|
Name |
Accession |
Description |
Interval |
E-value |
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
217-281 |
7.79e-34 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 124.82 E-value: 7.79e-34
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024359640 217 IGDRVLVGGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPRYGLFAPVHKV 281
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
pfam01302 |
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of ... |
61-125 |
5.04e-31 |
|
CAP-Gly domain; Cytoskeleton-associated proteins (CAPs) are involved in the organization of microtubules and transportation of vesicles and organelles along the cytoskeletal network. A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 460154 [Multi-domain] Cd Length: 65 Bit Score: 116.73 E-value: 5.04e-31
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024359640 61 VGERVWVNGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLRGIFTRPSKL 125
Cdd:pfam01302 1 VGDRVEVPGGRRGTVRYVGPVPFAPGVWVGVELDEPVGKNDGSVKGVRYFECPPKHGVFVRPSKV 65
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
217-282 |
2.51e-27 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 106.52 E-value: 2.51e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359640 217 IGDRVLVGGT-KAGVVRFLGETDFAKGEWCGVELDEPL-GKNDGAVAGTRYFQCQPRYGLFAPVHKVT 282
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPLrGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| CAP_GLY |
smart01052 |
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and ... |
61-126 |
2.77e-27 |
|
Cytoskeleton-associated proteins (CAPs) are involved in the organisation of microtubules and transportation of vesicles and organelles along the cytoskeletal network; A conserved motif, CAP-Gly, has been identified in a number of CAPs, including CLIP-170 and dynactins. The crystal structure of Caenorhabditis elegans F53F4.3 protein CAP-Gly domain was recently solved. The domain contains three beta-strands. The most conserved sequence, GKNDG, is located in two consecutive sharp turns on the surface, forming the entrance to a groove.
Pssm-ID: 214997 [Multi-domain] Cd Length: 68 Bit Score: 106.13 E-value: 2.77e-27
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359640 61 VGERVWVNGN-KPGFIQFLGETQFAPGQWAGIVLDEP-IGKNDGSVAGVRYFQCEPLRGIFTRPSKLS 126
Cdd:smart01052 1 VGDRVEVGGGgRRGTVRYVGPTPFAPGVWVGVELDEPlRGKNDGSVKGVRYFECPPKHGIFVRPSKVE 68
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
694-1567 |
1.19e-20 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 100.13 E-value: 1.19e-20
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 694 EEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQE--------AEIKKEK-----------FTSAVDGAENAQRAMQETIN 754
Cdd:TIGR02168 175 KETERKLERTRENLDRLEDI-LNELERQLKSLERqaekaeryKELKAELrelelallvlrLEELREELEELQEELKEAEE 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 755 KLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLE 834
Cdd:TIGR02168 254 ELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLD 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 835 QIQLELTKANEKAVQLQKNVEQTaqkaeqsqqetlkthQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYeKETSEMITK 914
Cdd:TIGR02168 334 ELAEELAELEEKLEELKEELESL---------------EAELEELEAELEELESRLEELEEQLETLRSKV-AQLELQIAS 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 915 HDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKslssvLASARKEIELMSDKMRDLISEKETLAQERNT 994
Cdd:TIGR02168 398 LNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAE-----LEELEEELEELQEELERLEEALEELREELEE 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 995 LKLEKESLLSQHLEMESKILLVQQDREELwtknEELNSENKKILKQKEAAEAKSRQESTekvaLISEKSKLLSEIETA-Q 1073
Cdd:TIGR02168 473 AEQALDAAERELAQLQARLDSLERLQENL----EGFSEGVKALLKNQSGLSGILGVLSE----LISVDEGYEAAIEAAlG 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1074 ADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELehyqkLLEENDRVIKDKDDVIqrlqsSYDDLA 1153
Cdd:TIGR02168 545 GRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDRE-----ILKNIEGFLGVAKDLV-----KFDPKL 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1154 RNQRELLQEVSILTAERDSAQE--KDLDLKSTHIALKNEI--DCLLQTNRSLQSEKEMLLKSREelcvsLANTANENQAL 1229
Cdd:TIGR02168 615 RKALSYLLGGVLVVDDLDNALElaKKLRPGYRIVTLDGDLvrPGGVITGGSAKTNSSILERRRE-----IEELEEKIEEL 689
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1230 KLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEkihllQEALFASEQRLLAEREELVNEnk 1309
Cdd:TIGR02168 690 EEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAE-----VEQLEERIAQLSKELTELEAE-- 762
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1310 avtekltkatadavlaETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQ 1389
Cdd:TIGR02168 763 ----------------IEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERL 826
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1390 ELDFSAKRLLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTC 1469
Cdd:TIGR02168 827 ESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELREL 906
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1470 SSDIEILNRERTELQDK-------CQKLTGEVENMKENLTVEKK--ARILDKESFLLE--RMELQNNIGFLEKEVEEMRE 1538
Cdd:TIGR02168 907 ESKRSELRRELEELREKlaqlelrLEGLEVRIDNLQERLSEEYSltLEEAEALENKIEddEEEARRRLKRLENKIKELGP 986
|
890 900 910
....*....|....*....|....*....|....*....
gi 2024359640 1539 KNKEFLTE-------KELLVQEKE---KSETKLEEVIKE 1567
Cdd:TIGR02168 987 VNLAAIEEyeelkerYDFLTAQKEdltEAKETLEEAIEE 1025
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
554-1403 |
1.50e-19 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 96.28 E-value: 1.50e-19
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 554 KEHQREMSSLKEKFESSEE--ALRKEIKTLSASneRMGKENESLKTKLDHANKENSDVIELwKSKLESAIASHQQAMEEL 631
Cdd:TIGR02168 196 NELERQLKSLERQAEKAERykELKAELRELELA--LLVLRLEELREELEELQEELKEAEEE-LEELTAELQELEEKLEEL 272
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 632 KvsfnkgvgaqtAEFAELKTQMEKVKLDYeNEMSNLKLKQENEKSQHLKEIEALKAKLLEVT---EEKEQTLENLKAKLE 708
Cdd:TIGR02168 273 R-----------LEVSELEEEIEELQKEL-YALANEISRLEQQKQILRERLANLERQLEELEaqlEELESKLDELAEELA 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 709 SVEDQHLVEMEDTLNKLQEAEIKKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTvmetKLKERE 788
Cdd:TIGR02168 341 ELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLE----RLEDRR 416
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 789 EREQQLTEA--KVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAE--QS 864
Cdd:TIGR02168 417 ERLQQEIEEllKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDslER 496
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 865 QQETLKTHQEELKkmqdQLTDMKKQMETSQNQYKDL---QAKYEKETsemitkhDADIKGFKQNLL--DAEEALKA--AQ 937
Cdd:TIGR02168 497 LQENLEGFSEGVK----ALLKNQSGLSGILGVLSELisvDEGYEAAI-------EAALGGRLQAVVveNLNAAKKAiaFL 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 938 KKND---------------ELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKE-- 1000
Cdd:TIGR02168 566 KQNElgrvtflpldsikgtEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNALELAKKLRPgy 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1001 --------------SLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLL 1066
Cdd:TIGR02168 646 rivtldgdlvrpggVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELS 725
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1067 SEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAvdvacqkhikEREELEHYQKLLEENDRVIKDKDDVIQRLQ 1146
Cdd:TIGR02168 726 RQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEE----------LEERLEEAEEELAEAEAEIEELEAQIEQLK 795
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1147 SSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANEN 1226
Cdd:TIGR02168 796 EELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESEL 875
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1227 QALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHL------LQEALFASEQRLLAE 1300
Cdd:TIGR02168 876 EALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLevridnLQERLSEEYSLTLEE 955
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1301 REELVNENKAVTEKLTKATADAvlaetafTEKINEL---NLEKESvfskslQFEKHNEallrEKDELERKYSELLDEKKS 1377
Cdd:TIGR02168 956 AEALENKIEDDEEEARRRLKRL-------ENKIKELgpvNLAAIE------EYEELKE----RYDFLTAQKEDLTEAKET 1018
|
890 900
....*....|....*....|....*.
gi 2024359640 1378 LENAFSDMKREQELDFSAKRLLVQEN 1403
Cdd:TIGR02168 1019 LEEAIEEIDREARERFKDTFDQVNEN 1044
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
668-1454 |
1.04e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 93.58 E-value: 1.04e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 668 KLKQENEKSQHLKEI-EALKAKLLEVT----EEKEQTLENLKAKLESVEDQHlVEMEDTLNKLQEA-EIKKEKFTSAVDG 741
Cdd:TIGR02168 204 SLERQAEKAERYKELkAELRELELALLvlrlEELREELEELQEELKEAEEEL-EELTAELQELEEKlEELRLEVSELEEE 282
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 742 AENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMK 821
Cdd:TIGR02168 283 IEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEE 362
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 822 MNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTaqkaeQSQQETLKTHQEELKKMQDQLTDMKKQMEtsqnqyKDLQ 901
Cdd:TIGR02168 363 LEAELEELESRLEELEEQLETLRSKVAQLELQIASL-----NNEIERLEARLERLEDRRERLQQEIEELL------KKLE 431
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 902 AKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDL 981
Cdd:TIGR02168 432 EAELKELQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKAL 511
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 982 ISEKETLAQERNTL----------KLEKESLLSQHLEM------ESKILLVQQDREELWTK----------NEELNSENK 1035
Cdd:TIGR02168 512 LKNQSGLSGILGVLselisvdegyEAAIEAALGGRLQAvvvenlNAAKKAIAFLKQNELGRvtflpldsikGTEIQGNDR 591
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1036 KILKQKE--AAEAKSRQESTEK----VALISEKSKLLSEIETAQADLLK-------ITQENDALRSS----------EST 1092
Cdd:TIGR02168 592 EILKNIEgfLGVAKDLVKFDPKlrkaLSYLLGGVLVVDDLDNALELAKKlrpgyriVTLDGDLVRPGgvitggsaktNSS 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1093 LLQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQssyddlaRNQRELLQEVSILTAERDS 1172
Cdd:TIGR02168 672 ILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELS-------RQISALRKDLARLEAEVEQ 744
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1173 AQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKmtk 1252
Cdd:TIGR02168 745 LEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAAN--- 821
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1253 dnmdlkaslsslsnfleemKSSREASNSEKIHLLQEALFASEQRLLAEREELvnenkavtEKLTKATADAVLAETAFTEK 1332
Cdd:TIGR02168 822 -------------------LRERLESLERRIAATERRLEDLEEQIEELSEDI--------ESLAAEIEELEELIEELESE 874
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1333 INELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQEldfsakRLLVQENTTlkysIEA 1412
Cdd:TIGR02168 875 LEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLE------GLEVRIDNL----QER 944
|
810 820 830 840
....*....|....*....|....*....|....*....|..
gi 2024359640 1413 LEEELkkkNLENQELIACRSDLSDLLKEAQDARRTLENELAA 1454
Cdd:TIGR02168 945 LSEEY---SLTLEEAEALENKIEDDEEEARRRLKRLENKIKE 983
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
694-1388 |
1.12e-18 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 93.46 E-value: 1.12e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 694 EEKEQTLENLKAKLESVEDqHLVEMEDTLNKLQEAeikkekftsavdgAENAQRAmqetiNKLNQKEEQF--ALMSSELE 771
Cdd:COG1196 175 EEAERKLEATEENLERLED-ILGELERQLEPLERQ-------------AEKAERY-----RELKEELKELeaELLLLKLR 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 772 QLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQ 851
Cdd:COG1196 236 ELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELE 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 852 KNVEQtAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKhDADIKGFKQNLLDAEE 931
Cdd:COG1196 316 ERLEE-LEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEA-EEELEELAEELLEALR 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 932 ALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIElmsdkmRDLISEKETLAQERNTLKLEKESLLSQHLEMES 1011
Cdd:COG1196 394 AAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELE------EEEEEEEEALEEAAEEEAELEEEEEALLELLAE 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1012 KILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSES 1091
Cdd:COG1196 468 LLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAA 547
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1092 TLLQQLKELQANKDAVDVAcQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERD 1171
Cdd:COG1196 548 LQNIVVEDDEVAAAAIEYL-KAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRT 626
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1172 SAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMT 1251
Cdd:COG1196 627 LVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEE 706
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1252 KDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNEnKAVTEKLTKATAD-AVLaetaft 1330
Cdd:COG1196 707 RELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDL-EELERELERLEREiEAL------ 779
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359640 1331 EKINELNLEkesvfskslQFEkhneALLREKDELERKYSELLDEKKSLENAFSDMKRE 1388
Cdd:COG1196 780 GPVNLLAIE---------EYE----ELEERYDFLSEQREDLEEARETLEEAIEEIDRE 824
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1229-1945 |
1.74e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 92.81 E-value: 1.74e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1229 LKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSnfleemkssREASNSEKIHLLQEALFASEQRLLA--------E 1300
Cdd:TIGR02168 170 YKERRKETERKLERTRENLDRLEDILNELERQLKSLE---------RQAEKAERYKELKAELRELELALLVlrleelreE 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1301 REELVNENKAVTEKLTKATADAVLAEtaftEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLEN 1380
Cdd:TIGR02168 241 LEELQEELKEAEEELEELTAELQELE----EKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLER 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1381 AFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQ 1460
Cdd:TIGR02168 317 QLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIA 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1461 VLSSSFNTCSSDIEILNRERTELQdkcQKLTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKN 1540
Cdd:TIGR02168 397 SLNNEIERLEARLERLEDRRERLQ---QEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEA 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1541 KEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVT 1620
Cdd:TIGR02168 474 EQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAALGGRLQAVVVE 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1621 EKEK----MELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQTDADFS-------CRLLV------ 1683
Cdd:TIGR02168 554 NLNAakkaIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRkalsyllGGVLVvddldn 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1684 -------------------------------SEGKHELLLE---EMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQT 1729
Cdd:TIGR02168 634 alelakklrpgyrivtldgdlvrpggvitggSAKTNSSILErrrEIEELEEKIEELEEKIAELEKALAELRKELEELEEE 713
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1730 MEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQ 1809
Cdd:TIGR02168 714 LEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQ 793
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1810 KSQQLAALQEENVKLAEELGRSRDEVtshQKLEEERSVLNNQLLEMKKSLpsNTLREStlKKEIDEERASLQKSISDTSA 1889
Cdd:TIGR02168 794 LKEELKALREALDELRAELTLLNEEA---ANLRERLESLERRIAATERRL--EDLEEQ--IEELSEDIESLAAEIEELEE 866
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1890 LITQKDEELEKLRNEITVLRGENASAK----TLQSVVKTLESDKLKLEEKVKNLEQKLKA 1945
Cdd:TIGR02168 867 LIEELESELEALLNERASLEEALALLRseleELSEELRELESKRSELRRELEELREKLAQ 926
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
782-1659 |
6.13e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 90.89 E-value: 6.13e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 782 TKLKER-EEREQQLTEAKVKLE--NDIAEIMKSSGDS-SAQLMKMNDELRLKErQLEQIQLELTKAneKAVQLQKNVEQT 857
Cdd:TIGR02168 168 SKYKERrKETERKLERTRENLDrlEDILNELERQLKSlERQAEKAERYKELKA-ELRELELALLVL--RLEELREELEEL 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 858 AQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSE------MITKHDADIKGFKQNLLDAEE 931
Cdd:TIGR02168 245 QEELKEAEEE-LEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEisrleqQKQILRERLANLERQLEELEA 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 932 ALKAAQKKNDELETQAEELKKQAEQAK----SLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHL 1007
Cdd:TIGR02168 324 QLEELESKLDELAEELAELEEKLEELKeeleSLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIE 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1008 EMESKILLVQQDREELWTKNEELNsenkkilkqKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALR 1087
Cdd:TIGR02168 404 RLEARLERLEDRRERLQQEIEELL---------KKLEEAELKELQAELEELEEELEELQEELERLEEALEELREELEEAE 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1088 SSESTLLQQLKELQANKDAVDVACQKHIKERE---ELEHYQKLLEENDRVIKDKDDVIQR--------LQSSYDDLA-RN 1155
Cdd:TIGR02168 475 QALDAAERELAQLQARLDSLERLQENLEGFSEgvkALLKNQSGLSGILGVLSELISVDEGyeaaieaaLGGRLQAVVvEN 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1156 QRELLQEVSILTAERDS-------AQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQA 1228
Cdd:TIGR02168 555 LNAAKKAIAFLKQNELGrvtflplDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYLLGGVLVVDDLDNA 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1229 LKLRKdEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREasNSEKIHLLQEALFASEQRLLAEREELvnen 1308
Cdd:TIGR02168 635 LELAK-KLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILERRREIEE--LEEKIEELEEKIAELEKALAELRKEL---- 707
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1309 kavtEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKRE 1388
Cdd:TIGR02168 708 ----EELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAE 783
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1389 QEldfsakrllvqentTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNT 1468
Cdd:TIGR02168 784 IE--------------ELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEE 849
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1469 CSSDIEILNRERTELQDKCQKLTGEVENMKEnltvekkarilDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKE 1548
Cdd:TIGR02168 850 LSEDIESLAAEIEELEELIEELESELEALLN-----------ERASLEEALALLRSELEELSEELRELESKRSELRRELE 918
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1549 LLVQEKEKSETKLEEvikekmilyketeqLASKIEQLKSDFTSLsvskaeledvhscVSVMLDELQHKYEVTEKEKMELV 1628
Cdd:TIGR02168 919 ELREKLAQLELRLEG--------------LEVRIDNLQERLSEE-------------YSLTLEEAEALENKIEDDEEEAR 971
|
890 900 910
....*....|....*....|....*....|.
gi 2024359640 1629 QENESLHAEWKSLVIINEEILKEKEKLSKEY 1659
Cdd:TIGR02168 972 RRLKRLENKIKELGPVNLAAIEEYEELKERY 1002
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
408-1271 |
9.84e-18 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 90.50 E-value: 9.84e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 408 EAKMDQLRAMVEAA------DREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLE------HARIKELEQSLL 475
Cdd:TIGR02168 151 EAKPEERRAIFEEAagiskyKERRKETERKLERTRENLDRLEDILNELERQLKSLERQAEKAerykelKAELRELELALL 230
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 476 feKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRL-ESSKHIDDVDTSL-SLLQEISSLQEKMAAAG 553
Cdd:TIGR02168 231 --VLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVsELEEEIEELQKELyALANEISRLEQQKQILR 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 554 KEHQREMSSLKEKFESSEEALRKEIKtLSASNERMGKENESLKTKLDHANKENSDVIELWKSkLESAIASHQQAMEELKV 633
Cdd:TIGR02168 309 ERLANLERQLEELEAQLEELESKLDE-LAEELAELEEKLEELKEELESLEAELEELEAELEE-LESRLEELEEQLETLRS 386
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 634 SFN---KGVGAQTAEFAELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESV 710
Cdd:TIGR02168 387 KVAqleLQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEELERLEEALEEL 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 711 EDQHLV---EMEDTLNKLQEAEIKKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLker 787
Cdd:TIGR02168 467 REELEEaeqALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAAL--- 543
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 788 EEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDelrLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQ- 866
Cdd:TIGR02168 544 GGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDS---IKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSy 620
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 867 --------ETLKTHQEELKKMQDQLTDMKKQMET-----SQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEAL 933
Cdd:TIGR02168 621 llggvlvvDDLDNALELAKKLRPGYRIVTLDGDLvrpggVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKAL 700
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 934 KAAQKKNDELETQAEELKKQAEQA----KSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEM 1009
Cdd:TIGR02168 701 AELRKELEELEEELEQLRKELEELsrqiSALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELAEA 780
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1010 ESKILLVQQDREELwtkneelNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSS 1089
Cdd:TIGR02168 781 EAEIEELEAQIEQL-------KEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSED 853
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1090 ESTLLQQLKELQANKDavdvacqkhiKEREELEHYQKLLEENDRVIKdkddviqRLQSSYDDLARNQRELLQEVSILTAE 1169
Cdd:TIGR02168 854 IESLAAEIEELEELIE----------ELESELEALLNERASLEEALA-------LLRSELEELSEELRELESKRSELRRE 916
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1170 RDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQS-EKEMLLKSREELCVSLANTANENQALKLRKDEM-------QTELE 1241
Cdd:TIGR02168 917 LEELREKLAQLELRLEGLEVRIDNLQERLSEEYSlTLEEAEALENKIEDDEEEARRRLKRLENKIKELgpvnlaaIEEYE 996
|
890 900 910
....*....|....*....|....*....|
gi 2024359640 1242 TEREKLEKMTKDNMDLKASLSSLSNFLEEM 1271
Cdd:TIGR02168 997 ELKERYDFLTAQKEDLTEAKETLEEAIEEI 1026
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
825-1719 |
9.86e-18 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 90.51 E-value: 9.86e-18
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 825 ELRLKERQLEQIQLELTKANEKAVQLQKNVEqtaqKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKY 904
Cdd:TIGR02169 178 ELEEVEENIERLDLIIDEKRQQLERLRRERE----KAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEEL 253
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 905 EKETSEmitkhdadikgfkqnlldAEEALKAAQKKNDELETQAEELKKQAE-QAKSLSSVLASARKEIELMSDKMRDLIS 983
Cdd:TIGR02169 254 EKLTEE------------------ISELEKRLEEIEQLLEELNKKIKDLGEeEQLRVKEKIGELEAEIASLERSIAEKER 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 984 EKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKS 1063
Cdd:TIGR02169 316 ELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1064 KLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELEhyqKLLEENDRVIKDKDDVIQ 1143
Cdd:TIGR02169 396 KLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQE---WKLEQLAADLSKYEQELY 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1144 RLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSRE-ELCVSLANT 1222
Cdd:TIGR02169 473 DLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYATAIEvAAGNRLNNV 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1223 ANENQA--------LKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASE 1294
Cdd:TIGR02169 553 VVEDDAvakeaielLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFAVDLVEFDPKYEPAFKYVFGDTLVVEDIEAA 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1295 QRLLAERE------ELVNENKAVTEKLTKATADAVLAeTAFTEKINELNLEKESVfskslqfEKHNEALLREKDELERKY 1368
Cdd:TIGR02169 633 RRLMGKYRmvtlegELFEKSGAMTGGSRAPRGGILFS-RSEPAELQRLRERLEGL-------KRELSSLQSELRRIENRL 704
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1369 SELLDEKKSLENAFSDMKREQELdfsakrlLVQENTTLKYSIEALEEELKKKNlenQELIACRSDLSDLLKEAQDARRTL 1448
Cdd:TIGR02169 705 DELSQELSDASRKIGEIEKEIEQ-------LEQEEEKLKERLEELEEDLSSLE---QEIENVKSELKELEARIEELEEDL 774
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1449 ENELAAVSHAKQVLSSSFntcssdIEILNRERTELQDKCQKLTGEVENMKenltvekkaRILDKESFLLErmelqnnigF 1528
Cdd:TIGR02169 775 HKLEEALNDLEARLSHSR------IPEIQAELSKLEEEVSRIEARLREIE---------QKLNRLTLEKE---------Y 830
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1529 LEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSV 1608
Cdd:TIGR02169 831 LEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEA 910
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1609 MLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINEEIL------KEKEKLSKEYYKLhEKVVALLEQTDADFSCRLL 1682
Cdd:TIGR02169 911 QIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELsledvqAELQRVEEEIRAL-EPVNMLAIQEYEEVLKRLD 989
|
890 900 910
....*....|....*....|....*....|....*..
gi 2024359640 1683 VSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEA 1719
Cdd:TIGR02169 990 ELKEKRAKLEEERKAILERIEEYEKKKREVFMEAFEA 1026
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
403-1103 |
1.68e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 89.73 E-value: 1.68e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 403 HVLEMEAKMDQLRAMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKAD 482
Cdd:TIGR02168 233 RLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLA 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 483 KLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLESSKhiDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSS 562
Cdd:TIGR02168 313 NLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLE--AELEELEAELEELESRLEELEEQLETLRSKVAQ 390
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 563 LKEKFESSE---EALRKEIKTLSASNERMGKENESLKTKLDHANKE----NSDVIELWKSKLESAIASHQQAMEELKVSF 635
Cdd:TIGR02168 391 LELQIASLNneiERLEARLERLEDRRERLQQEIEELLKKLEEAELKelqaELEELEEELEELQEELERLEEALEELREEL 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 636 NKGVGAQTA---EFAELKTQMEKVKLDYENEMSNLKLKQENEKSQH-LKEIEALKAKLLEVTEEKEQTLEN-LKAKLESV 710
Cdd:TIGR02168 471 EEAEQALDAaerELAQLQARLDSLERLQENLEGFSEGVKALLKNQSgLSGILGVLSELISVDEGYEAAIEAaLGGRLQAV 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 711 EDQHLVEMEDTLNKLQEAEIKKEKFTSAVDGAENAQRAMQETINKlnqKEEQFALMSSELEQLKSNL----------TVM 780
Cdd:TIGR02168 551 VVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILK---NIEGFLGVAKDLVKFDPKLrkalsyllggVLV 627
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 781 ETKLKEREEREQQLT--EAKVKLENDIAeimKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTA 858
Cdd:TIGR02168 628 VDDLDNALELAKKLRpgYRIVTLDGDLV---RPGGVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELR 704
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 859 QKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEmITKHDADIKGFKQNLLDAEEALKAAQK 938
Cdd:TIGR02168 705 KELEELEEE-LEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKE-LTELEAEIEELEERLEEAEEELAEAEA 782
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 939 KNDELETQAEELKkqaEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQ 1018
Cdd:TIGR02168 783 EIEELEAQIEQLK---EELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAA 859
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1019 DREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLK 1098
Cdd:TIGR02168 860 EIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRID 939
|
....*
gi 2024359640 1099 ELQAN 1103
Cdd:TIGR02168 940 NLQER 944
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
942-1796 |
1.72e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 89.73 E-value: 1.72e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 942 ELETQAEELKKQAEQA---KSLSSVLASARKEIELMS-----DKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKI 1013
Cdd:TIGR02168 197 ELERQLKSLERQAEKAeryKELKAELRELELALLVLRleelrEELEELQEELKEAEEELEELTAELQELEEKLEELRLEV 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1014 LLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQestekvalisekskLLSEIETAQADLLKITQENDALRSSESTL 1093
Cdd:TIGR02168 277 SELEEEIEELQKELYALANEISRLEQQKQILRERLAN--------------LERQLEELEAQLEELESKLDELAEELAEL 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1094 LQQLKELQANKDAvdvacqkhikEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLaRNQRELLQevsiltaerdsa 1173
Cdd:TIGR02168 343 EEKLEELKEELES----------LEAELEELEAELEELESRLEELEEQLETLRSKVAQL-ELQIASLN------------ 399
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1174 qekdldlksthialkNEIDCLLQTNRSLQSEKEMLLKSREELcvslantanENQALKLRKDEMQTELETEREKLEKMTKD 1253
Cdd:TIGR02168 400 ---------------NEIERLEARLERLEDRRERLQQEIEEL---------LKKLEEAELKELQAELEELEEELEELQEE 455
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1254 NMDLKASLSSLSNFLEEMKSSREASNSEKIHLlqEALFASEQRLLAEREELVNENKAVT-EKLTKATADAVLAETAFTEk 1332
Cdd:TIGR02168 456 LERLEEALEELREELEEAEQALDAAERELAQL--QARLDSLERLQENLEGFSEGVKALLkNQSGLSGILGVLSELISVD- 532
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1333 iNELNLEKESVFSKSLQfekhneALLREKDELERKYSELLDEKKSLENAFS--DMKREQELDFSAKRLLVQENTTLKYSI 1410
Cdd:TIGR02168 533 -EGYEAAIEAALGGRLQ------AVVVENLNAAKKAIAFLKQNELGRVTFLplDSIKGTEIQGNDREILKNIEGFLGVAK 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1411 EALEEELKKKNLENQELIACRsdLSDLLKEAQDARRTLENELAAVSHAKQVLSSSF-------NTCSSD------IEILN 1477
Cdd:TIGR02168 606 DLVKFDPKLRKALSYLLGGVL--VVDDLDNALELAKKLRPGYRIVTLDGDLVRPGGvitggsaKTNSSIlerrreIEELE 683
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1478 RERTELQDKCQKLTGEVENMKENLT-VEKKARILDKESFLLERM--ELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEK 1554
Cdd:TIGR02168 684 EKIEELEEKIAELEKALAELRKELEeLEEELEQLRKELEELSRQisALRKDLARLEAEVEQLEERIAQLSKELTELEAEI 763
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1555 EKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESL 1634
Cdd:TIGR02168 764 EELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDL 843
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1635 HAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQTDAdfscrllvSEGKHELLLEEMSNLALKLREIERlqaqtfm 1714
Cdd:TIGR02168 844 EEQIEELSEDIESLAAEIEELEELIEELESELEALLNERAS--------LEEALALLRSELEELSEELRELES------- 908
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1715 QKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLensrqtNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVE 1794
Cdd:TIGR02168 909 KRSELRRELEELREKLAQLELRLEGLEVRIDNLQERL------SEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIK 982
|
..
gi 2024359640 1795 EL 1796
Cdd:TIGR02168 983 EL 984
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
345-1078 |
1.84e-16 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 86.35 E-value: 1.84e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 345 ARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQelalVRDGHDRHVLEMEAKMDQLRAMVEAAdRE 424
Cdd:PTZ00121 1242 AKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEE----KKKADEAKKAEEKKKADEAKKKAEEA-KK 1316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 425 KVELLNQLEEEKRKVEDLQFRVEEEsitKGDLETQTKLEHARIKELEQSLlfEKTKADKLQRELEDTRVATV----SEKS 500
Cdd:PTZ00121 1317 ADEAKKKAEEAKKKADAAKKKAEEA---KKAAEAAKAEAEAAADEAEAAE--EKAEAAEKKKEEAKKKADAAkkkaEEKK 1391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 501 RIMELERDLALRVKEVAELRGRLESSKHIDDVDTSLSLLQEISSLQEKMAAAGK--------EHQREMSSLKEKFESSEE 572
Cdd:PTZ00121 1392 KADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKadeakkkaEEAKKAEEAKKKAEEAKK 1471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 573 ALRKEIKTLSASN-ERMGKENESLKTKLDHANKENsdviELWKSKLESAIASHQQAMEELKvsfnKGVGAQTAEfaELKT 651
Cdd:PTZ00121 1472 ADEAKKKAEEAKKaDEAKKKAEEAKKKADEAKKAA----EAKKKADEAKKAEEAKKADEAK----KAEEAKKAD--EAKK 1541
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 652 QMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIK 731
Cdd:PTZ00121 1542 AEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIK 1621
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 732 KEKFTSAVDgaenaqraMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLEND---IAEI 808
Cdd:PTZ00121 1622 AEELKKAEE--------EKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDekkAAEA 1693
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 809 MKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQEtlktHQEELKKMQDQLTDMKK 888
Cdd:PTZ00121 1694 LKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKD----EEEKKKIAHLKKEEEKK 1769
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 889 QMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKK-NDELETQAEELKkqaEQAKSLSSVLASA 967
Cdd:PTZ00121 1770 AEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFANIIEGGKEGNLViNDSKEMEDSAIK---EVADSKNMQLEEA 1846
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 968 rKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAK 1047
Cdd:PTZ00121 1847 -DAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEKIDKDDIEREIPNNNMAGKNNDIIDDKLDKDEYI 1925
|
730 740 750
....*....|....*....|....*....|...
gi 2024359640 1048 SR--QESTEKVALISEKSKLLSEIETAQADLLK 1078
Cdd:PTZ00121 1926 KRdaEETREEIIKISKKDMCINDFSSKFCDYMK 1958
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
406-1155 |
2.40e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 85.88 E-value: 2.40e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 406 EMEAKMDQLRAMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQ 485
Cdd:TIGR02168 250 EAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELE 329
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 486 RELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLESSKhiddvdtslSLLQEISSLQEKMAAAGKEHQREMSSLKE 565
Cdd:TIGR02168 330 SKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELE---------SRLEELEEQLETLRSKVAQLELQIASLNN 400
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 566 KFESseeaLRKEIKTLSASNERMGKENESLKTKLDHANKE----NSDVIELWKSKLESAIASHQQAMEELKVSFNKGVGA 641
Cdd:TIGR02168 401 EIER----LEARLERLEDRRERLQQEIEELLKKLEEAELKelqaELEELEEELEELQEELERLEEALEELREELEEAEQA 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 642 QTA---EFAELKTQMEKVKLDYENEMSNLKLKQENEKSQH-LKEIEALKAKLLEVTEEKEQTLEN--------------- 702
Cdd:TIGR02168 477 LDAaerELAQLQARLDSLERLQENLEGFSEGVKALLKNQSgLSGILGVLSELISVDEGYEAAIEAalggrlqavvvenln 556
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 703 --------LK-----------------AKLESVEDQHLVEMEDTLNKLQEAEIKKEKFTSAVDG-------AENAQRAMQ 750
Cdd:TIGR02168 557 aakkaiafLKqnelgrvtflpldsikgTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSYllggvlvVDDLDNALE 636
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 751 ------------------------------ETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVK 800
Cdd:TIGR02168 637 lakklrpgyrivtldgdlvrpggvitggsaKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQ 716
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 801 LENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTaqkaeqsqQETLKTHQEELKKMQ 880
Cdd:TIGR02168 717 LRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEA--------EEELAEAEAEIEELE 788
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 881 DQLTDMKKQMETSQNQYKDLQAKYEKEtsemitkhdadikgfKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAK-- 958
Cdd:TIGR02168 789 AQIEQLKEELKALREALDELRAELTLL---------------NEEAANLRERLESLERRIAATERRLEDLEEQIEELSed 853
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 959 --SLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNsENKK 1036
Cdd:TIGR02168 854 ieSLAAEIEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLE-LRLE 932
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1037 ILKQKEA--AEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDvacqkh 1114
Cdd:TIGR02168 933 GLEVRIDnlQERLSEEYSLTLEEAEALENKIEDDEEEARRRLKRLENKIKELGPVNLAAIEEYEELKERYDFLT------ 1006
|
810 820 830 840
....*....|....*....|....*....|....*....|..
gi 2024359640 1115 iKEREELEHYQKLLEEndrVIKDKDDVI-QRLQSSYDDLARN 1155
Cdd:TIGR02168 1007 -AQKEDLTEAKETLEE---AIEEIDREArERFKDTFDQVNEN 1044
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
912-1805 |
2.49e-16 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 85.89 E-value: 2.49e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 912 ITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAkslssvlasarkeielmsDKMRDLISEKEtlaqe 991
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKA------------------ERYQALLKEKR----- 221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 992 rntlKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEkskllsEIET 1071
Cdd:TIGR02169 222 ----EYEGYELLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEE------EQLR 291
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1072 AQADLLKITQENDALRSSESTLLQQLKELQAnkdavdvacqKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDD 1151
Cdd:TIGR02169 292 VKEKIGELEAEIASLERSIAEKERELEDAEE----------RLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAE 361
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1152 LARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKL 1231
Cdd:TIGR02169 362 LKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEE 441
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1232 RKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMkssreasnSEKIHLLQEALFASEQRLLAEREElVNENKAV 1311
Cdd:TIGR02169 442 EKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRV--------EKELSKLQRELAEAEAQARASEER-VRGGRAV 512
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1312 TE--------------KLTKATADAVLA-ETAFTEKINELNLEKESVFSKSLQFEKHNEA-----LLREKDELERKYSEL 1371
Cdd:TIGR02169 513 EEvlkasiqgvhgtvaQLGSVGERYATAiEVAAGNRLNNVVVEDDAVAKEAIELLKRRKAgratfLPLNKMRDERRDLSI 592
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1372 LDEKKSLENAFSDMKREQEldFSAKRLLVQENTTLKYSIEAleeelKKKNLENQELIACRSDL----------SDLLKEA 1441
Cdd:TIGR02169 593 LSEDGVIGFAVDLVEFDPK--YEPAFKYVFGDTLVVEDIEA-----ARRLMGKYRMVTLEGELfeksgamtggSRAPRGG 665
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1442 QDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTvekkaRILDKESFLLERME 1521
Cdd:TIGR02169 666 ILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIE-----QLEQEEEKLKERLE 740
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1522 -LQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVikEKMILYKETEQLASKIEQLKSDFTSLSVSKAELE 1600
Cdd:TIGR02169 741 eLEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDL--EARLSHSRIPEIQAELSKLEEEVSRIEARLREIE 818
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1601 dvhscvsVMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALleqtdadfscr 1680
Cdd:TIGR02169 819 -------QKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDL----------- 880
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1681 llvsEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIH------QEKIETLASLENS 1754
Cdd:TIGR02169 881 ----ESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEdpkgedEEIPEEELSLEDV 956
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|.
gi 2024359640 1755 RQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKL 1805
Cdd:TIGR02169 957 QAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILE 1007
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
357-1122 |
1.47e-15 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 83.19 E-value: 1.47e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 357 ALKEKQQHIEQ--LLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEAADREKVELLNQLEE 434
Cdd:TIGR02169 215 ALLKEKREYEGyeLLKEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 435 E-----------KRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIM 503
Cdd:TIGR02169 295 KigeleaeiaslERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELE 374
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 504 ELERDLALRVKEVAELRGRLESSKH-IDDVDTSLSLLQEissLQEKMAAAGKEHQREMSSLKEK---FESSEEALRKEIK 579
Cdd:TIGR02169 375 EVDKEFAETRDELKDYREKLEKLKReINELKRELDRLQE---ELQRLSEELADLNAAIAGIEAKineLEEEKEDKALEIK 451
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 580 -------TLSASNERMGKENESLKTKLDHANKENSDVielwKSKLESAIASHQQ---------AMEELKVSFNKGVGAQT 643
Cdd:TIGR02169 452 kqewkleQLAADLSKYEQELYDLKEEYDRVEKELSKL----QRELAEAEAQARAseervrggrAVEEVLKASIQGVHGTV 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 644 AEFAELKTQMEK-VKLDYENEMSNLKLKQEN---EKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQ--HLVE 717
Cdd:TIGR02169 528 AQLGSVGERYATaIEVAAGNRLNNVVVEDDAvakEAIELLKRRKAGRATFLPLNKMRDERRDLSILSEDGVIGFavDLVE 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 718 MEDtlnKLQEAEIKKEKFTSAVDGAENAQRAMQE----TIN-KLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQ 792
Cdd:TIGR02169 608 FDP---KYEPAFKYVFGDTLVVEDIEAARRLMGKyrmvTLEgELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLE 684
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 793 QLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQEtLKTH 872
Cdd:TIGR02169 685 GLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSE-LKEL 763
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 873 QEELKKMQDQLTDMKKQMEtsqnqykDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKK 952
Cdd:TIGR02169 764 EARIEELEEDLHKLEEALN-------DLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQ 836
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 953 QAE-QAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELwtkNEELN 1031
Cdd:TIGR02169 837 ELQeQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEEL---EAQIE 913
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1032 SENKKILKQKEAAEAKSRQEST--EKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDV 1109
Cdd:TIGR02169 914 KKRKRLSELKAKLEALEEELSEieDPKGEDEEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKE 993
|
810
....*....|...
gi 2024359640 1110 ACQKHIKEREELE 1122
Cdd:TIGR02169 994 KRAKLEEERKAIL 1006
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
708-1575 |
8.61e-15 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 80.79 E-value: 8.61e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 708 ESVEDQHLVEMEDTLNKLQEAEIKKEKFTSAVDGAENaqramQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKER 787
Cdd:pfam02463 161 EAAGSRLKRKKKEALKKLIEETENLAELIIDLEELKL-----QELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLN 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 788 EEREQQLTEakvKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQtAQKAEQSQQE 867
Cdd:pfam02463 236 EERIDLLQE---LLRDEQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSE-LLKLERRKVD 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 868 TLKTHQEELKKMQdqltdmKKQMETSQNQ-YKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQ 946
Cdd:pfam02463 312 DEEKLKESEKEKK------KAEKELKKEKeEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLESER 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 947 AEELKKQAEQAKSL-------SSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQD 1019
Cdd:pfam02463 386 LSSAAKLKEEELELkseeekeAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDEL 465
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1020 REELWTKNEELNSENKKILKQKEAAEAKSRQESTEKvaliSEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKE 1099
Cdd:pfam02463 466 ELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQK----ESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENY 541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1100 LQANKDAVDVACQKHIKEREELEHYQKLLEENDR-------VIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDS 1172
Cdd:pfam02463 542 KVAISTAVIVEVSATADEVEERQKLVRALTELPLgarklrlLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKR 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1173 AQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTK 1252
Cdd:pfam02463 622 AKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEI 701
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1253 DNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEK 1332
Cdd:pfam02463 702 KKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEERE 781
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1333 INELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEA 1412
Cdd:pfam02463 782 KTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEE 861
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1413 LEEELKKKNLENQ-ELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLT 1491
Cdd:pfam02463 862 EITKEELLQELLLkEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELL 941
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1492 GEVENMKENLTVEKKARILDKESFLLERMELQNNigfLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMIL 1571
Cdd:pfam02463 942 LEEADEKEKEENNKEEEEERNKRLLLAKEELGKV---NLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQR 1018
|
....
gi 2024359640 1572 YKET 1575
Cdd:pfam02463 1019 LKEF 1022
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
691-1547 |
9.51e-15 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 80.50 E-value: 9.51e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 691 EVTEEKEQTLENLKAKLESVEDQHLVEME--DTLNKLQEAEIKKEKFTSAVDgaENAQRAMQETINKLNQKEEQFALMSS 768
Cdd:TIGR02169 167 EFDRKKEKALEELEEVEENIERLDLIIDEkrQQLERLRREREKAERYQALLK--EKREYEGYELLKEKEALERQKEAIER 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 769 ELEQLKSNLTVMEtklKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLmkmndelrlkERQLEQIQLELTKANEKAV 848
Cdd:TIGR02169 245 QLASLEEELEKLT---EEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRV----------KEKIGELEAEIASLERSIA 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 849 QLQKNVEQtAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEmITKHDADIKGFKQNLLD 928
Cdd:TIGR02169 312 EKERELED-AEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAE-LEEVDKEFAETRDELKD 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 929 AEEALKAAQKKNDELETqaeELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLE 1008
Cdd:TIGR02169 390 YREKLEKLKREINELKR---ELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSK 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1009 MESKILLVQQDREELWTKNEELNSEnkkiLKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDAlrS 1088
Cdd:TIGR02169 467 YEQELYDLKEEYDRVEKELSKLQRE----LAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQLGSVGERYAT--A 540
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1089 SESTLLQQLKELQANKDAVDVACQKHIKERE----------ELEHYQKLLE--ENDRVIKDKDDVIQrlqssYDDLARN- 1155
Cdd:TIGR02169 541 IEVAAGNRLNNVVVEDDAVAKEAIELLKRRKagratflplnKMRDERRDLSilSEDGVIGFAVDLVE-----FDPKYEPa 615
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1156 ----------------QRELLQEVSILTAERD-----------------------SAQEKDLDLKSTHIALKNEIDCLLQ 1196
Cdd:TIGR02169 616 fkyvfgdtlvvedieaARRLMGKYRMVTLEGElfeksgamtggsraprggilfsrSEPAELQRLRERLEGLKRELSSLQS 695
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1197 TNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKssre 1276
Cdd:TIGR02169 696 ELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELE---- 771
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1277 asnsEKIHLLQEALFASEQRLLAER-----------EELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFS 1345
Cdd:TIGR02169 772 ----EDLHKLEEALNDLEARLSHSRipeiqaelsklEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKE 847
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1346 KSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREqeldfsakrllvqenttlkysIEALEEELKKKNLENQ 1425
Cdd:TIGR02169 848 QIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKE---------------------RDELEAQLRELERKIE 906
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1426 ELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSfNTCSSDIEILNRERTELQDKCQKLtGEVeNMKEnltvek 1505
Cdd:TIGR02169 907 ELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEI-PEEELSLEDVQAELQRVEEEIRAL-EPV-NMLA------ 977
|
890 900 910 920
....*....|....*....|....*....|....*....|..
