucine-tRNA ligase or Leucyl-tRNA synthetase, EC:6.1.1.4.
Pssm-ID: 433342 [Multi-domain] Cd Length: 185 Bit Score: 66.42 E-value: 2.33e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 144 GVLVSFAYKvqgsDSDEEVVVATTRIETMLGD--VAVAV-HP-------KDPRYQHLKGKC------------------- 194
Cdd:pfam13603 9 GAEITFPVE----GTDEKIEVFTTRPDTLMGVtfVALAPeHPlveklaeKNPEVAAFIEECkntseiertsetkekegvf 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 195 ----VVHPFLSRSLPIVFDDFVDMEFGTGAVKITPAHDQNDYEVGQRHRL------------EAISIMDS----KGALIN 254
Cdd:pfam13603 85 tglyAIHPITGEKIPIWIANFVLMEYGTGAVMAVPAHDQRDFEFAKKYNLpikpviqpedgdLDLDIMTEayteEGILVN 164
|
170
....*....|....*..
gi 1039753239 255 vPPPFLGLPRFEARKAV 271
Cdd:pfam13603 165 -SGEFDGLDSEEAKEAI 180
|
|
| MetG |
COG0143 |
Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Methionyl-tRNA ... |
342-706 |
8.43e-11 |
|
Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]; Methionyl-tRNA synthetase is part of the Pathway/BioSystem: Aminoacyl-tRNA synthetases
Pssm-ID: 439913 [Multi-domain] Cd Length: 544 Bit Score: 65.52 E-value: 8.43e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 342 SWMDN-IRDWCISRQLWWGhrIPayfitvhdpaVPpgEDPDGRYWVsgrteaearekaarefgvspdkislqqdedvldt 420
Cdd:COG0143 217 SWLKEgLQDLSISRDFDWG--IP----------VP--GDPGKVFYV---------------------------------- 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 421 WF-------SSglfpfsIFGWP---NQSEDLSVFYPGTLLETGH----DILFF----WVArMVM-LGLKLTGKLPfrevy 481
Cdd:COG0143 249 WFdaligyiSA------TKGYAddrGLPEDFEKYWPAPDTELVHfigkDIIRFhaiiWPA-MLMaAGLPLPKKVF----- 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 482 lhaivrdAH------GRKMSKSLGNVIDPLDVIhgvslqglydqllnsnldpsevekakegqkADFPAgipecgtDALRF 555
Cdd:COG0143 317 -------AHgfltveGEKMSKSRGNVIDPDDLL------------------------------DRYGP-------DALRY 352
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 556 GLCAYTSQGRDINLD-------------------VNRILGyrhFCNKLWNatkfalrglgkGFVPSAtskpeGHESLVDR 616
Cdd:COG0143 353 YLLREVPFGQDGDFSwedfvarvnsdlandlgnlASRTLS---MIHKYFD-----------GKVPEP-----GELTEADE 413
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 617 WIRSRLTEAVRLSNEGFQAYDFPAITTAqysfwLYELCDV---YLECLKP-VLngVDQVAAECARQTLYTCLDVgLR--- 689
Cdd:COG0143 414 ELLAEAEAALEEVAEAMEAFEFRKALEE-----IMALARAankYIDETAPwKL--AKDEDPERLATVLYTLLEA-LRila 485
|
410
....*....|....*...
gi 1039753239 690 -LLSPFMPFVTEELFQRL 706
Cdd:COG0143 486 iLLKPFLPETAEKILEQL 503
|
|
| Anticodon_Ia_like |
cd07375 |
Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains; This ... |
572-695 |
2.02e-08 |
|
Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains; This domain is found in a variety of class Ia aminoacyl tRNA synthetases, C-terminal to the catalytic core domain. It recognizes and specifically binds to the anticodon of the tRNA. Aminoacyl tRNA synthetases catalyze the transfer of cognate amino acids to the 3'-end of their tRNAs by specifically recognizing cognate from non-cognate amino acids. Members include valyl-, leucyl-, isoleucyl-, cysteinyl-, arginyl-, and methionyl-tRNA synthethases. This superfamily also includes a domain from MshC, an enzyme in the mycothiol biosynthetic pathway.
