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Conserved domains on  [gi|1039771624|ref|XP_017176387|]
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coiled-coil domain-containing protein 60 isoform X2 [Mus musculus]

Protein Classification

coiled-coil domain-containing protein 60( domain architecture ID 11239076)

coiled-coil domain-containing protein 60 (CCDC60) is a DUF4698 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
DUF4698 pfam15769
Domain of unknown function (DUF4698); This family of proteins is found in eukaryotes. Proteins ...
59-551 0e+00

Domain of unknown function (DUF4698); This family of proteins is found in eukaryotes. Proteins in this family are typically between 464 and 550 amino acids in length.


:

Pssm-ID: 464857  Cd Length: 484  Bit Score: 752.41  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624  59 LIQCVKIGRGYFNILREENAMKKKQQLLQKLKE--EELNKFQPAKKFSDIHCRDNLLATYD--CEKLKKLEAGIIIRPFT 134
Cdd:pfam15769   1 LISAVKQGRGYFHILREESAEKKKQQLLQQLKEeeRRRTKFQPAKKSSEILRRDTLLGTYEeePKKSKKKKAKSTLRPFT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624 135 PIHSCLMAPSLPESHVDPLFRQLCALHWLLEALTIDHTHhTMRPLIACWNPKDPGGSKSTIKKINKDKSMGQRWDHFVTA 214
Cdd:pfam15769  81 PLHSSLLSPSLPEAHVEPLFRQLCALHWLLEALTLEPTH-TMKPVISCWNLKDPGGSKSTIKKINKEKSIEQRWEHFVTA 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624 215 PKTKKYKAPAIRTAmaSRKPSRRGSTLSLTRTSGGSSPQSSMMSVNPGSDEPM---------GSKDIEDNESSSTKPEEE 285
Cdd:pfam15769 160 SKTKKFKIPVSRST--NKKPSRRGSALSLSRMSGGSSPQSSMTSLNPGSDEPAlgsvltqvtGSKDIEDNESSSTKEDEE 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624 286 ILHLYLQKLLEMVREDARRTI-LVESEIQKKAPSILSLVKqiksEYGWKEWQTTHKSSERSSTTSAESHIQVIQKKSKSR 364
Cdd:pfam15769 238 PLSIYLQKLLEMVRESARRTLkMMENELQRKAPSILSLLK----DSAPKAKQTTHKSSERSSSTSGESHRPKSQKKIKSL 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624 365 VNRDI-IYCKTGVCSNMRAKFFSVAQEAGFCLQDKMEILRKRQEERGLQKFHSFIVTSNFQKDITKMRHQVSIVKGDAEE 443
Cdd:pfam15769 314 THIDIfIKSKSGLCSEMRAKFYEVAQEAAFCLHDKLEILERRQEERSLQKFLSLVLVSNFHKDLEKMRQAVVMVKGDAEE 393
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624 444 IADHWYFDLLSKLPEDLKSFRPAKKILMKLQKFGENLDLRIRPHVLLKVLQDLRIWELCSPDIAVAIEvhfnrgfgtsqk 523
Cdd:pfam15769 394 IADHWFFDLLSKLPEDVKNNRPAKKILKKLQKFGENLDLRIRPHVFLKVLQDLRTWELCSPDVAVAIE------------ 461
                         490       500
                  ....*....|....*....|....*...
gi 1039771624 524 rskshFVREHIIHMPQEDYINWLQSRVN 551
Cdd:pfam15769 462 -----FVREHIIHMPQEDYEAWLQSRVS 484
 
Name Accession Description Interval E-value
DUF4698 pfam15769
Domain of unknown function (DUF4698); This family of proteins is found in eukaryotes. Proteins ...
59-551 0e+00

Domain of unknown function (DUF4698); This family of proteins is found in eukaryotes. Proteins in this family are typically between 464 and 550 amino acids in length.