gi 2024359640 1506 karILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEK 1547
Cdd:TIGR02169 978 ---IQEYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKK 1016
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1083-1876 |
1.17e-14 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.49 E-value: 1.17e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1083 NDALRSSESTLL-QQLKELQANKDAVDVACQKHIKEREELehyQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQ 1161
Cdd:TIGR02168 219 KAELRELELALLvLRLEELREELEELQEELKEAEEELEEL---TAELQELEEKLEELRLEVSELEEEIEELQKELYALAN 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1162 EVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELE 1241
Cdd:TIGR02168 296 EISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLE 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1242 TEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREEL---VNENKAVTEKLTKA 1318
Cdd:TIGR02168 376 ELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELqaeLEELEEELEELQEE 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1319 TADAVLAETAFTEKINELNLEKESVFSK--SLQFEKHN-EALLREKDELERKYSELLDEKKSLENAFS--------DMKR 1387
Cdd:TIGR02168 456 LERLEEALEELREELEEAEQALDAAERElaQLQARLDSlERLQENLEGFSEGVKALLKNQSGLSGILGvlselisvDEGY 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1388 EQELDF----SAKRLLVQENTTLKYSIEALEEELKKK------------------NLENQELIACRSDLSDLLKEAQDAR 1445
Cdd:TIGR02168 536 EAAIEAalggRLQAVVVENLNAAKKAIAFLKQNELGRvtflpldsikgteiqgndREILKNIEGFLGVAKDLVKFDPKLR 615
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1446 RTLENELAAVshakqVLSSSFNTCSSDIEILNRERT------ELQDKCQKLTGEVENmKENLTVEKKARILDKESfllER 1519
Cdd:TIGR02168 616 KALSYLLGGV-----LVVDDLDNALELAKKLRPGYRivtldgDLVRPGGVITGGSAK-TNSSILERRREIEELEE---KI 686
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1520 MELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAEL 1599
Cdd:TIGR02168 687 EELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEEL 766
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1600 EDvhscvsvMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKvVALLEQTDADFSC 1679
Cdd:TIGR02168 767 EE-------RLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRER-LESLERRIAATER 838
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1680 RLLVSEGKHELLLEEMSNLALKLRE----IERLQAQT------FMQKFEADKRAEEVLQTMEKVTKEKDaihQEKIETLA 1749
Cdd:TIGR02168 839 RLEDLEEQIEELSEDIESLAAEIEEleelIEELESELeallneRASLEEALALLRSELEELSEELRELE---SKRSELRR 915
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1750 SLENSRQTNEKLQNELDMLKQNNLKNEEELTkSKELLNLENKKVEELKKEFEALKLAAAQKS--QQLAALQEENVKLAEE 1827
Cdd:TIGR02168 916 ELEELREKLAQLELRLEGLEVRIDNLQERLS-EEYSLTLEEAEALENKIEDDEEEARRRLKRleNKIKELGPVNLAAIEE 994
|
810 820 830 840
....*....|....*....|....*....|....*....|....*....
gi 2024359640 1828 LgrsrdevtshQKLEEERSVLNNQLLEMKKSLpsNTLRESTlkKEIDEE 1876
Cdd:TIGR02168 995 Y----------EELKERYDFLTAQKEDLTEAK--ETLEEAI--EEIDRE 1029
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
353-952 |
1.56e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 79.60 E-value: 1.56e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 353 ALQEALKEKQqhIEQLLAERDLERAEVAKATSHVGEIEQELAlvrdghdrhvlemeakmdQLRAMVEAADREKVELLNQL 432
Cdd:COG1196 217 ELKEELKELE--AELLLLKLRELEAELEELEAELEELEAELE------------------ELEAELAELEAELEELRLEL 276
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 433 EEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALR 512
Cdd:COG1196 277 EELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEA 356
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 513 VKEVAELRGRLEsskhiddvdtslSLLQEISSLQEKMAAAGKEHQREMSSLKEKfESSEEALRKEIKTLSASNERMGKEN 592
Cdd:COG1196 357 EAELAEAEEALL------------EAEAELAEAEEELEELAEELLEALRAAAEL-AAQLEELEEAEEALLERLERLEEEL 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 593 ESLKTKLDHANKEnSDVIELWKSKLESAIASHQQAMEELKVSfnkgVGAQTAEFAELKTQMEKVKLDYENEMSNLKLKQE 672
Cdd:COG1196 424 EELEEALAELEEE-EEEEEEALEEAAEEEAELEEEEEALLEL----LAELLEEAALLEAALAELLEELAEAAARLLLLLE 498
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 673 NEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVED----------QHLVEMEDTLNKLQEAEIKKEKFTSAVDGA 742
Cdd:COG1196 499 AEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAaleaalaaalQNIVVEDDEVAAAAIEYLKAAKAGRATFLP 578
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 743 ENAQRAMQETINKLNQKEEQFALMSSELEQLKSNL-----------TVMETKLKEREEREQQLTEAKVKLENDIAEIMKS 811
Cdd:COG1196 579 LDKIRARAALAAALARGAIGAAVDLVASDLREADAryyvlgdtllgRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSA 658
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 812 SGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQME 891
Cdd:COG1196 659 GGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELL 738
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024359640 892 TSQNQYKDLQAKYEKETSEMITKHDA---DIKGFKQNL-------LDAEEALKAAQKKNDELETQAEELKK 952
Cdd:COG1196 739 EELLEEEELLEEEALEELPEPPDLEElerELERLEREIealgpvnLLAIEEYEELEERYDFLSEQREDLEE 809
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
416-1175 |
4.46e-14 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 78.57 E-value: 4.46e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 416 AMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQ--TKLEH----ARIKELEQSLLFEKTKADKLQRELE 489
Cdd:TIGR02169 163 AGVAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREreKAERYqallKEKREYEGYELLKEKEALERQKEAI 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 490 DTRVATVSEKsrIMELERDLALRVKEVAELRGRLES-SKHIDDV--DTSLSLLQEISSLQEKMA------AAGKEHQREM 560
Cdd:TIGR02169 243 ERQLASLEEE--LEKLTEEISELEKRLEEIEQLLEElNKKIKDLgeEEQLRVKEKIGELEAEIAslersiAEKERELEDA 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 561 SSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLdhanKENSDVIELWKSKLESAIASHQQAMEELKvSFNKGVG 640
Cdd:TIGR02169 321 EERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEY----AELKEELEDLRAELEEVDKEFAETRDELK-DYREKLE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 641 AQTAEFAELKTQMEKV---KLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVtEEKEQTLENLKAKLESVEDQH--- 714
Cdd:TIGR02169 396 KLKREINELKRELDRLqeeLQRLSEELADLNAAIAGIEAKINELEEEKEDKALEI-KKQEWKLEQLAADLSKYEQELydl 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 715 ---LVEMEDTLNKLQEAEIKKEKFTSAVDGAENAQRAMQE-----------TINKLNQKEEQFALMSSELEQLKSNLTVM 780
Cdd:TIGR02169 475 keeYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEvlkasiqgvhgTVAQLGSVGERYATAIEVAAGNRLNNVVV 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 781 ETK---------LKER---------------EEREQQ-------------LTEAKVKLENDIAEIMKSSG-----DSSAQ 818
Cdd:TIGR02169 555 EDDavakeaielLKRRkagratflplnkmrdERRDLSilsedgvigfavdLVEFDPKYEPAFKYVFGDTLvvediEAARR 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 819 LM------KMNDELRLKE-------RQLEQIQLELTKANEKAVQLQKNVEQTaQKAEQSQQETLKTHQEELKKMQDQLTD 885
Cdd:TIGR02169 635 LMgkyrmvTLEGELFEKSgamtggsRAPRGGILFSRSEPAELQRLRERLEGL-KRELSSLQSELRRIENRLDELSQELSD 713
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 886 MKKQMETSQNQYKDLQAKYEKEtSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAE--QAKSLSSV 963
Cdd:TIGR02169 714 ASRKIGEIEKEIEQLEQEEEKL-KERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNdlEARLSHSR 792
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 964 LASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEA 1043
Cdd:TIGR02169 793 IPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEE 872
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1044 AEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELEH 1123
Cdd:TIGR02169 873 LEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELS 952
|
810 820 830 840 850
....*....|....*....|....*....|....*....|....*....|....*
gi 2024359640 1124 YQKLLEENDRV---IKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQE 1175
Cdd:TIGR02169 953 LEDVQAELQRVeeeIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILE 1007
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
926-1453 |
8.98e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 77.28 E-value: 8.98e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 926 LLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSS--------------VLASARKEIELMSDKMRDLISEKETLAQE 991
Cdd:COG1196 224 ELEAELLLLKLRELEAELEELEAELEELEAELEELEAelaeleaeleelrlELEELELELEEAQAEEYELLAELARLEQD 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 992 RNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIET 1071
Cdd:COG1196 304 IARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEE 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1072 AQADLLKITQENDALRSSESTLLQQLKELQANKDAVDvacQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDD 1151
Cdd:COG1196 384 LAEELLEALRAAAELAAQLEELEEAEEALLERLERLE---EELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEA 460
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1152 LARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKL 1231
Cdd:COG1196 461 LLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAAL 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1232 RKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQE----ALFASEQRLLAEREELVNE 1307
Cdd:COG1196 541 EAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIgaavDLVASDLREADARYYVLGD 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1308 NKAV----TEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFS 1383
Cdd:COG1196 621 TLLGrtlvAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALL 700
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1384 DMKREQELDFSAKRLLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELA 1453
Cdd:COG1196 701 AEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELE 770
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
353-892 |
2.36e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 75.74 E-value: 2.36e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 353 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDG---HDRHVLEMEAKMDQLRAMVEAADREKVELL 429
Cdd:COG1196 243 ELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEeyeLLAELARLEQDIARLEERRRELEERLEELE 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 430 NQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDL 509
Cdd:COG1196 323 EELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQL 402
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 510 ALRVKEVAELRGRLE-----------------------SSKHIDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEK 566
Cdd:COG1196 403 EELEEAEEALLERLErleeeleeleealaeleeeeeeeEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAEL 482
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 567 FESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENS---DVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQT 643
Cdd:COG1196 483 LEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAgavAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAA 562
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 644 AEFAeLKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENlkAKLESVEDQHLVEMEDTLN 723
Cdd:COG1196 563 IEYL-KAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGD--TLLGRTLVAARLEAALRRA 639
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 724 KLQEAEIkKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLEN 803
Cdd:COG1196 640 VTLAGRL-REVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLE 718
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 804 DIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQK----------AEQSQQETlkthQ 873
Cdd:COG1196 719 EELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREiealgpvnllAIEEYEEL----E 794
|
570
....*....|....*....
gi 2024359640 874 EELKKMQDQLTDMKKQMET 892
Cdd:COG1196 795 ERYDFLSEQREDLEEARET 813
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1234-2001 |
3.54e-13 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 75.49 E-value: 3.54e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1234 DEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREasNSEKIHLLQEALFASEQRLLA-EREELVNENKAVT 1312
Cdd:TIGR02169 166 AEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRRERE--KAERYQALLKEKREYEGYELLkEKEALERQKEAIE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1313 EKLtkATADAVLAEtaFTEKINELNLEKESVFSKSLQFEKHNEALLR-EKDELERKYSELLDEKKSLENAFSDMKREQEL 1391
Cdd:TIGR02169 244 RQL--ASLEEELEK--LTEEISELEKRLEEIEQLLEELNKKIKDLGEeEQLRVKEKIGELEAEIASLERSIAEKERELED 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1392 DFSAKRLLVQENTTLKYSIEALEEELKKKNLEnqeliacRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSS 1471
Cdd:TIGR02169 320 AEERLAKLEAEIDKLLAEIEELEREIEEERKR-------RDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYRE 392
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1472 DIEILNRERTE-------LQDKCQKLTGEVENMKENLTVeKKARILDKESfllERMELQNNIGFLEKEVEEMREKNKEFL 1544
Cdd:TIGR02169 393 KLEKLKREINElkreldrLQEELQRLSEELADLNAAIAG-IEAKINELEE---EKEDKALEIKKQEWKLEQLAADLSKYE 468
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1545 TEKELLVQEKEKSETKLEEVIKEkmILYKETEQLASKIEQLKSDFTSLsVSKAELEDVHSCVSvMLDELQHKY------- 1617
Cdd:TIGR02169 469 QELYDLKEEYDRVEKELSKLQRE--LAEAEAQARASEERVRGGRAVEE-VLKASIQGVHGTVA-QLGSVGERYataieva 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1618 ------------EVTEKEKMELVQENESLHAEWKSLVIINEEiLKEKEKLSK-----------EYYKLHEKVVA------ 1668
Cdd:TIGR02169 545 agnrlnnvvvedDAVAKEAIELLKRRKAGRATFLPLNKMRDE-RRDLSILSEdgvigfavdlvEFDPKYEPAFKyvfgdt 623
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1669 -LLEQTDAD----FSCRLLVSEGKhelLLEE---MSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAI 1740
Cdd:TIGR02169 624 lVVEDIEAArrlmGKYRMVTLEGE---LFEKsgaMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRI 700
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1741 HQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEE 1820
Cdd:TIGR02169 701 ENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEA 780
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1821 NVKLAEELGRSR-DEVTSH-QKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEI----------DEERASLQKSISDTS 1888
Cdd:TIGR02169 781 LNDLEARLSHSRiPEIQAElSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIqelqeqridlKEQIKSIEKEIENLN 860
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1889 ALITQKDEELEKLRNEITVLRGEnasAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSGDIAANLLQDE 1968
Cdd:TIGR02169 861 GKKEELEEELEELEAALRDLESR---LGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIE 937
|
810 820 830
....*....|....*....|....*....|...
gi 2024359640 1969 SAEDKQQEIDFLNSVIVDLQRRNEELNLKIQRM 2001
Cdd:TIGR02169 938 DPKGEDEEIPEEELSLEDVQAELQRVEEEIRAL 970
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
641-1253 |
8.32e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 74.20 E-value: 8.32e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 641 AQTAE-FAELKTQMEKVKLD-YENEMSNLKLKQENEKSQhLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEM 718
Cdd:COG1196 209 AEKAErYRELKEELKELEAElLLLKLRELEAELEELEAE-LEELEAELEELEAELAELEAELEELRLELEELELELEEAQ 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 719 EDTLNKLQEAEIKKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAK 798
Cdd:COG1196 288 AEEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEAL 367
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 799 VKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKK 878
Cdd:COG1196 368 LEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEA 447
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 879 MQDQLTDmKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKgfkqnlLDAEEALKAAQKKNDELETQAEELKKQAEQAK 958
Cdd:COG1196 448 AEEEAEL-EEEEEALLELLAELLEEAALLEAALAELLEELAE------AAARLLLLLEAEADYEGFLEGVKAALLLAGLR 520
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 959 SLSSVLASARK---------EIELMSDKMRDLISEKETLAQERNTLKLEKE-----------------SLLSQHLEMESK 1012
Cdd:COG1196 521 GLAGAVAVLIGveaayeaalEAALAAALQNIVVEDDEVAAAAIEYLKAAKAgratflpldkiraraalAAALARGAIGAA 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1013 ILLVQQDREELwtknEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSEST 1092
Cdd:COG1196 601 VDLVASDLREA----DARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLE 676
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1093 LLQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRviKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDS 1172
Cdd:COG1196 677 AEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERL--EEELEEEALEEQLEAEREELLEELLEEEELLEEEALE 754
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1173 AQEKDLDLKsthiALKNEIdcllqtnRSLQSEKEML----LKSREELcvslantanenQALKLRKDEMQTE---LETERE 1245
Cdd:COG1196 755 ELPEPPDLE----ELEREL-------ERLEREIEALgpvnLLAIEEY-----------EELEERYDFLSEQredLEEARE 812
|
....*...
gi 2024359640 1246 KLEKMTKD 1253
Cdd:COG1196 813 TLEEAIEE 820
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
1018-1940 |
1.83e-12 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 73.16 E-value: 1.83e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1018 QDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQL 1097
Cdd:TIGR00606 206 QMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDN 285
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1098 KELQANKDAVDVACQKHIKEREEleHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSI--LTAERDSAQE 1175
Cdd:TIGR00606 286 SELELKMEKVFQGTDEQLNDLYH--NHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRlqLQADRHQEHI 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1176 KDLDLKSTHIALKNEIDCLLQ---TNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTK 1252
Cdd:TIGR00606 364 RARDSLIQSLATRLELDGFERgpfSERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIE 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1253 DNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEK 1332
Cdd:TIGR00606 444 LKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQE 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1333 INELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDE------KKSLENAFSDMKREQ---ELDFSAKRLLVQEN 1403
Cdd:TIGR00606 524 MEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLlgyfpnKKQLEDWLHSKSKEInqtRDRLAKLNKELASL 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1404 TTLKYSIEALEEELKKKNLENQELI-------ACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEIL 1476
Cdd:TIGR00606 604 EQNKNHINNELESKEEQLSSYEDKLfdvcgsqDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVC 683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1477 NR------ERTELQDKCQKLTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELL 1550
Cdd:TIGR00606 684 QRvfqteaELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRL 763
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1551 VQEKEKSETKLEEVIKEkmilyketEQLAskiEQLKSDFTSLSVSKAELEDVhscvsvmldelqhkyevtEKEKMELVQE 1630
Cdd:TIGR00606 764 KNDIEEQETLLGTIMPE--------EESA---KVCLTDVTIMERFQMELKDV------------------ERKIAQQAAK 814
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1631 NESLhaewkSLVIINEEILKEKEKLSKEYYKLHEKVvALLEQTDADFSCRLLVSEGKHELLLEEMSNLALKLREIERLQA 1710
Cdd:TIGR00606 815 LQGS-----DLDRTVQQVNQEKQEKQHELDTVVSKI-ELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQRRQQFEE 888
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1711 QTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNnLKNEEELTKSKELLNLEN 1790
Cdd:TIGR00606 889 QLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEK-VKNIHGYMKDIENKIQDG 967
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1791 KKVEELKKEFEALKLAAaqksqQLAALQEENVKLAEELGRSRDEVTSHQKLEeerSVLNNQLLEMKkslpsntlRESTLK 1870
Cdd:TIGR00606 968 KDDYLKQKETELNTVNA-----QLEECEKHQEKINEDMRLMRQDIDTQKIQE---RWLQDNLTLRK--------RENELK 1031
|
890 900 910 920 930 940 950
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1871 kEIDEERASLQKSISDTSalITQKDEELEKLRNEITVLRGENASAKTLQsvvKTLESDKLKLEEKVKNLE 1940
Cdd:TIGR00606 1032 -EVEEELKQHLKEMGQMQ--VLQMKQEHQKLEENIDLIKRNHVLALGRQ---KGYEKEIKHFKKELREPQ 1095
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
423-998 |
1.88e-12 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 72.79 E-value: 1.88e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 423 REKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQ---RELEDTRvATVSEK 499
Cdd:PRK03918 217 PELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEELEekvKELKELK-EKAEEY 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 500 SRIMELERDLALRVKEVAELRGRLESskHIDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIK 579
Cdd:PRK03918 296 IKLSEFYEEYLDELREIEKRLSRLEE--EINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEE 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 580 TLSASNERMGKENESLKTKLDHANKENSDvIELWKSKLESAIASHQQAMEELKVSFNKgvgaqtAEFAELKTQMEKVKLD 659
Cdd:PRK03918 374 LERLKKRLTGLTPEKLEKELEELEKAKEE-IEEEISKITARIGELKKEIKELKKAIEE------LKKAKGKCPVCGRELT 446
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 660 YENEmsnlklkqENEKSQHLKEIEALKAKLLEvTEEKEQTLENLKAKLESV--EDQHLVEMEDTLNKLQEAEIKKEKFts 737
Cdd:PRK03918 447 EEHR--------KELLEEYTAELKRIEKELKE-IEEKERKLRKELRELEKVlkKESELIKLKELAEQLKELEEKLKKY-- 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 738 avdgaenaqramqeTINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSA 817
Cdd:PRK03918 516 --------------NLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEE 581
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 818 QLMKMNDELRLKERQLEQIQLELTKAnekavqlqknveQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQY 897
Cdd:PRK03918 582 LGFESVEELEERLKELEPFYNEYLEL------------KDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKEL 649
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 898 KDLQAKYEKETSEMItkhdadikgfKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDK 977
Cdd:PRK03918 650 EELEKKYSEEEYEEL----------REEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEKA 719
|
570 580
....*....|....*....|.
gi 2024359640 978 MRDLISEKETLAQERNTLKLE 998
Cdd:PRK03918 720 LERVEELREKVKKYKALLKER 740
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
376-728 |
4.29e-12 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 72.01 E-value: 4.29e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 376 RAEVAKATSHVGEIEQELALVRDGHDrhvlEMEAKMDQLRAMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGD 455
Cdd:TIGR02168 683 EEKIEELEEKIAELEKALAELRKELE----ELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTE 758
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 456 LETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLESS-KHIDDVDT 534
Cdd:TIGR02168 759 LEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLeRRIAATER 838
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 535 SLS-LLQEISSLQEKMAAAGKEhQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELw 613
Cdd:TIGR02168 839 RLEdLEEQIEELSEDIESLAAE-IEELEELIEELESELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRE- 916
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 614 KSKLESAIASHQQAMEELKVsfnkgvgaqtaEFAELKTQ-MEKVKLDYEN--EMSNLKLKQENEKSQHLKEIEALKAKLL 690
Cdd:TIGR02168 917 LEELREKLAQLELRLEGLEV-----------RIDNLQERlSEEYSLTLEEaeALENKIEDDEEEARRRLKRLENKIKELG 985
|
330 340 350
....*....|....*....|....*....|....*...
gi 2024359640 691 EVTEEKEQTLENLKAKLESVEDQHlVEMEDTLNKLQEA 728
Cdd:TIGR02168 986 PVNLAAIEEYEELKERYDFLTAQK-EDLTEAKETLEEA 1022
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
215-275 |
4.64e-12 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 71.25 E-value: 4.64e-12
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024359640 215 LKIGDRVLVGGTKaGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQPRYGLF 275
Cdd:COG5244 4 LSVNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIF 63
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
941-1719 |
4.92e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 71.51 E-value: 4.92e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 941 DELETQAEELKKQAEQA---KSLSSVLAsaRKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQ 1017
Cdd:COG1196 196 GELERQLEPLERQAEKAeryRELKEELK--ELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELR 273
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1018 QDREELwtkNEELNSenkkilKQKEAAEAKSRQESTEKvalisEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQL 1097
Cdd:COG1196 274 LELEEL---ELELEE------AQAEEYELLAELARLEQ-----DIARLEERRRELEERLEELEEELAELEEELEELEEEL 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1098 KELQANKDAvdvacqkhikEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKD 1177
Cdd:COG1196 340 EELEEELEE----------AEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAE 409
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1178 LDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELcvslANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDL 1257
Cdd:COG1196 410 EALLERLERLEEELEELEEALAELEEEEEEEEEALEEA----AEEEAELEEEEEALLELLAELLEEAALLEAALAELLEE 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1258 KASLSSLSNFLEEMKSSREAsnsekihllqealFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELN 1337
Cdd:COG1196 486 LAEAAARLLLLLEAEADYEG-------------FLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIV 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1338 LEKESVFSKSLQFEKHNEALLREKDELERkyselLDEKKSLENAFSDMKREQELDFsakrllvqenttlkysIEALEEEL 1417
Cdd:COG1196 553 VEDDEVAAAAIEYLKAAKAGRATFLPLDK-----IRARAALAAALARGAIGAAVDL----------------VASDLREA 611
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1418 KKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVShakqvlsssfntcssdieilnRERTELQDKCQKLTGEVENM 1497
Cdd:COG1196 612 DARYYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVT---------------------LEGEGGSAGGSLTGGSRREL 670
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1498 KENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQ 1577
Cdd:COG1196 671 LAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEE 750
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1578 LASKIEQLKSDFTSLsvsKAELEdvhscvsvmldelqhkyevtekekmELVQENESLHAewkslviINEEILKEKEKLSK 1657
Cdd:COG1196 751 EALEELPEPPDLEEL---ERELE-------------------------RLEREIEALGP-------VNLLAIEEYEELEE 795
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024359640 1658 EYyklhekvVALLEQtdadfscrllvsegkHELLLEEMSNLALKLREIERLQAQTFMQKFEA 1719
Cdd:COG1196 796 RY-------DFLSEQ---------------REDLEEARETLEEAIEEIDRETRERFLETFDA 835
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
410-1100 |
5.48e-12 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 71.54 E-value: 5.48e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 410 KMDQLRAMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGD-LETQTKLEhariKELEQSLLFEKTKADKLQREL 488
Cdd:TIGR00618 174 PLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHErKQVLEKEL----KHLREALQQTQQSHAYLTQKR 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 489 EDTRVATVSEK--SRIMELERDLALRVKEVAELRGRLESSKHIDDVDTSLSLLQEI--------SSLQEKMAAAGKEHQR 558
Cdd:TIGR00618 250 EAQEEQLKKQQllKQLRARIEELRAQEAVLEETQERINRARKAAPLAAHIKAVTQIeqqaqrihTELQSKMRSRAKLLMK 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 559 EMSSLKEkfESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDV--IELWKSKLESAIASHQQAMEELKVSFN 636
Cdd:TIGR00618 330 RAAHVKQ--QSSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTqhIHTLQQQKTTLTQKLQSLCKELDILQR 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 637 KG--VGAQTAEFAELKTQMEKVKLDYENEMSNLKLKQE--NEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVED 712
Cdd:TIGR00618 408 EQatIDTRTSAFRDLQGQLAHAKKQQELQQRYAELCAAaiTCTAQCEKLEKIHLQESAQSLKEREQQLQTKEQIHLQETR 487
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 713 QHLVEmEDTLNKLQEAEIKKEKFTS-------AVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTvmetKLK 785
Cdd:TIGR00618 488 KKAVV-LARLLELQEEPCPLCGSCIhpnparqDIDNPGPLTRRMQRGEQTYAQLETSEEDVYHQLTSERKQRA----SLK 562
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 786 EREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMND-ELRLKERQLEQIQLELTKANEKAVQLQKNVEQtAQKAEQS 864
Cdd:TIGR00618 563 EQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEkLSEAEDMLACEQHALLRKLQPEQDLQDVRLHL-QQCSQEL 641
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 865 QQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDL-QAKYEKETSEmitkhdadikgfKQNLLDAEEALKAAQKKNDEL 943
Cdd:TIGR00618 642 ALKLTALHALQLTLTQERVREHALSIRVLPKELLASrQLALQKMQSE------------KEQLTYWKEMLAQCQTLLREL 709
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 944 ETQAEELKKQAEQaksLSSVLASARKEIELMSDKMRDLISEKE----------TLAQERNTLKLEKESLLSQHL-----E 1008
Cdd:TIGR00618 710 ETHIEEYDREFNE---IENASSSLGSDLAAREDALNQSLKELMhqartvlkarTEAHFNNNEEVTAALQTGAELshlaaE 786
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1009 MESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRS 1088
Cdd:TIGR00618 787 IQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQ 866
|
730
....*....|..
gi 2024359640 1089 SESTLLQQLKEL 1100
Cdd:TIGR00618 867 EQAKIIQLSDKL 878
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
565-1355 |
9.37e-12 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 70.87 E-value: 9.37e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 565 EKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELWKSKLE------SAIASHQQAMEELKVSFNKG 638
Cdd:TIGR02169 166 AEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAERYQALLKEkreyegYELLKEKEALERQKEAIERQ 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 639 VGAQTAEFAELKTQMEKVKLDYENemSNLKLKQENEKSQHLKEIE--ALKAKLLEVTEEKEQTLENLKAKLEsvedqhlv 716
Cdd:TIGR02169 246 LASLEEELEKLTEEISELEKRLEE--IEQLLEELNKKIKDLGEEEqlRVKEKIGELEAEIASLERSIAEKER-------- 315
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 717 EMEDTLNKLQEAEIKKEKFTSAVDGAENAQRAMQ----ETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQ 792
Cdd:TIGR02169 316 ELEDAEERLAKLEAEIDKLLAEIEELEREIEEERkrrdKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 793 QLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTh 872
Cdd:TIGR02169 396 KLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDL- 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 873 QEELKKMQDQLTDMKKQMETSQNQYKDLQ--AKYEKETSEMITKHDADIKGFKQNLLDAEEA------------LKAAQK 938
Cdd:TIGR02169 475 KEEYDRVEKELSKLQRELAEAEAQARASEerVRGGRAVEEVLKASIQGVHGTVAQLGSVGERyataievaagnrLNNVVV 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 939 KNDELETQAEELKKQaEQAKSLSSV----LASARKEIELMSDK-----------------------------MRDLISEK 985
Cdd:TIGR02169 555 EDDAVAKEAIELLKR-RKAGRATFLplnkMRDERRDLSILSEDgvigfavdlvefdpkyepafkyvfgdtlvVEDIEAAR 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 986 ETLAQER----------------------NTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEA 1043
Cdd:TIGR02169 634 RLMGKYRmvtlegelfeksgamtggsrapRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSD 713
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1044 AEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKhIKEREELEH 1123
Cdd:TIGR02169 714 ASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALND-LEARLSHSR 792
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1124 YQKLLEENDRVikdkDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQS 1203
Cdd:TIGR02169 793 IPEIQAELSKL----EEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEE 868
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1204 EKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEM-KSSREASNSEK 1282
Cdd:TIGR02169 869 ELEELEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIeDPKGEDEEIPE 948
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1283 IHLLQEALFASEQRLLAEREEL--VNeNKAVTE-KLTKATAD------AVLAE--TAFTEKINELNLEKESVFSKSlqFE 1351
Cdd:TIGR02169 949 EELSLEDVQAELQRVEEEIRALepVN-MLAIQEyEEVLKRLDelkekrAKLEEerKAILERIEEYEKKKREVFMEA--FE 1025
|
....
gi 2024359640 1352 KHNE 1355
Cdd:TIGR02169 1026 AINE 1029
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
358-880 |
1.56e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 70.15 E-value: 1.56e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 358 LKEKQQHIEQLLAERDLE----RAEVAKATSHVGEIEQELALVRDG-------HDRHVLEMEAKMDQLRAMVEAADREKV 426
Cdd:pfam15921 262 LQQHQDRIEQLISEHEVEitglTEKASSARSQANSIQSQLEIIQEQarnqnsmYMRQLSDLESTVSQLRSELREAKRMYE 341
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 427 ELLNQLEEEK--RKVEDLQFRVEEESITK--GDLETQTKLEHARIKELEQSLLFEKTK--------------ADKLQREL 488
Cdd:pfam15921 342 DKIEELEKQLvlANSELTEARTERDQFSQesGNLDDQLQKLLADLHKREKELSLEKEQnkrlwdrdtgnsitIDHLRREL 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 489 EDtrvatvseksRIMELERDLALRVKEVAELRGRLEssKHIDDVDTSLSLLQEISSLQEKMAAAgKEHQR----EMSSLK 564
Cdd:pfam15921 422 DD----------RNMEVQRLEALLKAMKSECQGQME--RQMAAIQGKNESLEKVSSLTAQLEST-KEMLRkvveELTAKK 488
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 565 EKFESSE-----------------EALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIEL-----WKSKLESAIA 622
Cdd:pfam15921 489 MTLESSErtvsdltaslqekeraiEATNAEITKLRSRVDLKLQELQHLKNEGDHLRNVQTECEALklqmaEKDKVIEILR 568
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 623 SHQQAMEELKVSFNKGVGAQTAEFAELKTQMEKVKLDYEnEMSNLKLKQE---NEKSQHLKEIEALKAKLL--------- 690
Cdd:pfam15921 569 QQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLELQ-EFKILKDKKDakiRELEARVSDLELEKVKLVnagserlra 647
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 691 --EVTEEKEQTLENLK---AKLESVEDQHLVEMEDTLNKLQEAEIKKEKFTSAVdgaENAQRAMQETINKLNQKE----- 760
Cdd:pfam15921 648 vkDIKQERDQLLNEVKtsrNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQL---KSAQSELEQTRNTLKSMEgsdgh 724
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 761 ---------EQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLmkmnDELRLKER 831
Cdd:pfam15921 725 amkvamgmqKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKMAGEL----EVLRSQER 800
|
570 580 590 600
....*....|....*....|....*....|....*....|....*....
gi 2024359640 832 QLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQ 880
Cdd:pfam15921 801 RLKEKVANMEVALDKASLQFAECQDIIQRQEQESVRLKLQHTLDVKELQ 849
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
353-902 |
1.95e-11 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 69.68 E-value: 1.95e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 353 ALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlvrdghdrHVLEMEAKMDQLRAMVEAADREKVELLNQL 432
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERRE--------ELETLEAEIEDLRETIAETEREREELAEEV 281
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 433 EEEKRKVEDLQFRVEeesitkgDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRV---ATVSEKSRIMELERDL 509
Cdd:PRK02224 282 RDLRERLEELEEERD-------DLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVaaqAHNEEAESLREDADDL 354
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 510 ALRVKEVAELRGRLESS-----KHIDDVDTSLSLL-QEISSLQEKMAAAGKEHQrEMSSLKEKFESSEEALRKEIKTLSA 583
Cdd:PRK02224 355 EERAEELREEAAELESEleearEAVEDRREEIEELeEEIEELRERFGDAPVDLG-NAEDFLEELREERDELREREAELEA 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 584 SNERMGKENESLKTKLDhANKENSDVIELWKSKLESAIASHQQAMEELkvsfnkgvgaqTAEFAELKTQMEKVKLDYENE 663
Cdd:PRK02224 434 TLRTARERVEEAEALLE-AGKCPECGQPVEGSPHVETIEEDRERVEEL-----------EAELEDLEEEVEEVEERLERA 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 664 MSNLKLKQENEKSQHLKE-IEALKAKLLEVTEEKEQTLENLKAKLESVEDqhlvEMEDTLNKLQEAEIKKEKFTSAVDGA 742
Cdd:PRK02224 502 EDLVEAEDRIERLEERREdLEELIAERRETIEEKRERAEELRERAAELEA----EAEEKREAAAEAEEEAEEAREEVAEL 577
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 743 ENAQRAMQETINKLNQKEEQFALMS---SELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEimkssgdssAQL 819
Cdd:PRK02224 578 NSKLAELKERIESLERIRTLLAAIAdaeDEIERLREKREALAELNDERRERLAEKRERKRELEAEFDE---------ARI 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 820 MKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVeqTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKD 899
Cdd:PRK02224 649 EEAREDKERAEEYLEQVEEKLDELREERDDLQAEI--GAVENELEELEELRERREALENRVEALEALYDEAEELESMYGD 726
|
...
gi 2024359640 900 LQA 902
Cdd:PRK02224 727 LRA 729
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
1229-1907 |
4.72e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 68.61 E-value: 4.72e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1229 LKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSRE---ASNSEKIHLLQEALFASEQRLLAEREELV 1305
Cdd:pfam15921 115 LQTKLQEMQMERDAMADIRRRESQSQEDLRNQLQNTVHELEAAKCLKEdmlEDSNTQIEQLRKMMLSHEGVLQEIRSILV 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1306 NENKAVTEKLTKATADAVL----AETAFTEKINELNLEKESVFSKSLQFEKHNEALlreKDELERKYSELLDEKKS-LEN 1380
Cdd:pfam15921 195 DFEEASGKKIYEHDSMSTMhfrsLGSAISKILRELDTEISYLKGRIFPVEDQLEAL---KSESQNKIELLLQQHQDrIEQ 271
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1381 AFSDMKRE-QELDFSAKRLLVQENTtLKYSIEALEEELKKKN-LENQELIACRSDLSDLLKEAQDARRTLENELAAVSHA 1458
Cdd:pfam15921 272 LISEHEVEiTGLTEKASSARSQANS-IQSQLEIIQEQARNQNsMYMRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQ 350
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1459 KQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTVEKKA-------------------RILDKESFLLER 1519
Cdd:pfam15921 351 LVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQnkrlwdrdtgnsitidhlrRELDDRNMEVQR 430
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1520 MEL------QNNIGFLEKEVEEMREKNKEFLTEKELLVQ---EKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFT 1590
Cdd:pfam15921 431 LEAllkamkSECQGQMERQMAAIQGKNESLEKVSSLTAQlesTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKER 510
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1591 SLSVSKAELEDVHSCVSVMLDELQHKYevTEKEKMELVQ---ENESLHAEWKSLVIineEILKEKEKLSKEYYKLHEKVV 1667
Cdd:pfam15921 511 AIEATNAEITKLRSRVDLKLQELQHLK--NEGDHLRNVQtecEALKLQMAEKDKVI---EILRQQIENMTQLVGQHGRTA 585
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1668 ALLEQTDADFSCRLlvseGKHELLLEEMSNLA----LKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIhqe 1743
Cdd:pfam15921 586 GAMQVEKAQLEKEI----NDRRLELQEFKILKdkkdAKIRELEARVSDLELEKVKLVNAGSERLRAVKDIKQERDQL--- 658
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1744 kietLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVE-ELKK-----------EFEALKLAAAQKS 1811
Cdd:pfam15921 659 ----LNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKMQLKSAQsELEQtrntlksmegsDGHAMKVAMGMQK 734
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1812 Q------QLAALQEENVKLAEELGRSRDEvtsHQKLEEERSVLNNQL-------------LEMKKSlPSNTLRESTLKKE 1872
Cdd:pfam15921 735 QitakrgQIDALQSKIQFLEEAMTNANKE---KHFLKEEKNKLSQELstvateknkmageLEVLRS-QERRLKEKVANME 810
|
730 740 750
....*....|....*....|....*....|....*
gi 2024359640 1873 IDEERASLQksISDTSALITQKDEELEKLRNEITV 1907
Cdd:pfam15921 811 VALDKASLQ--FAECQDIIQRQEQESVRLKLQHTL 843
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1649-1948 |
7.57e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 67.65 E-value: 7.57e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1649 LKEKEKLSKEYYKLHEKVVALLEQTDAdfscrllvsEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQ 1728
Cdd:COG1196 218 LKEELKELEAELLLLKLRELEAELEEL---------EAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQA 288
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1729 TMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAA 1808
Cdd:COG1196 289 EEYELLAELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALL 368
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1809 QKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTS 1888
Cdd:COG1196 369 EAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAA 448
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1889 ALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSE 1948
Cdd:COG1196 449 EEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLE 508
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
362-1120 |
8.17e-11 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 67.84 E-value: 8.17e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 362 QQHIEQLLAERDLERAEVAKATSHVGEI-EQELALVRdghdRHVLEMEAKMDQLR----AMVEAADRE---KVELLNQLE 433
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNELhEKQKFYLR----QSVIDLQTKLQEMQmerdAMADIRRREsqsQEDLRNQLQ 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 434 EEKRKVED---LQFRVEEESITKGDLETQTKLEHARIKELEQSLL--FEKTKADKLQRELEDTRVATVSEKSRIMELERD 508
Cdd:pfam15921 149 NTVHELEAakcLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILvdFEEASGKKIYEHDSMSTMHFRSLGSAISKILRE 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 509 LAlrvKEVAELRGR-------LESSKHIDDVDTSLSLLQEisslQEKMAAAGKEHQREMSSLKEK----------FESSE 571
Cdd:pfam15921 229 LD---TEISYLKGRifpvedqLEALKSESQNKIELLLQQH----QDRIEQLISEHEVEITGLTEKassarsqansIQSQL 301
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 572 EALRKEIKTLSASNERMGKENES----LKTKLDHANKENSDVIELWKSKLESAIASHQQAMEElKVSFNKgvgaqtaEFA 647
Cdd:pfam15921 302 EIIQEQARNQNSMYMRQLSDLEStvsqLRSELREAKRMYEDKIEELEKQLVLANSELTEARTE-RDQFSQ-------ESG 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 648 ELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKE------IEALKAKLlevtEEKEQTLENLKAKLESVEDQHLVEMEDT 721
Cdd:pfam15921 374 NLDDQLQKLLADLHKREKELSLEKEQNKRLWDRDtgnsitIDHLRREL----DDRNMEVQRLEALLKAMKSECQGQMERQ 449
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 722 LNKLQEAEIKKEKFTSAVDGAENAQRAMQETINKLNQKeeQFALMSSEleQLKSNLTV-METKLKEREEREQQLTEAKVK 800
Cdd:pfam15921 450 MAAIQGKNESLEKVSSLTAQLESTKEMLRKVVEELTAK--KMTLESSE--RTVSDLTAsLQEKERAIEATNAEITKLRSR 525
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 801 LENDIAEIMkssgdssaQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQsQQETLKTHQEELKKMQ 880
Cdd:pfam15921 526 VDLKLQELQ--------HLKNEGDHLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQLVGQ-HGRTAGAMQVEKAQLE 596
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 881 DQLTDMKKQMEtsqnQYKDLQAKYEKETSEMITKHdADIKGFKQNLLDA-EEALKAA----QKKN---DELETQAEELKK 952
Cdd:pfam15921 597 KEINDRRLELQ----EFKILKDKKDAKIRELEARV-SDLELEKVKLVNAgSERLRAVkdikQERDqllNEVKTSRNELNS 671
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 953 QAEQAKSLSSVLASARKEIELMSDKMR-DLISEKETLAQERNTLKlekesllSQHLEMESKILLVQQDREELWTKNEELN 1031
Cdd:pfam15921 672 LSEDYEVLKRNFRNKSEEMETTTNKLKmQLKSAQSELEQTRNTLK-------SMEGSDGHAMKVAMGMQKQITAKRGQID 744
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1032 SENKKILKQKEAAEAKSRqestEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVA- 1110
Cdd:pfam15921 745 ALQSKIQFLEEAMTNANK----EKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLKEKVANMEVALDKASLQf 820
|
810
....*....|..