Pssm-ID: 153408 [Multi-domain] Cd Length: 117 Bit Score: 53.28 E-value: 2.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 572 NRILGYRHFCNKLWNATKFALRGLGKGFVPSATSKPEGheslVDRWIRSRLTEAVRLSNEGFQAYDFPAITTAQYSFWLY 651
Cdd:cd07375 2 ERLKQARAFLNRLYRLLSFFRKALGGTQPKWDNELLEE----ADRELLARLQEFIKRTTNALEALDPTTAVQELFKFTNE 77
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 1039753239 652 ElcDVYLECLKPVLNgvDQVAAECARQTLYTCLDVGLRLLSPFM 695
Cdd:cd07375 78 L--NWYLDELKPALQ--TEELREAVLAVLRAALVVLTKLLAPFT 117
|
|
| Anticodon_Ia_Leu_AEc |
cd07959 |
Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases; This ... |
602-706 |
9.65e-08 |
|
Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases; This domain is found in leucyl tRNA synthetases (LeuRS), which belong to the class Ia aminoacyl tRNA synthetases. It lies C-terminal to the catalytic core domain. In contrast to other class Ia enzymes, the anticodon is not used as an identity element in LeuRS (with exceptions such as Saccharomyces cerevisiae and some other eukaryotes). No anticodon-binding site can be defined for this family, which includes archaeal and eukaryotic cytoplasmic members. LeuRS catalyzes the transfer of leucine to the 3'-end of its tRNA.
Pssm-ID: 153413 [Multi-domain] Cd Length: 117 Bit Score: 51.05 E-value: 9.65e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 602 SATSKPEGHESLVDRWIRSRLTEAVRLSNEGFQAYDF-PAITTAQYSFwlYELCDVYLEclkpvlngvdQVAAECARQTL 680
Cdd:cd07959 24 IETEGELEELTFIDRWLLSRLNRLIKETTEAYENMQFrEALKEGLYEL--QNDLDWYRE----------RGGAGMNKDLL 91
|
90 100
....*....|....*....|....*.
gi 1039753239 681 YTCLDVGLRLLSPFMPFVTEELFQRL 706
Cdd:cd07959 92 RRFIEVWTRLLAPFAPHLAEEIWHEL 117
|
|
| PRK11893 |
PRK11893 |
methionyl-tRNA synthetase; Reviewed |
409-706 |
1.01e-06 |
|
methionyl-tRNA synthetase; Reviewed
Pssm-ID: 237012 [Multi-domain] Cd Length: 511 Bit Score: 52.19 E-value: 1.01e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 409 ISLQQDED-VLDTWFSsGLFPF-SIFGWPNQSEDLSV----FYPGTLLETGHDILFF----WVARMVMLGLKLTGKlpfr 478
Cdd:PRK11893 212 IPVPGDPKhVIYVWFD-ALTNYlTALGYPDDEELLAElfnkYWPADVHLIGKDILRFhavyWPAFLMAAGLPLPKR---- 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 479 eVYLHA-IVRDahGRKMSKSLGNVIDPLDVIHgvslqglydqllnsnldpsevekakegqkadfpagipECGTDALRFGL 557
Cdd:PRK11893 287 -VFAHGfLTLD--GEKMSKSLGNVIDPFDLVD-------------------------------------EYGVDAVRYFL 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 558 CAYTSQGRDINLDVNRILGYR--HFCNKLWN---ATKFALRGLGKGFVPSATSKPEGHESLVDRWIRSRltEAVRlsneg 632
Cdd:PRK11893 327 LREIPFGQDGDFSREAFINRInaDLANDLGNlaqRTLSMIAKNFDGKVPEPGALTEADEALLEAAAALL--ERVR----- 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 633 fQAYDFPAITTAQYSFW-LYELCDVYLECLKP-VLNGVDQvaaECARQTLYTCLDvGLR----LLSPFMPFVTEELFQRL 706
Cdd:PRK11893 400 -AAMDNLAFDKALEAILaLVRAANKYIDEQAPwSLAKTDP---ERLATVLYTLLE-VLRgiavLLQPVMPELAAKILDQL 474
|
|
| PRK12267 |
PRK12267 |
methionyl-tRNA synthetase; Reviewed |
433-508 |
1.26e-06 |
|
methionyl-tRNA synthetase; Reviewed
Pssm-ID: 237028 [Multi-domain] Cd Length: 648 Bit Score: 52.11 E-value: 1.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 433 GWPNQSEDLS-VFYPGTLLETGHDIL-F---FWVARMVMLGLKLtgklpFREVYLHA-IVRDahGRKMSKSLGNVIDPLD 506
Cdd:PRK12267 240 GYGSDDDELFkKFWPADVHLVGKDILrFhaiYWPIMLMALGLPL-----PKKVFAHGwWLMK--DGKMSKSKGNVVDPEE 312
|
..