Pssm-ID: 464857  Cd Length: 484  Bit Score: 752.41  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624  59 LIQCVKIGRGYFNILREENAMKKKQQLLQKLKE--EELNKFQPAKKFSDIHCRDNLLATYD--CEKLKKLEAGIIIRPFT 134
Cdd:pfam15769   1 LISAVKQGRGYFHILREESAEKKKQQLLQQLKEeeRRRTKFQPAKKSSEILRRDTLLGTYEeePKKSKKKKAKSTLRPFT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624 135 PIHSCLMAPSLPESHVDPLFRQLCALHWLLEALTIDHTHhTMRPLIACWNPKDPGGSKSTIKKINKDKSMGQRWDHFVTA 214
Cdd:pfam15769  81 PLHSSLLSPSLPEAHVEPLFRQLCALHWLLEALTLEPTH-TMKPVISCWNLKDPGGSKSTIKKINKEKSIEQRWEHFVTA 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624 215 PKTKKYKAPAIRTAmaSRKPSRRGSTLSLTRTSGGSSPQSSMMSVNPGSDEPM---------GSKDIEDNESSSTKPEEE 285
Cdd:pfam15769 160 SKTKKFKIPVSRST--NKKPSRRGSALSLSRMSGGSSPQSSMTSLNPGSDEPAlgsvltqvtGSKDIEDNESSSTKEDEE 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624 286 ILHLYLQKLLEMVREDARRTI-LVESEIQKKAPSILSLVKqiksEYGWKEWQTTHKSSERSSTTSAESHIQVIQKKSKSR 364
Cdd:pfam15769 238 PLSIYLQKLLEMVRESARRTLkMMENELQRKAPSILSLLK----DSAPKAKQTTHKSSERSSSTSGESHRPKSQKKIKSL 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624 365 VNRDI-IYCKTGVCSNMRAKFFSVAQEAGFCLQDKMEILRKRQEERGLQKFHSFIVTSNFQKDITKMRHQVSIVKGDAEE 443
Cdd:pfam15769 314 THIDIfIKSKSGLCSEMRAKFYEVAQEAAFCLHDKLEILERRQEERSLQKFLSLVLVSNFHKDLEKMRQAVVMVKGDAEE 393
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624 444 IADHWYFDLLSKLPEDLKSFRPAKKILMKLQKFGENLDLRIRPHVLLKVLQDLRIWELCSPDIAVAIEvhfnrgfgtsqk 523
Cdd:pfam15769 394 IADHWFFDLLSKLPEDVKNNRPAKKILKKLQKFGENLDLRIRPHVFLKVLQDLRTWELCSPDVAVAIE------------ 461
                         490       500
                  ....*....|....*....|....*...
gi 1039771624 524 rskshFVREHIIHMPQEDYINWLQSRVN 551
Cdd:pfam15769 462 -----FVREHIIHMPQEDYEAWLQSRVS 484
 
Name Accession Description Interval E-value
DUF4698 pfam15769
Domain of unknown function (DUF4698); This family of proteins is found in eukaryotes. Proteins ...
59-551 0e+00

Domain of unknown function (DUF4698); This family of proteins is found in eukaryotes. Proteins in this family are typically between 464 and 550 amino acids in length.


Pssm-ID: 464857  Cd Length: 484  Bit Score: 752.41  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624  59 LIQCVKIGRGYFNILREENAMKKKQQLLQKLKE--EELNKFQPAKKFSDIHCRDNLLATYD--CEKLKKLEAGIIIRPFT 134
Cdd:pfam15769   1 LISAVKQGRGYFHILREESAEKKKQQLLQQLKEeeRRRTKFQPAKKSSEILRRDTLLGTYEeePKKSKKKKAKSTLRPFT 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624 135 PIHSCLMAPSLPESHVDPLFRQLCALHWLLEALTIDHTHhTMRPLIACWNPKDPGGSKSTIKKINKDKSMGQRWDHFVTA 214
Cdd:pfam15769  81 PLHSSLLSPSLPEAHVEPLFRQLCALHWLLEALTLEPTH-TMKPVISCWNLKDPGGSKSTIKKINKEKSIEQRWEHFVTA 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624 215 PKTKKYKAPAIRTAmaSRKPSRRGSTLSLTRTSGGSSPQSSMMSVNPGSDEPM---------GSKDIEDNESSSTKPEEE 285
Cdd:pfam15769 160 SKTKKFKIPVSRST--NKKPSRRGSALSLSRMSGGSSPQSSMTSLNPGSDEPAlgsvltqvtGSKDIEDNESSSTKEDEE 237
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624 286 ILHLYLQKLLEMVREDARRTI-LVESEIQKKAPSILSLVKqiksEYGWKEWQTTHKSSERSSTTSAESHIQVIQKKSKSR 364
Cdd:pfam15769 238 PLSIYLQKLLEMVRESARRTLkMMENELQRKAPSILSLLK----DSAPKAKQTTHKSSERSSSTSGESHRPKSQKKIKSL 313
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624 365 VNRDI-IYCKTGVCSNMRAKFFSVAQEAGFCLQDKMEILRKRQEERGLQKFHSFIVTSNFQKDITKMRHQVSIVKGDAEE 443
Cdd:pfam15769 314 THIDIfIKSKSGLCSEMRAKFYEVAQEAAFCLHDKLEILERRQEERSLQKFLSLVLVSNFHKDLEKMRQAVVMVKGDAEE 393
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1039771624 444 IADHWYFDLLSKLPEDLKSFRPAKKILMKLQKFGENLDLRIRPHVLLKVLQDLRIWELCSPDIAVAIEvhfnrgfgtsqk 523
Cdd:pfam15769 394 IADHWFFDLLSKLPEDVKNNRPAKKILKKLQKFGENLDLRIRPHVFLKVLQDLRTWELCSPDVAVAIE------------ 461
                         490       500
                  ....*....|....*....|....*...
gi 1039771624 524 rskshFVREHIIHMPQEDYINWLQSRVN 551
Cdd:pfam15769 462 -----FVREHIIHMPQEDYEAWLQSRVS 484
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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