gi 2024359640 1111 --CQKHIKEREE 1120
Cdd:pfam15921 821 aeCQDIIQRQEQ 832
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
732-1549 |
1.50e-10 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 66.68 E-value: 1.50e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 732 KEKFTSAVDGAENAQRAMQETINKLNQ-KEEQFALMSSELEQLKSNLTVMETK------LKEREEREQQltEAKVKLEND 804
Cdd:pfam15921 73 KEHIERVLEEYSHQVKDLQRRLNESNElHEKQKFYLRQSVIDLQTKLQEMQMErdamadIRRRESQSQE--DLRNQLQNT 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 805 IAEI----------MKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQ-QETLKTHQ 873
Cdd:pfam15921 151 VHELeaakclkedmLEDSNTQIEQLRKMMLSHEGVLQEIRSILVDFEEASGKKIYEHDSMSTMHFRSLGSAiSKILRELD 230
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 874 EELKKMQDQLTDMKKQMET----SQNQYKDLQAKYEKETSEMITKHDADIKGFKqnlldaeEALKAAQKKNDELETQAEE 949
Cdd:pfam15921 231 TEISYLKGRIFPVEDQLEAlkseSQNKIELLLQQHQDRIEQLISEHEVEITGLT-------EKASSARSQANSIQSQLEI 303
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 950 LKKQAEQAKSLSsvlasarkeielmsdkMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEE 1029
Cdd:pfam15921 304 IQEQARNQNSMY----------------MRQLSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQ 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1030 LNSENKKILKQKEAAEAKSRQESTEkVALISEKSKLLSEIETAQADLLkitqenDALRSSESTLLQQLKELQANKDAVDV 1109
Cdd:pfam15921 368 FSQESGNLDDQLQKLLADLHKREKE-LSLEKEQNKRLWDRDTGNSITI------DHLRRELDDRNMEVQRLEALLKAMKS 440
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1110 ACQKHIKER--------EELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQREllqeVSILTAerdSAQEKDLDLK 1181
Cdd:pfam15921 441 ECQGQMERQmaaiqgknESLEKVSSLTAQLESTKEMLRKVVEELTAKKMTLESSERT----VSDLTA---SLQEKERAIE 513
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1182 STH---IALKNEIDCLLQTNRSLQSEKEmllksreelcvSLANTANENQALKLRKDEMQTELETEREKLEKMTKdnmdlk 1258
Cdd:pfam15921 514 ATNaeiTKLRSRVDLKLQELQHLKNEGD-----------HLRNVQTECEALKLQMAEKDKVIEILRQQIENMTQ------ 576
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1259 aslsslsnFLEEMKSSREASNSEKIHLLQEalfASEQRLlaEREELvnenkavteKLTKATADAVLAEtaFTEKINELNL 1338
Cdd:pfam15921 577 --------LVGQHGRTAGAMQVEKAQLEKE---INDRRL--ELQEF---------KILKDKKDAKIRE--LEARVSDLEL 632
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1339 EKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKR-----EQELDFSAKRL----------LVQEN 1403
Cdd:pfam15921 633 EKVKLVNAGSERLRAVKDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRnfrnkSEEMETTTNKLkmqlksaqseLEQTR 712
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1404 TTLKySIEALEEELKKKNLENQELIACRSDLSDLLkeaQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTEL 1483
Cdd:pfam15921 713 NTLK-SMEGSDGHAMKVAMGMQKQITAKRGQIDAL---QSKIQFLEEAMTNANKEKHFLKEEKNKLSQELSTVATEKNKM 788
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359640 1484 QDKCQKLTGEVENMKENLTVEKKAriLDKESflLERMELQNNIGflEKEVEEMREKNKEFLTEKEL 1549
Cdd:pfam15921 789 AGELEVLRSQERRLKEKVANMEVA--LDKAS--LQFAECQDIIQ--RQEQESVRLKLQHTLDVKEL 848
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
652-1421 |
1.68e-10 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 66.70 E-value: 1.68e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 652 QMEKVKLDY-ENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEI 730
Cdd:PTZ00121 1068 QDEGLKPSYkDFDFDAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARK 1147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 731 KKE-KFTSAVDGAENAQRAmqetinklnqKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEA-KVKLENDIAEI 808
Cdd:PTZ00121 1148 AEDaKRVEIARKAEDARKA----------EEARKAEDAKKAEAARKAEEVRKAEELRKAEDARKAEAArKAEEERKAEEA 1217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 809 MKSSGDSSAQLMKMNDELRLKE----RQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDqlt 884
Cdd:PTZ00121 1218 RKAEDAKKAEAVKKAEEAKKDAeeakKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADE--- 1294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 885 dMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVL 964
Cdd:PTZ00121 1295 -AKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKK 1373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 965 ASARKEIELMSDKMRDLISEKEtlAQERNTLKLEKESLLSQHLEMESKILLVQQDREELwTKNEELnseNKKILKQKEAA 1044
Cdd:PTZ00121 1374 EEAKKKADAAKKKAEEKKKADE--AKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEK-KKADEA---KKKAEEAKKAD 1447
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1045 EAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTllqQLKELQANKDAVDVACQKHIKEREELEHY 1124
Cdd:PTZ00121 1448 EAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEA---KKKADEAKKAAEAKKKADEAKKAEEAKKA 1524
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1125 QKLLEENDRviKDKDDVIQRLQSSYDDLARNQREL--LQEVSILTAERDSAQEKDLDLKSTHIALKNEidcllqtnrslq 1202
Cdd:PTZ00121 1525 DEAKKAEEA--KKADEAKKAEEKKKADELKKAEELkkAEEKKKAEEAKKAEEDKNMALRKAEEAKKAE------------ 1590
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1203 sekemllKSREELCVSLANTANENQALKLRKDemqtelETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEK 1282
Cdd:PTZ00121 1591 -------EARIEEVMKLYEEEKKMKAEEAKKA------EEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEE 1657
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1283 IHLLQealfASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKD 1362
Cdd:PTZ00121 1658 ENKIK----AAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAE 1733
|
730 740 750 760 770
....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359640 1363 ELERKYSElldEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELKKKN 1421
Cdd:PTZ00121 1734 EAKKEAEE---DKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEED 1789
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
755-1270 |
2.13e-10 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 66.20 E-value: 2.13e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 755 KLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDEL---RLKER 831
Cdd:TIGR04523 132 QKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLsnlKKKIQ 211
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 832 QLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKdlqakyekETSEM 911
Cdd:TIGR04523 212 KNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTE-ISNTQTQLNQLKDEQNKIKKQLSEKQKELE--------QNNKK 282
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 912 ITKHDADIKGFKQNLLDAEEalkaaQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQE 991
Cdd:TIGR04523 283 IKELEKQLNQLKSEISDLNN-----QKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESE 357
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 992 RNTLKLEKEsllsqhlEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIET 1071
Cdd:TIGR04523 358 NSEKQRELE-------EKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIER 430
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1072 AQADLLKITQENDALRSSESTLLQQLKELQANKDA----VDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQS 1147
Cdd:TIGR04523 431 LKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESletqLKVLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEE 510
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1148 SYDDLARNQRELLQEVSILTAERDSAQEKDLDLKS---------THIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVS 1218
Cdd:TIGR04523 511 KVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDelnkddfelKKENLEKEIDEKNKEIEELKQTQKSLKKKQEEKQEL 590
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 2024359640 1219 LANTANENQALK---LRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEE 1270
Cdd:TIGR04523 591 IDQKEKEKKDLIkeiEEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQ 645
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
625-1377 |
2.34e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 66.24 E-value: 2.34e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 625 QQAMEELKVsfnkgVGAQTAEF----AELKTQMEKVKLDYENEMSNLKL---KQENEKSQHLKEIEALKAKLLEVT---E 694
Cdd:TIGR02169 173 EKALEELEE-----VEENIERLdliiDEKRQQLERLRREREKAERYQALlkeKREYEGYELLKEKEALERQKEAIErqlA 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 695 EKEQTLENLKAKLESVED------QHLVEMEDTLNKLQEAEIK--KEKFTSAVDGAENAQRAMQETINKLNQKEEQFALM 766
Cdd:TIGR02169 248 SLEEELEKLTEEISELEKrleeieQLLEELNKKIKDLGEEEQLrvKEKIGELEAEIASLERSIAEKERELEDAEERLAKL 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 767 SSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEK 846
Cdd:TIGR02169 328 EAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRE 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 847 AVQLQKNVEQTAQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEmitkhdadIKGFKQNL 926
Cdd:TIGR02169 408 LDRLQEELQRLSEELADLNAA-IAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQE--------LYDLKEEY 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 927 LDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLAS---------------------------------------- 966
Cdd:TIGR02169 479 DRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKAsiqgvhgtvaqlgsvgeryataievaagnrlnnvvvedda 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 967 -ARKEIELMSD------------KMRDLISEKETLAQER------NTLKLEKE-----------SLLSQHLEMESKILlv 1016
Cdd:TIGR02169 559 vAKEAIELLKRrkagratflplnKMRDERRDLSILSEDGvigfavDLVEFDPKyepafkyvfgdTLVVEDIEAARRLM-- 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1017 qqDREELWTKNEELNSENKKIL---KQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTL 1093
Cdd:TIGR02169 637 --GKYRMVTLEGELFEKSGAMTggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDA 714
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1094 LQQLKELQANKDAVDvacQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARN------------QRELLQ 1161
Cdd:TIGR02169 715 SRKIGEIEKEIEQLE---QEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEDlhkleealndleARLSHS 791
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1162 EVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELE 1241
Cdd:TIGR02169 792 RIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELE 871
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1242 -------TEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNsEKIHLLQEALFASEQRL-----LAEREELVNENK 1309
Cdd:TIGR02169 872 eleaalrDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKR-KRLSELKAKLEALEEELseiedPKGEDEEIPEEE 950
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359640 1310 AVTEKLtKATADAVLAETAFTEKINELNLEK-ESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKS 1377
Cdd:TIGR02169 951 LSLEDV-QAELQRVEEEIRALEPVNMLAIQEyEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKRE 1018
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1116-1944 |
2.77e-10 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 65.86 E-value: 2.77e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1116 KEREELEHYQKLLEENDRVIKDKDDVIQRLQSsyddlarnqrellqevsiltaERDSAqEKDLDLKSTHIalKNEIDCLL 1195
Cdd:TIGR02169 174 KALEELEEVEENIERLDLIIDEKRQQLERLRR---------------------EREKA-ERYQALLKEKR--EYEGYELL 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1196 QTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNM-DLKASLSSLSNFLEEMKSS 1274
Cdd:TIGR02169 230 KEKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQlRVKEKIGELEAEIASLERS 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1275 REASNSEKIHLLQEA--LFASEQRLLAEREEL---VNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQ 1349
Cdd:TIGR02169 310 IAEKERELEDAEERLakLEAEIDKLLAEIEELereIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKD 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1350 FEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELK----KKNLENQ 1425
Cdd:TIGR02169 390 YREKLEKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEqlaaDLSKYEQ 469
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1426 ELIACRSDLSDLLKEAQDARRtlenELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLtGEVE---------- 1495
Cdd:TIGR02169 470 ELYDLKEEYDRVEKELSKLQR----ELAEAEAQARASEERVRGGRAVEEVLKASIQGVHGTVAQL-GSVGeryataieva 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1496 --NMKENLTVEK-----------KARILDKESFL-----------LERMELQNNIGFLEKEVEEMREKNKEFL------- 1544
Cdd:TIGR02169 545 agNRLNNVVVEDdavakeaiellKRRKAGRATFLplnkmrderrdLSILSEDGVIGFAVDLVEFDPKYEPAFKyvfgdtl 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1545 ------TEKELLVQ-----------EKEKSET----KLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDvh 1603
Cdd:TIGR02169 625 vvedieAARRLMGKyrmvtlegelfEKSGAMTggsrAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIEN-- 702
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1604 scvsvMLDELQHKYEVTEKEKMELVQENESLHAEwkslviinEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSCRLlv 1683
Cdd:TIGR02169 703 -----RLDELSQELSDASRKIGEIEKEIEQLEQE--------EEKLKERLEELEEDLSSLEQEIENVKSELKELEARI-- 767
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1684 segkhELLLEEMSNLALKLREIERLQAQTFMQKFEADKRA-EEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQ 1762
Cdd:TIGR02169 768 -----EELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKlEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQR 842
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1763 NELDMLKQNNLKNEEELtkskellnleNKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVtshQKLE 1842
Cdd:TIGR02169 843 IDLKEQIKSIEKEIENL----------NGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERKI---EELE 909
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1843 EERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEEraslqKSISDTSALITQKDEELEKLRNEITVLRGENASA------- 1915
Cdd:TIGR02169 910 AQIEKKRKRLSELKAKLEALEEELSEIEDPKGED-----EEIPEEELSLEDVQAELQRVEEEIRALEPVNMLAiqeyeev 984
|
890 900 910
....*....|....*....|....*....|...
gi 2024359640 1916 ----KTLQSVVKTLESDKLKLEEKVKNLEQKLK 1944
Cdd:TIGR02169 985 lkrlDELKEKRAKLEEERKAILERIEEYEKKKR 1017
|
|
| NIP100 |
COG5244 |
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle ... |
61-122 |
3.36e-10 |
|
Dynactin complex subunit involved in mitotic spindle partitioning in anaphase B [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 227569 [Multi-domain] Cd Length: 669 Bit Score: 65.48 E-value: 3.36e-10
10 20 30 40 50 60
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024359640 61 VGERVWVNGNKpGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEPLRGIFTRP 122
Cdd:COG5244 6 VNDRVLLGDKF-GTVRFIGKTKFKDGIWIGLELDDPVGKNDGSVNGVRYFHCKKRHGIFIRP 66
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
1693-1947 |
3.73e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.46 E-value: 3.73e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1693 EEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNN 1772
Cdd:TIGR02168 253 EELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKL 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1773 LKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQK-----------L 1841
Cdd:TIGR02168 333 DELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNeierlearlerL 412
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1842 EEERSVLNNQLLEMKKSLPSNTLRE-STLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQS 1920
Cdd:TIGR02168 413 EDRRERLQQEIEELLKKLEEAELKElQAELEELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLD 492
|
250 260
....*....|....*....|....*..
gi 2024359640 1921 VVKTLESDKLKLEEKVKNLEQKLKAKS 1947
Cdd:TIGR02168 493 SLERLQENLEGFSEGVKALLKNQSGLS 519
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1530-1944 |
3.81e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 65.47 E-value: 3.81e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1530 EKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVM 1609
Cdd:PRK03918 188 TENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEER 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1610 LDELQHKYEVTEkEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQtdadfscrllvsegkhe 1689
Cdd:PRK03918 268 IEELKKEIEELE-EKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEER----------------- 329
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1690 llLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLaslensrqtnEKLQNELDMLK 1769
Cdd:PRK03918 330 --IKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTGLTP----------EKLEKELEELE 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1770 QNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEEN-----VKLAEELGRSRDEVtshQKLEEE 1844
Cdd:PRK03918 398 KAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHrkellEEYTAELKRIEKEL---KEIEEK 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1845 RSVLNNQLLEMKKSLpSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKT 1924
Cdd:PRK03918 475 ERKLRKELRELEKVL-KKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEE 553
|
410 420
....*....|....*....|
gi 2024359640 1925 LESDKLKLEEKVKNLEQKLK 1944
Cdd:PRK03918 554 LKKKLAELEKKLDELEEELA 573
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
887-1718 |
5.40e-10 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 64.99 E-value: 5.40e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 887 KKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLAS 966
Cdd:pfam02463 176 KKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIES 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 967 ARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEA 1046
Cdd:pfam02463 256 SKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKE 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1047 KSRQESTEKVAL----------ISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIK 1116
Cdd:pfam02463 336 EIEELEKELKELeikreaeeeeEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELAR 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1117 EREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQ 1196
Cdd:pfam02463 416 QLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLLSRQKL 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1197 TNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSRE 1276
Cdd:pfam02463 496 EERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATADEVEERQKLVRALTELPL 575
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1277 ASNSeKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEA 1356
Cdd:pfam02463 576 GARK-LRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSL 654
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1357 LLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELK-KKNLENQELIACRSDLS 1435
Cdd:pfam02463 655 EEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKlEAEELLADRVQEAQDKI 734
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1436 DLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTVEKKARILDKESF 1515
Cdd:pfam02463 735 NEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEA 814
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1516 LLERmELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVS 1595
Cdd:pfam02463 815 ELLE-EEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEE 893
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1596 KAELE----DVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLE 1671
Cdd:pfam02463 894 KEKEEkkelEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELG 973
|
810 820 830 840
....*....|....*....|....*....|....*....|....*..
gi 2024359640 1672 QTDADFSCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFE 1718
Cdd:pfam02463 974 KVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQRLK 1020
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
336-1317 |
6.41e-10 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 64.81 E-value: 6.41e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 336 LLTETSSRYARKISGTTALQEALKEKQQHIEQLlaERDLERAEVAKATSHVGEIEQELALVRdgHDRHVLEMEAKMDQLR 415
Cdd:pfam01576 76 ILHELESRLEEEEERSQQLQNEKKKMQQHIQDL--EEQLDEEEAARQKLQLEKVTTEAKIKK--LEEDILLLEDQNSKLS 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 416 AMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSllfektkADKLQRELEDTRVAT 495
Cdd:pfam01576 152 KERKLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKA-------KRKLEGESTDLQEQI 224
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 496 VSEKSRIMELERDLALRVKEVAELRGRLEsskhiddvdtslsllqEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALR 575
Cdd:pfam01576 225 AELQAQIAELRAQLAKKEEELQAALARLE----------------EETAQKNNALKKIRELEAQISELQEDLESERAARN 288
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 576 KEIKTlsasNERMGKENESLKTKLDHANKENSDVIELwKSKLESAIASHQQAMEELKVSFNKGVG----AQTAEFAELKT 651
Cdd:pfam01576 289 KAEKQ----RRDLGEELEALKTELEDTLDTTAAQQEL-RSKREQEVTELKKALEEETRSHEAQLQemrqKHTQALEELTE 363
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 652 QMEKVKldyENEMSNLKLKQ--ENEKSQHLKEIEALKAKLLEVTEEK---EQTLENLKAKLESVEDQHlVEMEDTLNKLQ 726
Cdd:pfam01576 364 QLEQAK---RNKANLEKAKQalESENAELQAELRTLQQAKQDSEHKRkklEGQLQELQARLSESERQR-AELAEKLSKLQ 439
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 727 -----------EAEIKKEKFTSAVDGAENaqrAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLT 795
Cdd:pfam01576 440 selesvssllnEAEGKNIKLSKDVSSLES---QLQDTQELLQEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVE 516
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 796 EAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQS--QQETLKTHQ 873
Cdd:pfam01576 517 RQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLlvDLDHQRQLV 596
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 874 EELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDAdikgFKQNLLDAEEALKAAQKKNDELETQAEELKKQ 953
Cdd:pfam01576 597 SNLEKKQKKFDQMLAEEKAISARYAEERDRAEAEAREKETRALS----LARALEEALEAKEELERTNKQLRAEMEDLVSS 672
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 954 AEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEkesllsqhLEMESKILLVQQDReELWTKNEELNSE 1033
Cdd:pfam01576 673 KDDVGKNVHELERSKRALEQQVEEMKTQLEELEDELQATEDAKLR--------LEVNMQALKAQFER-DLQARDEQGEEK 743
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1034 NKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLlkitqenDALRSSESTLLQQLKELQANKDAVDVACQK 1113
Cdd:pfam01576 744 RRQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQI-------DAANKGREEAVKQLKKLQAQMKDLQRELEE 816
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1114 HIKEREELEHYQKlleENDRVIKDKDDVIQRLQssyDDLARNQRELLQevsiLTAERDSAQEKDLDLKSTHIALKNEidc 1193
Cdd:pfam01576 817 ARASRDEILAQSK---ESEKKLKNLEAELLQLQ---EDLAASERARRQ----AQQERDELADEIASGASGKSALQDE--- 883
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1194 llqtNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKS 1273
Cdd:pfam01576 884 ----KRRLEARIAQLEEELEEEQSNTELLNDRLRKSTLQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKLQEMEG 959
|
970 980 990 1000
....*....|....*....|....*....|....*....|....
gi 2024359640 1274 SREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTK 1317
Cdd:pfam01576 960 TVKSKFKSSIAALEAKIAQLEEQLEQESRERQAANKLVRRTEKK 1003
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1199-1785 |
9.77e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 63.93 E-value: 9.77e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1199 RSLQSEKEMLLKSREELCVSLANTANenqaLKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREAS 1278
Cdd:PRK03918 165 KNLGEVIKEIKRRIERLEKFIKRTEN----IEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEI 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1279 NSEKIHLLQ-EALFASEQRLLAEREELVNENKAVTEKLT---------KATADAVLAETAFTEKINELNLEKESVFSKSL 1348
Cdd:PRK03918 241 EELEKELESlEGSKRKLEEKIRELEERIEELKKEIEELEekvkelkelKEKAEEYIKLSEFYEEYLDELREIEKRLSRLE 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1349 QFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENttlKYSIEALEEELKKKNLENQELI 1428
Cdd:PRK03918 321 EEINGIEERIKELEEKEERLEELKKKLKELEKRLEELEERHELYEEAKAKKEELE---RLKKRLTGLTPEKLEKELEELE 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1429 ACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSsdieILNRERTELQDK--CQKLTGEVENMKENL-TVEK 1505
Cdd:PRK03918 398 KAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCP----VCGRELTEEHRKelLEEYTAELKRIEKELkEIEE 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1506 KARILDKESFLLER-MELQNNIGFLEKEVEEMREKNKEFlteKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQ 1584
Cdd:PRK03918 474 KERKLRKELRELEKvLKKESELIKLKELAEQLKELEEKL---KKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEK 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1585 LKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLhE 1664
Cdd:PRK03918 551 LEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEEL-D 629
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1665 KVVALLEQTDADF-SCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIhQE 1743
Cdd:PRK03918 630 KAFEELAETEKRLeELRKELEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEER-EK 708
|
570 580 590 600
....*....|....*....|....*....|....*....|..
gi 2024359640 1744 KIETLASLENSRQTNEKLQNELDMLKqnNLKNEEELTKSKEL 1785
Cdd:PRK03918 709 AKKELEKLEKALERVEELREKVKKYK--ALLKERALSKVGEI 748
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
461-1257 |
1.14e-09 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 63.84 E-value: 1.14e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 461 KLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLES--SKHIDDVDTSLSL 538
Cdd:pfam02463 169 RKKKEALKKLIEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKlnEERIDLLQELLRD 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 539 LQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSdVIELWKSKLE 618
Cdd:pfam02463 249 EQEEIESSKQEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEKLK-ESEKEKKKAE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 619 SAIASHQQAMEELKVSfNKGVGAQTAEFAELKTQMEKVKLDYENEMSNLKLKQEnEKSQHLKEIEALKAKLLEVTEEKEQ 698
Cdd:pfam02463 328 KELKKEKEEIEELEKE-LKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKK-LESERLSSAAKLKEEELELKSEEEK 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 699 TLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLT 778
Cdd:pfam02463 406 EAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQ 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 779 VMETKLKEREEREQQLTEAKVKLENDIAEIMKS--------------------SGDSSAQLMKMNDELRLKERQLEQIQL 838
Cdd:pfam02463 486 LELLLSRQKLEERSQKESKARSGLKVLLALIKDgvggriisahgrlgdlgvavENYKVAISTAVIVEVSATADEVEERQK 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 839 ELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDAD 918
Cdd:pfam02463 566 LVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKE 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 919 IKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLE 998
Cdd:pfam02463 646 SGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLAD 725
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 999 KESLLSQHLEMESKILLVQQDREELwtknEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETA-QADLL 1077
Cdd:pfam02463 726 RVQEAQDKINEELKLLKQKIDEEEE----EEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKlKAQEE 801
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1078 KITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQR 1157
Cdd:pfam02463 802 ELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEE 881
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1158 ELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQtNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQ 1237
Cdd:pfam02463 882 QKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIE-ERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEE 960
|
810 820
....*....|....*....|
gi 2024359640 1238 TELETEREKLEKMTKDNMDL 1257
Cdd:pfam02463 961 RNKRLLLAKEELGKVNLMAI 980
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
465-1069 |
1.28e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 63.54 E-value: 1.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 465 ARIKELEqSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLESSKHIddvdtsLSLLQEISS 544
Cdd:PRK03918 176 RRIERLE-KFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEE------IEELEKELE 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 545 LQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSaSNERMGKENESLKTKLDHANKENSDvIELWKSKLESAIASH 624
Cdd:PRK03918 249 SLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELK-ELKEKAEEYIKLSEFYEEYLDELRE-IEKRLSRLEEEINGI 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 625 QQAMEELKvSFNKGVGAQTAEFAELKTQMEKVKLD---YENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLE 701
Cdd:PRK03918 327 EERIKELE-EKEERLEELKKKLKELEKRLEELEERhelYEEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEE 405
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 702 NLKAKLEsvedqHLVEMEDTLNKLQEA--EIKKEKFTSAVDGAENAQramqetinklnqkEEQFALMSSELEQLKSnltv 779
Cdd:PRK03918 406 EISKITA-----RIGELKKEIKELKKAieELKKAKGKCPVCGRELTE-------------EHRKELLEEYTAELKR---- 463
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 780 METKLKEREEREQQLTEAKVKLENDIAEIMKSSgdssaQLMKMNDELRLKERQLEQIQLELTKANEKavqLQKNVEQTAQ 859
Cdd:PRK03918 464 IEKELKEIEEKERKLRKELRELEKVLKKESELI-----KLKELAEQLKELEEKLKKYNLEELEKKAE---EYEKLKEKLI 535
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 860 KAEqSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIK---GFKQNLLDAEEALKAA 936
Cdd:PRK03918 536 KLK-GEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKelePFYNEYLELKDAEKEL 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 937 QKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMS-----DKMRDLISEKETLAQERNTLKLEKESLLSQHLEMES 1011
Cdd:PRK03918 615 EREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEkkyseEEYEELREEYLELSRELAGLRAELEELEKRREEIKK 694
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359640 1012 KILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEI 1069
Cdd:PRK03918 695 TLEKLKEELEEREKAKKELEKLEKALERVEELREKVKKYKALLKERALSKVGEIASEI 752
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
531-1262 |
1.32e-09 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 63.59 E-value: 1.32e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 531 DVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKfESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVI 610
Cdd:pfam05483 69 DFENSEGLSRLYSKLYKEAEKIKKWKVSIEAELKQK-ENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLI 147
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 611 E------LWKSKLESAIAS----------HQQAMEELKVSFNKGVGAQTAEFAELKTQMEKVKLDYenemsNLKLKQENE 674
Cdd:pfam05483 148 KennatrHLCNLLKETCARsaektkkyeyEREETRQVYMDLNNNIEKMILAFEELRVQAENARLEM-----HFKLKEDHE 222
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 675 KSQHLKE--------IEALKAKLLEVTEEKEQTLENLKAKLESVEDQhlVEMEDTLNKLQEAEIKK--EKFTSAVDGAEN 744
Cdd:pfam05483 223 KIQHLEEeykkeindKEKQVSLLLIQITEKENKMKDLTFLLEESRDK--ANQLEEKTKLQDENLKEliEKKDHLTKELED 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 745 AQRAMQETINKLNQKEEQFALMSSELEQLKsnltvmetklKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMND 824
Cdd:pfam05483 301 IKMSLQRSMSTQKALEEDLQIATKTICQLT----------EEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQ 370
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 825 ELRLKERQLEQIQLELTKANEKAVQLQKnveqtAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQykdlqaky 904
Cdd:pfam05483 371 RLEKNEDQLKIITMELQKKSSELEEMTK-----FKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGK-------- 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 905 EKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEielMSDKMRDLISE 984
Cdd:pfam05483 438 EQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKE---LTQEASDMTLE 514
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 985 KETLAQERNTLKLEKESLLSQHLEMESKILLVQQD----REELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALIS 1060
Cdd:pfam05483 515 LKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDElesvREEFIQKGDEVKCKLDKSEENARSIEYEVLKKEKQMKILEN 594
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1061 EKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLK--ELQANKDAVDVACQKHiKEREELEHYQKLLEENDRVIKDK 1138
Cdd:pfam05483 595 KCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQLNayEIKVNKLELELASAKQ-KFEEIIDNYQKEIEDKKISEEKL 673
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1139 DDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDldlKSTHIALKNEIDCLLQTNRSLQSEKEMLlksREELCVS 1218
Cdd:pfam05483 674 LEEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVALMEKH---KHQYDKIIEERDSELGLYKNKEQEQSSA---KAALEIE 747
|
730 740 750 760
....*....|....*....|....*....|....*....|....
gi 2024359640 1219 LANTANENQALKlrkdemqTELETEREKLEKMTKDNMDLKASLS 1262
Cdd:pfam05483 748 LSNIKAELLSLK-------KQLEIEKEEKEKLKMEAKENTAILK 784
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
346-1002 |
1.39e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 63.55 E-value: 1.39e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 346 RKISGTTALQEALKEKQQHIEQLLAE-----RDLERAEVAKATSHVGEIEQELALVRDGHD---RHVLEMEAKMDQLRAM 417
Cdd:TIGR02169 251 EELEKLTEEISELEKRLEEIEQLLEElnkkiKDLGEEEQLRVKEKIGELEAEIASLERSIAekeRELEDAEERLAKLEAE 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 418 VEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVS 497
Cdd:TIGR02169 331 IDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDR 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 498 EKSRIMELERDLALRVKEVAELRGRL-ESSKHIDDVDTSLSLL-QEISSLQEKMAAAGKEHQREMSSLkEKFESSEEALR 575
Cdd:TIGR02169 411 LQEELQRLSEELADLNAAIAGIEAKInELEEEKEDKALEIKKQeWKLEQLAADLSKYEQELYDLKEEY-DRVEKELSKLQ 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 576 KEIKTLSASNERMGKENESLKTKLDHANKENSDVI----ELWKSKLESAIASHQQAMEELK--VSFNKGVGAQTAEFA-- 647
Cdd:TIGR02169 490 RELAEAEAQARASEERVRGGRAVEEVLKASIQGVHgtvaQLGSVGERYATAIEVAAGNRLNnvVVEDDAVAKEAIELLkr 569
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 648 -------------------ELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKE------IEALKAKLLE---VTEEKE-- 697
Cdd:TIGR02169 570 rkagratflplnkmrderrDLSILSEDGVIGFAVDLVEFDPKYEPAFKYVFGDtlvvedIEAARRLMGKyrmVTLEGElf 649
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 698 -----------------QTLENLKAKLESVEDQhLVEMEDTLNKLQE--AEIKKEKF--TSAVDGAENAQRAMQETINKL 756
Cdd:TIGR02169 650 eksgamtggsraprggiLFSRSEPAELQRLRER-LEGLKRELSSLQSelRRIENRLDelSQELSDASRKIGEIEKEIEQL 728
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 757 NQKEEQF----ALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDS-----SAQLMKMNDELR 827
Cdd:TIGR02169 729 EQEEEKLkerlEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSripeiQAELSKLEEEVS 808
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 828 LKERQLEQIQLELTKANEKAVQLQKNVEQ--------TAQKAEQSQQ------------ETLKTHQEELKKMQDQLTDMK 887
Cdd:TIGR02169 809 RIEARLREIEQKLNRLTLEKEYLEKEIQElqeqridlKEQIKSIEKEienlngkkeeleEELEELEAALRDLESRLGDLK 888
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 888 KQMETSQNQYKDLQAKYE--KETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDE-------LETQAEELKKQAEQAK 958
Cdd:TIGR02169 889 KERDELEAQLRELERKIEelEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEipeeelsLEDVQAELQRVEEEIR 968
|
730 740 750 760
....*....|....*....|....*....|....*....|....
gi 2024359640 959 SLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESL 1002
Cdd:TIGR02169 969 ALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEY 1012
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
659-1270 |
1.42e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 63.54 E-value: 1.42e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 659 DYENEMSNLKlkqenEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVedqhlvemedtLNKLQEAEIKKEKFTSA 738
Cdd:PRK03918 159 DYENAYKNLG-----EVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEV-----------LREINEISSELPELREE 222
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 739 VDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLtEAKVKLENDIAEIMKSSGDSSAQ 818
Cdd:PRK03918 223 LEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELKKEIEEL-EEKVKELKELKEKAEEYIKLSEF 301
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 819 LMKMNDELRlkerqleQIQLELTKANEKAVQLQKNVEQTAQKaeQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYK 898
Cdd:PRK03918 302 YEEYLDELR-------EIEKRLSRLEEEINGIEERIKELEEK--EERLEELKKKLKELEKRLEELEERHELYEEAKAKKE 372
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 899 DLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEI------E 972
Cdd:PRK03918 373 ELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELteehrkE 452
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 973 LMSD---KMRDLISEKETLAQERNTLKLEKESLLSQhLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSR 1049
Cdd:PRK03918 453 LLEEytaELKRIEKELKEIEEKERKLRKELRELEKV-LKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLK 531
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1050 QESTEkvaLISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELehYQKLLE 1129
Cdd:PRK03918 532 EKLIK---LKGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEERLKELEPF--YNEYLE 606
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1130 endrvIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKS-----THIALKNEIDCLLQTNRSLQSE 1204
Cdd:PRK03918 607 -----LKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKkyseeEYEELREEYLELSRELAGLRAE 681
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359640 1205 KEMLLKSREELCVSLANtanenqaLKLRKDEMQtELETEREKLEKMTKDNMDLKASLSSLSNFLEE 1270
Cdd:PRK03918 682 LEELEKRREEIKKTLEK-------LKEELEERE-KAKKELEKLEKALERVEELREKVKKYKALLKE 739
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
852-1589 |
1.43e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 63.50 E-value: 1.43e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 852 KNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAK------YEKETSEMITKHDADIKGFKQN 925
Cdd:TIGR04523 25 KNIANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNSNNKikileqQIKDLNDKLKKNKDKINKLNSD 104
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 926 LLDAEEALKAAQKKNDELETQAEELKKQAEQAKSL----SSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKES 1001
Cdd:TIGR04523 105 LSKINSEIKNDKEQKNKLEVELNKLEKQKKENKKNidkfLTEIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLN 184
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1002 LLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEaaeaKSRQESTEKVALISEKSKLLSEIETAQADLLKITQ 1081
Cdd:TIGR04523 185 IQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKK----QNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKD 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1082 ENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREEL--EHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQREL 1159
Cdd:TIGR04523 261 EQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLnnQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKIISQL 340
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1160 LQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTE 1239
Cdd:TIGR04523 341 NEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQE 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1240 LETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEalfaseqrlLAEREELVNENKAVTEKLTKAT 1319
Cdd:TIGR04523 421 KELLEKEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQ---------LKVLSRSINKIKQNLEQKQKEL 491
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1320 ADAvlaetafTEKINELNLEKEsvfskslQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKRE-QELDFSAKRL 1398
Cdd:TIGR04523 492 KSK-------EKELKKLNEEKK-------ELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDElNKDDFELKKE 557
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1399 LvqenttLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNR 1478
Cdd:TIGR04523 558 N------LEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSS 631
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1479 ERTELQDKCQKLTGEVENMKENL--TVEKKARILDKESFLLERmeLQNNIGFLEKEVEEMREKNKEFLTEKellvqEKEK 1556
Cdd:TIGR04523 632 IIKNIKSKKNKLKQEVKQIKETIkeIRNKWPEIIKKIKESKTK--IDDIIELMKDWLKELSLHYKKYITRM-----IRIK 704
|
730 740 750
....*....|....*....|....*....|...
gi 2024359640 1557 SETKLEEVIKEKMILYKETEQLASKIEQLKSDF 1589
Cdd:TIGR04523 705 DLPKLEEKYKEIEKELKKLDEFSKELENIIKNF 737
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
625-1500 |
1.83e-09 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 63.14 E-value: 1.83e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 625 QQAMEELKVSFNKGVGAQTAEFAELKTQMEKV------------KLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEV 692
Cdd:TIGR00606 188 LETLRQVRQTQGQKVQEHQMELKYLKQYKEKAceirdqitskeaQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKL 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 693 TEE------KEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEikkekfTSAVDGAENAQRAMQETINKLNQKEEQFALM 766
Cdd:TIGR00606 268 DNEikalksRKKQMEKDNSELELKMEKVFQGTDEQLNDLYHNH------QRTVREKERELVDCQRELEKLNKERRLLNQE 341
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 767 SSELEQLKSNLTVMETKLKER-EEREQQLTEAKVKLEND------------------IAEIMKSSGDSSAQLM-KMNDEL 826
Cdd:TIGR00606 342 KTELLVEQGRLQLQADRHQEHiRARDSLIQSLATRLELDgfergpfserqiknfhtlVIERQEDEAKTAAQLCaDLQSKE 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 827 RLKERQLEQIQLELTKAN----------EKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQD-------QLTDMKKQ 889
Cdd:TIGR00606 422 RLKQEQADEIRDEKKGLGrtielkkeilEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERElskaeknSLTETLKK 501
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 890 METS-QNQYKDLQAKYEKETSEMITKhDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQA---EQAKSLSSVLA 965
Cdd:TIGR00606 502 EVKSlQNEKADLDRKLRKLDQEMEQL-NHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELTSLLgyfPNKKQLEDWLH 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 966 SARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILlvqqdrEELWTKNEELNSENKKilkqkeaae 1045
Cdd:TIGR00606 581 SKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLF------DVCGSQDEESDLERLK--------- 645
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1046 aKSRQESTEKVALISEKSKLLSEIETaqadllKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELEHYQ 1125
Cdd:TIGR00606 646 -EEIEKSSKQRAMLAGATAVYSQFIT------QLTDENQSCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESEL 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1126 KLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKSThIALKNEIDCLLQTNRSLQSEK 1205
Cdd:TIGR00606 719 KKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGT-IMPEEESAKVCLTDVTIMERF 797
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1206 EMLLKSREELCVSLAnTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHL 1285
Cdd:TIGR00606 798 QMELKDVERKIAQQA-AKLQGSDLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQI 876
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1286 LQEAlfaseQRLLAEREELVNENKAVTEkLTKATADAVLAETAFTEKINELNLEKESVFSKSlqfEKHNEALLREKDELE 1365
Cdd:TIGR00606 877 GTNL-----QRRQQFEEQLVELSTEVQS-LIREIKDAKEQDSPLETFLEKDQQEKEELISSK---ETSNKKAQDKVNDIK 947
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1366 RKYSELLDEKKSLENAFSDMKREQeldfsakrlLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSdllkEAQDAR 1445
Cdd:TIGR00606 948 EKVKNIHGYMKDIENKIQDGKDDY---------LKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDID----TQKIQE 1014
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|....*
gi 2024359640 1446 RTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKEN 1500
Cdd:TIGR00606 1015 RWLQDNLTLRKRENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEENIDLIKRN 1069
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
737-968 |
2.66e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 61.32 E-value: 2.66e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 737 SAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSS 816
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 817 AQLMKMNDE----LRLKERQLEQIQLELTKANEKAVQLQKNVE--QTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQM 890
Cdd:COG4942 97 AELEAQKEElaelLRALYRLGRQPPLALLLSPEDFLDAVRRLQylKYLAPARREQAEELRADLAELAALRAELEAERAEL 176
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359640 891 ETSQNQYKDLQAKYEKETSEmitkHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASAR 968
Cdd:COG4942 177 EALLAELEEERAALEALKAE----RQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAA 250
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
346-622 |
2.85e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.77 E-value: 2.85e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 346 RKISGTTALQEALKEKQQHIEQLLAERDLERAEVAkatshvgEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEAA---- 421
Cdd:TIGR02168 726 RQISALRKDLARLEAEVEQLEERIAQLSKELTELE-------AEIEELEERLEEAEEELAEAEAEIEELEAQIEQLkeel 798
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 422 ---DREKVELLNQLEEEKR-------KVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDT 491
Cdd:TIGR02168 799 kalREALDELRAELTLLNEeaanlreRLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAL 878
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 492 RVATVSEKSRIMELERDLALRVKEVAELRGRL--------ESSKHIDDVDTSLS-LLQEISSLQEKMAAAGKEHQREMSS 562
Cdd:TIGR02168 879 LNERASLEEALALLRSELEELSEELRELESKRselrreleELREKLAQLELRLEgLEVRIDNLQERLSEEYSLTLEEAEA 958
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024359640 563 LKEKFESSEEALRKEIKTLSASNERMGKEN-------ESLKTKLDHANKENSDVIELwKSKLESAIA 622
Cdd:TIGR02168 959 LENKIEDDEEEARRRLKRLENKIKELGPVNlaaieeyEELKERYDFLTAQKEDLTEA-KETLEEAIE 1024
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
430-1101 |
3.64e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 61.96 E-value: 3.64e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 430 NQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELErdl 509
Cdd:TIGR04523 47 NELKNKEKELKNLDKNLNKDEEKINNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLE--- 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 510 alrvkevaelrgrlesskhiddvdtslsllQEISSLqekmaaagKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMG 589
Cdd:TIGR04523 124 ------------------------------VELNKL--------EKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLK 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 590 KENESLKTKLDHANKENSDVI-ELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFAELKTQMEKVKLDYENEMSNLK 668
Cdd:TIGR04523 166 KQKEELENELNLLEKEKLNIQkNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKT 245
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 669 LKQENEKSQhLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQ-HLVEME-DTLNKLQEAEIKKEkftsAVDGAENAQ 746
Cdd:TIGR04523 246 TEISNTQTQ-LNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQlNQLKSEiSDLNNQKEQDWNKE----LKSELKNQE 320
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 747 RAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETklkEREEREQQLTEAKVKLENDIAEImKSSGDSSAQLMKMNDEL 826
Cdd:TIGR04523 321 KKLEEIQNQISQNNKIISQLNEQISQLKKELTNSES---ENSEKQRELEEKQNEIEKLKKEN-QSYKQEIKNLESQINDL 396
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 827 RLKERQLEQIQLELtkaNEKAVQLQKNVEQTAQKAEQSQQETLKtHQEELKKMQDQLTDMKKQMEtSQNQYKDLQAKYEK 906
Cdd:TIGR04523 397 ESKIQNQEKLNQQK---DEQIKKLQQEKELLEKEIERLKETIIK-NNSEIKDLTNQDSVKELIIK-NLDNTRESLETQLK 471
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 907 ETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIElmsDKMRDLISEKE 986
Cdd:TIGR04523 472 VLSRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKE---SKISDLEDELN 548
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 987 TLAQERNTLKLEKESllsqhLEMESKILLVQQDREELWTKNEELnsenKKILKQKEAAEAKSRQESTEKVALISEKSKll 1066
Cdd:TIGR04523 549 KDDFELKKENLEKEI-----DEKNKEIEELKQTQKSLKKKQEEK----QELIDQKEKEKKDLIKEIEEKEKKISSLEK-- 617
|
650 660 670
....*....|....*....|....*....|....*
gi 2024359640 1067 sEIETAQADLLKITQENDALRSSESTLLQQLKELQ 1101
Cdd:TIGR04523 618 -ELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIK 651
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
336-1029 |
3.96e-09 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 62.05 E-value: 3.96e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 336 LLTETSSRYARKISGTTALQEALKEKQQHIEQLLaERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDqlr 415
Cdd:pfam05483 159 LLKETCARSAEKTKKYEYEREETRQVYMDLNNNI-EKMILAFEELRVQAENARLEMHFKLKEDHEKIQHLEEEYKKE--- 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 416 amVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQsllfektKADKLQRELEDTRVAT 495
Cdd:pfam05483 235 --INDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKANQLEEKTKLQDENLKELIE-------KKDHLTKELEDIKMSL 305
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 496 VSEKSRIMELERDLALRVKEVAELRgrlesskhiddvdtslsllQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALR 575
Cdd:pfam05483 306 QRSMSTQKALEEDLQIATKTICQLT-------------------EEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLR 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 576 KEiktlsasNERMGKENESLKTKLDHANKENSDVIELWKSKlesaiashqqameelkvsfnkgvGAQTAEFAELKTQM-E 654
Cdd:pfam05483 367 TE-------QQRLEKNEDQLKIITMELQKKSSELEEMTKFK-----------------------NNKEVELEELKKILaE 416
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 655 KVKLDYENemsnlklKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKKEK 734
Cdd:pfam05483 417 DEKLLDEK-------KQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIE 489
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 735 FTSavdgaeNAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGD 814
Cdd:pfam05483 490 LTA------HCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDE 563
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 815 SSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETL------KTHQEELKKMQDQLTDMKK 888
Cdd:pfam05483 564 VKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKalkkkgSAENKQLNAYEIKVNKLEL 643
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 889 QMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASAR 968
Cdd:pfam05483 644 ELASAKQKFEEIIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEER 723
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024359640 969 -KEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQ-HLEMESKILLVQQDREELWTKNEE 1029
Cdd:pfam05483 724 dSELGLYKNKEQEQSSAKAALEIELSNIKAELLSLKKQlEIEKEEKEKLKMEAKENTAILKDK 786
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
1473-1994 |
5.36e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 61.62 E-value: 5.36e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1473 IEILNRERTELQDKCQKlTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMrEKNKEFLTEKELLVQ 1552
Cdd:PRK03918 171 IKEIKRRIERLEKFIKR-TENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKEL-EELKEEIEELEKELE 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1553 EKEKSETKLEEVIK--EKMI--LYKETEQLASKIEQLKS------DFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEK 1622
Cdd:PRK03918 249 SLEGSKRKLEEKIRelEERIeeLKKEIEELEEKVKELKElkekaeEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEE 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1623 EkmelVQENESLHAEWKSLVIINEEILKEKEKLsKEYYKLHEKVVALLEQTD---ADFSCR--------LLVSEGKHELL 1691
Cdd:PRK03918 329 R----IKELEEKEERLEELKKKLKELEKRLEEL-EERHELYEEAKAKKEELErlkKRLTGLtpeklekeLEELEKAKEEI 403
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1692 LEEMSNLALKLREIERLQAQ--TFMQKFEADKRA----------EEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNE 1759
Cdd:PRK03918 404 EEEISKITARIGELKKEIKElkKAIEELKKAKGKcpvcgrelteEHRKELLEEYTAELKRIEKELKEIEEKERKLRKELR 483
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1760 KLQNELdmlkqnnlKNEEELTKSKELL----NLENK-------KVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEEL 1828
Cdd:PRK03918 484 ELEKVL--------KKESELIKLKELAeqlkELEEKlkkynleELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELK 555
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1829 GRSRDEVTSHQKLEEERSVLNNQLLEMK-KSLPSNTLRESTLK---------KEIDEERASLQKSISDTSALITQKDEEL 1898
Cdd:PRK03918 556 KKLAELEKKLDELEEELAELLKELEELGfESVEELEERLKELEpfyneylelKDAEKELEREEKELKKLEEELDKAFEEL 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1899 EKLRNEITVLRGENASAKTLQSV--VKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSGDIAANLlqdESAEDKQQE 1976
Cdd:PRK03918 636 AETEKRLEELRKELEELEKKYSEeeYEELREEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEEL---EEREKAKKE 712
|
570
....*....|....*...