gi 1039753239 507 VI 508
Cdd:PRK12267 313 LV 314
|
|
| Val_tRNA-synt_C |
pfam10458 |
Valyl tRNA synthetase tRNA binding arm; This domain is found at the C-terminus of Valyl tRNA ... |
827-889 |
7.13e-05 |
|
Valyl tRNA synthetase tRNA binding arm; This domain is found at the C-terminus of Valyl tRNA synthetases.
Pssm-ID: 431296 [Multi-domain] Cd Length: 66 Bit Score: 41.48 E-value: 7.13e-05
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1039753239 827 DPARELGKLQAKRSEAQRQAQRLQERRAASSYSAKVPLEVQEADEAKLQQTEAELRKVDEAIA 889
Cdd:pfam10458 1 DVEKERARLEKELAKLQKEIERVQGKLANPGFVAKAPAEVVEEEKAKLAELEEQAEKLRERLS 63
|
|
| LeuRS_core |
cd00812 |
catalytic core domain of leucyl-tRNA synthetases; Leucyl tRNA synthetase (LeuRS) catalytic ... |
49-108 |
2.15e-04 |
|
catalytic core domain of leucyl-tRNA synthetases; Leucyl tRNA synthetase (LeuRS) catalytic core domain. This class I enzyme is a monomer which aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. In Aquifex aeolicus, the gene encoding LeuRS is split in two, just before the KMSKS motif. Consequently, LeuRS is a heterodimer, which likely superimposes with the LeuRS monomer found in most other organisms. LeuRS has an insertion in the core domain, which is subject to both deletions and rearrangements and thus differs between prokaryotic LeuRS and archaeal/eukaryotic LeuRS. This editing region hydrolyzes mischarged cognate tRNAs and thus prevents the incorporation of chemically similar amino acids.
Pssm-ID: 173906 [Multi-domain] Cd Length: 314 Bit Score: 44.16 E-value: 2.15e-04
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 49 KWKAEKGDRIYHQLKKLGSSLDWDRACFTMDPKLSATVTEAFVRLHEEGVIYRSTRLVNW 108
Cdd:cd00812 66 DWTEYNIKKMKEQLKRMGFSYDWRREFTTCDPEYYKFTQWLFLKLYEKGLAYKKEAPVNW 125
|
|
| LeuRS_core |
cd00812 |
catalytic core domain of leucyl-tRNA synthetases; Leucyl tRNA synthetase (LeuRS) catalytic ... |
305-508 |
4.02e-04 |
|
catalytic core domain of leucyl-tRNA synthetases; Leucyl tRNA synthetase (LeuRS) catalytic core domain. This class I enzyme is a monomer which aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. In Aquifex aeolicus, the gene encoding LeuRS is split in two, just before the KMSKS motif. Consequently, LeuRS is a heterodimer, which likely superimposes with the LeuRS monomer found in most other organisms. LeuRS has an insertion in the core domain, which is subject to both deletions and rearrangements and thus differs between prokaryotic LeuRS and archaeal/eukaryotic LeuRS. This editing region hydrolyzes mischarged cognate tRNAs and thus prevents the incorporation of chemically similar amino acids.