gi 2024359640 1977 IDFLNSVIVDLQRRNEEL 1994
Cdd:PRK03918 713 LEKLEKALERVEELREKV 730
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
823-1055 |
5.62e-09 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 60.55 E-value: 5.62e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 823 NDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQE------TLKTHQEELKKMQDQLTDMKKQMETSQNQ 896
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRiaalarRIRALEQELAALEAELAELEKEIAELRAE 98
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 897 YKDLQAKYEKETSEMITKHDADIKGF---KQNLLDAEEALKAAQKKNDELETQAEELKKQAEQakslssvLASARKEIEL 973
Cdd:COG4942 99 LEAQKEELAELLRALYRLGRQPPLALllsPEDFLDAVRRLQYLKYLAPARREQAEELRADLAE-------LAALRAELEA 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 974 MSDKMRDLISEKETLAQERNTLKLEKESLLSQhleMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQEST 1053
Cdd:COG4942 172 ERAELEALLAELEEERAALEALKAERQKLLAR---LEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGF 248
|
..
gi 2024359640 1054 EK 1055
Cdd:COG4942 249 AA 250
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1046-1843 |
5.73e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 61.62 E-value: 5.73e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1046 AKSRQESTEKVALISEKSkllSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDvACQKHIKEREELEHYQ 1125
Cdd:TIGR02169 152 PVERRKIIDEIAGVAEFD---RKKEKALEELEEVEENIERLDLIIDEKRQQLERLRREREKAE-RYQALLKEKREYEGYE 227
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1126 KL--LEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDLKS-THIALKNEIDCLLQTNRSLQ 1202
Cdd:TIGR02169 228 LLkeKEALERQKEAIERQLASLEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEeEQLRVKEKIGELEAEIASLE 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1203 SEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEM----KSSREAS 1278
Cdd:TIGR02169 308 RSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAELKEELEDLRAELEEVdkefAETRDEL 387
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1279 NSEKIHLlqEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAEtaftEKINELNLEKESVFSKSLQFEKHNEALL 1358
Cdd:TIGR02169 388 KDYREKL--EKLKREINELKRELDRLQEELQRLSEELADLNAAIAGIE----AKINELEEEKEDKALEIKKQEWKLEQLA 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1359 REKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELKK--------KNLENQELIAC 1430
Cdd:TIGR02169 462 ADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASIQGvhgtvaqlGSVGERYATAI 541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1431 RSDLS------------------DLLKEAQDARRTL--------ENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQ 1484
Cdd:TIGR02169 542 EVAAGnrlnnvvveddavakeaiELLKRRKAGRATFlplnkmrdERRDLSILSEDGVIGFAVDLVEFDPKYEPAFKYVFG 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1485 DkcqklTGEVENMKENLTVEKKARILDKESFLLER-----------MELQNNIGFLEKEVEEMREKNKEFLTEKELLVQE 1553
Cdd:TIGR02169 622 D-----TLVVEDIEAARRLMGKYRMVTLEGELFEKsgamtggsrapRGGILFSRSEPAELQRLRERLEGLKRELSSLQSE 696
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1554 KEK--------------SETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDvhscvsvMLDELQHKYEV 1619
Cdd:TIGR02169 697 LRRienrldelsqelsdASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKS-------ELKELEARIEE 769
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1620 TEKEKMELVQENESLHAEwkslviINEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSCRLLvsegKHELLLEEMSNLA 1699
Cdd:TIGR02169 770 LEEDLHKLEEALNDLEAR------LSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTL----EKEYLEKEIQELQ 839
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1700 LKLREIErlqaqtfmqkfeaDKRAEevlqtmekVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEEL 1779
Cdd:TIGR02169 840 EQRIDLK-------------EQIKS--------IEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQL 898
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024359640 1780 TKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEE 1843
Cdd:TIGR02169 899 RELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEELSLEDVQAELQR 962
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
861-1106 |
6.53e-09 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 61.19 E-value: 6.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 861 AEQSQQETLKTHQEELKK----MQDQLTDMKKQMETSQNQYKDLQAKYeketsemitkhdadikgfkqNLLDAEEALKAA 936
Cdd:COG3206 158 AEAYLEQNLELRREEARKalefLEEQLPELRKELEEAEAALEEFRQKN--------------------GLVDLSEEAKLL 217
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 937 QKKNDELETQAEELKKQAEQAKSLssvLASARKEIELMSDKMRDLISEKE--TLAQERNTLKLEKESLLSQHLEMESKIL 1014
Cdd:COG3206 218 LQQLSELESQLAEARAELAEAEAR---LAALRAQLGSGPDALPELLQSPViqQLRAQLAELEAELAELSARYTPNHPDVI 294
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1015 LVQQDREELwtkNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLL 1094
Cdd:COG3206 295 ALRAQIAAL---RAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEVARELYESLL 371
|
250
....*....|..
gi 2024359640 1095 QQLKELQANKDA 1106
Cdd:COG3206 372 QRLEEARLAEAL 383
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1472-1829 |
9.08e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.72 E-value: 9.08e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1472 DIEILNRERTELQDKCQKLTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLV 1551
Cdd:COG1196 187 NLERLEDILGELERQLEPLERQAEKAERYRELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELE 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1552 QEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVhscvsvmLDELQHKYEVTEKEKMELVQEN 1631
Cdd:COG1196 267 AELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEER-------LEELEEELAELEEELEELEEEL 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1632 ESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQTDAdfscrllvsegkhelLLEEMSNLALKLREIERLQAQ 1711
Cdd:COG1196 340 EELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEE---------------LAEELLEALRAAAELAAQLEE 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1712 TFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENK 1791
Cdd:COG1196 405 LEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLE 484
|
330 340 350
....*....|....*....|....*....|....*...
gi 2024359640 1792 KVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELG 1829
Cdd:COG1196 485 ELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGL 522
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
681-1941 |
9.29e-09 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 61.22 E-value: 9.29e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 681 EIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMedTLNKLQEaeikkekFTSAVDGAENAQRAMQETINKLNQKE 760
Cdd:TIGR01612 460 KLKALEKRFFEIFEEEWGSYDIKKDIDENSKQDNTVKL--ILMRMKD-------FKDIIDFMELYKPDEVPSKNIIGFDI 530
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 761 EQF--ALMSSELEQ-LKSNLTVM----ETKLKEREEREQQlTEAKVKLENDIAEIMKssgdssaQLMKMNDEL----RLK 829
Cdd:TIGR01612 531 DQNikAKLYKEIEAgLKESYELAknwkKLIHEIKKELEEE-NEDSIHLEKEIKDLFD-------KYLEIDDEIiyinKLK 602
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 830 ERQLEQIQlELTKANE---KAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKqmETSQNQYKDLQAKYeK 906
Cdd:TIGR01612 603 LELKEKIK-NISDKNEyikKAIDLKKIIENNNAYIDELAKISPYQVPEHLKNKDKIYSTIKS--ELSKIYEDDIDALY-N 678
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 907 ETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELkkqaeqakSLSSvlasarkeIELMSDKMRDLISE-- 984
Cdd:TIGR01612 679 ELSSIVKENAIDNTEDKAKLDDLKSKIDKEYDKIQNMETATVEL--------HLSN--------IENKKNELLDIIVEik 742
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 985 KETLAQERNTLKLEKESLLSQHLEMESKIllvqqdrEELWTKNEELNSENKKILKQKEAAEAKSRQEST--EKVALISEK 1062
Cdd:TIGR01612 743 KHIHGEINKDLNKILEDFKNKEKELSNKI-------NDYAKEKDELNKYKSKISEIKNHYNDQINIDNIkdEDAKQNYDK 815
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1063 SK-LLSEIETAQADLLKITQEndalrssestlLQQLKELQANKDAVDVACQKHIKEREELEHYQKlleeNDRVIKDKDDV 1141
Cdd:TIGR01612 816 SKeYIKTISIKEDEIFKIINE-----------MKFMKDDFLNKVDKFINFENNCKEKIDSEHEQF----AELTNKIKAEI 880
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1142 IQRLQSSYDDLARNQRELLQEVSiltaerdSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLAN 1221
Cdd:TIGR01612 881 SDDKLNDYEKKFNDSKSLINEIN-------KSIEEEYQNINTLKKVDEYIKICENTKESIEKFHNKQNILKEILNKNIDT 953
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1222 TANENQALKLRKDEMQTELETEREKLEKMTKDnmdlkASLSSLsnfleemkssrEASNSEKIHL---LQEALFASEQRLL 1298
Cdd:TIGR01612 954 IKESNLIEKSYKDKFDNTLIDKINELDKAFKD-----ASLNDY-----------EAKNNELIKYfndLKANLGKNKENML 1017
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1299 ----AEREELVNEnkaVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLqfEKHNEALLREKDELERKYSELlDE 1374
Cdd:TIGR01612 1018 yhqfDEKEKATND---IEQKIEDANKNIPNIEIAIHTSIYNIIDEIEKEIGKNI--ELLNKEILEEAEINITNFNEI-KE 1091
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1375 KKSLENaFSDMKREQELDFS-----AKRLLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEA------QD 1443
Cdd:TIGR01612 1092 KLKHYN-FDDFGKEENIKYAdeinkIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKAQINDLEDVADKAisnddpEE 1170
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1444 ARRTLENELAAVSHAKQVLSSsFNTCSSDIEILNRERTELQdkcqkltgEVENMkeNLTVEKKARILDKESFLLERMELQ 1523
Cdd:TIGR01612 1171 IEKKIENIVTKIDKKKNIYDE-IKKLLNEIAEIEKDKTSLE--------EVKGI--NLSYGKNLGKLFLEKIDEEKKKSE 1239
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1524 NNIGFLEKEVEEMRE-KNKEFLTEKELLVQEKEKSETKLEEV----IKEKMILYKETEQLASKIEQLKSDFTSLSVSKAE 1598
Cdd:TIGR01612 1240 HMIKAMEAYIEDLDEiKEKSPEIENEMGIEMDIKAEMETFNIshddDKDHHIISKKHDENISDIREKSLKIIEDFSEESD 1319
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1599 LEDV--------------HSCVSVMLDELQHKYEVTEKEKM--------ELVQENESLHAEWKSLVIINEEILKE-KEKL 1655
Cdd:TIGR01612 1320 INDIkkelqknlldaqkhNSDINLYLNEIANIYNILKLNKIkkiidevkEYTKEIEENNKNIKDELDKSEKLIKKiKDDI 1399
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1656 SKEYYKlhEKVVALLEQTDADfSCRLLVSEGKHELLLEEMSNLAL--KLREIERLQAQTFMQKFEADKRAEEVLQTmekv 1733
Cdd:TIGR01612 1400 NLEECK--SKIESTLDDKDID-ECIKKIKELKNHILSEESNIDTYfkNADENNENVLLLFKNIEMADNKSQHILKI---- 1472
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1734 tkEKDAIHQEKIETLASLENSRQTNEKLQNELDmlkqnnlKNEEELTKSKELLNLENKKVEELKKEFEALKL------AA 1807
Cdd:TIGR01612 1473 --KKDNATNDHDFNINELKEHIDKSKGCKDEAD-------KNAKAIEKNKELFEQYKKDVTELLNKYSALAIknkfakTK 1543
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1808 AQKSQQLAALQEENVKLAEELGRSRDEVTS--HQKLEEERSVLNNQ-----LLEMKKSL---PSNTLRESTLKKEIDE-- 1875
Cdd:TIGR01612 1544 KDSEIIIKEIKDAHKKFILEAEKSEQKIKEikKEKFRIEDDAAKNDksnkaAIDIQLSLenfENKFLKISDIKKKINDcl 1623
|
1290 1300 1310 1320 1330 1340
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024359640 1876 -ERASLQKSISDTSalITQKDEELEKLRNEITvlrgenasakTLQSVVKTLESDKLKLEEKVKNLEQ 1941
Cdd:TIGR01612 1624 kETESIEKKISSFS--IDSQDTELKENGDNLN----------SLQEFLESLKDQKKNIEDKKKELDE 1678
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
501-889 |
9.51e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 60.85 E-value: 9.51e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 501 RIMELERDLALRVKEVAELRGRL-ESSKHIDDVDTSLSLLQ-EISSLQEKMAAAG---KEHQREMSSLKEKFESSEEALR 575
Cdd:TIGR02169 682 RLEGLKRELSSLQSELRRIENRLdELSQELSDASRKIGEIEkEIEQLEQEEEKLKerlEELEEDLSSLEQEIENVKSELK 761
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 576 KEIKTLSASNERMGKENESLKTKLDHANKENSDVIELWKSKLESAIASHQQAMEELKVSFNKgvgaqtaeFAELKTQMEK 655
Cdd:TIGR02169 762 ELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNR--------LTLEKEYLEK 833
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 656 VKLDYENEMSNLKLKQENEKsqhlKEIEALKAKLlevtEEKEQTLENLKAKLESVEDQHlvemedtlnklqeAEIKKEkf 735
Cdd:TIGR02169 834 EIQELQEQRIDLKEQIKSIE----KEIENLNGKK----EELEEELEELEAALRDLESRL-------------GDLKKE-- 890
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 736 tsaVDGAENAQRAMQETINKLNqkeeqfalmsSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMkSSGDS 815
Cdd:TIGR02169 891 ---RDELEAQLRELERKIEELE----------AQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEEL-SLEDV 956
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024359640 816 SAQLMKMNDELRlkerqleqiqlELTKANEKAVQLQKNVEQTaQKAEQSQQETLKTHQEELKKMQDQLTDMKKQ 889
Cdd:TIGR02169 957 QAELQRVEEEIR-----------ALEPVNMLAIQEYEEVLKR-LDELKEKRAKLEEERKAILERIEEYEKKKRE 1018
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
674-1391 |
9.89e-09 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 60.75 E-value: 9.89e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 674 EKSQHLKEIEALKAKLLEVTEEKEQTLEnLKAKLESVEDQHLVEMEDTLNKLQEAEIKKEKFTSAVDGAENAQRAMQETI 753
Cdd:TIGR00618 164 EKKELLMNLFPLDQYTQLALMEFAKKKS-LHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSH 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 754 NKLNQKEEQFALMSS---ELEQLKSNLTVMETKLKEREEREQQLTEAKVKLEndIAEIMKSSGDSSAQLMKMNDELRLKE 830
Cdd:TIGR00618 243 AYLTQKREAQEEQLKkqqLLKQLRARIEELRAQEAVLEETQERINRARKAAP--LAAHIKAVTQIEQQAQRIHTELQSKM 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 831 RQLEQI--QLELTKANEKAVQLQKNVEQTAQKAEQ------SQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQA 902
Cdd:TIGR00618 321 RSRAKLlmKRAAHVKQQSSIEEQRRLLQTLHSQEIhirdahEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCK 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 903 KYEKETSEMITK--HDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIElmsdkmrD 980
Cdd:TIGR00618 401 ELDILQREQATIdtRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKERE-------Q 473
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 981 LISEKETLAQERNTLKLEKESLLSQHLEMESkiLLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKV---- 1056
Cdd:TIGR00618 474 QLQTKEQIHLQETRKKAVVLARLLELQEEPC--PLCGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLETSEEDVyhql 551
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1057 -ALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVI 1135
Cdd:TIGR00618 552 tSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVR 631
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1136 KDKDDVIQRLQSSYDDLARNQRELLQEvSILTAERDSAQEKDLDLKSTHIALKneidcllqtnrSLQSEKEMLLKSREEL 1215
Cdd:TIGR00618 632 LHLQQCSQELALKLTALHALQLTLTQE-RVREHALSIRVLPKELLASRQLALQ-----------KMQSEKEQLTYWKEML 699
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1216 cvslantaneNQALKLRKDEMQTELETEREkLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQ 1295
Cdd:TIGR00618 700 ----------AQCQTLLRELETHIEEYDRE-FNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNE 768
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1296 RLL------AEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKD----ELE 1365
Cdd:TIGR00618 769 EVTaalqtgAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSatlgEIT 848
|
730 740
....*....|....*....|....*.
gi 2024359640 1366 RKYSELLDEKKSLENAFSDMKREQEL 1391
Cdd:TIGR00618 849 HQLLKYEECSKQLAQLTQEQAKIIQL 874
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1698-1976 |
1.18e-08 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 60.34 E-value: 1.18e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1698 LALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEE 1777
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1778 ELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVtshQKLEEERSVLNNQLLEMKK 1857
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEELEEELEEAEEEL---EEAEAELAEAEEALLEAEA 372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1858 SLPSNTLRESTLKKEIDE---ERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEE 1934
Cdd:COG1196 373 ELAEAEEELEELAEELLEalrAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEA 452
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2024359640 1935 KVKNLEQKLKAKSEQPLTVTsPSGDIAANLLQDESAEDKQQE 1976
Cdd:COG1196 453 ELEEEEEALLELLAELLEEA-ALLEAALAELLEELAEAAARL 493
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
693-905 |
1.99e-08 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 59.65 E-value: 1.99e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 693 TEEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQEaeikKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQ 772
Cdd:COG3206 170 REEARKALEFLEEQLPELRKE-LEEAEAALEEFRQ----KNGLVDLSEEAKLLLQQLSELESQLAEARAELAEAEARLAA 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 773 LKSNLTVMETKLKE--REEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQL 850
Cdd:COG3206 245 LRAQLGSGPDALPEllQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRILASLEAELEA 324
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2024359640 851 QKNVEQTAQKAEQSQQETLKthqeELKKMQDQLTDMKKQMETSQNQYKDLQAKYE 905
Cdd:COG3206 325 LQAREASLQAQLAQLEARLA----ELPELEAELRRLEREVEVARELYESLLQRLE 375
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
855-1426 |
2.46e-08 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 59.28 E-value: 2.46e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 855 EQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYE--KETSEMITKHDADIKgfkqnllDAEEA 932
Cdd:PRK02224 194 AQIEEKEEKDLHERLNGLESELAELDEEIERYEEQREQARETRDEADEVLEehEERREELETLEAEIE-------DLRET 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 933 LKAAQKKNDELetqAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESK 1012
Cdd:PRK02224 267 IAETEREREEL---AEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEE 343
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1013 ILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSEST 1092
Cdd:PRK02224 344 AESLREDADDLEERAEELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDE 423
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1093 LLQQLKELQANKDAVdvacqkhikeREELEHYQKLLEEND-----RVIKDKDDViqrlqssydDLARNQREllqEVSILT 1167
Cdd:PRK02224 424 LREREAELEATLRTA----------RERVEEAEALLEAGKcpecgQPVEGSPHV---------ETIEEDRE---RVEELE 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1168 AERDSAQEKDLDLKSTHIALKNEIDCLLQTNRsLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKL 1247
Cdd:PRK02224 482 AELEDLEEEVEEVEERLERAEDLVEAEDRIER-LEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAA 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1248 EKMTKDNMDLKASLSSLSNFLEEMKSSREASNS-EKIHLLQEALFASEQRLLAEREELVNENKAVTEKL-TKATADAVLA 1325
Cdd:PRK02224 561 AEAEEEAEEAREEVAELNSKLAELKERIESLERiRTLLAAIADAEDEIERLREKREALAELNDERRERLaEKRERKRELE 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1326 ETAFTEKINELNLEKEsvfskslQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKR-EQELDFSAKRL-----L 1399
Cdd:PRK02224 641 AEFDEARIEEAREDKE-------RAEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEElRERREALENRVealeaL 713
|
570 580
....*....|....*....|....*..
gi 2024359640 1400 VQENTTLKYSIEALEEELKKKNLENQE 1426
Cdd:PRK02224 714 YDEAEELESMYGDLRAELRQRNVETLE 740
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
698-921 |
3.02e-08 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 58.24 E-value: 3.02e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 698 QTLENLKAKLESVEDQhlveMEDTLNKLQEAEIKKEKFTSAVdgaENAQRAMQETINKLNQKEEQFALMSSELEQLKSNL 777
Cdd:COG4942 20 DAAAEAEAELEQLQQE----IAELEKELAALKKEEKALLKQL---AALERRIAALARRIRALEQELAALEAELAELEKEI 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 778 TVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMN--------------DELRLKERQLEQIQLELTKA 843
Cdd:COG4942 93 AELRAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLqylkylaparreqaEELRADLAELAALRAELEAE 172
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 844 NEKAVQLQKNVEQ---TAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIK 920
Cdd:COG4942 173 RAELEALLAELEEeraALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALK 252
|
.
gi 2024359640 921 G 921
Cdd:COG4942 253 G 253
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
747-1168 |
4.34e-08 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 58.24 E-value: 4.34e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 747 RAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLEndIAEIMKSSGDSSAQLMKMNDEL 826
Cdd:COG4717 74 KELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLP--LYQELEALEAELAELPERLEEL 151
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 827 RLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEK 906
Cdd:COG4717 152 EERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQ 231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 907 ETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVL--------ASARKEIELMSDKM 978
Cdd:COG4717 232 LENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLflllarekASLGKEAEELQALP 311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 979 RDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQK--EAAEAKSRQESTEKV 1056
Cdd:COG4717 312 ALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAAllAEAGVEDEEELRAAL 391
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1057 ALISEKSKLLSEIETAQADLLKITQENDALRS--SESTLLQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRv 1134
Cdd:COG4717 392 EQAEEYQELKEELEELEEQLEELLGELEELLEalDEEELEEELEELEEELEELEEELEELREELAELEAELEQLEEDGE- 470
|
410 420 430
....*....|....*....|....*....|....
gi 2024359640 1135 ikdkddvIQRLQSSYDDLARNQRELLQEVSILTA 1168
Cdd:COG4717 471 -------LAELLQELEELKAELRELAEEWAALKL 497
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
2069-2085 |
7.43e-08 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 49.77 E-value: 7.43e-08
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1268-1941 |
7.58e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 58.23 E-value: 7.58e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1268 LEEMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAfTEKINELNLEKESVFSKS 1347
Cdd:PTZ00121 1214 AEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKA-EEARKADELKKAEEKKKA 1292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1348 LQFEKHNEAL----LREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELKKKNLE 1423
Cdd:PTZ00121 1293 DEAKKAEEKKkadeAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKK 1372
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1424 NQEliaCRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTV 1503
Cdd:PTZ00121 1373 KEE---AKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEA 1449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1504 EKKARILDKESFLLERMELQNNIGFLEKEVEEMRE-----KNKEFLTEKELLVQEKEKSETKLEEVIKEKMilYKETEQL 1578
Cdd:PTZ00121 1450 KKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKadeakKKAEEAKKKADEAKKAAEAKKKADEAKKAEE--AKKADEA 1527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1579 ASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEK----MELVQENESLHAEWKSLVIINEEILKEKEK 1654
Cdd:PTZ00121 1528 KKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEedknMALRKAEEAKKAEEARIEEVMKLYEEEKKM 1607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1655 LSKEYYKLHEKVVALLEQTDADFSCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVT 1734
Cdd:PTZ00121 1608 KAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDE 1687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1735 KEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQL 1814
Cdd:PTZ00121 1688 KKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEE 1767
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1815 AALQEENVKLAEELGRSRDEVTSHQKLEEERSVlnNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTSALITQK 1894
Cdd:PTZ00121 1768 KKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKI--KDIFDNFANIIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEE 1845
|
650 660 670 680
....*....|....*....|....*....|....*....|....*..
gi 2024359640 1895 DEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQ 1941
Cdd:PTZ00121 1846 ADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEK 1892
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
824-1022 |
8.07e-08 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 56.76 E-value: 8.07e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 824 DELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDlQAK 903
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAE-LEALQAEIDKLQAEIAEAEAEIEERREELGE-RAR 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 904 YEKETSEMITKHDA-----DIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKM 978
Cdd:COG3883 94 ALYRSGGSVSYLDVllgseSFSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAEL 173
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 2024359640 979 RDLISEKE----TLAQERNTLKLEKESLLSQHLEMESKILLVQQDREE 1022
Cdd:COG3883 174 EAQQAEQEallaQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAA 221
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
604-1872 |
1.27e-07 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 57.37 E-value: 1.27e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 604 KENSDVIELWKSKLESAIASHQQAMEELKVSFN----KGVGAQTAEFAELKTQMEKVKLDYenemsNLKLKQENEKSQHL 679
Cdd:TIGR01612 503 KDFKDIIDFMELYKPDEVPSKNIIGFDIDQNIKaklyKEIEAGLKESYELAKNWKKLIHEI-----KKELEEENEDSIHL 577
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 680 -KEIEALKAKLLEVTEE----KEQTLEnLKAKLESVEDQHlvemeDTLNKLQEAEIKKEKFTSAVDgaENAQRAMQETIN 754
Cdd:TIGR01612 578 eKEIKDLFDKYLEIDDEiiyiNKLKLE-LKEKIKNISDKN-----EYIKKAIDLKKIIENNNAYID--ELAKISPYQVPE 649
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 755 KLNQKEEQFALMSSELEQL-KSNLTVMETKLKE-REEREQQLTEAKVKLENdiaeiMKSSGDSSAQLMKmNDELRLKERQ 832
Cdd:TIGR01612 650 HLKNKDKIYSTIKSELSKIyEDDIDALYNELSSiVKENAIDNTEDKAKLDD-----LKSKIDKEYDKIQ-NMETATVELH 723
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 833 LEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETS-EM 911
Cdd:TIGR01612 724 LSNIENKKNELLDIIVEIKKHIHGEINKDLNKILEDFKNKEKELSNKINDYAKEKDELNKYKSKISEIKNHYNDQINiDN 803
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 912 ITKHDAdikgfKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQakslssVLASARKEIELMSDKMRDLISEKETLAQE 991
Cdd:TIGR01612 804 IKDEDA-----KQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDD------FLNKVDKFINFENNCKEKIDSEHEQFAEL 872
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 992 RNTLKLE-KESLLSQHLEM--ESKILLVQQdreelwTKNEELNSENKKILKqKEAAEAKSRQESTEKVALISEKSKLLSE 1068
Cdd:TIGR01612 873 TNKIKAEiSDDKLNDYEKKfnDSKSLINEI------NKSIEEEYQNINTLK-KVDEYIKICENTKESIEKFHNKQNILKE 945
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1069 IETAQADLLKITQ--ENDALRSSESTLLQQLKELQanKDAVDVACQKHIKEREELEHYQKLLEEN-------------DR 1133
Cdd:TIGR01612 946 ILNKNIDTIKESNliEKSYKDKFDNTLIDKINELD--KAFKDASLNDYEAKNNELIKYFNDLKANlgknkenmlyhqfDE 1023
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1134 VIKDKDDVIQRLQSSYDDLARNQ--------------------------RELLQEVSILTAERDSAQEK------DLDLK 1181
Cdd:TIGR01612 1024 KEKATNDIEQKIEDANKNIPNIEiaihtsiyniideiekeigkniellnKEILEEAEINITNFNEIKEKlkhynfDDFGK 1103
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1182 STHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQAlKLRKDEMQTELETEREKLEKMTKDNMDLKASL 1261
Cdd:TIGR01612 1104 EENIKYADEINKIKDDIKNLDQKIDHHIKALEEIKKKSENYIDEIKA-QINDLEDVADKAISNDDPEEIEKKIENIVTKI 1182
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1262 SSLSNFLEEMKS--------SREASNSEKIHLLQEALFASEQRLLAEReelVNENKAVTEKLTKA--------------- 1318
Cdd:TIGR01612 1183 DKKKNIYDEIKKllneiaeiEKDKTSLEEVKGINLSYGKNLGKLFLEK---IDEEKKKSEHMIKAmeayiedldeikeks 1259
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1319 --TADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEAL--LREKD----ELERKYSELLDEKKSLENAFSDMKREQe 1390
Cdd:TIGR01612 1260 peIENEMGIEMDIKAEMETFNISHDDDKDHHIISKKHDENIsdIREKSlkiiEDFSEESDINDIKKELQKNLLDAQKHN- 1338
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1391 ldfSAKRLLVQENTTLkYSIEALEeelKKKNLENQeliacrsdLSDLLKEAQDARRTLENELAAVSHAKQVL--SSSFNT 1468
Cdd:TIGR01612 1339 ---SDINLYLNEIANI-YNILKLN---KIKKIIDE--------VKEYTKEIEENNKNIKDELDKSEKLIKKIkdDINLEE 1403
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1469 CSSDIEilnrerTELQDKcqKLTGEVENMKENltvekKARILDKES----FLLERMELQNNIGFLEKEVEEMREKNKEFL 1544
Cdd:TIGR01612 1404 CKSKIE------STLDDK--DIDECIKKIKEL-----KNHILSEESnidtYFKNADENNENVLLLFKNIEMADNKSQHIL 1470
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1545 TEKE------------LLVQEKEKSETKLEEVIKEKmilyKETEQLASKIEQLKSDFTSLSVSKAELedvhscvsvmldE 1612
Cdd:TIGR01612 1471 KIKKdnatndhdfninELKEHIDKSKGCKDEADKNA----KAIEKNKELFEQYKKDVTELLNKYSAL------------A 1534
|
1130 1140 1150 1160 1170 1180 1190 1200
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1613 LQHKYEVTEKEKMELVQENESLHaewKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSCRLLVSEGKHELLl 1692
Cdd:TIGR01612 1535 IKNKFAKTKKDSEIIIKEIKDAH---KKFILEAEKSEQKIKEIKKEKFRIEDDAAKNDKSNKAAIDIQLSLENFENKFL- 1610
|
1210 1220 1230 1240 1250 1260 1270 1280
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1693 eEMSNLALK----LREIERLQAQ-------TFMQKFEADKRAEEVLQT-MEKVTKEKDAIHQEKIEtlasLENSRQTNEK 1760
Cdd:TIGR01612 1611 -KISDIKKKindcLKETESIEKKissfsidSQDTELKENGDNLNSLQEfLESLKDQKKNIEDKKKE----LDELDSEIEK 1685
|
1290 1300 1310 1320 1330 1340 1350 1360
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1761 LQNELDMLKQN------------NLKNEEELTKSKELLnleNKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEEL 1828
Cdd:TIGR01612 1686 IEIDVDQHKKNyeigiiekikeiAIANKEEIESIKELI---EPTIENLISSFNTNDLEGIDPNEKLEEYNTEIGDIYEEF 1762
|
1370 1380 1390 1400
....*....|....*....|....*....|....*....|....
gi 2024359640 1829 GRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKE 1872
Cdd:TIGR01612 1763 IELYNIIAGCLETVSKEPITYDEIKNTRINAQNEFLKIIEIEKK 1806
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
675-1513 |
1.37e-07 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 57.11 E-value: 1.37e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 675 KSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLES-VED--QHLVEMEDTLNKLQ------EAEIKK-EKFTSAVDGAEN 744
Cdd:pfam01576 69 RKQELEEILHELESRLEEEEERSQQLQNEKKKMQQhIQDleEQLDEEEAARQKLQlekvttEAKIKKlEEDILLLEDQNS 148
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 745 A----QRAMQETINK----LNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSS 816
Cdd:pfam01576 149 KlskeRKLLEERISEftsnLAEEEEKAKSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQ 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 817 AQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNV-EQTAQKAEqsQQETLKTHQEELKKMQDQLTDMKKQMETSQN 895
Cdd:pfam01576 229 AQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIrELEAQISE--LQEDLESERAARNKAEKQRRDLGEELEALKT 306
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 896 QYKDLQAKYEKEtSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQA-EELKKQAEQAKSLSSVLASARKEIElm 974
Cdd:pfam01576 307 ELEDTLDTTAAQ-QELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQAlEELTEQLEQAKRNKANLEKAKQALE-- 383
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 975 sDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSE------------NKKILKQKE 1042
Cdd:pfam01576 384 -SENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSElesvssllneaeGKNIKLSKD 462
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1043 AAEAKSR---------QESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQL----KELQANKDAVDV 1109
Cdd:pfam01576 463 VSSLESQlqdtqellqEETRQKLNLSTRLRQLEDERNSLQEQLEEEEEAKRNVERQLSTLQAQLsdmkKKLEEDAGTLEA 542
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1110 ACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSIL---------------------TA 1168
Cdd:pfam01576 543 LEEGKKRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNLekkqkkfdqmlaeekaisaryAE 622
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1169 ERDSAQEKDLDLKSTHIALKNEIDCLL-------QTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELE 1241
Cdd:pfam01576 623 ERDRAEAEAREKETRALSLARALEEALeakeeleRTNKQLRAEMEDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQLE 702
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1242 TEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAER-------------EELVNEN 1308
Cdd:pfam01576 703 ELEDELQATEDAKLRLEVNMQALKAQFERDLQARDEQGEEKRRQLVKQVRELEAELEDERkqraqavaakkklELDLKEL 782
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1309 KAVTEKLTKATADAV-------LAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENA 1381
Cdd:pfam01576 783 EAQIDAANKGREEAVkqlkklqAQMKDLQRELEEARASRDEILAQSKESEKKLKNLEAELLQLQEDLAASERARRQAQQE 862
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1382 FSDMKREQELDFSAKRLLVQENTTLKYSIEALEEELKKKNLeNQELiacrsdLSDLLKEAQDARRTLENELAAVSHAKQV 1461
Cdd:pfam01576 863 RDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQS-NTEL------LNDRLRKSTLQVEQLTTELAAERSTSQK 935
|
890 900 910 920 930
....*....|....*....|....*....|....*....|....*....|..
gi 2024359640 1462 LSSSFNTcssdieiLNRERTELQDKCQKLTGEVENMKENLTVEKKARILDKE 1513
Cdd:pfam01576 936 SESARQQ-------LERQNKELKAKLQEMEGTVKSKFKSSIAALEAKIAQLE 980
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
919-1543 |
2.03e-07 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 56.23 E-value: 2.03e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 919 IKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIElmsdKMRDLISEKETLAQERNTLKLE 998
Cdd:PRK03918 171 IKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELE----KLEKEVKELEELKEEIEELEKE 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 999 KESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEA--KSRQESTEKVALISEKSKLLSEIETAQADL 1076
Cdd:PRK03918 247 LESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEyiKLSEFYEEYLDELREIEKRLSRLEEEINGI 326
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1077 LKITQENDALRSSESTLLQQLKELQANKDAvdvacqkhIKEREELEHYQKLLEENDRVIKDK--DDVIQRLQSSYDDLAR 1154
Cdd:PRK03918 327 EERIKELEEKEERLEELKKKLKELEKRLEE--------LEERHELYEEAKAKKEELERLKKRltGLTPEKLEKELEELEK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1155 NQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKsrEELCVSLANTANENQALklrkD 1234
Cdd:PRK03918 399 AKEEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEHRKELL--EEYTAELKRIEKELKEI----E 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1235 EMQTELETEREKLEKMTKDNMDLkASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVtek 1314
Cdd:PRK03918 473 EKERKLRKELRELEKVLKKESEL-IKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKEL--- 548
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1315 ltkatadavlaetaftEKINELNLEKesvfskslqfekhnEALLREKDELERKYSELLDEKKSLenAFSDMKrEQELDFS 1394
Cdd:PRK03918 549 ----------------EKLEELKKKL--------------AELEKKLDELEEELAELLKELEEL--GFESVE-ELEERLK 595
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1395 AKRLLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAK-QVLSSSFNTCSSDI 1473
Cdd:PRK03918 596 ELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEyEELREEYLELSREL 675
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1474 EILNRERTELQDKCQKLTGEVENMKENLTVEKKARildKESFLLERMelqnnigflEKEVEEMREKNKEF 1543
Cdd:PRK03918 676 AGLRAELEELEKRREEIKKTLEKLKEELEEREKAK---KELEKLEKA---------LERVEELREKVKKY 733
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
858-1102 |
2.28e-07 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 55.54 E-value: 2.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 858 AQKAEQSQQEtLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKyeketsemITKHDADIKGFKQNLLDAEEALKAAQ 937
Cdd:COG4942 19 ADAAAEAEAE-LEQLQQEIAELEKELAALKKEEKALLKQLAALERR--------IAALARRIRALEQELAALEAELAELE 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 938 KKNDELETQAEELKKQ-AEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLlsqhlemeskillv 1016
Cdd:COG4942 90 KEIAELRAELEAQKEElAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEEL-------------- 155
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1017 QQDREELWTKNEELNSEnkkiLKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQAdllKITQENDALRSSESTLLQQ 1096
Cdd:COG4942 156 RADLAELAALRAELEAE----RAELEALLAELEEERAALEALKAERQKLLARLEKELA---ELAAELAELQQEAEELEAL 228
|
....*.
gi 2024359640 1097 LKELQA 1102
Cdd:COG4942 229 IARLEA 234
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
692-1276 |
2.48e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 56.20 E-value: 2.48e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 692 VTEEKEQTLENLKAKLESVEDQHLVEmedtlnklqeaeikkekftsAVDGAENAQRAMQETINKLNQKEEQFAlmsSELE 771
Cdd:PRK02224 181 VLSDQRGSLDQLKAQIEEKEEKDLHE--------------------RLNGLESELAELDEEIERYEEQREQAR---ETRD 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 772 QLKSNLTVMETKLKEREEREQQLTEakvkLENDIAEIMKSSGDSSaqlmkmnDELRLKERQLEQIQLELTKANEKAvqlq 851
Cdd:PRK02224 238 EADEVLEEHEERREELETLEAEIED----LRETIAETEREREELA-------EEVRDLRERLEELEEERDDLLAEA---- 302
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 852 knveqtaqKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSqnqykdlqakyeketsemITKHDADIKGFKQNLLDAEE 931
Cdd:PRK02224 303 --------GLDDADAEAVEARREELEDRDEELRDRLEECRVA------------------AQAHNEEAESLREDADDLEE 356
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 932 ALKAAQKKNDELETQAEELKKQAEQAKslsSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMES 1011
Cdd:PRK02224 357 RAEELREEAAELESELEEAREAVEDRR---EEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEA 433
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1012 KILLVQQDREElwtkNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSES 1091
Cdd:PRK02224 434 TLRTARERVEE----AEALLEAGKCPECGQPVEGSPHVETIEEDRERVEELEAELEDLEEEVEEVEERLERAEDLVEAED 509
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1092 tllqQLKELQANKDAVdvacqkhikereelehyQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERD 1171
Cdd:PRK02224 510 ----RIERLEERREDL-----------------EELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAE 568
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1172 SAQEKDLDLKSTHIALKNEIDClLQTNRSLQSEKEMLLKSREELCVSLANTANEN-------QALKLRKDEMQTELETER 1244
Cdd:PRK02224 569 EAREEVAELNSKLAELKERIES-LERIRTLLAAIADAEDEIERLREKREALAELNderrerlAEKRERKRELEAEFDEAR 647
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|.
gi 2024359640 1245 -------------------EKLEKMTKDNMDLKASLSSLSNFLEEMKSSRE 1276
Cdd:PRK02224 648 ieearedkeraeeyleqveEKLDELREERDDLQAEIGAVENELEELEELRE 698
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
1708-2022 |
3.05e-07 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 55.85 E-value: 3.05e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1708 LQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIhqeKIETLASLENSRQ-------TNEKLQNELDMLKQNNLKNEEELT 1780
Cdd:COG5022 765 LQALKRIKKIQVIQHGFRLRRLVDYELKWRLFI---KLQPLLSLLGSRKeyrsylaCIIKLQKTIKREKKLRETEEVEFS 841
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1781 KSKELLNLENKKVEELKKEFEALKlaaaqKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLP 1860
Cdd:COG5022 842 LKAEVLIQKFGRSLKAKKRFSLLK-----KETIYLQSAQRVELAERQLQELKIDVKSISSLKLVNLELESEIIELKKSLS 916
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1861 SNTLRESTLKKEID--EERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKN 1938
Cdd:COG5022 917 SDLIENLEFKTELIarLKKLLNNIDLEEGPSIEYVKLPELNKLHEVESKLKETSEEYEDLLKKSTILVREGNKANSELKN 996
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1939 LEQKLKAKSEQPLTVTSPSGDiaANLLQDESAEdKQQEIDFLNSVIVDLQRRNEELNLKiqRMCEAALNGNEEETINYDS 2018
Cdd:COG5022 997 FKKELAELSKQYGALQESTKQ--LKELPVEVAE-LQSASKIISSESTELSILKPLQKLK--GLLLLENNQLQARYKALKL 1071
|
....
gi 2024359640 2019 EEEG 2022
Cdd:COG5022 1072 RREN 1075
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1410-1960 |
5.55e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 55.03 E-value: 5.55e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1410 IEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSH---AKQVLSSSFNTCSSDIEILNRERTELQDK 1486
Cdd:TIGR04523 147 IKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNkllKLELLLSNLKKKIQKNKSLESQISELKKQ 226
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1487 CQKLTGEVENMKENLtVEKKARILDKESFLLERMELQNNIgflekeVEEMREKNKEFLTEKELLVQekekSETKLEEVIK 1566
Cdd:TIGR04523 227 NNQLKDNIEKKQQEI-NEKTTEISNTQTQLNQLKDEQNKI------KKQLSEKQKELEQNNKKIKE----LEKQLNQLKS 295
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1567 EKMILYKETEQLASKieQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVIINE 1646
Cdd:TIGR04523 296 EISDLNNQKEQDWNK--ELKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIE 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1647 EILKEKEKLSKEYYKLHEKVVALLEQtdadFSCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEE- 1725
Cdd:TIGR04523 374 KLKKENQSYKQEIKNLESQINDLESK----IQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKDLTNQd 449
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1726 -VLQTMEKVTKEKDAIHQEKIETL-ASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEAL 1803
Cdd:TIGR04523 450 sVKELIIKNLDNTRESLETQLKVLsRSINKIKQNLEQKQKELKSKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKL 529
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1804 KLAAAQKSQQLAALQEENVKLAEELGRSrdevtshqKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEerasLQKS 1883
Cdd:TIGR04523 530 ESEKKEKESKISDLEDELNKDDFELKKE--------NLEKEIDEKNKEIEELKQTQKSLKKKQEEKQELIDQ----KEKE 597
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024359640 1884 ISDTSALITQKDEELEKLRNEITVLRGENasaktlqsvvKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSGDI 1960
Cdd:TIGR04523 598 KKDLIKEIEEKEKKISSLEKELEKAKKEN----------EKLSSIIKNIKSKKNKLKQEVKQIKETIKEIRNKWPEI 664
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
650-1257 |
5.79e-07 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 55.05 E-value: 5.79e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 650 KTQMEKVKLDYENEMSNLKLKQENEKSQHLKE-IEALKAKLLEVTEEKE----------QTLENLKAKLEsvedqhlvEM 718
Cdd:PRK02224 175 RLGVERVLSDQRGSLDQLKAQIEEKEEKDLHErLNGLESELAELDEEIEryeeqreqarETRDEADEVLE--------EH 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 719 EDTLNKLQEAEIKKEKFTSAVDGAENAQRAMQETINKLNQKEEQfalMSSELEQLKSNLTVMETKLKEREEREQQLTEAK 798
Cdd:PRK02224 247 EERREELETLEAEIEDLRETIAETEREREELAEEVRDLRERLEE---LEEERDDLLAEAGLDDADAEAVEARREELEDRD 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 799 VKLENDIAEIMKSSGDSSAQLmkmnDELRLKERQLEQiqlELTKANEKAVQLQKNVEQTAQKAEqSQQETLKTHQEELKK 878
Cdd:PRK02224 324 EELRDRLEECRVAAQAHNEEA----ESLREDADDLEE---RAEELREEAAELESELEEAREAVE-DRREEIEELEEEIEE 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 879 MQDQLTDMKKQMETSQNQYKDLQAKYEkETSEMITKHDADIKGFKQNLLDAEEALKAAQ----KKNDELETQAEELKKQA 954
Cdd:PRK02224 396 LRERFGDAPVDLGNAEDFLEELREERD-ELREREAELEATLRTARERVEEAEALLEAGKcpecGQPVEGSPHVETIEEDR 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 955 EQAKSLSSVLASARKEIELMSDKMRDLISEKETlAQERNTLKlEKESLLSQHLEMESKILLVQQDR-EELWTKNEELNSE 1033
Cdd:PRK02224 475 ERVEELEAELEDLEEEVEEVEERLERAEDLVEA-EDRIERLE-ERREDLEELIAERRETIEEKRERaEELRERAAELEAE 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1034 nkkiLKQKEAAEAKSRQESTEKvaliseksklLSEIETAQADLLKITQENDALRssesTLLQQLKELQANKDAVDvacqk 1113
Cdd:PRK02224 553 ----AEEKREAAAEAEEEAEEA----------REEVAELNSKLAELKERIESLE----RIRTLLAAIADAEDEIE----- 609
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1114 hiKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDD----LARNQRELLQE-VSILTAERDSAQEKDLDLKSTHIALK 1188
Cdd:PRK02224 610 --RLREKREALAELNDERRERLAEKRERKRELEAEFDEarieEAREDKERAEEyLEQVEEKLDELREERDDLQAEIGAVE 687
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024359640 1189 NEIDCLlqtnRSLQSEKEMLLKSREELcVSLANTANENQAL--KLRKDEMQTELETerekLEKMTKDNMDL 1257
Cdd:PRK02224 688 NELEEL----EELRERREALENRVEAL-EALYDEAEELESMygDLRAELRQRNVET----LERMLNETFDL 749
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
565-1145 |
1.36e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 53.53 E-value: 1.36e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 565 EKFESSEEALRKEIKTLSASNERMGKENESlKTKLDHANKENSDVIELWKSKLESAIASHQQAMEELkvsfnKGVGAQTA 644
Cdd:PRK03918 158 DDYENAYKNLGEVIKEIKRRIERLEKFIKR-TENIEELIKEKEKELEEVLREINEISSELPELREEL-----EKLEKEVK 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 645 EFAELKTQMEKVKLdyENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHlVEMEDTLNK 724
Cdd:PRK03918 232 ELEELKEEIEELEK--ELESLEGSKRKLEEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLS-EFYEEYLDE 308
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 725 LQEAEIKKEKFTSAVDGaenaqraMQETINKLNQKEEqfalmssELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENd 804
Cdd:PRK03918 309 LREIEKRLSRLEEEING-------IEERIKELEEKEE-------RLEELKKKLKELEKRLEELEERHELYEEAKAKKEE- 373
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 805 IAEIMKSSGDSSAQlmKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQ----------QETLKTHQE 874
Cdd:PRK03918 374 LERLKKRLTGLTPE--KLEKELEELEKAKEEIEEEISKITARIGELKKEIKELKKAIEELKkakgkcpvcgRELTEEHRK 451
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 875 EL-KKMQDQLTDMKKQMETSQNQYKDLQAkyEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKN-DELETQAEELKK 952
Cdd:PRK03918 452 ELlEEYTAELKRIEKELKEIEEKERKLRK--ELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNlEELEKKAEEYEK 529
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 953 QAEQAKSLS---SVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESL-LSQHLEMESKIllvqQDREELWTKNE 1028
Cdd:PRK03918 530 LKEKLIKLKgeiKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELgFESVEELEERL----KELEPFYNEYL 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1029 ELnSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQEND---------ALRSSESTLLQQLKE 1099
Cdd:PRK03918 606 EL-KDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEyeelreeylELSRELAGLRAELEE 684
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 2024359640 1100 LQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRL 1145
Cdd:PRK03918 685 LEKRREEIKKTLEKLKEELEEREKAKKELEKLEKALERVEELREKV 730
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
1405-1927 |
1.55e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 53.51 E-value: 1.55e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1405 TLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLEnelaavshakqVLSSSFNTCSSDIEILNRERTELQ 1484
Cdd:PRK02224 210 GLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELE-----------TLEAEIEDLRETIAETEREREELA 278
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1485 DKCQKLTGEVENMKENLT---VEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKL 1561
Cdd:PRK02224 279 EEVRDLRERLEELEEERDdllAEAGLDDADAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAESLREDADDLEERA 358
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1562 EEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKSL 1641
Cdd:PRK02224 359 EELREEAAELESELEEAREAVEDRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTA 438
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1642 viinEEILKEKEKLskeyykLHEKVVALLEQT--DADFSCRLLVSEGKHELLLEEMSNLALKLREIE-RLQAQTFMQKFE 1718
Cdd:PRK02224 439 ----RERVEEAEAL------LEAGKCPECGQPveGSPHVETIEEDRERVEELEAELEDLEEEVEEVEeRLERAEDLVEAE 508
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1719 AD-KRAEEVLQTMEKVTKEKDAIHQEKIETLASLensRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELK 1797
Cdd:PRK02224 509 DRiERLEERREDLEELIAERRETIEEKRERAEEL---RERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLAELK 585
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1798 KEFEALK------LAAAQKSQQLAALQEENVKLAEELGRSRDEVTS----HQKLEEERSVLNNQLLEMKKSLPSNTLRES 1867
Cdd:PRK02224 586 ERIESLErirtllAAIADAEDEIERLREKREALAELNDERRERLAEkrerKRELEAEFDEARIEEAREDKERAEEYLEQV 665
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024359640 1868 TLK-KEIDEERASLQKSIsdtsALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLES 1927
Cdd:PRK02224 666 EEKlDELREERDDLQAEI----GAVENELEELEELRERREALENRVEALEALYDEAEELES 722
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
649-1138 |
1.85e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 53.19 E-value: 1.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 649 LKTQMEKVKLDYENEMSNLKLKQEneksqhlkEIEALKAKLLEVTEEKEQTLENLKaKLESVEDQHLVEMEDTLNKLQEA 728
Cdd:pfam05483 294 LTKELEDIKMSLQRSMSTQKALEE--------DLQIATKTICQLTEEKEAQMEELN-KAKAAHSFVVTEFEATTCSLEEL 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 729 -EIKKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAE 807
Cdd:pfam05483 365 lRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFL 444
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 808 IM---KSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQET------LKTHQEELKK 878
Cdd:pfam05483 445 LQareKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENKELTQEAsdmtleLKKHQEDIIN 524
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 879 MQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHD---ADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAE 955
Cdd:pfam05483 525 CKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDevkCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLKKQIE 604
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 956 QAKSLSSVLASARKEIELMSDKMRDLISEKETlaqERNTLKLEKESLLSQHLEM----ESKILLVQQDREELWTKNEELN 1031
Cdd:pfam05483 605 NKNKNIEELHQENKALKKKGSAENKQLNAYEI---KVNKLELELASAKQKFEEIidnyQKEIEDKKISEEKLLEEVEKAK 681
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1032 SENKKILKQKEAAEAKSRQESTEKVALISEKS----KLLSEIETAQADLLKITQENDALRSSESTLLQQLK-ELQANKDA 1106
Cdd:pfam05483 682 AIADEAVKLQKEIDKRCQHKIAEMVALMEKHKhqydKIIEERDSELGLYKNKEQEQSSAKAALEIELSNIKaELLSLKKQ 761
|
490 500 510
....*....|....*....|....*....|..
gi 2024359640 1107 VDVacqkhikEREELEHYQKLLEENDRVIKDK 1138
Cdd:pfam05483 762 LEI-------EKEEKEKLKMEAKENTAILKDK 786
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
375-762 |
2.09e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.15 E-value: 2.09e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 375 ERAEVAKATSHVGEIEQELALVRDGHDR---HVLEMEAKMDQLRAMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESI 451
Cdd:TIGR02169 672 EPAELQRLRERLEGLKRELSSLQSELRRienRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQ 751
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 452 TKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMElerdlalrvKEVAELRGRLesskhiDD 531
Cdd:TIGR02169 752 EIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKLE---------EEVSRIEARL------RE 816
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 532 VDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKEnsdvie 611
Cdd:TIGR02169 817 IEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKE------ 890
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 612 lwKSKLESAIASHQQAMEELKVSFNKgvgaQTAEFAELKTQMEKVKldYENEMSNLKLKQENEKSQHLKEIEALKAKLLE 691
Cdd:TIGR02169 891 --RDELEAQLRELERKIEELEAQIEK----KRKRLSELKAKLEALE--EELSEIEDPKGEDEEIPEEELSLEDVQAELQR 962
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024359640 692 VTEEKEqtlenlkaKLESVEDQHLVEMEDTLNKLQEAEIKKEKFtsavdgaENAQRAMQETINKLNQKEEQ 762
Cdd:TIGR02169 963 VEEEIR--------ALEPVNMLAIQEYEEVLKRLDELKEKRAKL-------EEERKAILERIEEYEKKKRE 1018
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
1270-1949 |
2.65e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 52.66 E-value: 2.65e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1270 EMKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKS-- 1347
Cdd:TIGR00618 179 TQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAYLTQKREAQEEQLkk 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1348 -------------LQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKRE----QELDFSAKRLLVQENTTLKYSI 1410
Cdd:TIGR00618 259 qqllkqlrarieeLRAQEAVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIhtelQSKMRSRAKLLMKRAAHVKQQS 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1411 EALEEELKKKNLENQE-LIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRErtelQDKCQK 1489
Cdd:TIGR00618 339 SIEEQRRLLQTLHSQEiHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTLTQKLQSLCKELDILQRE----QATIDT 414
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1490 LTGEVENMKENLTVEKKARILDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEK---EKSETKLEEVIK 1566
Cdd:TIGR00618 415 RTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEKLEKIHLQESAQSLKEREQQLQTKEqihLQETRKKAVVLA 494
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1567 EKMILYKETEQLASKIEQLKSDFTSLSVSKA------ELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKS 1640
Cdd:TIGR00618 495 RLLELQEEPCPLCGSCIHPNPARQDIDNPGPltrrmqRGEQTYAQLETSEEDVYHQLTSERKQRASLKEQMQEIQQSFSI 574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1641 LVIINEEILKEKEKLSKEyyklhekVVALLEQTDADFSCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEAD 1720
Cdd:TIGR00618 575 LTQCDNRSKEDIPNLQNI-------TVRLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTA 647
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1721 KRAEEVLQTMEKVTKEKDAIHQEKIETLASlensrqtNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEF 1800
Cdd:TIGR00618 648 LHALQLTLTQERVREHALSIRVLPKELLAS-------RQLALQKMQSEKEQLTYWKEMLAQCQTLLRELETHIEEYDREF 720
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1801 EALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKeidEERASL 1880
Cdd:TIGR00618 721 NEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAELSHLAAEIQFFN---RLREED 797
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024359640 1881 QKSISDTSALITQK--DEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQ 1949
Cdd:TIGR00618 798 THLLKTLEAEIGQEipSDEDILNLQCETLVQEEEQFLSRLEEKSATLGEITHQLLKYEECSKQLAQLTQEQ 868
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
953-1176 |
7.31e-06 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 50.53 E-value: 7.31e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 953 QAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNS 1032
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1033 ---ENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQEN-DALRSSESTLLQQLKELQANKDAVD 1108
Cdd:COG4942 98 eleAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQaEELRADLAELAALRAELEAERAELE 177
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359640 1109 VACQKHIKEREELEhyqKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEK 1176
Cdd:COG4942 178 ALLAELEEERAALE---ALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
857-1102 |
9.06e-06 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 50.21 E-value: 9.06e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 857 TAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKyeketsemITKHDADIKGFKQNLLDAEEALKAA 936
Cdd:COG3883 13 FADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAE--------LEALQAEIDKLQAEIAEAEAEIEER 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 937 QkknDELETQAEELKKQAEQAKSLSSVLASA--------RKEIELMSDKMRDLISEketLAQERNTLKLEKESLlsqhle 1008
Cdd:COG3883 85 R---EELGERARALYRSGGSVSYLDVLLGSEsfsdfldrLSALSKIADADADLLEE---LKADKAELEAKKAEL------ 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1009 meskillvQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRS 1088
Cdd:COG3883 153 --------EAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAA 224
|
250
....*....|....
gi 2024359640 1089 SESTLLQQLKELQA 1102
Cdd:COG3883 225 AAAAAAAAAAAAAA 238
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
876-1544 |
9.37e-06 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 50.81 E-value: 9.37e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 876 LKKMQDQLTDMKKQMEtsQNQYKDLQAK---YEKETSEMitkhDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKK 952
Cdd:PRK02224 182 LSDQRGSLDQLKAQIE--EKEEKDLHERlngLESELAEL----DEEIERYEEQREQARETRDEADEVLEEHEERREELET 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 953 QAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKEsllsqhLEmESKILLVQQDREELWTKNEELNS 1032
Cdd:PRK02224 256 LEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAG------LD-DADAEAVEARREELEDRDEELRD 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1033 EnkkILKQKEAAEAKSrqestekvalisekskllSEIETAQADLLKITQENDALRSSESTLLqqlKELQANKDAVDvacq 1112
Cdd:PRK02224 329 R---LEECRVAAQAHN------------------EEAESLREDADDLEERAEELREEAAELE---SELEEAREAVE---- 380
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1113 khiKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKdldlksthialKNEID 1192
Cdd:PRK02224 381 ---DRREEIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELREREAELEATLRTARER-----------VEEAE 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1193 CLLQTNRSLQSEKEmlLKSREELCVslantanenqalklrkdemqteLETEREKLEKMTKDNMDLKASLSSLSNFLEEMK 1272
Cdd:PRK02224 447 ALLEAGKCPECGQP--VEGSPHVET----------------------IEEDRERVEELEAELEDLEEEVEEVEERLERAE 502
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1273 SSREASnsEKIHLLQEALFASEQRLlAEREELVNENKAVTEKLTKATAdavlaetaftekinELNLEKESVFSKSLQFEK 1352
Cdd:PRK02224 503 DLVEAE--DRIERLEERREDLEELI-AERRETIEEKRERAEELRERAA--------------ELEAEAEEKREAAAEAEE 565
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1353 HNEALLREKDELERKYSELLDEKKSLENAFSDMKReqeldfsakrllvqenttlkysIEALEEELKKKNlENQELIACRS 1432
Cdd:PRK02224 566 EAEEAREEVAELNSKLAELKERIESLERIRTLLAA----------------------IADAEDEIERLR-EKREALAELN 622
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1433 DLS-DLLKEAQDARRTLENEL--AAVSHAKQVLSSsFNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLT------V 1503
Cdd:PRK02224 623 DERrERLAEKRERKRELEAEFdeARIEEAREDKER-AEEYLEQVEEKLDELREERDDLQAEIGAVENELEELEelrerrE 701
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 2024359640 1504 EKKARILDKESFLLERMELQNNIGFLEKeveEMREKNKEFL 1544
Cdd:PRK02224 702 ALENRVEALEALYDEAEELESMYGDLRA---ELRQRNVETL 739
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
1575-1924 |
1.20e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 50.84 E-value: 1.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1575 TEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQH------KYEVTEKEKMELvqENESLHAEWKSLVIINEEI 1648
Cdd:TIGR02169 165 VAEFDRKKEKALEELEEVEENIERLDLIIDEKRQQLERLRRerekaeRYQALLKEKREY--EGYELLKEKEALERQKEAI 242
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1649 LKEKEKLSKEYYKLHEKVVALLEQTDAdfscrllvsegkHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRA----- 1723
Cdd:TIGR02169 243 ERQLASLEEELEKLTEEISELEKRLEE------------IEQLLEELNKKIKDLGEEEQLRVKEKIGELEAEIASlersi 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1724 EEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKqnnlkneEELTKSKELLNLENKKVEELKKEFEAL 1803
Cdd:TIGR02169 311 AEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLT-------EEYAELKEELEDLRAELEEVDKEFAET 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1804 KLAAAQKSQQLAALQEENVKLAEELGRSRDEVtshQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDE---ERASL 1880
Cdd:TIGR02169 384 RDELKDYREKLEKLKREINELKRELDRLQEEL---QRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKqewKLEQL 460
|
330 340 350 360
....*....|....*....|....*....|....*....|....
gi 2024359640 1881 QKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKT 1924
Cdd:TIGR02169 461 AADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEE 504
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
1567-1956 |
1.27e-05 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 50.51 E-value: 1.27e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1567 EKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDvhSCVSVMLDELQHKYEVTEKEKMELVQ--ENESLHAEwkslvii 1644
Cdd:pfam17380 234 EKMERRKESFNLAEDVTTMTPEYTVRYNGQTMTEN--EFLNQLLHIVQHQKAVSERQQQEKFEkmEQERLRQE------- 304
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1645 NEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSCRLLVSEGKHELlleEMSNLALKLREIERLQAQTFMQKFEADKRAE 1724
Cdd:pfam17380 305 KEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMEREREL---ERIRQEERKRELERIRQEEIAMEISRMRELE 381
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1725 ----EVLQTMEKVTKEKDAIHQEKIetlasLENSRQTNEKLQneldMLKQNNLKNEEELTKSKELLNLEnkkvEELKKEF 1800
Cdd:pfam17380 382 rlqmERQQKNERVRQELEAARKVKI-----LEEERQRKIQQQ----KVEMEQIRAEQEEARQREVRRLE----EERAREM 448
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1801 EALKLAAAQKSQQLAAL-QEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERAS 1879
Cdd:pfam17380 449 ERVRLEEQERQQQVERLrQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKRKLLEKEMEERQKA 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1880 L----QKSISDTSALITQKDEELEKLRNEITVLRGEnasaktlQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTS 1955
Cdd:pfam17380 529 IyeeeRRREAEEERRKQQEMEERRRIQEQMRKATEE-------RSRLEAMEREREMMRQIVESEKARAEYEATTPITTIK 601
|
.
gi 2024359640 1956 P 1956
Cdd:pfam17380 602 P 602
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
688-1366 |
1.30e-05 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 50.61 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 688 KLLEVTEEKEQTLENLKAKL-ESVEDQHLVEMEDTLNKlQEAEIKKEKFTSAVDGAENAQRA--MQETINKLNQKEEQFA 764
Cdd:pfam12128 183 KIAKAMHSKEGKFRDVKSMIvAILEDDGVVPPKSRLNR-QQVEHWIRDIQAIAGIMKIRPEFtkLQQEFNTLESAELRLS 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 765 LMSSELeqlKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEimkssgdSSAQLmkmNDELRLKERQLEQIQLELTKAN 844
Cdd:pfam12128 262 HLHFGY---KSDETLIASRQEERQETSAELNQLLRTLDDQWKE-------KRDEL---NGELSAADAAVAKDRSELEALE 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 845 EKAVQLQknveqtaqkaeQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQ 924
Cdd:pfam12128 329 DQHGAFL-----------DADIETAAADQEQLPSWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKD 397
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 925 NLLDA-EEALKAAQKKNDELETQAEELKKQAEQAKSLSSV----LASARKEIELMSDKMRDLISEKETLAQERNTLKLEK 999
Cdd:pfam12128 398 KLAKIrEARDRQLAVAEDDLQALESELREQLEAGKLEFNEeeyrLKSRLGELKLRLNQATATPELLLQLENFDERIERAR 477
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1000 ESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALIS-----------EKSKLLSE 1068
Cdd:pfam12128 478 EEQEAANAEVERLQSELRQARKRRDQASEALRQASRRLEERQSALDELELQLFPQAGTLLHflrkeapdweqSIGKVISP 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1069 IETAQADLlkITQENDALRSSESTLL------------------QQLK-ELQANKDAVDVACQKHIKEREELEHYQKLLE 1129
Cdd:pfam12128 558 ELLHRTDL--DPEVWDGSVGGELNLYgvkldlkridvpewaaseEELReRLDKAEEALQSAREKQAAAEEQLVQANGELE 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1130 ENDRvikDKDDVIQRLQSSYDDLAR----NQRELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNR--SLQS 1203
Cdd:pfam12128 636 KASR---EETFARTALKNARLDLRRlfdeKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKeqKREA 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1204 EKEMLLKSRE---ELCVSLA----NTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSRE 1276
Cdd:pfam12128 713 RTEKQAYWQVvegALDAQLAllkaAIAARRSGAKAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQ 792
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1277 ASNSEKIhLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAvlaetafteKINELNLEKESVFSKSLQFEKhNEA 1356
Cdd:pfam12128 793 EVLRYFD-WYQETWLQRRPRLATQLSNIERAISELQQQLARLIADT---------KLRRAKLEMERKASEKQQVRL-SEN 861
|
730
....*....|
gi 2024359640 1357 LLREKDELER 1366
Cdd:pfam12128 862 LRGLRCEMSK 871
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
758-1637 |
1.46e-05 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 50.56 E-value: 1.46e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 758 QKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKvkleNDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQ 837
Cdd:pfam01576 2 RQEEEMQAKEEELQKVKERQQKAESELKELEKKHQQLCEEK----NALQEQLQAETELCAEAEEMRARLAARKQELEEIL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 838 LEltkanekavqLQKNVEQTAQKAEQSQQETlkthqeelKKMQDQLTDMKKQMETSQNQYKDLQakYEKETSEmitkhdA 917
Cdd:pfam01576 78 HE----------LESRLEEEEERSQQLQNEK--------KKMQQHIQDLEEQLDEEEAARQKLQ--LEKVTTE------A 131
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 918 DIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQA----EQAKSLSSVLASARKEIELMSDKMRDliSEKETLAQERN 993
Cdd:pfam01576 132 KIKKLEEDILLLEDQNSKLSKERKLLEERISEFTSNLaeeeEKAKSLSKLKNKHEAMISDLEERLKK--EEKGRQELEKA 209
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 994 TLKLEKES--LLSQHLEMESKI--LLVQQDREE-------------------LWTKNEELNSENKKILKQKEAAEAKSRQ 1050
Cdd:pfam01576 210 KRKLEGEStdLQEQIAELQAQIaeLRAQLAKKEeelqaalarleeetaqknnALKKIRELEAQISELQEDLESERAARNK 289
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1051 ESTEKVALISEKSKLLSEIETAQaDLLKITQENDALRSSESTLLQ------------------------------QLKEL 1100
Cdd:pfam01576 290 AEKQRRDLGEELEALKTELEDTL-DTTAAQQELRSKREQEVTELKkaleeetrsheaqlqemrqkhtqaleelteQLEQA 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1101 QANKDAVDVACQKHIKEREELEHYQKLLE----ENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEK 1176
Cdd:pfam01576 369 KRNKANLEKAKQALESENAELQAELRTLQqakqDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSL 448
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1177 DLDLKSTHIALKNEIDCLlqtNRSLQSEKEMLlksREELCVSLANTANENQaLKLRKDEMQTELETEREKLEKMTKDNMD 1256
Cdd:pfam01576 449 LNEAEGKNIKLSKDVSSL---ESQLQDTQELL---QEETRQKLNLSTRLRQ-LEDERNSLQEQLEEEEEAKRNVERQLST 521
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1257 LKASLSSLSNFLEEMKSSREASNSEKIHLLQEALFASEQrlLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINEL 1336
Cdd:pfam01576 522 LQAQLSDMKKKLEEDAGTLEALEEGKKRLQRELEALTQQ--LEEKAAAYDKLEKTKNRLQQELDDLLVDLDHQRQLVSNL 599
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1337 NlEKESVFSKSLQFEK-----------HNEALLREKD----ELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQ 1401
Cdd:pfam01576 600 E-KKQKKFDQMLAEEKaisaryaeerdRAEAEAREKEtralSLARALEEALEAKEELERTNKQLRAEMEDLVSSKDDVGK 678
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1402 ENTTLKYSIEALEEELkkknlenQELIACRSDLSDLLKEAQDARRTLENELAAV---------------SHAKQVLSSSF 1466
Cdd:pfam01576 679 NVHELERSKRALEQQV-------EEMKTQLEELEDELQATEDAKLRLEVNMQALkaqferdlqardeqgEEKRRQLVKQV 751
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1467 NTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTVEKKARildkESFLLERMELQNNIGFLEKEVEEMREKNKEFL-- 1544
Cdd:pfam01576 752 RELEAELEDERKQRAQAVAAKKKLELDLKELEAQIDAANKGR----EEAVKQLKKLQAQMKDLQRELEEARASRDEILaq 827
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1545 ---TEKELLVQEKE--KSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEV 1619
Cdd:pfam01576 828 skeSEKKLKNLEAEllQLQEDLAASERARRQAQQERDELADEIASGASGKSALQDEKRRLEARIAQLEEELEEEQSNTEL 907
|
970
....*....|....*...
gi 2024359640 1620 TEKEKMELVQENESLHAE 1637
Cdd:pfam01576 908 LNDRLRKSTLQVEQLTTE 925
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
480-1248 |
2.15e-05 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 49.96 E-value: 2.15e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 480 KADKLQRELEDTRVATVSEKSRIMELERDLAlrvkEVAELRGRLESSkhIDDVDTSLSLLQEISSLQEKmaaaGKEHQRE 559
Cdd:PRK04863 287 EALELRRELYTSRRQLAAEQYRLVEMARELA----ELNEAESDLEQD--YQAASDHLNLVQTALRQQEK----IERYQAD 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 560 MSSLKEKFESSEEAlRKEIKTLSASNERMGKENE----SLKTKLdhankenSDVIELWKSKLESAIASHQ--QAMEELKV 633
Cdd:PRK04863 357 LEELEERLEEQNEV-VEEADEQQEENEARAEAAEeevdELKSQL-------ADYQQALDVQQTRAIQYQQavQALERAKQ 428
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 634 -----SFN-KGVGAQTAEF-AELKTQMEKVkLDYENEMSNlklkQENEKSQHLK----------EIEALKAKllEVTEEK 696
Cdd:PRK04863 429 lcglpDLTaDNAEDWLEEFqAKEQEATEEL-LSLEQKLSV----AQAAHSQFEQayqlvrkiagEVSRSEAW--DVAREL 501
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 697 EQTLENLKAKLESVE--DQHLVEMEDTLNK-------LQEAEIKKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMS 767
Cdd:PRK04863 502 LRRLREQRHLAEQLQqlRMRLSELEQRLRQqqraerlLAEFCKRLGKNLDDEDELEQLQEELEARLESLSESVSEARERR 581
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 768 SELEQLKSNLTVMETKLKEREEREQQLTEAKVKLEndiaEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEka 847
Cdd:PRK04863 582 MALRQQLEQLQARIQRLAARAPAWLAAQDALARLR----EQSGEEFEDSQDVTEYMQQLLERERELTVERDELAARKQ-- 655
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 848 vQLQKNVEQTAQkAEQSQQETLKTHQEELK-----------KMQD------------------QLTDMKKQMETSQNQYK 898
Cdd:PRK04863 656 -ALDEEIERLSQ-PGGSEDPRLNALAERFGgvllseiyddvSLEDapyfsalygparhaivvpDLSDAAEQLAGLEDCPE 733
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 899 DLQakyeketseMITkhdADIKGFKQNLLDAEEALKA-AQKKND-EL----------------ETQAEELKKQAEQAKSL 960
Cdd:PRK04863 734 DLY---------LIE---GDPDSFDDSVFSVEELEKAvVVKIADrQWrysrfpevplfgraarEKRIEQLRAEREELAER 801
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 961 SSVLASARKEIELMSDKMRDLISEKETLA---------QERNTLKLEKESLLSQHlemESKIllvQQDREELWTKNEELN 1031
Cdd:PRK04863 802 YATLSFDVQKLQRLHQAFSRFIGSHLAVAfeadpeaelRQLNRRRVELERALADH---ESQE---QQQRSQLEQAKEGLS 875
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1032 SENK-----KILK----QKEAAEAKSRQESTEKVAL-ISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQ 1101
Cdd:PRK04863 876 ALNRllprlNLLAdetlADRVEEIREQLDEAEEAKRfVQQHGNALAQLEPIVSVLQSDPEQFEQLKQDYQQAQQTQRDAK 955
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1102 ANKDAVD--VACQKH-----------------IKEREELEHYQKLLEENDRVIKDKDD-------VIQRLQSSYDDLARN 1155
Cdd:PRK04863 956 QQAFALTevVQRRAHfsyedaaemlaknsdlnEKLRQRLEQAEQERTRAREQLRQAQAqlaqynqVLASLKSSYDAKRQM 1035
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1156 QRELLQEVSILTAERDSAQEKDLDLKsthialKNEIDCLLQTNRSLQSEKEMLLKSREElcvslantANENQALKLRKde 1235
Cdd:PRK04863 1036 LQELKQELQDLGVPADSGAEERARAR------RDELHARLSANRSRRNQLEKQLTFCEA--------EMDNLTKKLRK-- 1099
|
890
....*....|...
gi 2024359640 1236 MQTELETEREKLE 1248
Cdd:PRK04863 1100 LERDYHEMREQVV 1112
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
708-951 |
2.17e-05 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 49.63 E-value: 2.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 708 ESVED----QHLVEMeDTLNKLQEAEIKKEkftsaVDGAENAQRAMQETInKLNQK--EEQFALMSSELEQLKSnltVME 781
Cdd:PHA02562 154 KLVEDlldiSVLSEM-DKLNKDKIRELNQQ-----IQTLDMKIDHIQQQI-KTYNKniEEQRKKNGENIARKQN---KYD 223
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 782 TKLKEREEREQQLTEakvkLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLE---------------------- 839
Cdd:PHA02562 224 ELVEEAKTIKAEIEE----LTDELLNLVMDIEDPSAALNKLNTAAAKIKSKIEQFQKVikmyekggvcptctqqisegpd 299
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 840 -LTKANEKAVQLQKNVEQ--TAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITkHD 916
Cdd:PHA02562 300 rITKIKDKLKELQHSLEKldTAIDELEEIMDEFNEQSKKLLELKNKISTNKQSLITLVDKAKKVKAAIEELQAEFVD-NA 378
|
250 260 270
....*....|....*....|....*....|....*
gi 2024359640 917 ADIKGFKQNLLDAEEALKAAQKKNDELETQAEELK 951
Cdd:PHA02562 379 EELAKLQDELDKIVKTKSELVKEKYHRGIVTDLLK 413
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
1871-2001 |
2.31e-05 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 49.47 E-value: 2.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1871 KEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASaktlqsvvktLESDKLKLEEKVKNLEQKLK-AKSEQ 1949
Cdd:COG2433 388 KELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLEAEVEE----------LEAELEEKDERIERLERELSeARSEE 457
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|..
gi 2024359640 1950 PltvtspsgdiaANLLQDESAEDKQQEIDFLNSVIVDLQRRNEELNLKIQRM 2001
Cdd:COG2433 458 R-----------REIRKDREISRLDREIERLERELEEERERIEELKRKLERL 498
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
337-584 |
2.35e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 49.91 E-value: 2.35e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 337 LTETSSRYARKISGTTALQEALKEKQQHIEQLlAERDLERAEVAKATSHVGEIEQELALVRDGHDRhVLEMEAKMDQLRA 416
Cdd:COG4913 622 LEEELAEAEERLEALEAELDALQERREALQRL-AEYSWDEIDVASAEREIAELEAELERLDASSDD-LAALEEQLEELEA 699
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 417 MVEAADREKVELLNQLEEEKRKVEDLQFRVEeesitkgdlETQTKLEHA-RIKELEQSLLFEKtkadKLQRELEDTRVAT 495
Cdd:COG4913 700 ELEELEEELDELKGEIGRLEKELEQAEEELD---------ELQDRLEAAeDLARLELRALLEE----RFAAALGDAVERE 766
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 496 VSEksrimELERDLALRVKEVAELRGRLESSKH---------IDDVDTSLS-------LLQEISS-----LQEKMAAAGK 554
Cdd:COG4913 767 LRE-----NLEERIDALRARLNRAEEELERAMRafnrewpaeTADLDADLEslpeylaLLDRLEEdglpeYEERFKELLN 841
|
250 260 270
....*....|....*....|....*....|.
gi 2024359640 555 EH-QREMSSLKEKFESSEEALRKEIKTLSAS 584
Cdd:COG4913 842 ENsIEFVADLLSKLRRAIREIKERIDPLNDS 872
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
1435-1949 |
2.52e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 49.33 E-value: 2.52e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1435 SDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKEN---LTVEKKARILD 1511
Cdd:pfam05483 281 DENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAhsfVVTEFEATTCS 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1512 KESFL-LERMELQNNIGFLEKEVEEMREKNKEfLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFT 1590
Cdd:pfam05483 361 LEELLrTEQQRLEKNEDQLKIITMELQKKSSE-LEEMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQ 439
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1591 SLS----VSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQE---NESLHAEWKSLVIINEEILKEKEKLSKEYYKLH 1663
Cdd:pfam05483 440 ELIfllqAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEklkNIELTAHCDKLLLENKELTQEASDMTLELKKHQ 519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1664 EKVVALLEQTDAdfscrllvsegkhellleemsnlalKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDaihqe 1743
Cdd:pfam05483 520 EDIINCKKQEER-------------------------MLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLD----- 569
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1744 KIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELtkskellnlENKKVEELKKEFEALKLAAAQKSQQLAALQEENVK 1823
Cdd:pfam05483 570 KSEENARSIEYEVLKKEKQMKILENKCNNLKKQIEN---------KNKNIEELHQENKALKKKGSAENKQLNAYEIKVNK 640
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1824 LAEELGRSRDE----VTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEErasLQKSISDTSALITQKDEELE 1899
Cdd:pfam05483 641 LELELASAKQKfeeiIDNYQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKR---CQHKIAEMVALMEKHKHQYD 717
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|.
gi 2024359640 1900 KLRNEITVLRGENASAKTLQSVVK-TLESDKLKLEEKVKNLEQKLKAKSEQ 1949
Cdd:pfam05483 718 KIIEERDSELGLYKNKEQEQSSAKaALEIELSNIKAELLSLKKQLEIEKEE 768
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
941-1513 |
3.76e-05 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 49.13 E-value: 3.76e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 941 DELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDR 1020
Cdd:PRK01156 176 DMLRAEISNIDYLEEKLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMKNRYE 255
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1021 EELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVA---LISEKSKLLSEIEtaqaDLLKITQENDALRSSESTLLQQL 1097
Cdd:PRK01156 256 SEIKTAESDLSMELEKNNYYKELEERHMKIINDPVYKnrnYINDYFKYKNDIE----NKKQILSNIDAEINKYHAIIKKL 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1098 KELQANKDAVdvacQKHIKEREELEH-----------YQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSIL 1166
Cdd:PRK01156 332 SVLQKDYNDY----IKKKSRYDDLNNqilelegyemdYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAI 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1167 TAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLlkSREELCVSLANTANENQALKLRKD--EMQTELETER 1244
Cdd:PRK01156 408 KKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEML--NGQSVCPVCGTTLGEEKSNHIINHynEKKSRLEEKI 485
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1245 EKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEAL--FASEQRLLAER----EELVNENKAVTEKLTKA 1318
Cdd:PRK01156 486 REIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARADLedIKIKINELKDKhdkyEEIKNRYKSLKLEDLDS 565
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1319 TADAVLAETAFTEKINELNLEKesvfskslQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELdFSAKRL 1398
Cdd:PRK01156 566 KRTSWLNALAVISLIDIETNRS--------RSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANN-LNNKYN 636
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1399 LVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILN- 1477
Cdd:PRK01156 637 EIQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSd 716
|
570 580 590 600
....*....|....*....|....*....|....*....|.
gi 2024359640 1478 -----RERTELQDKCQKLTGEVENMKENLTVEKKARILDKE 1513
Cdd:PRK01156 717 rindiNETLESMKKIKKAIGDLKRLREAFDKSGVPAMIRKS 757
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
611-1005 |
5.21e-05 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 48.80 E-value: 5.21e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 611 ELWKSKleSAIASHQQAMEELkvsfnkgvgaqTAEFAELKTQMEKVKLDYENEMSNLKLKQE----NEKSQHLKE-IEAL 685
Cdd:COG3096 293 ELFGAR--RQLAEEQYRLVEM-----------ARELEELSARESDLEQDYQAASDHLNLVQTalrqQEKIERYQEdLEEL 359
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 686 KAKLLE---VTEEKEQTLENLKAKLESVEDQH------LVEMEDTLNKLQEAEIKkekFTSAVDGAENAQRAMQETINKL 756
Cdd:COG3096 360 TERLEEqeeVVEEAAEQLAEAEARLEAAEEEVdslksqLADYQQALDVQQTRAIQ---YQQAVQALEKARALCGLPDLTP 436
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 757 NQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSA-QLMKMNDELRLKERQLEQ 835
Cdd:COG3096 437 ENAEDYLAAFRAKEQQATEEVLELEQKLSVADAARRQFEKAYELVCKIAGEVERSQAWQTArELLRRYRSQQALAQRLQQ 516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 836 IQLELTKAnEKAVQLQKNVEQTAQKAEQSQ------QETLKTHQEELKKMQDQLTDmkkQMETSQNQYKDLQAKyekets 909
Cdd:COG3096 517 LRAQLAEL-EQRLRQQQNAERLLEEFCQRIgqqldaAEELEELLAELEAQLEELEE---QAAEAVEQRSELRQQ------ 586
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 910 emitkhdadikgfkqnlldaEEALKAAQKkndELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLA 989
Cdd:COG3096 587 --------------------LEQLRARIK---ELAARAPAWLAAQDALERLREQSGEALADSQEVTAAMQQLLEREREAT 643
|
410
....*....|....*.
gi 2024359640 990 QERNTLKLEKESLLSQ 1005
Cdd:COG3096 644 VERDELAARKQALESQ 659
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
695-1179 |
6.20e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.37 E-value: 6.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 695 EKEQTLENLKAKLESVED-----QHLVEMEDTLNKLQEAEIKKEKFTSAVDGAEnAQRAMQETINKLnQKEEQFALMSSE 769
Cdd:COG4913 219 EEPDTFEAADALVEHFDDlerahEALEDAREQIELLEPIRELAERYAAARERLA-ELEYLRAALRLW-FAQRRLELLEAE 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 770 LEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEimkSSGDSSAQLMKmndELRLKERQLEQIQLELTKANEKAVQ 849
Cdd:COG4913 297 LEELRAELARLEAELERLEARLDALREELDELEAQIRG---NGGDRLEQLER---EIERLERELEERERRRARLEALLAA 370
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 850 LQKNVEQTAQ--KAEQSQ-QETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAkyeketsemitkhdaDIKGFKQN- 925
Cdd:COG4913 371 LGLPLPASAEefAALRAEaAALLEALEEELEALEEALAEAEAALRDLRRELRELEA---------------EIASLERRk 435
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 926 ------LLDAEEALKAA-QKKNDELETQAEELKKQAEQAK--------------SL---SSVLASARKEIE-------LM 974
Cdd:COG4913 436 sniparLLALRDALAEAlGLDEAELPFVGELIEVRPEEERwrgaiervlggfalTLlvpPEHYAAALRWVNrlhlrgrLV 515
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 975 SDKMRDLISEKETLAQERNTL--KLE-KESLLSQHLEME--SKILLVQQDREE--------------------LWTKNEE 1029
Cdd:COG4913 516 YERVRTGLPDPERPRLDPDSLagKLDfKPHPFRAWLEAElgRRFDYVCVDSPEelrrhpraitragqvkgngtRHEKDDR 595
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1030 ----------LNSENKKILKQKEAAEAKSR-QESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLL---Q 1095
Cdd:COG4913 596 rrirsryvlgFDNRAKLAALEAELAELEEElAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAEREIAeleA 675
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1096 QLKELQANKDAVDVAcqkhikeREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQE 1175
Cdd:COG4913 676 ELERLDASSDDLAAL-------EEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELR 748
|
....
gi 2024359640 1176 KDLD 1179
Cdd:COG4913 749 ALLE 752
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1718-1916 |
6.31e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 47.45 E-value: 6.31e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1718 EADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELK 1797
Cdd:COG4942 24 EAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELEAQK 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1798 KEFEALkLAAAQKSQQ----------------------LAALQEENVKLAEELGRSRDEVTS-HQKLEEERSVLNNQLLE 1854
Cdd:COG4942 104 EELAEL-LRALYRLGRqpplalllspedfldavrrlqyLKYLAPARREQAEELRADLAELAAlRAELEAERAELEALLAE 182
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024359640 1855 MKKSLpsntLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAK 1916
Cdd:COG4942 183 LEEER----AALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAA 240
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1466-1999 |
6.32e-05 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 48.09 E-value: 6.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1466 FNTCSSDIEILNRERTELQDKCQKLTGEVENMKENLTVEKKARILDKESFLLERMELQNnigfLEKEVEEMREKNKEFLT 1545
Cdd:TIGR04523 70 INNSNNKIKILEQQIKDLNDKLKKNKDKINKLNSDLSKINSEIKNDKEQKNKLEVELNK----LEKQKKENKKNIDKFLT 145
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1546 EKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHScvsvMLDELQHKYEVTEKEKM 1625
Cdd:TIGR04523 146 EIKKKEKELEKLNNKYNDLKKQKEELENELNLLEKEKLNIQKNIDKIKNKLLKLELLLS----NLKKKIQKNKSLESQIS 221
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1626 ELVQENESLHAEWKSLviiNEEILKEKEKLSKEYYKL------HEKVVALLEQTDADfscrLLVSEGKHELLLEEMSNLA 1699
Cdd:TIGR04523 222 ELKKQNNQLKDNIEKK---QQEINEKTTEISNTQTQLnqlkdeQNKIKKQLSEKQKE----LEQNNKKIKELEKQLNQLK 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1700 LKLREIERLQAQTFMQKF--EADKRAEEVLQTMEKVTKEKDAIHQ--EKIETL-ASLENSRQTNEKLQNELDMlKQNNLK 1774
Cdd:TIGR04523 295 SEISDLNNQKEQDWNKELksELKNQEKKLEEIQNQISQNNKIISQlnEQISQLkKELTNSESENSEKQRELEE-KQNEIE 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1775 --NEEELTKSKELLNLENKKvEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQK----LEEERSVL 1848
Cdd:TIGR04523 374 klKKENQSYKQEIKNLESQI-NDLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSeikdLTNQDSVK 452
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1849 NNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKsisdTSALITQKDEELEKLRNEITVLRGEnasaktlqsvVKTLESD 1928
Cdd:TIGR04523 453 ELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQ----KQKELKSKEKELKKLNEEKKELEEK----------VKDLTKK 518
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024359640 1929 KLKLEEKVKNLEQKLKAKSEQPLTVTSPSGDIAANLLQD---ESAEDKQQEIDFLNSVIVDLQRRNEELNLKIQ 1999
Cdd:TIGR04523 519 ISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKEnleKEIDEKNKEIEELKQTQKSLKKKQEEKQELID 592
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
554-710 |
6.44e-05 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 48.10 E-value: 6.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 554 KEHQREMSSLKEKFE---SSEEALRKEIKTLSASNERM---GKENESLKTKLDHANKENSDVIELWK------SKLESAI 621
Cdd:pfam05667 331 QQREEELEELQEQLEdleSSIQELEKEIKKLESSIKQVeeeLEELKEQNEELEKQYKVKKKTLDLLPdaeeniAKLQALV 410
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 622 ASHQQAMEELKVSFNKGVGAQTAEFAELKTQmekvkldyenemsnlKLKQENEKSQHLKEIEALKAKLLEVTEE---KEQ 698
Cdd:pfam05667 411 DASAQRLVELAGQWEKHRVPLIEEYRALKEA---------------KSNKEDESQRKLEEIKELREKIKEVAEEakqKEE 475
|
170
....*....|..