Pssm-ID: 173906 [Multi-domain] Cd Length: 314 Bit Score: 43.39 E-value: 4.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 305 LRPQWYVRCGEMAQAASAAVTRGDLRILPEAHQRTWHSWMDnirdwcISRQLWWGHRIPayfitvhdpavppgedpdgry 384
Cdd:cd00812 128 LLDQWFLKYSETEWKEKLLKDLEKLDGWPEEVRAMQENWIG------CSRQRYWGTPIP--------------------- 180
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 385 WvsgrteaearekaarefgvspdkislqqdEDVLDTWFSSGLFP--FSIFGWPNQ---------SEDLSVFYPGTLLETG 453
Cdd:cd00812 181 W-----------------------------TDTMESLSDSTWYYarYTDAHNLEQpyegdlefdREEFEYWYPVDIYIGG 231
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1039753239 454 HD-----ILF--FWVArmVMLGLKLTGKLPFREVYLHAIVRdAHGRKMSKSLGNVIDPLDVI 508
Cdd:cd00812 232 KEhapnhLLYsrFNHK--ALFDEGLVTDEPPKGLIVQGMVL-LEGEKMSKSKGNVVTPDEAI 290
|
|
| PLN02224 |
PLN02224 |
methionine-tRNA ligase |
385-509 |
8.41e-04 |
|
methionine-tRNA ligase
Pssm-ID: 177869 [Multi-domain] Cd Length: 616 Bit Score: 43.16 E-value: 8.41e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 385 WVSGRTEAEAREKAAREFGVS-PDkislqQDEDVLDTWFSSGLFPFSIFGWPNQSEDL----SVFYPGTLLETGHDILFF 459
Cdd:PLN02224 260 WIKSGLRDFSISRALVDWGIPvPD-----DDKQTIYVWFDALLGYISALTEDNKQQNLetavSFGWPASLHLIGKDILRF 334
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....
gi 1039753239 460 ----WVARMVMLGLKLTgKLPFREVYLhaiVRDahGRKMSKSLGNVIDPLDVIH 509
Cdd:PLN02224 335 havyWPAMLMSAGLELP-KMVFGHGFL---TKD--GMKMGKSLGNTLEPFELVQ 382
|
|
| MetRS_core |
cd00814 |
catalytic core domain of methioninyl-tRNA synthetases; Methionine tRNA synthetase (MetRS) ... |
342-508 |
3.03e-03 |
|
catalytic core domain of methioninyl-tRNA synthetases; Methionine tRNA synthetase (MetRS) catalytic core domain. This class I enzyme aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. MetRS, which consists of the core domain and an anti-codon binding domain, functions as a monomer. However, in some species the anti-codon binding domain is followed by an EMAP domain. In this case, MetRS functions as a homodimer. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. As a result of a deletion event, MetRS has a significantly shorter core domain insertion than IleRS, ValRS, and LeuR. Consequently, the MetRS insertion lacks the editing function.
Pssm-ID: 173907 [Multi-domain] Cd Length: 319 Bit Score: 40.59 E-value: 3.03e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 342 SWMDN-IRDWCISRQLW-WGhrIPayfitvhdpaVPpgEDPDGRYWVsgrteaearekaarefgvspdkislqqdedvld 419
Cdd:cd00814 173 SWLKEgLKDLSITRDLFdWG--IP----------VP--LDPGKVIYV--------------------------------- 205
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039753239 420 tWF-------SSGLFPFSIFG-----WPNQSEDLSVFypgtlletGHDILFF----WVArMVM-LGLKLTGKLPfrevyl 482
Cdd:cd00814 206 -WFdaligyiSATGYYNEEWGnswwwKDGWPELVHFI--------GKDIIRFhaiyWPA-MLLgAGLPLPTRIV------ 269
|
170 180 190
....*....|....*....|....*....|..
gi 1039753239 483 haivrdAH------GRKMSKSLGNVIDPLDVI 508
Cdd:cd00814 270 ------AHgyltveGKKMSKSRGNVVDPDDLL 295
|
|
|