gi 2024359640 699 TLENLKAKLESV 710
Cdd:pfam05667 476 LYKQLVAEYERL 487
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
781-972 |
6.51e-05 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.52 E-value: 6.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 781 ETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQK 860
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 861 AEQSQQ--------------ETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMitkhdadikgfKQNL 926
Cdd:COG3883 95 LYRSGGsvsyldvllgsesfSDFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAEL-----------EALK 163
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 2024359640 927 LDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIE 972
Cdd:COG3883 164 AELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAE 209
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
336-1005 |
6.54e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 48.43 E-value: 6.54e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 336 LLTETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLR 415
Cdd:pfam02463 304 KLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLES 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 416 AMVEAADREKVELLNQLEEEKRKVEDLQF---------RVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQR 486
Cdd:pfam02463 384 ERLSSAAKLKEEELELKSEEEKEAQLLLElarqledllKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKD 463
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 487 ELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRLESSKHIDDVDTSLSLLQEISSLQEKMAAAGKEHQREM------ 560
Cdd:pfam02463 464 ELELKKSEDLLKETQLVKLQEQLELLLSRQKLEERSQKESKARSGLKVLLALIKDGVGGRIISAHGRLGDLGVAvenykv 543
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 561 ---------SSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELWKSKLESAIASHQQAMEEL 631
Cdd:pfam02463 544 aistaviveVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAK 623
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 632 KVSFNKGVGAQTAEFAELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVE 711
Cdd:pfam02463 624 VVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKK 703
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 712 DQHLVEMEDTLNKLQEAEIKKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVME---------- 781
Cdd:pfam02463 704 KEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELSLKEkelaeerekt 783
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 782 ----------TKLKEREEREqqltEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQ 851
Cdd:pfam02463 784 eklkveeekeEKLKAQEEEL----RALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERL 859
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 852 KNV----EQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLL 927
Cdd:pfam02463 860 EEEitkeELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIEERIKEEAEILLKYEEEPEE 939
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359640 928 DAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQ 1005
Cdd:pfam02463 940 LLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERLEEEKKKLIRAIIEETCQ 1017
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
928-1288 |
6.81e-05 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 47.97 E-value: 6.81e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 928 DAEEALKAAQKKNDELETQAEELKKQAEQAKSlssVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHL 1007
Cdd:pfam07888 56 QREKEKERYKRDREQWERQRRELESRVAELKE---ELRQSREKHEELEEKYKELSASSEELSEEKDALLAQRAAHEARIR 132
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1008 EMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALR 1087
Cdd:pfam07888 133 ELEEDIKTLTQRVLERETELERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEELRSLSKEFQELRNSLAQRDTQVLQLQ 212
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1088 SSESTLLQQLKELQANKDAVDVACqkhikerEELEHYQKLLEENDRVIKDKDDVIQRLQSSYDdlaRNQRELLQevsilt 1167
Cdd:pfam07888 213 DTITTLTQKLTTAHRKEAENEALL-------EELRSLQERLNASERKVEGLGEELSSMAAQRD---RTQAELHQ------ 276
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1168 aERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQS----EKEMLLKSREELcvslantanenqalkLRKDEMQTELETE 1243
Cdd:pfam07888 277 -ARLQAAQLTLQLADASLALREGRARWAQERETLQQsaeaDKDRIEKLSAEL---------------QRLEERLQEERME 340
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 2024359640 1244 REKLE-KMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQE 1288
Cdd:pfam07888 341 REKLEvELGREKDCNRVQLSESRRELQELKASLRVAQKEKEQLQAE 386
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
750-972 |
8.06e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 47.99 E-value: 8.06e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 750 QETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQL---------------TEAKV-KLENDIAEIMKSSG 813
Cdd:COG4913 606 FDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALqrlaeyswdeidvasAEREIaELEAELERLDASSD 685
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 814 DssaqLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQ-------QETLKTHQEELKKMQDQLT-- 884
Cdd:COG4913 686 D----LAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQdrleaaeDLARLELRALLEERFAAALgd 761
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 885 ----DMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQ---------AEELK 951
Cdd:COG4913 762 averELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDADLESLPEYLALLDRLEEDglpeyeerfKELLN 841
|
250 260
....*....|....*....|..
gi 2024359640 952 KQAEQAKS-LSSVLASARKEIE 972
Cdd:COG4913 842 ENSIEFVAdLLSKLRRAIREIK 863
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
772-1442 |
8.99e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 47.79 E-value: 8.99e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 772 QLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAE---IMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAV 848
Cdd:pfam05483 107 KLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQEnkdLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYM 186
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 849 QLQKNVEQTAQKAEQSQQETLKTHQEelkkMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLD 928
Cdd:pfam05483 187 DLNNNIEKMILAFEELRVQAENARLE----MHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFL 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 929 AEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLE 1008
Cdd:pfam05483 263 LEESRDKANQLEEKTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNK 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1009 MESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRS 1088
Cdd:pfam05483 343 AKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNNKEVELEELKKILAEDEKLLD 422
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1089 SESTLLQQLKELQANKDAVDVACQKHIKEREELE-----------HYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQR 1157
Cdd:pfam05483 423 EKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEiqltaiktseeHYLKEVEDLKTELEKEKLKNIELTAHCDKLLLENK 502
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1158 ELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSE----KEMLLKSREELCVSLANTANENQALKLRK 1233
Cdd:pfam05483 503 ELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDElesvREEFIQKGDEVKCKLDKSEENARSIEYEV 582
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1234 DEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSE------KIHLLQEALFASEQRLlaerEELVNE 1307
Cdd:pfam05483 583 LKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAENKQlnayeiKVNKLELELASAKQKF----EEIIDN 658
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1308 NKAVTEkLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREKDelERKYSELLDEKKSLENAFSDMKR 1387
Cdd:pfam05483 659 YQKEIE-DKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVALMEKH--KHQYDKIIEERDSELGLYKNKEQ 735
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....*
gi 2024359640 1388 EQEldfSAKRLLVQENTTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQ 1442
Cdd:pfam05483 736 EQS---SAKAALEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKENTAILKDKK 787
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1016-1446 |
9.38e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.45 E-value: 9.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1016 VQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSES--TL 1093
Cdd:COG4717 51 LEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQllPL 130
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1094 LQQLKELQANKDAVDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQ-RELLQEVSILTAERDS 1172
Cdd:COG4717 131 YQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLSLATEEElQDLAEELEELQQRLAE 210
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1173 AQEKDLDLKSTHIALKNEIDCLLQTNRSLQ-----SEKEMLLKSREELCVSLANTAN----------------------- 1224
Cdd:COG4717 211 LEEELEEAQEELEELEEELEQLENELEAAAleerlKEARLLLLIAAALLALLGLGGSllsliltiagvlflvlgllallf 290
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1225 ---ENQALKLRKDEMQTELETEREKLEK------MTKDNMDLKASLSSLSNFLEEMKSSREAsNSEKIHLLQEALfasEQ 1295
Cdd:COG4717 291 lllAREKASLGKEAEELQALPALEELEEeeleelLAALGLPPDLSPEELLELLDRIEELQEL-LREAEELEEELQ---LE 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1296 RLLAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQF-EKHNEALLREK--------DELER 1366
Cdd:COG4717 367 ELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELlEALDEEELEEEleeleeelEELEE 446
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1367 KYSELLDEKKSLENAFSDMKREQELDfsakrllvqentTLKYSIEALEEELKKKNLENQELIACRSDLSDLLKEAQDARR 1446
Cdd:COG4717 447 ELEELREELAELEAELEQLEEDGELA------------ELLQELEELKAELRELAEEWAALKLALELLEEAREEYREERL 514
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
739-1102 |
1.01e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 47.64 E-value: 1.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 739 VDGAENAQRAMQETINKLNQKEEQFALMSSELEQLksnltvmetklkerEEREQQLTEakvklENDIAeimkssgdsSAQ 818
Cdd:COG3096 284 SERALELRRELFGARRQLAEEQYRLVEMARELEEL--------------SARESDLEQ-----DYQAA---------SDH 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 819 LMKMNDELRLKERqLEQIQLELTKANEKAVQLQKNVEQtAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQN--- 895
Cdd:COG3096 336 LNLVQTALRQQEK-IERYQEDLEELTERLEEQEEVVEE-AAEQLAEAEARLEAAEEEVDSLKSQLADYQQALDVQQTrai 413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 896 QYKD-LQAKYEKE--------TSEMITKHDADIK-----------GFKQNLLDA-------EEALKAAQKKNDELET--- 945
Cdd:COG3096 414 QYQQaVQALEKARalcglpdlTPENAEDYLAAFRakeqqateevlELEQKLSVAdaarrqfEKAYELVCKIAGEVERsqa 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 946 ---------QAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDL----------ISEKETLAQERNTLKLEKESLLSQH 1006
Cdd:COG3096 494 wqtarellrRYRSQQALAQRLQQLRAQLAELEQRLRQQQNAERLLeefcqrigqqLDAAEELEELLAELEAQLEELEEQA 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1007 LEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEaKSRQESTEKVAlisEKSKLLSEIETAQADLLKITQENDAL 1086
Cdd:COG3096 574 AEAVEQRSELRQQLEQLRARIKELAARAPAWLAAQDALE-RLREQSGEALA---DSQEVTAAMQQLLEREREATVERDEL 649
|
410
....*....|....*.
gi 2024359640 1087 RSSESTLLQQLKELQA 1102
Cdd:COG3096 650 AARKQALESQIERLSQ 665
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
875-1110 |
1.04e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 47.13 E-value: 1.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 875 ELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEmitkhdadikgfkqnLLDAEEALKAAQKKNDELETQAEELKKQA 954
Cdd:COG3883 17 QIQAKQKELSELQAELEAAQAELDALQAELEELNEE---------------YNELQAELEALQAEIDKLQAEIAEAEAEI 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 955 EQAKS-LSSVLASARK--------EIELMSDKMRDLISEKETLAQerntlklekesllsqhlemeskilLVQQDREELwt 1025
Cdd:COG3883 82 EERREeLGERARALYRsggsvsylDVLLGSESFSDFLDRLSALSK------------------------IADADADLL-- 135
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1026 knEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANKD 1105
Cdd:COG3883 136 --EELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAA 213
|
....*
gi 2024359640 1106 AVDVA 1110
Cdd:COG3883 214 AAAAA 218
|
|
| PRK10246 |
PRK10246 |
exonuclease subunit SbcC; Provisional |
741-995 |
1.10e-04 |
|
exonuclease subunit SbcC; Provisional
Pssm-ID: 182330 [Multi-domain] Cd Length: 1047 Bit Score: 47.49 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 741 GAENAQRAMQETINKLNQ---KEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSA 817
Cdd:PRK10246 333 HAAKQSAELQAQQQSLNTwlaEHDRFRQWNNELAGWRAQFSQQTSDREQLRQWQQQLTHAEQKLNALPAITLTLTADEVA 412
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 818 QLMkmndELRLKERQLEQiqlELTKANEKAVQLQKNVEQTaqkaeqsqQETLKTHQEELKKMQDQLTDMKKQMETSQNQY 897
Cdd:PRK10246 413 AAL----AQHAEQRPLRQ---RLVALHGQIVPQQKRLAQL--------QVAIQNVTQEQTQRNAALNEMRQRYKEKTQQL 477
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 898 KDLQAKYEKEtsEMItkhdADIKGFKQNL----------------LDAEEALK--AAQKKNDELEtqaEELKKQAEQAKS 959
Cdd:PRK10246 478 ADVKTICEQE--ARI----KDLEAQRAQLqagqpcplcgstshpaVEAYQALEpgVNQSRLDALE---KEVKKLGEEGAA 548
|
250 260 270
....*....|....*....|....*....|....*.
gi 2024359640 960 LSSVLASARKEIELMSDKMRDLISEKETLAQERNTL 995
Cdd:PRK10246 549 LRGQLDALTKQLQRDESEAQSLRQEEQALTQQWQAV 584
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
347-961 |
1.10e-04 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 47.74 E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 347 KISGTTALQEALKEKQQHIEQLLAERDLER---AEVAKATSHVGEIEQE---LALVRD-----GHDRHVLEMEaKMDQLR 415
Cdd:TIGR01612 1157 DVADKAISNDDPEEIEKKIENIVTKIDKKKniyDEIKKLLNEIAEIEKDktsLEEVKGinlsyGKNLGKLFLE-KIDEEK 1235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 416 AMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRvaT 495
Cdd:TIGR01612 1236 KKSEHMIKAMEAYIEDLDEIKEKSPEIENEMGIEMDIKAEMETFNISHDDDKDHHIISKKHDENISDIREKSLKIIE--D 1313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 496 VSEKSRIMELERDLALRVkevaelrgrLESSKHIDDVDTSLS---------LLQEISSLQEKMAAAGKEHQREMSSLKEK 566
Cdd:TIGR01612 1314 FSEESDINDIKKELQKNL---------LDAQKHNSDINLYLNeianiynilKLNKIKKIIDEVKEYTKEIEENNKNIKDE 1384
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 567 FESSEEALRKE-------------------------IKTLSASNERMGKENESLKTKLDHANKENSDVIELW-------- 613
Cdd:TIGR01612 1385 LDKSEKLIKKIkddinleeckskiestlddkdidecIKKIKELKNHILSEESNIDTYFKNADENNENVLLLFkniemadn 1464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 614 ------KSKLESAIASHQQAMEELKVSFNKGVGAQTaEFAELKTQMEKVKLDYE----------NEMSNLKLKQ-----E 672
Cdd:TIGR01612 1465 ksqhilKIKKDNATNDHDFNINELKEHIDKSKGCKD-EADKNAKAIEKNKELFEqykkdvtellNKYSALAIKNkfaktK 1543
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 673 NEKSQHLKEIEALKAKLLEVTEEKEQTLEnlkaklesvedqhlvemedtlnklqeaEIKKEKFTSAVDGAENaqramqet 752
Cdd:TIGR01612 1544 KDSEIIIKEIKDAHKKFILEAEKSEQKIK---------------------------EIKKEKFRIEDDAAKN-------- 1588
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 753 iNKLNQKEEQFALMSSELEQLKSNLTVMETK----LKEREEREQQLTEAKVKLENdiaEIMKSSGDSSAQLMKMNDELRL 828
Cdd:TIGR01612 1589 -DKSNKAAIDIQLSLENFENKFLKISDIKKKindcLKETESIEKKISSFSIDSQD---TELKENGDNLNSLQEFLESLKD 1664
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 829 KERQLEQIQLELTKANEKAVQLQKNVEQTAQKAE----QSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQyKDLQA-- 902
Cdd:TIGR01612 1665 QKKNIEDKKKELDELDSEIEKIEIDVDQHKKNYEigiiEKIKEIAIANKEEIESIKELIEPTIENLISSFNT-NDLEGid 1743
|
650 660 670 680 690 700
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359640 903 ---KYEKETSEMITKHDADIKGFK--QNLLD--AEEALKAAQKKNDELETQAEELKKQAEQAKSLS 961
Cdd:TIGR01612 1744 pneKLEEYNTEIGDIYEEFIELYNiiAGCLEtvSKEPITYDEIKNTRINAQNEFLKIIEIEKKSKS 1809
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
1410-1946 |
1.24e-04 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 47.20 E-value: 1.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1410 IEALEEELKKKNLE----NQELIACRSDLSDLLKEAQDarrtLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQD 1485
Cdd:PRK01156 185 IDYLEEKLKSSNLEleniKKQIADDEKSHSITLKEIER----LSIEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKT 260
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1486 KCQKLTGEVENMKENLTVEKkarildkesfllERMELQNNigflekEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVI 1565
Cdd:PRK01156 261 AESDLSMELEKNNYYKELEE------------RHMKIIND------PVYKNRNYINDYFKYKNDIENKKQILSNIDAEIN 322
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1566 KEKMILYK--ETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLHAEWKSLVI 1643
Cdd:PRK01156 323 KYHAIIKKlsVLQKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEI 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1644 INEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSCRLLVSEGKHEL------------LLEEMSNLALKL--REIERLQ 1709
Cdd:PRK01156 403 DPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLngqsvcpvcgttLGEEKSNHIINHynEKKSRLE 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1710 AQTFMQKFEADKRAEEVLQtmekVTKEKDAIHQEKIETLAS----LENSRQTNEKLQNELDMLKQNNLKNEE--ELTKSK 1783
Cdd:PRK01156 483 EKIREIEIEVKDIDEKIVD----LKKRKEYLESEEINKSINeynkIESARADLEDIKIKINELKDKHDKYEEikNRYKSL 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1784 ELLNLENKKVEELKK-------EFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSH-QKLEEERSVLNNQLLEM 1855
Cdd:PRK01156 559 KLEDLDSKRTSWLNAlavisliDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSiREIENEANNLNNKYNEI 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1856 K-KSLPSNTLREST--LKKEIdEERASLQKSISDTSALITQKDEELEKLRNEitvLRGENASAKTLQSVVKTLESDKLKL 1932
Cdd:PRK01156 639 QeNKILIEKLRGKIdnYKKQI-AEIDSIIPDLKEITSRINDIEDNLKKSRKA---LDDAKANRARLESTIEILRTRINEL 714
|
570
....*....|....
gi 2024359640 1933 EEKVKNLEQKLKAK 1946
Cdd:PRK01156 715 SDRINDINETLESM 728
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
338-958 |
1.28e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 47.53 E-value: 1.28e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 338 TETSSRYARKISGTTALQEALKEKQQHIEQLLAERDLE----RAEVAKATSHVGEIE-QELALVRDGHDRHVLEMEaKMD 412
Cdd:pfam12128 272 TLIASRQEERQETSAELNQLLRTLDDQWKEKRDELNGElsaaDAAVAKDRSELEALEdQHGAFLDADIETAAADQE-QLP 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 413 QLRAMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITK--GDLETQTKLEHARIKELEQsllfEKTKADKLQRELED 490
Cdd:pfam12128 351 SWQSELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDiaGIKDKLAKIREARDRQLAV----AEDDLQALESELRE 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 491 TRVAtvsEKSRIMELERDLALRVkevAELRGRLESSKHIDDVDTSLSLLQE-ISSLQEKMAAAGKEH---QREMSSLKEK 566
Cdd:pfam12128 427 QLEA---GKLEFNEEEYRLKSRL---GELKLRLNQATATPELLLQLENFDErIERAREEQEAANAEVerlQSELRQARKR 500
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 567 FESSEEALRKEIKTLSASNERMGKENESL----KTKLDHANKENSDvielWKSKLESAIASHQQAMEELKVSFNKGVGAQ 642
Cdd:pfam12128 501 RDQASEALRQASRRLEERQSALDELELQLfpqaGTLLHFLRKEAPD----WEQSIGKVISPELLHRTDLDPEVWDGSVGG 576
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 643 TAEF-------------------AELKTQMEKVKLDYENEMSNLKlKQENEKSQHLKEIEALKAKLlevtEEKEQTLENL 703
Cdd:pfam12128 577 ELNLygvkldlkridvpewaaseEELRERLDKAEEALQSAREKQA-AAEEQLVQANGELEKASREE----TFARTALKNA 651
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 704 KAKLESVEDQHLVEMEDTLNKLQEAEIKKEKFTSAVDGAENA----QRAMQETINKlnQKEEQFALMSSELEQLKSNLTV 779
Cdd:pfam12128 652 RLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQldkkHQAWLEEQKE--QKREARTEKQAYWQVVEGALDA 729
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 780 METKLKEREEREQQLTEAKVK-LENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTA 858
Cdd:pfam12128 730 QLALLKAAIAARRSGAKAELKaLETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQEVLRYFDWYQETWLQRR 809
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 859 QKAeQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDA--EEALKAA 936
Cdd:pfam12128 810 PRL-ATQLSNIERAISELQQQLARLIADTKLRRAKLEMERKASEKQQVRLSENLRGLRCEMSKLATLKEDAnsEQAQGSI 888
|
650 660
....*....|....*....|..
gi 2024359640 937 QKKNDELETQAEELKKQAEQAK 958
Cdd:pfam12128 889 GERLAQLEDLKLKRDYLSESVK 910
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1739-1949 |
1.30e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.68 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1739 AIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQ 1818
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1819 EENVKLAEELGRSRDEVTSHQKLEEERSVLNNQllemkksLPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEEL 1898
Cdd:COG4942 97 AELEAQKEELAELLRALYRLGRQPPLALLLSPE-------DFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAEL 169
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2024359640 1899 EKLRNEITVLRGENASAKtlqsvvKTLESDKLKLEEKVKNLEQKLKAKSEQ 1949
Cdd:COG4942 170 EAERAELEALLAELEEER------AALEALKAERQKLLARLEKELAELAAE 214
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
539-972 |
1.34e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.07 E-value: 1.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 539 LQEISSLQEKMAAAGKEHQ--REMSSLKEKFESSEEALRKEIKTLSASNERMGK--ENESLKTKLDHANKENSDVIELWK 614
Cdd:COG4717 70 LKELKELEEELKEAEEKEEeyAELQEELEELEEELEELEAELEELREELEKLEKllQLLPLYQELEALEAELAELPERLE 149
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 615 sKLESAIASHQQAMEELKvsfnkgvgAQTAEFAELKTQMEkvklDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTE 694
Cdd:COG4717 150 -ELEERLEELRELEEELE--------ELEAELAELQEELE----ELLEQLSLATEEELQDLAEELEELQQRLAELEEELE 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 695 EKEQTLENLKAKLESVEDQHlvEMEDTLNKLQEAEIKKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLK 774
Cdd:COG4717 217 EAQEELEELEEELEQLENEL--EAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLA 294
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 775 SNLTVMETKLKE-----------REEREQQLTEAKVKLENDIAEIMKSSgDSSAQLMKMNDELRLKERQLEQIQLELTKA 843
Cdd:COG4717 295 REKASLGKEAEElqalpaleeleEEELEELLAALGLPPDLSPEELLELL-DRIEELQELLREAEELEEELQLEELEQEIA 373
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 844 NEKAVQLQKNVEQTAQKAEQSQQetLKTHQEELKKMQDQLTDMKKQMET--SQNQYKDLQAKYE------KETSEMITKH 915
Cdd:COG4717 374 ALLAEAGVEDEEELRAALEQAEE--YQELKEELEELEEQLEELLGELEEllEALDEEELEEELEeleeelEELEEELEEL 451
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 916 DADIKGFKQNLLDAEEALKAAQKKnDELETQAEELKKQAEQAKSL---SSVLASARKEIE 972
Cdd:COG4717 452 REELAELEAELEQLEEDGELAELL-QELEELKAELRELAEEWAALklaLELLEEAREEYR 510
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
1355-1905 |
1.37e-04 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 47.24 E-value: 1.37e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1355 EALLREKDELERKYSELLDEKKSLENAFSDMKRE-QELDFSAKRLLVQENTTLKySIEALEEELKKKNLENQELIACRSD 1433
Cdd:COG1196 242 EELEAELEELEAELEELEAELAELEAELEELRLElEELELELEEAQAEEYELLA-ELARLEQDIARLEERRRELEERLEE 320
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1434 LSDLLKEAQDARRTLENELAAVShakqvlsssfntcssdiEILNRERTELQDKCQKLTgEVENMKENLTVEKKARILDKE 1513
Cdd:COG1196 321 LEEELAELEEELEELEEELEELE-----------------EELEEAEEELEEAEAELA-EAEEALLEAEAELAEAEEELE 382
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1514 SFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLS 1593
Cdd:COG1196 383 ELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALL 462
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1594 VSKAELEDVHSCVSVMLDELQHKYEvtEKEKMELVQENESLHAEWKSLVIINEEILKEKEKLSKEYYKLH--EKVVALLE 1671
Cdd:COG1196 463 ELLAELLEEAALLEAALAELLEELA--EAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAVLIgvEAAYEAAL 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1672 QTDADFSCRLLVSEGKHELLLEEMSNLALKLREIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETL--A 1749
Cdd:COG1196 541 EAALAAALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVlgD 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1750 SLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELG 1829
Cdd:COG1196 621 TLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALL 700
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359640 1830 RSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEI 1905
Cdd:COG1196 701 AEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
377-1471 |
1.39e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 47.09 E-value: 1.39e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 377 AEVAKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVE---AADREKVELLNQLEEEKRKVEDLQFRVEEESITK 453
Cdd:pfam01576 12 EELQKVKERQQKAESELKELEKKHQQLCEEKNALQEQLQAETElcaEAEEMRARLAARKQELEEILHELESRLEEEEERS 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 454 GDLETQTKLEHARIKELEQSLLFEKTKADKLQREledtrvaTVSEKSRIMELERDLALrvkeVAELRGRLESSKhiddvd 533
Cdd:pfam01576 92 QQLQNEKKKMQQHIQDLEEQLDEEEAARQKLQLE-------KVTTEAKIKKLEEDILL----LEDQNSKLSKER------ 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 534 tslSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESS----EEALRKEiktlsasnERMGKENESLKTKLDHANKENSDV 609
Cdd:pfam01576 155 ---KLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAMisdlEERLKKE--------EKGRQELEKAKRKLEGESTDLQEQ 223
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 610 IELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAefaelKTQMEKVKLDYENEMSNLKLKQENEKSQHLKeIEALKAKL 689
Cdd:pfam01576 224 IAELQAQIAELRAQLAKKEEELQAALARLEEETAQ-----KNNALKKIRELEAQISELQEDLESERAARNK-AEKQRRDL 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 690 LEvteekeqTLENLKAKLEsvedqhlvEMEDTLNKLQEAEIKKEKFTSAVDGA-ENAQRAMQETINKLNQKEEQ-FALMS 767
Cdd:pfam01576 298 GE-------ELEALKTELE--------DTLDTTAAQQELRSKREQEVTELKKAlEEETRSHEAQLQEMRQKHTQaLEELT 362
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 768 SELEQLKSNLTVMEtklkereEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKA 847
Cdd:pfam01576 363 EQLEQAKRNKANLE-------KAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKL 435
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 848 VQLQKNVEQTAQKAEQSQQETLKTHQEeLKKMQDQLTDMKKQMETSQNQYKDLQAKyeketsemITKHDADIKGFKQNLL 927
Cdd:pfam01576 436 SKLQSELESVSSLLNEAEGKNIKLSKD-VSSLESQLQDTQELLQEETRQKLNLSTR--------LRQLEDERNSLQEQLE 506
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 928 DAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARK----EIELMSDKMRDLISEKETLAQERNTLKLEKESLL 1003
Cdd:pfam01576 507 EEEEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEALEEGKKrlqrELEALTQQLEEKAAAYDKLEKTKNRLQQELDDLL 586
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1004 SQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQEN 1083
Cdd:pfam01576 587 VDLDHQRQLVSNLEKKQKKFDQMLAEEKAISARYAEERDRAEAEAREKETRALSLARALEEALEAKEELERTNKQLRAEM 666
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1084 DALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELEHYQKL-------LEENDRVIKDKDDviQRLQSSYDDLARNQ 1156
Cdd:pfam01576 667 EDLVSSKDDVGKNVHELERSKRALEQQVEEMKTQLEELEDELQAtedaklrLEVNMQALKAQFE--RDLQARDEQGEEKR 744
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1157 RELLQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEM 1236
Cdd:pfam01576 745 RQLVKQVRELEAELEDERKQRAQAVAAKKKLELDLKELEAQIDAANKGREEAVKQLKKLQAQMKDLQRELEEARASRDEI 824
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1237 QTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSRE------ASNSEKIHLLQEA---LFASEQRLLAEREELVNE 1307
Cdd:pfam01576 825 LAQSKESEKKLKNLEAELLQLQEDLAASERARRQAQQERDeladeiASGASGKSALQDEkrrLEARIAQLEEELEEEQSN 904
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1308 NKAVTEKLTKATadavlaetaftEKINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKS---------- 1377
Cdd:pfam01576 905 TELLNDRLRKST-----------LQVEQLTTELAAERSTSQKSESARQQLERQNKELKAKLQEMEGTVKSkfkssiaale 973
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1378 --LENAFSDMKREQELDFSAKRLLVQENTTLKYSIEALEEE----------LKKKNLENQELIACRSDLSDLLKEAQDAR 1445
Cdd:pfam01576 974 akIAQLEEQLEQESRERQAANKLVRRTEKKLKEVLLQVEDErrhadqykdqAEKGNSRMKQLKRQLEEAEEEASRANAAR 1053
|
1130 1140
....*....|....*....|....*.
gi 2024359640 1446 RTLENELAAVSHAKQVLSSSFNTCSS 1471
Cdd:pfam01576 1054 RKLQRELDDATESNESMNREVSTLKS 1079
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
538-1104 |
1.40e-04 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 47.12 E-value: 1.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 538 LLQEISSLQEKMAAAGKEHQREMSSLkEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVielwkskl 617
Cdd:pfam10174 252 LEDEVQMLKTNGLLHTEDREEEIKQM-EVYKSHSKFMKNKIDQLKQELSKKESELLALQTKLETLTNQNSDC-------- 322
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 618 esaiashQQAMEELKVSFNkgvgAQTAEFAELKTQMEKVKLDYENEMSNLKLKQE------NEKSQHLKEIEALKAKLle 691
Cdd:pfam10174 323 -------KQHIEVLKESLT----AKEQRAAILQTEVDALRLRLEEKESFLNKKTKqlqdltEEKSTLAGEIRDLKDML-- 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 692 vtEEKEQTLENLKAKLESVEDQhLVEMEDTLNKLQEAEIKKEKFTSAVDGA----ENAQRAMQETINKL-NQKEEQFALM 766
Cdd:pfam10174 390 --DVKERKINVLQKKIENLQEQ-LRDKDKQLAGLKERVKSLQTDSSNTDTAlttlEEALSEKERIIERLkEQREREDRER 466
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 767 SSELEQLKSNLTVMETKL----KEREEREQQLTEAKVKLENDIAEIMKSSgdssAQLMKMNDELRLKERQLEQIQLELTK 842
Cdd:pfam10174 467 LEELESLKKENKDLKEKVsalqPELTEKESSLIDLKEHASSLASSGLKKD----SKLKSLEIAVEQKKEECSKLENQLKK 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 843 ANEKAVQLQKNVEqTAQKAEQSQQEtLKTHQEELKKMQ---DQLTDMKKQMETSQNQYKDLQAKYEKETSEMITkhDADI 919
Cdd:pfam10174 543 AHNAEEAVRTNPE-INDRIRLLEQE-VARYKEESGKAQaevERLLGILREVENEKNDKDKKIAELESLTLRQMK--EQNK 618
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 920 KGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAE-QAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLE 998
Cdd:pfam10174 619 KVANIKHGQQEMKKKGAQLLEEARRREDNLADNSQQlQLEELMGALEKTRQELDATKARLSSTQQSLAEKDGHLTNLRAE 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 999 KESLLSQHLEMESKILLvqqdreelwtkneelnsenkkilkqkeaaeaksrqestekvALISEKSKLLSEIETAQADLLK 1078
Cdd:pfam10174 699 RRKQLEEILEMKQEALL-----------------------------------------AAISEKDANIALLELSSSKKKK 737
|
570 580
....*....|....*....|....*.
gi 2024359640 1079 ITQENDALRSSESTLLQQLKELQANK 1104
Cdd:pfam10174 738 TQEEVMALKREKDRLVHQLKQQTQNR 763
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1028-1304 |
1.75e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 46.82 E-value: 1.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1028 EELNSENKKILKQKEAAEAKSRQESTEKVALI--SEKSKLLSEIETAQA--DLLKITQENDALRSSESTLLQQLKELQAN 1103
Cdd:PLN02939 106 EAIAAIDNEQQTNSKDGEQLSDFQLEDLVGMIqnAEKNILLLNQARLQAleDLEKILTEKEALQGKINILEMRLSETDAR 185
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1104 kdaVDVACQKHIKEREELEHYQKLLEEndrvikdkddVIQRLQSSYddlarnqrellQEVSILTAERDSAQEKDLDLKST 1183
Cdd:PLN02939 186 ---IKLAAQEKIHVEILEEQLEKLRNE----------LLIRGATEG-----------LCVHSLSKELDVLKEENMLLKDD 241
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1184 HIALKNEIDCLLQTNRS---LQSEKEMLLKSREEL-CVSLANTANENQALKLRKDEMQTELETEREKLEKMTK------- 1252
Cdd:PLN02939 242 IQFLKAELIEVAETEERvfkLEKERSLLDASLRELeSKFIVAQEDVSKLSPLQYDCWWEKVENLQDLLDRATNqvekaal 321
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|....*
gi 2024359640 1253 ---DNMDLKASLSSLSNFLEEMKSSREASnsEKIHLLQEALFASEQRLLAEREEL 1304
Cdd:PLN02939 322 vldQNQDLRDKVDKLEASLKEANVSKFSS--YKVELLQQKLKLLEERLQASDHEI 374
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1698-1904 |
1.80e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 46.83 E-value: 1.80e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1698 LALKLREIERLQAQtfmqKFEADKRAEEVLQTMEKVTKEKDAIHQekietLASLENSRQTNEKLQNELdmlkqnnlkneE 1777
Cdd:COG4913 612 LAALEAELAELEEE----LAEAEERLEALEAELDALQERREALQR-----LAEYSWDEIDVASAEREI-----------A 671
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1778 ELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEmkk 1857
Cdd:COG4913 672 ELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELR--- 748
|
170 180 190 200
....*....|....*....|....*....|....*....|....*..
gi 2024359640 1858 SLPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNE 1904
Cdd:COG4913 749 ALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEELERAMRA 795
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
355-738 |
1.90e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 46.66 E-value: 1.90e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 355 QEALK-EKQQHIEQLLAERDLERAEVAKAtshvGEIEQELALVRDgHDRHVLEMEAKMDQLRamveaadrekvellnqLE 433
Cdd:pfam17380 298 QERLRqEKEEKAREVERRRKLEEAEKARQ----AEMDRQAAIYAE-QERMAMERERELERIR----------------QE 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 434 EEKRKVEdlqfRVEEESITkgdletqtkLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRimelERDLALRV 513
Cdd:pfam17380 357 ERKRELE----RIRQEEIA---------MEISRMRELERLQMERQQKNERVRQELEAARKVKILEEER----QRKIQQQK 419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 514 KEVAELRGRLESSKhiddvdtslsllqeisslqekmaaagkehQREMSSLKEKFESSEEALRKEIKTLSASNERMGKENE 593
Cdd:pfam17380 420 VEMEQIRAEQEEAR-----------------------------QREVRRLEEERAREMERVRLEEQERQQQVERLRQQEE 470
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 594 SLKTK---LDHANKENSDVIELWKSKLESAIASHQQAMEElkvsfnkgvgaQTAEFAELKTQMEKVKLDYENEMSNLKLK 670
Cdd:pfam17380 471 ERKRKkleLEKEKRDRKRAEEQRRKILEKELEERKQAMIE-----------EERKRKLLEKEMEERQKAIYEEERRREAE 539
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359640 671 QENEKSQHLKEIEALKAKLLEVTEEkeqtlenlKAKLESVEDQhlvemEDTLNKLQEAEIKKEKFTSA 738
Cdd:pfam17380 540 EERRKQQEMEERRRIQEQMRKATEE--------RSRLEAMERE-----REMMRQIVESEKARAEYEAT 594
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
407-590 |
1.98e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 46.55 E-value: 1.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 407 MEAKMDQLRAMVEAADREKVELLNQLEEEKRKVEDlqFRVEEESItkgDLETQTKLEHARIKELEQSLL-------FEKT 479
Cdd:COG3206 166 LELRREEARKALEFLEEQLPELRKELEEAEAALEE--FRQKNGLV---DLSEEAKLLLQQLSELESQLAearaelaEAEA 240
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 480 KADKLQRELEDTR--VATVSEKSRIMELERDLALRVKEVAELRGRLeSSKHIDDVdtslSLLQEISSLQEKMAAAGKEHQ 557
Cdd:COG3206 241 RLAALRAQLGSGPdaLPELLQSPVIQQLRAQLAELEAELAELSARY-TPNHPDVI----ALRAQIAALRAQLQQEAQRIL 315
|
170 180 190
....*....|....*....|....*....|...
gi 2024359640 558 REMSSLKEKFESSEEALRKEIKTLSASNERMGK 590
Cdd:COG3206 316 ASLEAELEALQAREASLQAQLAQLEARLAELPE 348
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
1335-1766 |
2.01e-04 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 46.71 E-value: 2.01e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1335 ELNLEKESVFSKSLQFEK-HNEALLREKDE----LERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYS 1409
Cdd:pfam01576 109 EEQLDEEEAARQKLQLEKvTTEAKIKKLEEdillLEDQNSKLSKERKLLEERISEFTSNLAEEEEKAKSLSKLKNKHEAM 188
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1410 IEALEEELKKKNLENQELIACRSDLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQK 1489
Cdd:pfam01576 189 ISDLEERLKKEEKGRQELEKAKRKLEGESTDLQEQIAELQAQIAELRAQLAKKEEELQAALARLEEETAQKNNALKKIRE 268
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1490 LTGEVENMKENLTVEKKARILDK-------ESFLLERMELQNNIGFL----------EKEVEEMREKNKEFLTEKELLVQ 1552
Cdd:pfam01576 269 LEAQISELQEDLESERAARNKAEkqrrdlgEELEALKTELEDTLDTTaaqqelrskrEQEVTELKKALEEETRSHEAQLQ 348
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1553 EKEKSET--------KLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVMLDELQHKYEVTEKEK 1624
Cdd:pfam01576 349 EMRQKHTqaleelteQLEQAKRNKANLEKAKQALESENAELQAELRTLQQAKQDSEHKRKKLEGQLQELQARLSESERQR 428
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1625 MELVQENESLHAEWKSLVIINEEILKEKEKLSKEY----YKLHEKVVALLEQTDA--DFSCRLLVSEGKHELLLEEMSNL 1698
Cdd:pfam01576 429 AELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVssleSQLQDTQELLQEETRQklNLSTRLRQLEDERNSLQEQLEEE 508
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 2024359640 1699 ALKLREIERLQAQTFMQKFEADKRAEEVLQTME-------KVTKEKDAIHQEKIETLASLENSRQTNEKLQNELD 1766
Cdd:pfam01576 509 EEAKRNVERQLSTLQAQLSDMKKKLEEDAGTLEaleegkkRLQRELEALTQQLEEKAAAYDKLEKTKNRLQQELD 583
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
406-1215 |
2.03e-04 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 46.58 E-value: 2.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 406 EMEAKMDQLRAMVEAADREKVELlNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQ 485
Cdd:TIGR00606 225 QITSKEAQLESSREIVKSYENEL-DPLKNRLKEIEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELKMEKVFQGTDEQL 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 486 RELEDTRVATVSEKSR--------IMELERDLALRVKEVAELRGRLESSKHIDDV--DTSLSLLQEISSLQEKMAAAGKE 555
Cdd:TIGR00606 304 NDLYHNHQRTVREKERelvdcqreLEKLNKERRLLNQEKTELLVEQGRLQLQADRhqEHIRARDSLIQSLATRLELDGFE 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 556 H----QREMSSLKEKFESSEEALRKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELWKSKLESAIASHQQAMEEL 631
Cdd:TIGR00606 384 RgpfsERQIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKEL 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 632 KVSFNKGVGAQTAEFAELKTQMEKVKLDyENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKaklesve 711
Cdd:TIGR00606 464 QQLEGSSDRILELDQELRKAERELSKAE-KNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRT------- 535
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 712 dQHLVEMEDTLNKLQEAEIKKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREERE 791
Cdd:TIGR00606 536 -QMEMLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNEL 614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 792 QQLTEAKVKLENDIAEIMkSSGDSSAQLMKMNDELRLKERQLEQiqleLTKANEKAVQLQKNVEQTAQKAEQSQQETLKT 871
Cdd:TIGR00606 615 ESKEEQLSSYEDKLFDVC-GSQDEESDLERLKEEIEKSSKQRAM----LAGATAVYSQFITQLTDENQSCCPVCQRVFQT 689
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 872 hQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDAdikgfKQNLLD-AEEALKAAQKKNDELETQAEEL 950
Cdd:TIGR00606 690 -EAELQEFISDLQSKLRLAPDKLKSTESELKKKEKRRDEMLGLAPG-----RQSIIDlKEKEIPELRNKLQKVNRDIQRL 763
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 951 KKQAEQAKSLssvLASARKEIELMSDKMRDL-ISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREE------- 1022
Cdd:TIGR00606 764 KNDIEEQETL---LGTIMPEEESAKVCLTDVtIMERFQMELKDVERKIAQQAAKLQGSDLDRTVQQVNQEKQEkqheldt 840
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1023 LWTKNEELNSENKKILKQKEAAEAKSRQESTEKVAL---ISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKE 1099
Cdd:TIGR00606 841 VVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIgtnLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEK 920
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1100 LQANKDavDVACQKHIKEREELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEK--- 1176
Cdd:TIGR00606 921 DQQEKE--ELISSKETSNKKAQDKVNDIKEKVKNIHGYMKDIENKIQDGKDDYLKQKETELNTVNAQLEECEKHQEKine 998
|
810 820 830
....*....|....*....|....*....|....*....
gi 2024359640 1177 DLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREEL 1215
Cdd:TIGR00606 999 DMRLMRQDIDTQKIQERWLQDNLTLRKRENELKEVEEEL 1037
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
357-531 |
2.30e-04 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 46.39 E-value: 2.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 357 ALKEKQQHIEQLLAE---RDLERAEVAKATS-----------HVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEAAD 422
Cdd:COG2433 347 AYKNKFERVEKKVPPdvdRDEVKARVIRGLSieealeeliekELPEEEPEAEREKEHEERELTEEEEEIRRLEEQVERLE 426
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 423 REKVELLNQLEEEKRKVEDLQFRVEEESItkgdletQTKLEHARIKELEQsllfEKTKADKLQRELEDtrvatvsEKSRI 502
Cdd:COG2433 427 AEVEELEAELEEKDERIERLERELSEARS-------EERREIRKDREISR----LDREIERLERELEE-------ERERI 488
|
170 180 190
....*....|....*....|....*....|.
gi 2024359640 503 MELERDLAlRVKEVAEL--RGRLESSKHIDD 531
Cdd:COG2433 489 EELKRKLE-RLKELWKLehSGELVPVKVVEK 518
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
349-603 |
2.98e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 45.53 E-value: 2.98e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 349 SGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELAlvrdghdrhvlEMEAKMDQLRAMVEAADREKVEL 428
Cdd:COG4942 13 LAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLA-----------ALERRIAALARRIRALEQELAAL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 429 LNQLEEEKRKVEDLQFRVEEEsitKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERD 508
Cdd:COG4942 82 EAELAELEKEIAELRAELEAQ---KEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRAD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 509 LAlrvkEVAELRGRLESSKhiddvDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSE---EALRKEIKTLSASN 585
Cdd:COG4942 159 LA----ELAALRAELEAER-----AELEALLAELEEERAALEALKAERQKLLARLEKELAELAaelAELQQEAEELEALI 229
|
250
....*....|....*...
gi 2024359640 586 ERMGKENESLKTKLDHAN 603
Cdd:COG4942 230 ARLEAEAAAAAERTPAAG 247
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
342-852 |
3.06e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 45.83 E-value: 3.06e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 342 SRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVrDGHDRHVLEMEAKMDQLRAMVEAA 421
Cdd:PRK03918 179 ERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKEL-EELKEEIEELEKELESLEGSKRKL 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 422 DREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKAD----------------KLQ 485
Cdd:PRK03918 258 EEKIRELEERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELREIEKRLSRleeeingieerikeleEKE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 486 RELEDTRVATVSEKSRIMELERDLAL--RVKEVAELRGRLESSKHIDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSSL 563
Cdd:PRK03918 338 ERLEELKKKLKELEKRLEELEERHELyeEAKAKKEELERLKKRLTGLTPEKLEKELEELEKAKEEIEEEISKITARIGEL 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 564 KEKFESSEEAL-----------------------------RKEIKTLSASNERMGKENESLKTKLDHANKENSDVIELwk 614
Cdd:PRK03918 418 KKEIKELKKAIeelkkakgkcpvcgrelteehrkelleeyTAELKRIEKELKEIEEKERKLRKELRELEKVLKKESEL-- 495
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 615 SKLESAIASHQQAMEELKVSFNKGVGAQTAEFAELKTQMEKVKLDYENEMSNLKLKQENEKSqhlkeiealKAKLLEVTE 694
Cdd:PRK03918 496 IKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKK---------LAELEKKLD 566
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 695 EKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAEIKKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLK 774
Cdd:PRK03918 567 ELEEELAELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELR 646
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359640 775 SNLTVMETKLKEREEREqqLTEAKVKLENDIAEImkssgdsSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQK 852
Cdd:PRK03918 647 KELEELEKKYSEEEYEE--LREEYLELSRELAGL-------RAELEELEKRREEIKKTLEKLKEELEEREKAKKELEK 715
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
1717-1952 |
3.58e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 45.66 E-value: 3.58e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1717 FEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKEllnlENKKVEEL 1796
Cdd:PLN02939 124 QLSDFQLEDLVGMIQNAEKNILLLNQARLQALEDLEKILTEKEALQGKINILEMRLSETDARIKLAAQ----EKIHVEIL 199
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1797 KKEFEALKLAAAQK-----------SQQLAALQEENVKLAEELGRSRDEVTSHQ-------KLEEERSVLNNQLLEMKKS 1858
Cdd:PLN02939 200 EEQLEKLRNELLIRgateglcvhslSKELDVLKEENMLLKDDIQFLKAELIEVAeteervfKLEKERSLLDASLRELESK 279
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1859 L---PSNTLRESTLKKEIDEERA-SLQ------KSISDTSALITQKDEELEKLRNEItvlrgeNASAKtlQSVVKTLESD 1928
Cdd:PLN02939 280 FivaQEDVSKLSPLQYDCWWEKVeNLQdlldraTNQVEKAALVLDQNQDLRDKVDKL------EASLK--EANVSKFSSY 351
|
250 260
....*....|....*....|....*
gi 2024359640 1929 KLKL-EEKVKNLEQKLKAKSEQPLT 1952
Cdd:PLN02939 352 KVELlQQKLKLLEERLQASDHEIHS 376
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1692-1910 |
3.78e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.68 E-value: 3.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1692 LEEMSNLALKLRE-IERLQaqtfmqkfeadkRAEEVLQTMEKVTKEKDaiHQEKIETLASLENSRQTNEKLQNELDmlkq 1770
Cdd:COG4913 237 LERAHEALEDAREqIELLE------------PIRELAERYAAARERLA--ELEYLRAALRLWFAQRRLELLEAELE---- 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1771 nnlKNEEELTKSKELLNLENKKVEELKKEFEALKLA-AAQKSQQLAALQEENVKLAEELGRSRDEvtsHQKLEEERSVLN 1849
Cdd:COG4913 299 ---ELRAELARLEAELERLEARLDALREELDELEAQiRGNGGDRLEQLEREIERLERELEERERR---RARLEALLAALG 372
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 2024359640 1850 NQLLEMKKSLPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRG 1910
Cdd:COG4913 373 LPLPASAEEFAALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLER 433
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
647-810 |
4.00e-04 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 45.15 E-value: 4.00e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 647 AELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLevteEKEQTLENLKAKLESvEDQHLVEMEDTLNKLQ 726
Cdd:PRK12704 49 KEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLL----QKEENLDRKLELLEK-REEELEKKEKELEQKQ 123
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 727 EaEIKKekftsavdgaenaqraMQETINKLNQKEEQfalmssELEQLkSNLTvmetklkeREE-REQQLTEAKVKLENDI 805
Cdd:PRK12704 124 Q-ELEK----------------KEEELEELIEEQLQ------ELERI-SGLT--------AEEaKEILLEKVEEEARHEA 171
|
....*
gi 2024359640 806 AEIMK 810
Cdd:PRK12704 172 AVLIK 176
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
647-1104 |
4.14e-04 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 45.67 E-value: 4.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 647 AELKTQMEKVKLDYENEMSNLKLKQENEKSQHL--------KEIEALKAKLlevtEEKEQTLENLKAKLESVEDQHLVEM 718
Cdd:PRK11281 39 ADVQAQLDALNKQKLLEAEDKLVQQDLEQTLALldkidrqkEETEQLKQQL----AQAPAKLRQAQAELEALKDDNDEET 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 719 EDTLNKLQEAEIKKekftsavdgaenaqramqetinKLNQKEEQFALMSSELEQLKSNLTVMETklkeREEREQ-QLTEA 797
Cdd:PRK11281 115 RETLSTLSLRQLES----------------------RLAQTLDQLQNAQNDLAEYNSQLVSLQT----QPERAQaALYAN 168
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 798 KVKLEnDIAEIMKSSGDSSAQL-----MKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQEtLKTH 872
Cdd:PRK11281 169 SQRLQ-QIRNLLKGGKVGGKALrpsqrVLLQAEQALLNAQNDLQRKSLEGNTQLQDLLQKQRDYLTARIQRLEHQ-LQLL 246
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 873 QEELKkmQDQLTDMKKQMETSQNQykdlQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKN-------DELeT 945
Cdd:PRK11281 247 QEAIN--SKRLTLSEKTVQEAQSQ----DEAARIQANPLVAQELEINLQLSQRLLKATEKLNTLTQQNlrvknwlDRL-T 319
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 946 QAEELKKqaEQAKSLSSVLASAR------------KEIELMSDKMRDLISEKETLAQERNTLklekeSLLSQHLEMeski 1013
Cdd:PRK11281 320 QSERNIK--EQISVLKGSLLLSRilyqqqqalpsaDLIEGLADRIADLRLEQFEINQQRDAL-----FQPDAYIDK---- 388
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1014 lLVQQDreelwtkNEELNSENKKILKQKeaaeAKSRQESTEKvaLISEKSKLLSEIETAQADLLKITQENDALRsseSTL 1093
Cdd:PRK11281 389 -LEAGH-------KSEVTDEVRDALLQL----LDERRELLDQ--LNKQLNNQLNLAINLQLNQQQLLSVSDSLQ---STL 451
|
490
....*....|.
gi 2024359640 1094 LQQLKELQANK 1104
Cdd:PRK11281 452 TQQIFWVNSNK 462
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
865-1131 |
4.88e-04 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 45.01 E-value: 4.88e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 865 QQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEketsEMITKHDADIKGFKQNLLDAEEALKAAQKkndELE 944
Cdd:PHA02562 179 LNQQIQTLDMKIDHIQQQIKTYNKNIEEQRKKNGENIARKQ----NKYDELVEEAKTIKAEIEELTDELLNLVM---DIE 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 945 TQAEELKKQAEQAKSLSSVLASARKEIELMSDK------MRDLISEKETLAQERNTLKlekesllsqhlEMESKILLVQQ 1018
Cdd:PHA02562 252 DPSAALNKLNTAAAKIKSKIEQFQKVIKMYEKGgvcptcTQQISEGPDRITKIKDKLK-----------ELQHSLEKLDT 320
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1019 DREELWTKNEELNSENKKILKQKeaaeAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQEndalrssestllqqLK 1098
Cdd:PHA02562 321 AIDELEEIMDEFNEQSKKLLELK----NKISTNKQSLITLVDKAKKVKAAIEELQAEFVDNAEE--------------LA 382
|
250 260 270
....*....|....*....|....*....|...
gi 2024359640 1099 ELQANKDAVDVACQKHIKEREELEHYQKLLEEN 1131
Cdd:PHA02562 383 KLQDELDKIVKTKSELVKEKYHRGIVTDLLKDS 415
|
|
| CLIP1_ZNF |
pfam16641 |
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of ... |
2029-2046 |
5.42e-04 |
|
CLIP1 zinc knuckle; This zinc knuckle domain is found tandemly repeated at the C-terminal of the cytoplasmic linker protein CLIP1 (CLIP170). It forms a complex with the CAP-Gly domain of Dynactin.
Pssm-ID: 465212 Cd Length: 17 Bit Score: 38.99 E-value: 5.42e-04
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
420-632 |
5.47e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 5.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 420 AADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEK 499
Cdd:COG4942 17 AQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELR 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 500 SRIMELERDLALRVKeVAELRGR------LESSKHIDDVDTSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEA 573
Cdd:COG4942 97 AELEAQKEELAELLR-ALYRLGRqpplalLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359640 574 LRKEIKTLSASNERMGKENESLKTKLDHANKEnsdvielwKSKLESAIASHQQAMEELK 632
Cdd:COG4942 176 LEALLAELEEERAALEALKAERQKLLARLEKE--------LAELAAELAELQQEAEELE 226
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
737-967 |
6.30e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 44.44 E-value: 6.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 737 SAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDsS 816
Cdd:COG3883 13 FADPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGE-R 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 817 AQLMKMNDELRLKERQLEQIQlELTKANEKAVQLQKNVEQTAQKAEQ--SQQETLKTHQEELKKMQDQLTDMKKQMETSQ 894
Cdd:COG3883 92 ARALYRSGGSVSYLDVLLGSE-SFSDFLDRLSALSKIADADADLLEElkADKAELEAKKAELEAKLAELEALKAELEAAK 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024359640 895 NQYKDLQAKYEKETsemitkhdADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASA 967
Cdd:COG3883 171 AELEAQQAEQEALL--------AQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAA 235
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
672-1032 |
6.82e-04 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 45.04 E-value: 6.82e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 672 ENEKSQHLKEIEALKakllevTEEKEQTLENLKAKLESVEDQhlvemedtlnklQEAEIKKEKFTSAVDGAENAQRAMQE 751
Cdd:PRK10929 25 EKQITQELEQAKAAK------TPAQAEIVEALQSALNWLEER------------KGSLERAKQYQQVIDNFPKLSAELRQ 86
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 752 TINKLNQKEEQFA--LMSSELEQ--LKSNLTVMETKLKEREERE-------------QQLTEAKvKLENDIAEIMKSSGD 814
Cdd:PRK10929 87 QLNNERDEPRSVPpnMSTDALEQeiLQVSSQLLEKSRQAQQEQDrareisdslsqlpQQQTEAR-RQLNEIERRLQTLGT 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 815 SSAQLmkmndelrlkerqlEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQ 894
Cdd:PRK10929 166 PNTPL--------------AQAQLTALQAESAALKALVDELELAQLSANNRQELARLRSELAKKRSQQLDAYLQALRNQL 231
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 895 NQYKDLQAKYEKETSEMITKHDAD-----IKGFKQNlLDAEEALKAAQKKNDELETQAEELKKQA-----------EQAK 958
Cdd:PRK10929 232 NSQRQREAERALESTELLAEQSGDlpksiVAQFKIN-RELSQALNQQAQRMDLIASQQRQAASQTlqvrqalntlrEQSQ 310
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 959 SL--SSVLASA-RKEIELMSD--KMRDLISEKETLAQERntLK----LEKESLLSQHLEMESKILLVQQDR---EELWTK 1026
Cdd:PRK10929 311 WLgvSNALGEAlRAQVARLPEmpKPQQLDTEMAQLRVQR--LRyedlLNKQPQLRQIRQADGQPLTAEQNRildAQLRTQ 388
|
....*.
gi 2024359640 1027 NEELNS 1032
Cdd:PRK10929 389 RELLNS 394
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
680-867 |
7.56e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.62 E-value: 7.56e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 680 KEIEALKAKLlevtEEKEQTLENLKAK-----LESVEDQHLVEMEDTLNKLQEAEIKKEKFTSAVDGAENAQRAMQETIN 754
Cdd:COG3206 182 EQLPELRKEL----EEAEAALEEFRQKnglvdLSEEAKLLLQQLSELESQLAEARAELAEAEARLAALRAQLGSGPDALP 257
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 755 KLNQkEEQFALMSSELEQLKSNLTVMETKLKEREER----EQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMNDELRLKE 830
Cdd:COG3206 258 ELLQ-SPVIQQLRAQLAELEAELAELSARYTPNHPDvialRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQL 336
|
170 180 190 200
....*....|....*....|....*....|....*....|....
gi 2024359640 831 RQLEQIQLELTKANEKAVQLQKNVE-------QTAQKAEQSQQE 867
Cdd:COG3206 337 AQLEARLAELPELEAELRRLEREVEvarelyeSLLQRLEEARLA 380
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
1475-1738 |
8.04e-04 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 44.53 E-value: 8.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1475 ILNRERTELQDKCQKLtG--EVENMKENLTVEkkaRILDKESfllERMELQNNIGFLEKEVEemreknKEFLTEKELLVQ 1552
Cdd:PRK05771 13 TLKSYKDEVLEALHEL-GvvHIEDLKEELSNE---RLRKLRS---LLTKLSEALDKLRSYLP------KLNPLREEKKKV 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1553 EKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHScVSVMLDELQHK-------YEVTEKEKM 1625
Cdd:PRK05771 80 SVKSLEELIKDVEEELEKIEKEIKELEEEISELENEIKELEQEIERLEPWGN-FDLDLSLLLGFkyvsvfvGTVPEDKLE 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1626 ELVQENESLHAEWKS-------LVIINEeilkekeklsKEYYKLHEKVVAlleqtDADFScRLLVSEGKH--ELLLEEMS 1696
Cdd:PRK05771 159 ELKLESDVENVEYIStdkgyvyVVVVVL----------KELSDEVEEELK-----KLGFE-RLELEEEGTpsELIREIKE 222
|
250 260 270 280
....*....|....*....|....*....|....*....|..
gi 2024359640 1697 NLALKLREIERLQAQTfmqKFEADKRAEEVLQTMEKVTKEKD 1738
Cdd:PRK05771 223 ELEEIEKERESLLEEL---KELAKKYLEELLALYEYLEIELE 261
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1767-1999 |
8.24e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.62 E-value: 8.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1767 MLKQNNLKNEEELTKSKELLNlenKKVEELKKEFEAL--KLAAAQKSQQLAALQEENVKLAEELGRSRDEVTshqKLEEE 1844
Cdd:COG3206 161 YLEQNLELRREEARKALEFLE---EQLPELRKELEEAeaALEEFRQKNGLVDLSEEAKLLLQQLSELESQLA---EARAE 234
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1845 RSVLNNQLLEMKKSLPSN-----TLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGEnaSAKTLQ 1919
Cdd:COG3206 235 LAEAEARLAALRAQLGSGpdalpELLQSPVIQQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQ--LQQEAQ 312
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1920 SVVKTLESDKLKLEEKVKNLEQKLKAKSEQpltvtspsgdiAANLLQDES-AEDKQQEIDFLNSVIVDLQRRNEELNLKI 1998
Cdd:COG3206 313 RILASLEAELEALQAREASLQAQLAQLEAR-----------LAELPELEAeLRRLEREVEVARELYESLLQRLEEARLAE 381
|
.
gi 2024359640 1999 Q 1999
Cdd:COG3206 382 A 382
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
356-797 |
8.34e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 44.37 E-value: 8.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 356 EALKEKQQHIEQLLAERDLERAEVAKATSHVGEIEQELALVRDGHDRHvlEMEAKMDQLRAMVEAADREKVELLNQLEEE 435
Cdd:COG4717 81 KEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLL--PLYQELEALEAELAELPERLEELEERLEEL 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 436 KRKVEDLQFRVEEesitkgdletQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKE 515
Cdd:COG4717 159 RELEEELEELEAE----------LAELQEELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEE 228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 516 VAELRGRLESSKHIDDVDTSLSLLQEISSLQEKMAAAGkehqremsSLKEKFESSEEALRKEIKTLSASNERMGKENESL 595
Cdd:COG4717 229 LEQLENELEAAALEERLKEARLLLLIAAALLALLGLGG--------SLLSLILTIAGVLFLVLGLLALLFLLLAREKASL 300
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 596 KTKLDHANKEnsDVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFAELKTQMEKVKLDYENEmsnlklKQENEK 675
Cdd:COG4717 301 GKEAEELQAL--PALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLE------ELEQEI 372
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 676 SQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQ---HLVEMEDTLNKLQEAEIKKEkftsavdgAENAQRAMQET 752
Cdd:COG4717 373 AALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQleeLLGELEELLEALDEEELEEE--------LEELEEELEEL 444
|
410 420 430 440
....*....|....*....|....*....|....*....|....*
gi 2024359640 753 INKLNQKEEQFALMSSELEQLKSNLTVMEtKLKEREEREQQLTEA 797
Cdd:COG4717 445 EEELEELREELAELEAELEQLEEDGELAE-LLQELEELKAELREL 488
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
406-1426 |
8.77e-04 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 44.66 E-value: 8.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 406 EMEAKMDQLRAMVEAADREKVELLNQLEEEKRKVEDLQ----------FRVEEESITKGDLETQTKlehARIKELEQSLL 475
Cdd:TIGR01612 541 EIEAGLKESYELAKNWKKLIHEIKKELEEENEDSIHLEkeikdlfdkyLEIDDEIIYINKLKLELK---EKIKNISDKNE 617
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 476 FEKtKADKLQRELEDTRvATVSEKSRIMELERDLALRVKEVAELRGRLESSK-HIDDVDtslSLLQEISSLQEKMAAAGK 554
Cdd:TIGR01612 618 YIK-KAIDLKKIIENNN-AYIDELAKISPYQVPEHLKNKDKIYSTIKSELSKiYEDDID---ALYNELSSIVKENAIDNT 692
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 555 EHQREMSSLKEKFESSEEALRK-EIKTLSASNERM-GKENESLKTKLD-------HANKENSDVIELWKSK---LESAIA 622
Cdd:TIGR01612 693 EDKAKLDDLKSKIDKEYDKIQNmETATVELHLSNIeNKKNELLDIIVEikkhihgEINKDLNKILEDFKNKekeLSNKIN 772
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 623 SHQQAMEEL-----KVSFNKGVGAQTAEFAELKTQMEKVKLDYENEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKE 697
Cdd:TIGR01612 773 DYAKEKDELnkyksKISEIKNHYNDQINIDNIKDEDAKQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDFLNKVDKFI 852
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 698 QTLENLKAKLESVEDQ-----HLVEMEDTLNKLQEAEIKKEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQ 772
Cdd:TIGR01612 853 NFENNCKEKIDSEHEQfaeltNKIKAEISDDKLNDYEKKFNDSKSLINEINKSIEEEYQNINTLKKVDEYIKICENTKES 932
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 773 LKsNLTVMETKLKE-------------------REEREQQLTEAKVKLENDIAEIMKSSGDS-SAQLMKMNDELRL---- 828
Cdd:TIGR01612 933 IE-KFHNKQNILKEilnknidtikesnlieksyKDKFDNTLIDKINELDKAFKDASLNDYEAkNNELIKYFNDLKAnlgk 1011
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 829 -KERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEEL-----KKMQDQLTDMKKQMETSQNQYKDLQA 902
Cdd:TIGR01612 1012 nKENMLYHQFDEKEKATNDIEQKIEDANKNIPNIEIAIHTSIYNIIDEIekeigKNIELLNKEILEEAEINITNFNEIKE 1091
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 903 KYE-------------KETSEmITKHDADIKGFKQ----NLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLA 965
Cdd:TIGR01612 1092 KLKhynfddfgkeeniKYADE-INKIKDDIKNLDQkidhHIKALEEIKKKSENYIDEIKAQINDLEDVADKAISNDDPEE 1170
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 966 SARKEIELMS---------DKMRDLISEKETLAQERNTL--------------------KLEKESLLSQHL--EMESKIl 1014
Cdd:TIGR01612 1171 IEKKIENIVTkidkkkniyDEIKKLLNEIAEIEKDKTSLeevkginlsygknlgklfleKIDEEKKKSEHMikAMEAYI- 1249
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1015 lvqQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKS--KLLSEIETAQADLLKITQENDALRSSEST 1092
Cdd:TIGR01612 1250 ---EDLDEIKEKSPEIENEMGIEMDIKAEMETFNISHDDDKDHHIISKKhdENISDIREKSLKIIEDFSEESDINDIKKE 1326
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1093 LLQQLKELQANKDAVDVACQK-----------HIKE-REELEHYQKLLEENDRVIKDKDDVIQRL-QSSYDDLARNQREL 1159
Cdd:TIGR01612 1327 LQKNLLDAQKHNSDINLYLNEianiynilklnKIKKiIDEVKEYTKEIEENNKNIKDELDKSEKLiKKIKDDINLEECKS 1406
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1160 LQEVSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREelcvsLANTANEnQALKLRKDEMQTE 1239
Cdd:TIGR01612 1407 KIESTLDDKDIDECIKKIKELKNHILSEESNIDTYFKNADENNENVLLLFKNIE-----MADNKSQ-HILKIKKDNATND 1480
|
970 980 990 1000 1010 1020 1030 1040
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1240 LETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREASNSEKIHLLQEalfASEQRLLAEREELVNENKAVTEKLTKAT 1319
Cdd:TIGR01612 1481 HDFNINELKEHIDKSKGCKDEADKNAKAIEKNKELFEQYKKDVTELLNK---YSALAIKNKFAKTKKDSEIIIKEIKDAH 1557
|
1050 1060 1070 1080 1090 1100 1110 1120
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1320 ADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEALLREK---DELERKYSELLDEKKSLENAFSDM----KREQELD 1392
Cdd:TIGR01612 1558 KKFILEAEKSEQKIKEIKKEKFRIEDDAAKNDKSNKAAIDIQlslENFENKFLKISDIKKKINDCLKETesieKKISSFS 1637
|
1130 1140 1150
....*....|....*....|....*....|....*.
gi 2024359640 1393 FSAKRLLVQENTTLKYSIEALEEELK--KKNLENQE 1426
Cdd:TIGR01612 1638 IDSQDTELKENGDNLNSLQEFLESLKdqKKNIEDKK 1673
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
672-1046 |
9.34e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.56 E-value: 9.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 672 ENEKSQHLKEIEALKAKLLEVTEE---KEQTLENLKAKL-ESVEDQHLVEME-----DTLNKLQEAEIKKEKFTSAVDG- 741
Cdd:PRK04863 278 ANERRVHLEEALELRRELYTSRRQlaaEQYRLVEMARELaELNEAESDLEQDyqaasDHLNLVQTALRQQEKIERYQADl 357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 742 ------AENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLE-----NDIAEI-M 809
Cdd:PRK04863 358 eeleerLEEQNEVVEEADEQQEENEARAEAAEEEVDELKSQLADYQQALDVQQTRAIQYQQAVQALErakqlCGLPDLtA 437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 810 KSSGDSSAQLMKMNDELRLKERQLEQiQLELTKAN----EKAVQLQKNV--EQTAQKAEQSQQETLKTHQEElkKMQDQl 883
Cdd:PRK04863 438 DNAEDWLEEFQAKEQEATEELLSLEQ-KLSVAQAAhsqfEQAYQLVRKIagEVSRSEAWDVARELLRRLREQ--RHLAE- 513
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 884 tdmkkQMETSQNQYKDLQAKYEKETsemitkhdadikgfkqnllDAEEALKAAQKK-------NDELETQAEELKKQAEQ 956
Cdd:PRK04863 514 -----QLQQLRMRLSELEQRLRQQQ-------------------RAERLLAEFCKRlgknlddEDELEQLQEELEARLES 569
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 957 AKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTL--KLEK---------------ESLLSQHLEMESKIllvQQD 1019
Cdd:PRK04863 570 LSESVSEARERRMALRQQLEQLQARIQRLAARAPAWLAAqdALARlreqsgeefedsqdvTEYMQQLLEREREL---TVE 646
|
410 420
....*....|....*....|....*..
gi 2024359640 1020 REELWTKNEELNSENKKiLKQKEAAEA 1046
Cdd:PRK04863 647 RDELAARKQALDEEIER-LSQPGGSED 672
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
700-1252 |
1.20e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 44.12 E-value: 1.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 700 LENLKAKLESVEDQHlvemEDTLNKLQEAEIKkekftsaVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTV 779
Cdd:PRK01156 199 LENIKKQIADDEKSH----SITLKEIERLSIE-------YNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAESDLSM 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 780 ME---TKLKEREEREQQLTEAKV-KLENDIAEIMKSSGDssaqlmkmndeLRLKERQLEQIQLELTKANE---KAVQLQK 852
Cdd:PRK01156 268 ELeknNYYKELEERHMKIINDPVyKNRNYINDYFKYKND-----------IENKKQILSNIDAEINKYHAiikKLSVLQK 336
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 853 nveqtaqkaEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDADIKGFKQNLLDAEEA 932
Cdd:PRK01156 337 ---------DYNDYIKKKSRYDDLNNQILELEGYEMDYNSYLKSIESLKKKIEEYSKNIERMSAFISEILKIQEIDPDAI 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 933 LKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEketlaqerNTLKLEKESLLSQHLEMESK 1012
Cdd:PRK01156 408 KKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCPVCG--------TTLGEEKSNHIINHYNEKKS 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1013 ILlvQQDREELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADL----LKITQENDALRS 1088
Cdd:PRK01156 480 RL--EEKIREIEIEVKDIDEKIVDLKKRKEYLESEEINKSINEYNKIESARADLEDIKIKINELkdkhDKYEEIKNRYKS 557
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1089 SESTLLQQLKE----LQANKDAVDVACQKHIKE--REELEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELLQE 1162
Cdd:PRK01156 558 LKLEDLDSKRTswlnALAVISLIDIETNRSRSNeiKKQLNDLESRLQEIEIGFPDDKSYIDKSIREIENEANNLNNKYNE 637
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1163 VSILTAERDSAQEKDLDLKSTHIALKNEIDCLLQTNRSLQSEKEMLLKSREELCVSLANTANEN---QALKLRKDEMQTE 1239
Cdd:PRK01156 638 IQENKILIEKLRGKIDNYKKQIAEIDSIIPDLKEITSRINDIEDNLKKSRKALDDAKANRARLEstiEILRTRINELSDR 717
|
570
....*....|...
gi 2024359640 1240 LETEREKLEKMTK 1252
Cdd:PRK01156 718 INDINETLESMKK 730
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
942-1543 |
1.22e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.14 E-value: 1.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 942 ELETQAEELKKQAEQAKSLSSVLASARKEIELMSDkMRDLISEKETLAQERNTLKLEKESLlsQHLEMESKILLVQQDRE 1021
Cdd:COG4913 222 DTFEAADALVEHFDDLERAHEALEDAREQIELLEP-IRELAERYAAARERLAELEYLRAAL--RLWFAQRRLELLEAELE 298
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1022 ELwtkneelnsenkkilkQKEAAEAKSRQESTEKvalisekskllsEIETAQADLLKITQendALRSSESTLLQQLKELQ 1101
Cdd:COG4913 299 EL----------------RAELARLEAELERLEA------------RLDALREELDELEA---QIRGNGGDRLEQLEREI 347
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1102 ANKdavdvacQKHIKERE-ELEHYQKLLEendrvikdkdDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDL 1180
Cdd:COG4913 348 ERL-------ERELEERErRRARLEALLA----------ALGLPLPASAEEFAALRAEAAALLEALEEELEALEEALAEA 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1181 KSTHIALKNEIDCLLQTNRSLQSEK----EMLLKSREELCvslantanenQALKLRKDE-------MQTELETER----- 1244
Cdd:COG4913 411 EAALRDLRRELRELEAEIASLERRKsnipARLLALRDALA----------EALGLDEAElpfvgelIEVRPEEERwrgai 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1245 ---------------EKLEKMTK--DNMDLKASLSS--LSNFLEEMKSSREASNS--EKIHLLQEALFASEQRLLAER-- 1301
Cdd:COG4913 481 ervlggfaltllvppEHYAAALRwvNRLHLRGRLVYerVRTGLPDPERPRLDPDSlaGKLDFKPHPFRAWLEAELGRRfd 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1302 -------EELVNENKAVT-EKLTKATADA-------------VLAETAfTEKINELNLEKesvfskslqfekhnEALLRE 1360
Cdd:COG4913 561 yvcvdspEELRRHPRAITrAGQVKGNGTRhekddrrrirsryVLGFDN-RAKLAALEAEL--------------AELEEE 625
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1361 KDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTtlkysIEALEEELKKKNLENQELIAcrsdLSDLLKE 1440
Cdd:COG4913 626 LAEAEERLEALEAELDALQERREALQRLAEYSWDEIDVASAERE-----IAELEAELERLDASSDDLAA----LEEQLEE 696
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1441 AQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQK-LTGEVENMKENLTVEKKARILdKESFLLER 1519
Cdd:COG4913 697 LEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLeLRALLEERFAAALGDAVEREL-RENLEERI 775
|
650 660
....*....|....*....|....*
gi 2024359640 1520 MELQNNIGFLEKEVEE-MREKNKEF 1543
Cdd:COG4913 776 DALRARLNRAEEELERaMRAFNREW 800
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1039-1278 |
1.24e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1039 KQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQAdllKITQENDALRSSESTLLQQLKELQANkdavdvacqkhikeR 1118
Cdd:COG4942 27 AELEQLQQEIAELEKELAALKKEEKALLKQLAALER---RIAALARRIRALEQELAALEAELAEL--------------E 89
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1119 EELEHYQKLLEENDRVIKDKDDVIQRL-QSSYDDLARNQRELLQEVSILTAerdsaqekdldLKSTHIALKNEIDCLLQT 1197
Cdd:COG4942 90 KEIAELRAELEAQKEELAELLRALYRLgRQPPLALLLSPEDFLDAVRRLQY-----------LKYLAPARREQAEELRAD 158
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1198 NRSLQSEKEMLLKSREELCVSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKASLSSLSNFLEEMKSSREA 1277
Cdd:COG4942 159 LAELAALRAELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAA 238
|
.
gi 2024359640 1278 S 1278
Cdd:COG4942 239 A 239
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
941-1328 |
1.29e-03 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 43.52 E-value: 1.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 941 DELETQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDR 1020
Cdd:pfam19220 20 EDLRSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERAAYGKLRRELAGLTRRLSAAEGELEELVARLAKLEAAL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1021 EELWTKNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIETAQADLLKITQENDALRSSESTLLQQLKEL 1100
Cdd:pfam19220 100 REAEAAKEELRIELRDKTAQAEALERQLAAETEQNRALEEENKALREEAQAAEKALQRAEGELATARERLALLEQENRRL 179
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1101 QANKDAVDVACQKHIKEREELEhyqKLLEENDRVIkdkDDVIQRLQSSYDDLARNQRELLQEVSILTAERDSAQEKDLDL 1180
Cdd:pfam19220 180 QALSEEQAAELAELTRRLAELE---TQLDATRARL---RALEGQLAAEQAERERAEAQLEEAVEAHRAERASLRMKLEAL 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1181 KSTHIALkneiDCLLQTNRSLQSEKEMLLKSREElcvSLANTANENQALKLRKDEMQTELETEREKLEKMTKDNMDLKAS 1260
Cdd:pfam19220 254 TARAAAT----EQLLAEARNQLRDRDEAIRAAER---RLKEASIERDTLERRLAGLEADLERRTQQFQEMQRARAELEER 326
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 2024359640 1261 LSSLSNFLEEmKSSREASNSEKIHLLQEALFASEQRLLAEREELVNENKAVTEKLTKATADAVLAETA 1328
Cdd:pfam19220 327 AEMLTKALAA-KDAALERAEERIASLSDRIAELTKRFEVERAALEQANRRLKEELQRERAERALAQGA 393
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
1701-1823 |
1.37e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 43.61 E-value: 1.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1701 KLREIERlQAQTFMQkfEADKRAEEVLQtmEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELdMLKQNNLKN----- 1775
Cdd:PRK12704 32 KIKEAEE-EAKRILE--EAKKEAEAIKK--EALLEAKEEIHKLRNEFEKELRERRNELQKLEKRL-LQKEENLDRklell 105
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|.
gi 2024359640 1776 ---EEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVK 1823
Cdd:PRK12704 106 ekrEEELEKKEKELEQKQQELEKKEEELEELIEEQLQELERISGLTAEEAK 156
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
483-956 |
1.41e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 43.79 E-value: 1.41e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 483 KLQRELEDTRVATVSEKSRIMELERDLAlrvkEVAELRGRLE-----SSKHiddvdtsLSLLQEISSLQEKMAAagkeHQ 557
Cdd:COG3096 289 ELRRELFGARRQLAEEQYRLVEMARELE----ELSARESDLEqdyqaASDH-------LNLVQTALRQQEKIER----YQ 353
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 558 REMSSLKEKFESSEEAL---RKEIKTLSASNERMGKENESLKTKLdhankensdvielwksklesaiASHQQAMEELkvs 634
Cdd:COG3096 354 EDLEELTERLEEQEEVVeeaAEQLAEAEARLEAAEEEVDSLKSQL----------------------ADYQQALDVQ--- 408
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 635 fnkgvgaQTAefaelktqmekvKLDYENEMSNLklkqenEKSQHLKEIEALKAkllevtEEKEQTLENLKAKLESVeDQH 714
Cdd:COG3096 409 -------QTR------------AIQYQQAVQAL------EKARALCGLPDLTP------ENAEDYLAAFRAKEQQA-TEE 456
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 715 LVEMEdtlNKLQEAEIKKEKFTSA------VDGAENAQRAMQETINKLNQKEEQFALmSSELEQLKSNLTVMETKLKERE 788
Cdd:COG3096 457 VLELE---QKLSVADAARRQFEKAyelvckIAGEVERSQAWQTARELLRRYRSQQAL-AQRLQQLRAQLAELEQRLRQQQ 532
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 789 EREQQLTEakvklendiaeIMKSSGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQsqqet 868
Cdd:COG3096 533 NAERLLEE-----------FCQRIGQQLDAAEELEELLAELEAQLEELEEQAAEAVEQRSELRQQLEQLRARIKE----- 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 869 LKTHQEELKKMQDQLTDMKKQmetSQNQYKDLQakyeketsemitkhdaDIKGFKQNLLDAEEALKAAQkknDELETQAE 948
Cdd:COG3096 597 LAARAPAWLAAQDALERLREQ---SGEALADSQ----------------EVTAAMQQLLEREREATVER---DELAARKQ 654
|
....*...
gi 2024359640 949 ELKKQAEQ 956
Cdd:COG3096 655 ALESQIER 662
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
564-774 |
1.54e-03 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 43.48 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 564 KEKFESSEEALRKEIKTLSASNERMGKENE----SLKTKLDHAnkenSDVIELWKSKLESAIASHQQAMEELKVSfnKGV 639
Cdd:pfam05667 305 KLQFTNEAPAATSSPPTKVETEEELQQQREeeleELQEQLEDL----ESSIQELEKEIKKLESSIKQVEEELEEL--KEQ 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 640 GAQTAEFAELKTQMEKVKLDYENEMSNLKlkqeneksqhlKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEME 719
Cdd:pfam05667 379 NEELEKQYKVKKKTLDLLPDAEENIAKLQ-----------ALVDASAQRLVELAGQWEKHRVPLIEEYRALKEAKSNKED 447
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*
gi 2024359640 720 DTLNKLQEAEIKKEKftsavdgaenaqraMQETINKLNQKEEQFALMSSELEQLK 774
Cdd:pfam05667 448 ESQRKLEEIKELREK--------------IKEVAEEAKQKEELYKQLVAEYERLP 488
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
1332-1799 |
1.58e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 43.47 E-value: 1.58e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1332 KINELNLEKESVFSKSLQFEKHNEALLREKDELERKYSELLDEKKSLENAFSDMKREQELDFSAKRLLVQENTTLKYSIE 1411
Cdd:TIGR04523 191 KIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLS 270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1412 ALEEELKK-----KNLENQeLIACRSDLSDLLKE-AQDARRTLENELAAVSHAKQVLSS-------SFNTCSSDIEILNR 1478
Cdd:TIGR04523 271 EKQKELEQnnkkiKELEKQ-LNQLKSEISDLNNQkEQDWNKELKSELKNQEKKLEEIQNqisqnnkIISQLNEQISQLKK 349
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1479 ERTELQDKCQKLTGEVENMKENLTVEKKarilDKESFLLERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSE 1558
Cdd:TIGR04523 350 ELTNSESENSEKQRELEEKQNEIEKLKK----ENQSYKQEIKNLESQINDLESKIQNQEKLNQQKDEQIKKLQQEKELLE 425
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1559 TKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAELEDVHSCVSVM-------LDELQHKYEVTEKEKMELVQEN 1631
Cdd:TIGR04523 426 KEIERLKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSinkikqnLEQKQKELKSKEKELKKLNEEK 505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1632 ESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKVVALLEQTDADfscrllVSEGKHELLLEEMSNLALKLREIERLQAQ 1711
Cdd:TIGR04523 506 KELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKD------DFELKKENLEKEIDEKNKEIEELKQTQKS 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1712 TFMQKFEADKRAEEVLQTMEKVTKEKdaihQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENK 1791
Cdd:TIGR04523 580 LKKKQEEKQELIDQKEKEKKDLIKEI----EEKEKKISSLEKELEKAKKENEKLSSIIKNIKSKKNKLKQEVKQIKETIK 655
|
....*...
gi 2024359640 1792 KVEELKKE 1799
Cdd:TIGR04523 656 EIRNKWPE 663
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
416-777 |
1.74e-03 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 43.30 E-value: 1.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 416 AMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLEtQTKLEHARIKELEQSLlfEKTKADKLQRELEDTRVAT 495
Cdd:PLN03229 381 NMDELGKMDTEELLKHRMLKFRKIGGFQEGVPVDPERKVNMK-KREAVKTPVRELEGEV--EKLKEQILKAKESSSKPSE 457
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 496 VSEKSRIMELERDLALRVKEVAElrgrlesskhiddvdtSLSLLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALR 575
Cdd:PLN03229 458 LALNEMIEKLKKEIDLEYTEAVI----------------AMGLQERLENLREEFSKANSQDQLMHPVLMEKIEKLKDEFN 521
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 576 KEIKTLSASnermgkenESLKTKLDHANkensdviELWKSKlesAIASHQQAMEELKVSFNKGVgAQTAEFAELKTQMEK 655
Cdd:PLN03229 522 KRLSRAPNY--------LSLKYKLDMLN-------EFSRAK---ALSEKKSKAEKLKAEINKKF-KEVMDRPEIKEKMEA 582
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 656 VK-------------LDYENEMSNLKLKQENE-------KSQHLkEIEALKAKLLEVTEEkeQTLENLKAKLESVEDQHL 715
Cdd:PLN03229 583 LKaevassgassgdeLDDDLKEKVEKMKKEIElelagvlKSMGL-EVIGVTKKNKDTAEQ--TPPPNLQEKIESLNEEIN 659
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 716 VEMEDTLN--------KLQEAEIKKEKFTSAVDGAENAQRAMQETINKLNQkeeqfALMSSELEQLKSNL 777
Cdd:PLN03229 660 KKIERVIRssdlkskiELLKLEVAKASKTPDVTEKEKIEALEQQIKQKIAE-----ALNSSELKEKFEEL 724
|
|
| ClyA_Cry6Aa-like |
cd22656 |
Bacillus thuringiensis crystal 6Aa (Cry6Aa) toxin, and similar proteins; This model includes ... |
600-777 |
1.74e-03 |
|
Bacillus thuringiensis crystal 6Aa (Cry6Aa) toxin, and similar proteins; This model includes pesticidal Cry6Aa toxin from Bacillus thuringiensis, one of the many parasporal crystal (Cry) toxins produced during the sporulation phase of growth. Many of these proteins are toxic to numerous insect species and have been effectively used as proteinaceous insecticides to directly kill insect pests; some have been used to control insect growth on transgenic agricultural plants. Cry6Aa exists as a protoxin, which is activated by cleavage using trypsin. Structure studies for Cry6Aa support a mechanism of action by pore formation, similar to cytolysin A (ClyA)-type alpha pore-forming toxins (alpha-PFTs) such as HblB, and bioassay and mutation studies show that Cry6Aa is an active pore-forming toxin. Cry6Aa shows atypical features compared to other members of alpha-PFTs, including internal repeat sequences and small loop regions within major alpha helices.
Pssm-ID: 439154 [Multi-domain] Cd Length: 309 Bit Score: 42.74 E-value: 1.74e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 600 DHANKENSDVIELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFAELKTQMEKVKldyeNEMSNLKLKQENEKSQhL 679
Cdd:cd22656 84 NAGGTIDSYYAEILELIDDLADATDDEELEEAKKTIKALLDDLLKEAKKYQDKAAKVV----DKLTDFENQTEKDQTA-L 158
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 680 KEIEALKAKLL--EVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQ------EAEIKKEK-----FTSAVDGAENAQ 746
Cdd:cd22656 159 ETLEKALKDLLtdEGGAIARKEIKDLQKELEKLNEEYAAKLKAKIDELKaliaddEAKLAAALrliadLTAADTDLDNLL 238
|
170 180 190
....*....|....*....|....*....|.
gi 2024359640 747 RAMQETINKLNQKEEQFALMSSELEQLKSNL 777
Cdd:cd22656 239 ALIGPAIPALEKLQGAWQAIATDLDSLKDLL 269
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
1277-1499 |
1.87e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 1.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1277 ASNSEKIHLLQEALFASEQRLlAEREELVNENKAVTEKLTKATADAVLAETAFTEKINELNLEKESVFSKSLQFEKHNEA 1356
Cdd:COG4942 16 AAQADAAAEAEAELEQLQQEI-AELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAE 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1357 LLREKDELERKYSELLDE--KKSLENAFSDMKREQELDFSAKRL--LVQENTTLKYSIEALEEELKKKNLENQELIACRS 1432
Cdd:COG4942 95 LRAELEAQKEELAELLRAlyRLGRQPPLALLLSPEDFLDAVRRLqyLKYLAPARREQAEELRADLAELAALRAELEAERA 174
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 2024359640 1433 DLSDLLKEAQDARRTLENELAAVSHAKQVLSSSFNTCSSDIEILNRERTELQDKCQKLTGEVENMKE 1499
Cdd:COG4942 175 ELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAE 241
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
1521-1919 |
2.20e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.22 E-value: 2.20e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1521 ELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETEQLASKIEQLKSDFTSLSVSKAele 1600
Cdd:COG4717 50 RLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQ--- 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1601 dvhscvsvmLDELQHKYEVTEKEKMELVQENESLHAEWKSLviinEEILKEKEKLSKEYYKLHEKVVALLEQTDADFSCR 1680
Cdd:COG4717 127 ---------LLPLYQELEALEAELAELPERLEELEERLEEL----RELEEELEELEAELAELQEELEELLEQLSLATEEE 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1681 LLVSEGKHELLLEEMSNL--ALKLREIERLQAQTFMQKFEADKRAEEVLQTMEK-------------------------- 1732
Cdd:COG4717 194 LQDLAEELEELQQRLAELeeELEEAQEELEELEEELEQLENELEAAALEERLKEarlllliaaallallglggsllslil 273
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1733 -------------------VTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLENKKV 1793
Cdd:COG4717 274 tiagvlflvlgllallfllLAREKASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELL 353
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1794 EELKKEFEALKLAAAQKSQQlAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLpsNTLRESTLKKEI 1873
Cdd:COG4717 354 REAEELEEELQLEELEQEIA-ALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGEL--EELLEALDEEEL 430
|
410 420 430 440
....*....|....*....|....*....|....*....|....*.
gi 2024359640 1874 DEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQ 1919
Cdd:COG4717 431 EEELEELEEELEELEEELEELREELAELEAELEQLEEDGELAELLQ 476
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
688-1053 |
2.34e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 43.02 E-value: 2.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 688 KLLEVTEEKEQTLENLKAKLESVEDQHL-VEMEDTLNKLQEAEIKKEKFTSAVDGAENAQRAMQETI------NKLNQKE 760
Cdd:COG5185 236 KGFQDPESELEDLAQTSDKLEKLVEQNTdLRLEKLGENAESSKRLNENANNLIKQFENTKEKIAEYTksidikKATESLE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 761 EQFALM--SSELEQLKSNLTVMETKLKEREEREQ-QLTEAKVKLENDIAEIMKSSgdssaqlmkmndELRLKERQLEQIQ 837
Cdd:COG5185 316 EQLAAAeaEQELEESKRETETGIQNLTAEIEQGQeSLTENLEAIKEEIENIVGEV------------ELSKSSEELDSFK 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 838 LELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDA 917
Cdd:COG5185 384 DTIESTKESLDEIPQNQRGYAQEILATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREADEESQS 463
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 918 DIKgfkqnlldaeealKAAQKKNDELETQAEELKKQAEQAKS-LSSVLASARKEIELMSDKMRDLISEKETLAQERNTLK 996
Cdd:COG5185 464 RLE-------------EAYDEINRSVRSKKEDLNEELTQIESrVSTLKATLEKLRAKLERQLEGVRSKLDQVAESLKDFM 530
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*..
gi 2024359640 997 LEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQEST 1053
Cdd:COG5185 531 RARGYAHILALENLIPASELIQASNAKTDGQAANLRTAVIDELTQYLSTIESQQARE 587
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
751-1121 |
2.49e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.98 E-value: 2.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 751 ETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLMKMND------ 824
Cdd:PRK11281 46 DALNKQKLLEAEDKLVQQDLEQTLALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEALKDDNDEETRETLStlslrq 125
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 825 -ELRLKER--QLEQIQLELTKANEKAVQLQKNVEQtAQKA-EQSQQETlkthqEELKKMQDQLTDMKKQMETSQnqykdl 900
Cdd:PRK11281 126 lESRLAQTldQLQNAQNDLAEYNSQLVSLQTQPER-AQAAlYANSQRL-----QQIRNLLKGGKVGGKALRPSQ------ 193
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 901 QAKYEKETSEMITKHDadikgFKQNLLDAEEALKA-AQKKNDELetqAEELKKQAEQAKSLSSVLASarKEIELMSDKMR 979
Cdd:PRK11281 194 RVLLQAEQALLNAQND-----LQRKSLEGNTQLQDlLQKQRDYL---TARIQRLEHQLQLLQEAINS--KRLTLSEKTVQ 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 980 DLISEKETLAQERNTLkLEKESLLSQHLemeSKILLVQQDR------EELWTKN--EELNSENKKILKQKEAAEAK---S 1048
Cdd:PRK11281 264 EAQSQDEAARIQANPL-VAQELEINLQL---SQRLLKATEKlntltqQNLRVKNwlDRLTQSERNIKEQISVLKGSlllS 339
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359640 1049 RQESTEKVALISekSKLLSEIETAQADL----LKITQENDALrSSESTLLQQLKELQANK--DAVDVACQKHIKEREEL 1121
Cdd:PRK11281 340 RILYQQQQALPS--ADLIEGLADRIADLrleqFEINQQRDAL-FQPDAYIDKLEAGHKSEvtDEVRDALLQLLDERREL 415
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
1703-1945 |
2.53e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 43.21 E-value: 2.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1703 REIERLQAQTFMQKFEADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKS 1782
Cdd:PTZ00121 1278 RKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAAD 1357
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1783 KELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSN 1862
Cdd:PTZ00121 1358 EAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAK 1437
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1863 TLRESTLKKEIDEERASLQKSISDtsalITQKDEELEKLRNeitvLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQK 1942
Cdd:PTZ00121 1438 KKAEEAKKADEAKKKAEEAKKAEE----AKKKAEEAKKADE----AKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAK 1509
|
...
gi 2024359640 1943 LKA 1945
Cdd:PTZ00121 1510 KKA 1512
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
1723-1894 |
2.86e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.98 E-value: 2.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1723 AEEVLQTMEKVTKEKDAIHQEK---------IETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKskellnLENKKV 1793
Cdd:PRK11281 38 EADVQAQLDALNKQKLLEAEDKlvqqdleqtLALLDKIDRQKEETEQLKQQLAQAPAKLRQAQAELEA------LKDDND 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1794 EELKKEFEALKLAA-----AQKSQQLAALQE------------------------ENVKLAEEL---------GRSRDEV 1835
Cdd:PRK11281 112 EETRETLSTLSLRQlesrlAQTLDQLQNAQNdlaeynsqlvslqtqperaqaalyANSQRLQQIrnllkggkvGGKALRP 191
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 2024359640 1836 TSHQKLEEERSVLNNQLLEMKKSLPSNTLRESTLKKEID---EERASLQKSISDTSALITQK 1894
Cdd:PRK11281 192 SQRVLLQAEQALLNAQNDLQRKSLEGNTQLQDLLQKQRDyltARIQRLEHQLQLLQEAINSK 253
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
1742-1860 |
3.08e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 42.51 E-value: 3.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1742 QEKIETL-ASLENSRQTNEKLQNELDMLKQNNLKNEEELtkskellnleNKKVEELKKEFEALKLAAAQKSQQ-LAALQE 1819
Cdd:PRK00409 515 KEKLNELiASLEELERELEQKAEEAEALLKEAEKLKEEL----------EEKKEKLQEEEDKLLEEAEKEAQQaIKEAKK 584
|
90 100 110 120
....*....|....*....|....*....|....*....|....
gi 2024359640 1820 ENVKLAEELGRSRDEVTSHQK---LEEERSVLNNQLLEMKKSLP 1860
Cdd:PRK00409 585 EADEIIKELRQLQKGGYASVKaheLIEARKRLNKANEKKEKKKK 628
|
|
| CCDC73 |
pfam15818 |
Coiled-coil domain-containing protein 73 family; CCDC73 is a family of eukaryotic coiled-coil ... |
1508-1934 |
3.19e-03 |
|
Coiled-coil domain-containing protein 73 family; CCDC73 is a family of eukaryotic coiled-coil containing proteins. The function is not known. The alternative name is sarcoma antigen NY-SAR-79.
Pssm-ID: 464893 [Multi-domain] Cd Length: 1048 Bit Score: 42.63 E-value: 3.19e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1508 RILDKESFLLERME-----------LQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIKEKMILYKETE 1576
Cdd:pfam15818 1 QLLDFKTSLLEALEelrmrreaetqYEEQIGKIIVETQELKWQKETLQNQKETLAKQHKEAMAVFKKQLQMKMCALEEEK 80
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1577 ---QLASK-----IEQLKSDFTSLSVSKAELEDVhscVSVMLDELQ----------------HKYEVTEKEKMELVQEN- 1631
Cdd:pfam15818 81 gkyQLATEikekeIEGLKETLKALQVSKYSLQKK---VSEMEQKLQlhllakedhhkqlneiEKYYATITGQFGLVKENh 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1632 ESLHAEWKSLVIINEEILKEKEKLSKEYYKLHEKvvalLEQTDADFSCRLLVSEGKHElllEEMSNLALKLREIERLQAQ 1711
Cdd:pfam15818 158 GKLEQNVQEAIQLNKRLSALNKKQESEICSLKKE----LKKVTSDLIKSKVTCQYKMG---EENINLTIKEQKFQELQER 230
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1712 TFMQkfeadkraeevLQTMEKVTKEKDAIHQEKIETLAS-------LENSRQTNEKLQNELDMLKQNN--LKNEEELTKS 1782
Cdd:pfam15818 231 LNME-----------LELNKKINEEITHIQEEKQDIIISfqhmqqlLQQQTQANTEMEAELKALKENNqtLERDNELQRE 299
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1783 K------ELLNLENKKVEEL---KKEFEALKLAAAQKSQQLAALQEENVKLAEElgrsRDEVTSHQKLEEERSVLNNQLL 1853
Cdd:pfam15818 300 KvkeneeKFLNLQNEHEKALgtwKKHVEELNGEINEIKNELSSLKETHIKLQEH----YNKLCNQKKFEEDKKFQNVPEV 375
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1854 EMKKS-LPSNTLRESTLKKEIDEERASLQKSISDTSALITQKDEELEKLRNEITVLRGENASAKTLQSVVKTLESDKLKL 1932
Cdd:pfam15818 376 NNENSeMSTEKSENLIIQKYNSEQEIREENTKSFCSDTEYRETEKKKGPPVEEIIIEDLQVLEKSFKNEIDTSVPQDKNQ 455
|
..
gi 2024359640 1933 EE 1934
Cdd:pfam15818 456 SE 457
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
1718-1858 |
3.33e-03 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 42.53 E-value: 3.33e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1718 EADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELlnleNKKVEELK 1797
Cdd:pfam06160 267 EIEERIDQLYDLLEKEVDAKKYVEKNLPEIEDYLEHAEEQNKELKEELERVQQSYTLNENELERVRGL----EKQLEELE 342
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359640 1798 KEFEALKLAAAQKSQ--------------QLAALQEENVKLAEELGRSR-DEVTSHQKLEEERSVLNNQLLEMKKS 1858
Cdd:pfam06160 343 KRYDEIVERLEEKEVayselqeeleeileQLEEIEEEQEEFKESLQSLRkDELEAREKLDEFKLELREIKRLVEKS 418
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
457-688 |
3.67e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 3.67e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 457 ETQTKLE--HARIKELEQSLLFEKTKADKLQRELEDTRVATVSEKSRIMELERDLALRVKEVAELRGRlesskhIDDVDT 534
Cdd:COG4942 24 EAEAELEqlQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKE------IAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 535 SLSLLQEisSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKeIKTLSASNERMGKENESLKTKLDHANKENSDvIELWK 614
Cdd:COG4942 98 ELEAQKE--ELAELLRALYRLGRQPPLALLLSPEDFLDAVRR-LQYLKYLAPARREQAEELRADLAELAALRAE-LEAER 173
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 2024359640 615 SKLESAIASHQQAMEELKvsfnkgvgAQTAEFAELKTQMEKVKLDYENEMSNLKlKQENEKSQHLKEIEALKAK 688
Cdd:COG4942 174 AELEALLAELEEERAALE--------ALKAERQKLLARLEKELAELAAELAELQ-QEAEELEALIARLEAEAAA 238
|
|
| Surf_Exclu_PgrA |
TIGR04320 |
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface ... |
841-960 |
3.83e-03 |
|
SEC10/PgrA surface exclusion domain; This model describes a conserved domain found in surface proteins of a number of Firmutes. Many members have LPXTG C-terminal anchoring motifs and a substantial number have the KxYKxGKxW putative sorting signal at the N-terminus. The tetracycline resistance plasmid pCF10 in Enterococcus faecalis promotes conjugal plasmid transfer in response to sex pheromones, but PgrA/Sec10 encoded by that plasmid, a member of this family, specifically inhibits the ability of cells to receive homologous plasmids. The phenomenon is called surface exclusion.
Pssm-ID: 275124 [Multi-domain] Cd Length: 356 Bit Score: 42.02 E-value: 3.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 841 TKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMkkqmetsQNQYKDLQAKYEKETsemitkhdadik 920
Cdd:TIGR04320 256 LAALQAKLATAQADLAAAQTALNTAQAALTSAQTAYAAAQAALATA-------QKELANAQAQALQTA------------ 316
|
90 100 110 120
....*....|....*....|....*....|....*....|.
gi 2024359640 921 gfKQNLLDAEEALKAAQKKNDELETQAEELK-KQAEQAKSL 960
Cdd:TIGR04320 317 --QNNLATAQAALANAEARLAKAKEALANLNaDLAKKQAAL 355
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
672-868 |
4.08e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 41.74 E-value: 4.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 672 ENEKSQHLKEIEALKAKLLEVTEEKEQT---LENLKAKLESVEDQhLVEMEDTLNKLQEaEIKK-----------EKFTS 737
Cdd:COG3883 29 QAELEAAQAELDALQAELEELNEEYNELqaeLEALQAEIDKLQAE-IAEAEAEIEERRE-ELGEraralyrsggsVSYLD 106
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 738 AVDGAENAQramqETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSA 817
Cdd:COG3883 107 VLLGSESFS----DFLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLAELEALKAELEAAKAELEAQQAEQEA 182
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 2024359640 818 QLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQET 868
Cdd:COG3883 183 LLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAA 233
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
750-936 |
4.09e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 41.06 E-value: 4.09e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 750 QETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKSSGDSSAQLM--KMNDELR 827
Cdd:COG1579 13 QELDSELDRLEHRLKELPAELAELEDELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGnvRNNKEYE 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 828 LKERQLEQIQLELTKANEKAVQLQKNVEQtaqkaeqsqqetlktHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKE 907
Cdd:COG1579 93 ALQKEIESLKRRISDLEDEILELMERIEE---------------LEEELAELEAELAELEAELEEKKAELDEELAELEAE 157
|
170 180
....*....|....*....|....*....
gi 2024359640 908 TSEMITKHDADIKGFKQNLLDAEEALKAA 936
Cdd:COG1579 158 LEELEAEREELAAKIPPELLALYERIRKR 186
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
1718-1859 |
4.15e-03 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 42.13 E-value: 4.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1718 EADKRAEEVLQTMEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELlnleNKKVEELK 1797
Cdd:PRK04778 286 EIQERIDQLYDILEREVKARKYVEKNSDTLPDFLEHAKEQNKELKEEIDRVKQSYTLNESELESVRQL----EKQLESLE 361
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 2024359640 1798 KEFEALKLAAAQKSQ---QLAALQEENVKLAEELGRSRDEVTSH-QKLEEERSVLNNQLLEMKKSL 1859
Cdd:PRK04778 362 KQYDEITERIAEQEIaysELQEELEEILKQLEEIEKEQEKLSEMlQGLRKDELEAREKLERYRNKL 427
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
873-1047 |
4.15e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.21 E-value: 4.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 873 QEELKKMQDQLTDMKKQMETSQNQYKDLQAKyeKETSEMITKH---DADIKGFKQNLLDAEEALKAAQKKNDELETQAEE 949
Cdd:COG4913 616 EAELAELEEELAEAEERLEALEAELDALQER--REALQRLAEYswdEIDVASAEREIAELEAELERLDASSDDLAALEEQ 693
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 950 LKKQAEQAKSLSSVLASARKEIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWtknEE 1029
Cdd:COG4913 694 LEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEERFAAALGDAVERELR---EN 770
|
170
....*....|....*...
gi 2024359640 1030 LNSENKKILKQKEAAEAK 1047
Cdd:COG4913 771 LEERIDALRARLNRAEEE 788
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
668-1078 |
4.52e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 42.20 E-value: 4.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 668 KLKQENEKSQHLKE--------IEALKAKLLEVTEEKEQ-------TLENLKAKLESVEDQHLVemeDTLNKLQEA-EIK 731
Cdd:PLN02939 36 RARRRGFSSQQKKKrgkniapkQRSSNSKLQSNTDENGQlentslrTVMELPQKSTSSDDDHNR---ASMQRDEAIaAID 112
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 732 KEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLksnLTVMETKLKEREEREQQLTEAKVKL-ENDIAEIMK 810
Cdd:PLN02939 113 NEQQTNSKDGEQLSDFQLEDLVGMIQNAEKNILLLNQARLQA---LEDLEKILTEKEALQGKINILEMRLsETDARIKLA 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 811 SSGDSSAQLMkmndelrlkERQLEQIQLELTK--ANEKAVQLQKNVEQTAQKAEQSqqeTLKTHQEELKKMQDQLTDMKK 888
Cdd:PLN02939 190 AQEKIHVEIL---------EEQLEKLRNELLIrgATEGLCVHSLSKELDVLKEENM---LLKDDIQFLKAELIEVAETEE 257
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 889 QMetsqnqykdlqAKYEKETSEMitkhDADIKGFKQNLLDAEEAL--------KAAQKKNDELETQAEELKKQAEQAKSL 960
Cdd:PLN02939 258 RV-----------FKLEKERSLL----DASLRELESKFIVAQEDVsklsplqyDCWWEKVENLQDLLDRATNQVEKAALV 322
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 961 SSVLASARKEIELMSDKMRD-----LISEKETLAQERntLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENK 1035
Cdd:PLN02939 323 LDQNQDLRDKVDKLEASLKEanvskFSSYKVELLQQK--LKLLEERLQASDHEIHSYIQLYQESIKEFQDTLSKLKEESK 400
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 2024359640 1036 KILKQKEAAEAKSrqESTEKVALISEKSKLLSEIETAQADLLK 1078
Cdd:PLN02939 401 KRSLEHPADDMPS--EFWSRILLLIDGWLLEKKISNNDAKLLR 441
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
504-1172 |
4.96e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 42.12 E-value: 4.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 504 ELERDLALRVKEVAELRGRLESSKHIDDVDTSLSL----LQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEALRKEIK 579
Cdd:pfam10174 40 ELKKERALRKEEAARISVLKEQYRVTQEENQHLQLtiqaLQDELRAQRDLNQLLQQDFTTSPVDGEDKFSTPELTEENFR 119
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 580 TLSASNERMGKENESLKTKLDHANKEnsdvIELWKSKLESAIASHQQAMEELK--------VSFNKGVGAQTAEFAELKT 651
Cdd:pfam10174 120 RLQSEHERQAKELFLLRKTLEEMELR----IETQKQTLGARDESIKKLLEMLQskglpkksGEEDWERTRRIAEAEMQLG 195
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 652 QMEKVKLDYENEMSNLK--LKQENEKSQHLKEIEALKaKLLEVTEEKEQTLE----NLKAKLESVEDQHLVEMEDTLNKL 725
Cdd:pfam10174 196 HLEVLLDQKEKENIHLReeLHRRNQLQPDPAKTKALQ-TVIEMKDTKISSLErnirDLEDEVQMLKTNGLLHTEDREEEI 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 726 QEAEI----------KKEKFTSAVDGAENAQRAMQ---ETINK---------------LNQKEEQFALMSSELEQLKSNL 777
Cdd:pfam10174 275 KQMEVykshskfmknKIDQLKQELSKKESELLALQtklETLTNqnsdckqhievlkesLTAKEQRAAILQTEVDALRLRL 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 778 TVMETKLKEREEREQQLTEAKVKLENDIAEimkssgdssaqlmkMNDELRLKERQLEQIQ------LELTKANEKAVQLQ 851
Cdd:pfam10174 355 EEKESFLNKKTKQLQDLTEEKSTLAGEIRD--------------LKDMLDVKERKINVLQkkienlQEQLRDKDKQLAGL 420
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 852 KNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETSEMITKHDA---DIKGFKQNLLD 928
Cdd:pfam10174 421 KERVKSLQTDSSNTDTALTTLEEALSEKERIIERLKEQREREDRERLEELESLKKENKDLKEKVSAlqpELTEKESSLID 500
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 929 AEE---ALKAAQKKND--------ELETQAEELKKQAEQAKSLSSVLASARKEIElMSDKMRDLISEKETLAQERNTLKL 997
Cdd:pfam10174 501 LKEhasSLASSGLKKDsklksleiAVEQKKEECSKLENQLKKAHNAEEAVRTNPE-INDRIRLLEQEVARYKEESGKAQA 579
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 998 EKESLLSQHLEMESKILLVQQDREELWT------KNEELNSENKKILKQKEAAEAKSRQESTEKVALISEKSKLLSEIET 1071
Cdd:pfam10174 580 EVERLLGILREVENEKNDKDKKIAELESltlrqmKEQNKKVANIKHGQQEMKKKGAQLLEEARRREDNLADNSQQLQLEE 659
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1072 AQADLLKITQENDALRSSESTLLQQLKELQANKDAVDVACQKHIKEREELEHyQKLLEendrVIKDKDDVIQRLQSSYDD 1151
Cdd:pfam10174 660 LMGALEKTRQELDATKARLSSTQQSLAEKDGHLTNLRAERRKQLEEILEMKQ-EALLA----AISEKDANIALLELSSSK 734
|
730 740
....*....|....*....|.
gi 2024359640 1152 LARNQrellQEVSILTAERDS 1172
Cdd:pfam10174 735 KKKTQ----EEVMALKREKDR 751
|
|
| PRK11281 |
PRK11281 |
mechanosensitive channel MscK; |
898-1201 |
4.98e-03 |
|
mechanosensitive channel MscK;
Pssm-ID: 236892 [Multi-domain] Cd Length: 1113 Bit Score: 42.21 E-value: 4.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 898 KDLQAKYEKETSemITKHDADIKGFKQNLLDAEEALKAAQKKNDELEtqaeELKKQAEQAKSLssvLASARKEIELMSDk 977
Cdd:PRK11281 39 ADVQAQLDALNK--QKLLEAEDKLVQQDLEQTLALLDKIDRQKEETE----QLKQQLAQAPAK---LRQAQAELEALKD- 108
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 978 mrdliSEKETLAQERNTLKLEkesllsqhlEMESKILLVQQDREELwtkNEELNSENKKILKQkeaaeaksrQESTEKV- 1056
Cdd:PRK11281 109 -----DNDEETRETLSTLSLR---------QLESRLAQTLDQLQNA---QNDLAEYNSQLVSL---------QTQPERAq 162
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1057 ALISEKSKLLSEIETaqadLLKITQEND-ALRSSESTLLQ------------QLKELQANKDAVDVACQKHIKEREE--- 1120
Cdd:PRK11281 163 AALYANSQRLQQIRN----LLKGGKVGGkALRPSQRVLLQaeqallnaqndlQRKSLEGNTQLQDLLQKQRDYLTARiqr 238
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1121 LEHYQKLLEE--NDRVIKDKDDVIQRLQSSyDDLARNQ--RELLQEVSILTAERD---SAQEKDLDLKSTHIALKNEIDC 1193
Cdd:PRK11281 239 LEHQLQLLQEaiNSKRLTLSEKTVQEAQSQ-DEAARIQanPLVAQELEINLQLSQrllKATEKLNTLTQQNLRVKNWLDR 317
|
....*...
gi 2024359640 1194 LLQTNRSL 1201
Cdd:PRK11281 318 LTQSERNI 325
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
415-761 |
5.46e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 41.65 E-value: 5.46e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 415 RAMVEAADREKVELLNQLEEEK-RKVEDLQFRVEEESITKGDLETQTKL--EHARIKeLEQSLLFEKTKADKLQRELEDT 491
Cdd:pfam17380 287 RQQQEKFEKMEQERLRQEKEEKaREVERRRKLEEAEKARQAEMDRQAAIyaEQERMA-MERERELERIRQEERKRELERI 365
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 492 RVATVS-EKSRIMELERDLALRVKEVAELRGRLESSKhiddvdtslsllqEISSLQEKMAAAGKEHQREMSSLKEKfesS 570
Cdd:pfam17380 366 RQEEIAmEISRMRELERLQMERQQKNERVRQELEAAR-------------KVKILEEERQRKIQQQKVEMEQIRAE---Q 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 571 EEALRKEIKTLSASNERmgkeneslktkldhankensdviELWKSKLESAiaSHQQAMEELKvsfnkgvgAQTAEFAELK 650
Cdd:pfam17380 430 EEARQREVRRLEEERAR-----------------------EMERVRLEEQ--ERQQQVERLR--------QQEEERKRKK 476
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 651 TQMEKVKLDYE--NEMSNLKLKQENEKSQHLKEIEALKAKLLEVTEEKEQT--LENLKAKLESVEDQHLVEMEDTlNKLQ 726
Cdd:pfam17380 477 LELEKEKRDRKraEEQRRKILEKELEERKQAMIEEERKRKLLEKEMEERQKaiYEEERRREAEEERRKQQEMEER-RRIQ 555
|
330 340 350
....*....|....*....|....*....|....*
gi 2024359640 727 EAEIKKEKFTSAVDGAENAQRAMQETINKLNQKEE 761
Cdd:pfam17380 556 EQMRKATEERSRLEAMEREREMMRQIVESEKARAE 590
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
1493-2002 |
6.21e-03 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 41.65 E-value: 6.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1493 EVENMKENLTVEKKARILDKESfllERMELQNNIGFLEKEVEEMREKNKEFLTEKELLVQEKEKSETKLEEVIkEKMILY 1572
Cdd:pfam05557 6 ESKARLSQLQNEKKQMELEHKR---ARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEAEEALREQA-ELNRLK 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1573 KETEQLASKIEQLKSDftslsvSKAELEDVHSCVSVMLDELQHKYEVTEKEKMELVQENESLhaewkslviinEEILKEK 1652
Cdd:pfam05557 82 KKYLEALNKKLNEKES------QLADAREVISCLKNELSELRRQIQRAELELQSTNSELEEL-----------QERLDLL 144
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1653 EKLSKEYYKLHEkvvalleqtdadfscrllvsegKHELLLEEMSNLALKLREIERlQAQTFMQKFEADKRAEEVLQTMEK 1732
Cdd:pfam05557 145 KAKASEAEQLRQ----------------------NLEKQQSSLAEAEQRIKELEF-EIQSQEQDSEIVKNSKSELARIPE 201
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1733 VTKEKDAIHQEKietlASLENSRQTNEKLQNELDMLKQnNLKNEEELTKSKELLNLENKKVEELKKEFEALKLAAAQK-- 1810
Cdd:pfam05557 202 LEKELERLREHN----KHLNENIENKLLLKEEVEDLKR-KLEREEKYREEAATLELEKEKLEQELQSWVKLAQDTGLNlr 276
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1811 -----SQQLAALQEENVKLAEELG----RSRDEVTSHQKLEEERSVLNNQLLEMKKSLPSNT-------LRESTLKKEID 1874
Cdd:pfam05557 277 spedlSRRIEQLQQREIVLKEENSsltsSARQLEKARRELEQELAQYLKKIEDLNKKLKRHKalvrrlqRRVLLLTKERD 356
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1875 EERASLQK-----SISDTSALITQKDEELEKLRNEITVLRGEnasaktLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQ 1949
Cdd:pfam05557 357 GYRAILESydkelTMSNYSPQLLERIEEAEDMTQKMQAHNEE------MEAQLSVAEEELGGYKQQAQTLERELQALRQQ 430
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 2024359640 1950 PLTVTSPSgdiaanllQDESAEDKQQEIDFLNSVIVDLQRRNEELNLKIQRMC 2002
Cdd:pfam05557 431 ESLADPSY--------SKEEVDSLRRKLETLELERQRLREQKNELEMELERRC 475
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
674-968 |
6.49e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.86 E-value: 6.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 674 EKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVE----DQHLVEMEDTLNKLQEAEikkekftSAVDGAENAQRAM 749
Cdd:COG3096 840 ALRQRRSELERELAQHRAQEQQLRQQLDQLKEQLQLLNkllpQANLLADETLADRLEELR-------EELDAAQEAQAFI 912
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 750 QETINKLNQKEEQFALMSSELEQLKsNLTVMETKLKEREEREQQLTEAkvklendIAEIMK-----SSGDSSAQLMK--- 821
Cdd:COG3096 913 QQHGKALAQLEPLVAVLQSDPEQFE-QLQADYLQAKEQQRRLKQQIFA-------LSEVVQrrphfSYEDAVGLLGEnsd 984
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 822 MNDELRlkeRQLEQIQLELTKANEKAVQLQKNVEQtAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQMETSQNQykdlQ 901
Cdd:COG3096 985 LNEKLR---ARLEQAEEARREAREQLRQAQAQYSQ-YNQVLASLKSSRDAKQQTLQELEQELEELGVQADAEAEE----R 1056
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 2024359640 902 AKYEK-ETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAK-SLSSVLASAR 968
Cdd:COG3096 1057 ARIRRdELHEELSQNRSRRSQLEKQLTRCEAEMDSLQKRLRKAERDYKQEREQVVQAKaGWCAVLRLAR 1125
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
1047-1294 |
7.11e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 41.54 E-value: 7.11e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1047 KSRQESTEKVA--LISEKSKLLSEIETAQADLLKITQENDALRSSE--STLLQQLKELQANKDAVDVacqKHIKEREELE 1122
Cdd:COG3206 167 ELRREEARKALefLEEQLPELRKELEEAEAALEEFRQKNGLVDLSEeaKLLLQQLSELESQLAEARA---ELAEAEARLA 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1123 HYQKLLEENDRVIKD--KDDVIQRLQSSYDDLARNQRELLQevsiltaerdsaqekdlDLKSTH---IALKNEIDcllQT 1197
Cdd:COG3206 244 ALRAQLGSGPDALPEllQSPVIQQLRAQLAELEAELAELSA-----------------RYTPNHpdvIALRAQIA---AL 303
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1198 NRSLQSEKEMLLKSREelcvslantaNENQALKLRKDEMQTELETEREKLEKMTKD-------NMDLKASLSSLSNFLEE 1270
Cdd:COG3206 304 RAQLQQEAQRILASLE----------AELEALQAREASLQAQLAQLEARLAELPELeaelrrlEREVEVARELYESLLQR 373
|
250 260
....*....|....*....|....*.
gi 2024359640 1271 MKSSR--EASNSEKIHLLQEALFASE 1294
Cdd:COG3206 374 LEEARlaEALTVGNVRVIDPAVVPLK 399
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
414-727 |
7.17e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 41.42 E-value: 7.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 414 LRAMVEAADREKVELLNQLEEEKRKVEDLQFRVEEESITKGDLETQTKLEHARIKELEQSLLFEKTKADKLQRELEDTRV 493
Cdd:pfam07888 32 LQNRLEECLQERAELLQAQEAANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEKYKELSASSE 111
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 494 ATVSEKSRIMELERDLALRVKEVAELRGRLESSKHIDDVDtslslLQEISSLQEKMAAAGKEHQREMSSLKEKFESSEEA 573
Cdd:pfam07888 112 ELSEEKDALLAQRAAHEARIRELEEDIKTLTQRVLERETE-----LERMKERAKKAGAQRKEEEAERKQLQAKLQQTEEE 186
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 574 LRKEIKTL----------SASNERMGKENESLKTKLDHANK---ENSDVIELWKSKLESAIAShQQAMEELKVSFNKGVG 640
Cdd:pfam07888 187 LRSLSKEFqelrnslaqrDTQVLQLQDTITTLTQKLTTAHRkeaENEALLEELRSLQERLNAS-ERKVEGLGEELSSMAA 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 641 AQTAEFAEL-KTQMEKVKLDYENEMSNLKLKQE-----NEKSQHLKEIEALKAKLLEVTEE--------KEQTLENLKAK 706
Cdd:pfam07888 266 QRDRTQAELhQARLQAAQLTLQLADASLALREGrarwaQERETLQQSAEADKDRIEKLSAElqrleerlQEERMEREKLE 345
|
330 340
....*....|....*....|...
gi 2024359640 707 LE--SVEDQHLVEMEDTLNKLQE 727
Cdd:pfam07888 346 VElgREKDCNRVQLSESRRELQE 368
|
|
| CALCOCO1 |
pfam07888 |
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are ... |
352-738 |
7.23e-03 |
|
Calcium binding and coiled-coil domain (CALCOCO1) like; Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein coexpressed by Mus musculus (CoCoA/CALCOCO1). This protein binds to a highly conserved N-terminal domain of p160 coactivators, such as GRIP1, and thus enhances transcriptional activation by a number of nuclear receptors. CALCOCO1 has a central coiled-coil region with three leucine zipper motifs, which is required for its interaction with GRIP1 and may regulate the autonomous transcriptional activation activity of the C-terminal region.
Pssm-ID: 462303 [Multi-domain] Cd Length: 488 Bit Score: 41.42 E-value: 7.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 352 TALQEALKEKQQHIEQLLAERDleraevaKATSHVGEIEQELALVRDGHDRHVLEMEAKMDQLRAMVEAADREKVELLNQ 431
Cdd:pfam07888 30 ELLQNRLEECLQERAELLQAQE-------AANRQREKEKERYKRDREQWERQRRELESRVAELKEELRQSREKHEELEEK 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 432 LEEEKRKVEDLqfrveeeSITKGDLETQTKLEHARIKELE-------QSLLFEKTKADKLQRELEDTRVATVSEKSRIME 504
Cdd:pfam07888 103 YKELSASSEEL-------SEEKDALLAQRAAHEARIRELEediktltQRVLERETELERMKERAKKAGAQRKEEEAERKQ 175
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 505 LERDLALRVKEVAELRGRLESSK-HIDDVDTSLSLLQE-ISSLQEKMAAAGKEH------QREMSSLKEKFESSEEALrk 576
Cdd:pfam07888 176 LQAKLQQTEEELRSLSKEFQELRnSLAQRDTQVLQLQDtITTLTQKLTTAHRKEaenealLEELRSLQERLNASERKV-- 253
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 577 eiktlsasnERMGKENESLKTKLDHANKensdviELWKSKLESAIASHQQAMEELKVSFNKGVGAQTAEFAELKTQMEKV 656
Cdd:pfam07888 254 ---------EGLGEELSSMAAQRDRTQA------ELHQARLQAAQLTLQLADASLALREGRARWAQERETLQQSAEADKD 318
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 657 KLDYEN-EMSNLKLKQENEKSQHLK---EIEALKAKLLEVTEEKEQTLENLKAKLESVE---DQHLVEMEDTLNKLQEAE 729
Cdd:pfam07888 319 RIEKLSaELQRLEERLQEERMEREKlevELGREKDCNRVQLSESRRELQELKASLRVAQkekEQLQAEKQELLEYIRQLE 398
|
....*....
gi 2024359640 730 IKKEKFTSA 738
Cdd:pfam07888 399 QRLETVADA 407
|
|
| Mitofilin |
pfam09731 |
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. ... |
668-956 |
7.25e-03 |
|
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. Mitofilin is enriched in the narrow space between the inner boundary and the outer membranes, where it forms a homotypic interaction and assembles into a large multimeric protein complex. The first 78 amino acids contain a typical amino-terminal-cleavable mitochondrial presequence rich in positive-charged and hydroxylated residues and a membrane anchor domain. In addition, it has three centrally located coiled coil domains.
Pssm-ID: 430783 [Multi-domain] Cd Length: 618 Bit Score: 41.28 E-value: 7.25e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 668 KLKQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHlveMEDTLNKLQEAEIKKEKFT-SAVDGAENAQ 746
Cdd:pfam09731 116 KAQLPKSEQEKEKALEEVLKEAISKAESATAVAKEAKDDAIQAVKAH---TDSLKEASDTAEISREKATdSALQKAEALA 192
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 747 RAMQETINKLNQKEEQFAL-MSSELEQLKSNLTVMETKLKEREEREQ-------QLTEAKVKLENDIAEIMKS-----SG 813
Cdd:pfam09731 193 EKLKEVINLAKQSEEEAAPpLLDAAPETPPKLPEHLDNVEEKVEKAQslaklvdQYKELVASERIVFQQELVSifpdiIP 272
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 814 DSSAQLMKMNDELrlkERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELkkmqdqltdMKKQMETS 893
Cdd:pfam09731 273 VLKEDNLLSNDDL---NSLIAHAHREIDQLSKKLAELKKREEKHIERALEKQKEELDKLAEEL---------SARLEEVR 340
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 2024359640 894 QNQYKDLQAKYEKETSEMITKHDADIKGFKQnlldaEEALKAAQKKNDELETQAEELKKQAEQ 956
Cdd:pfam09731 341 AADEAQLRLEFEREREEIRESYEEKLRTELE-----RQAEAHEEHLKDVLVEQEIELQREFLQ 398
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
949-1185 |
7.91e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 41.07 E-value: 7.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 949 ELKKQAEQAKSLSSVLASARKeIELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEmeSKILLVQQDREELWTKNE 1028
Cdd:PRK05771 34 EDLKEELSNERLRKLRSLLTK-LSEALDKLRSYLPKLNPLREEKKKVSVKSLEELIKDVE--EELEKIEKEIKELEEEIS 110
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1029 ELNSENKKILKQKEAAE----------AKSRQESTE-KVALISEKSKLLSEIETAQADLLKITQEND-------ALRSSE 1090
Cdd:PRK05771 111 ELENEIKELEQEIERLEpwgnfdldlsLLLGFKYVSvFVGTVPEDKLEELKLESDVENVEYISTDKGyvyvvvvVLKELS 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1091 STLLQQLKELQAnkDAVDVACQKHIKEReeLEHYQKLLEENDRVIKDKDDVIQRLQSSYDDLARNQRELlqevsiLTAER 1170
Cdd:PRK05771 191 DEVEEELKKLGF--ERLELEEEGTPSEL--IREIKEELEEIEKERESLLEELKELAKKYLEELLALYEY------LEIEL 260
|
250
....*....|....*
gi 2024359640 1171 DSAQEKDLDLKSTHI 1185
Cdd:PRK05771 261 ERAEALSKFLKTDKT 275
|
|
| CCDC22 |
pfam05667 |
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 ... |
945-1204 |
9.13e-03 |
|
Coiled-coil domain-containing protein 22; Human coiled-coil domain-containing protein 22 (CCDC22) is involved in regulation of NF-kappa-B signalling; the function may involve association with COMMD8 and a CUL1-dependent E3 ubiquitin ligase complex. It is part of the OMMD/CCDC22/CCDC93 (CCC) complex, which interacts with the multisubunit WASH complex required for endosomal deposition of F-actin and cargo trafficking in conjunction with the retromer. This entry also includes CCDC22 homologs from animals and plants.
Pssm-ID: 461708 [Multi-domain] Cd Length: 600 Bit Score: 41.17 E-value: 9.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 945 TQAEELKKQAEQAKSLSSVLASARKEIELMSDKMRDLisekETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELW 1024
Cdd:pfam05667 301 THTEKLQFTNEAPAATSSPPTKVETEEELQQQREEEL----EELQEQLEDLESSIQELEKEIKKLESSIKQVEEELEELK 376
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1025 TKNEELNSENKkiLKQKEAAEAKSRQESTEKvalisekskLLSEIETAQADLLKITQENDALRSSESTLLQQLKELQANK 1104
Cdd:pfam05667 377 EQNEELEKQYK--VKKKTLDLLPDAEENIAK---------LQALVDASAQRLVELAGQWEKHRVPLIEEYRALKEAKSNK 445
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1105 DAvdvACQKHIKEREEL-EHYQKLLEEndrvIKDKDDVIQRLQSSYDDLArnqrellQEVSiltaeRDSAQEKDLDLKST 1183
Cdd:pfam05667 446 ED---ESQRKLEEIKELrEKIKEVAEE----AKQKEELYKQLVAEYERLP-------KDVS-----RSAYTRRILEIVKN 506
|
250 260
....*....|....*....|.
gi 2024359640 1184 HIALKNEIDCLLQTNRSLQSE 1204
Cdd:pfam05667 507 IKKQKEEITKILSDTKSLQKE 527
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
910-1018 |
9.50e-03 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 40.97 E-value: 9.50e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 910 EMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQ-----AEQAKSLSSVLASARKEIELMSDKMRDLISE 984
Cdd:PRK00409 520 ELIASLEELERELEQKAEEAEALLKEAEKLKEELEEKKEKLQEEedkllEEAEKEAQQAIKEAKKEADEIIKELRQLQKG 599
|
90 100 110
....*....|....*....|....*....|....
gi 2024359640 985 KETLAQERNTlkLEKESLLSQHLEMESKILLVQQ 1018
Cdd:PRK00409 600 GYASVKAHEL--IEARKRLNKANEKKEKKKKKQK 631
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
1776-1975 |
9.59e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.58 E-value: 9.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1776 EEELTKSKELLNLENKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEV-TSHQKLEEERSVLNNQLLE 1854
Cdd:COG3883 15 DPQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIaEAEAEIEERREELGERARA 94
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 1855 MKKSLPSNTL---------------RESTLKKEIDEERASLQkSISDTSALITQKDEELEKLRNEITVLRGENASAK-TL 1918
Cdd:COG3883 95 LYRSGGSVSYldvllgsesfsdfldRLSALSKIADADADLLE-ELKADKAELEAKKAELEAKLAELEALKAELEAAKaEL 173
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*..
gi 2024359640 1919 QSVVKTLESDKLKLEEKVKNLEQKLKAKSEQPLTVTSPSGDIAANLLQDESAEDKQQ 1975
Cdd:COG3883 174 EAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAA 230
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
732-1076 |
9.62e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.66 E-value: 9.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 732 KEKFTSAVDGAENAQRAMQETINKLNQKEEQFALMSSELEQLKSNLTVMETKLKEREEREQQLTEAKVKLENDIAEIMKS 811
Cdd:COG4372 30 SEQLRKALFELDKLQEELEQLREELEQAREELEQLEEELEQARSELEQLEEELEELNEQLQAAQAELAQAQEELESLQEE 109
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 812 SGDSSAQLMKMNDELRLKERQLEQIQLELTKANEKAVQLQKNVEQTAQKAEQSQQETLKTHQEELKKMQDQLTDMKKQME 891
Cdd:COG4372 110 AEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKELEEQLESLQEELAALEQELQALSEAEAEQALDELL 189
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 892 TSQNQykdlQAKYEKETSEMITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKSLSSVLASARKEI 971
Cdd:COG4372 190 KEANR----NAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLALSALLDALELEEDKEELLEEVILKEIEELEL 265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2024359640 972 ELMSDKMRDLISEKETLAQERNTLKLEKESLLSQHLEMESKILLVQQDREELWTKNEELNSENKKILKQKEAAEAKSRQE 1051
Cdd:COG4372 266 AILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALSLIGALEDALLAALLELAKKLELALAILLAELADLLQL 345
|
330 340
....*....|....*....|....*
gi 2024359640 1052 STEKVALISEKSKLLSEIETAQADL 1076
Cdd:COG4372 346 LLVGLLDNDVLELLSKGAEAGVADG 370
|
|
| |
