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Conserved domains on  [gi|1720398810|ref|XP_030106383|]
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protein sel-1 homolog 2 isoform X3 [Mus musculus]

Protein Classification

tetratricopeptide repeat protein( domain architecture ID 11434433)

tetratricopeptide repeat (TPR) protein may adopt a right-handed helical structure with an amphipathic channel and may function as an interaction scaffold in the formation of multi-protein complexes

CATH:  1.25.40.10
Gene Ontology:  GO:0005515
PubMed:  10517866|30708253
SCOP:  3001345

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TPR COG0790
TPR repeat [General function prediction only];
116-310 2.27e-45

TPR repeat [General function prediction only];


:

Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 159.32  E-value: 2.27e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810 116 WDIYQYYKFLAERGDVQIQVSLGQLHLIGRkGLDQDYSKALYYFLKAAKAGSANAMAFIGKMYFEGNAAaPQNNATAFKY 195
Cdd:COG0790    48 AAAAAAAAAAAAAGGAEAQYNLGLMYAEGR-GVPKDYEKALEWFEKAAEQGDAEAQYNLGLMYEEGLGV-PQDYAKALEW 125

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810 196 FSMAASKGNAIGLHGLGLLYFHGKGVPVNYGEALKYFQKAAEKGWPNAQFQLGFMYYSGSGVWKDYKLAFKYFYLASQSG 275
Cdd:COG0790   126 YEKAAEQGDADAQYNLGLLYLNGEGVPKDPAKAAEWYRKAAEQGDADAQYNLGVLYENGRGVPKDPAKALEWYRKAAEQG 205

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1720398810 276 QPLAIYYLAEMYATGTGVLRSCRTAVELYKGVCEL 310
Cdd:COG0790   206 DADAQYNLGRLYLNGEGVEKDLEKALRWLRKAAEQ 240
SEL1 smart00671
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
 422-454 4.02e-06

Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.


:

Pssm-ID: 214772 [Multi-domain]  Cd Length: 36  Bit Score: 43.32  E-value: 4.02e-06
                           10        20        30
                   ....*....|....*....|....*....|...
gi 1720398810  422 AQAMFNLAYMYEHGLGIAKDIHLARRLYDMAAQ 454
Cdd:smart00671   1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAE 33
TPR super family cl34042
TPR repeat [General function prediction only];
16-165 8.22e-06

TPR repeat [General function prediction only];


The actual alignment was detected with superfamily member COG0790:

Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 47.23  E-value: 8.22e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810  16 QKALGFLSSYGIGMEYDQAKALIYYTFGSAGGSMMSQMILGYRYLSGINVLQNCEVAlnhykkvadyiadkleksegipv 95
Cdd:COG0790   138 QYNLGLLYLNGEGVPKDPAKAAEWYRKAAEQGDADAQYNLGVLYENGRGVPKDPAKA----------------------- 194

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810  96 ekvrlterpenlssnseildwdiYQYYKFLAERGDVQIQVSLGQLHLIGRkGLDQDYSKALYYFLKAAKA 165
Cdd:COG0790   195 -----------------------LEWYRKAAEQGDADAQYNLGRLYLNGE-GVEKDLEKALRWLRKAAEQ 240
SEL1 smart00671
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
 385-420 2.27e-03

Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.


:

Pssm-ID: 214772 [Multi-domain]  Cd Length: 36  Bit Score: 35.61  E-value: 2.27e-03
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1720398810  385 AFARVKIGDYHYYGYGTKKDYETAATHYSIAADKHH 420
Cdd:smart00671   1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELGN 36
 
Name Accession Description Interval E-value
TPR COG0790
TPR repeat [General function prediction only];
116-310 2.27e-45

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 159.32  E-value: 2.27e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810 116 WDIYQYYKFLAERGDVQIQVSLGQLHLIGRkGLDQDYSKALYYFLKAAKAGSANAMAFIGKMYFEGNAAaPQNNATAFKY 195
Cdd:COG0790    48 AAAAAAAAAAAAAGGAEAQYNLGLMYAEGR-GVPKDYEKALEWFEKAAEQGDAEAQYNLGLMYEEGLGV-PQDYAKALEW 125

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810 196 FSMAASKGNAIGLHGLGLLYFHGKGVPVNYGEALKYFQKAAEKGWPNAQFQLGFMYYSGSGVWKDYKLAFKYFYLASQSG 275
Cdd:COG0790   126 YEKAAEQGDADAQYNLGLLYLNGEGVPKDPAKAAEWYRKAAEQGDADAQYNLGVLYENGRGVPKDPAKALEWYRKAAEQG 205

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1720398810 276 QPLAIYYLAEMYATGTGVLRSCRTAVELYKGVCEL 310
Cdd:COG0790   206 DADAQYNLGRLYLNGEGVEKDLEKALRWLRKAAEQ 240
SEL1 smart00671
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
 241-275 2.39e-06

Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.


Pssm-ID: 214772 [Multi-domain]  Cd Length: 36  Bit Score: 44.09  E-value: 2.39e-06
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 1720398810  241 PNAQFQLGFMYYSGSGVWKDYKLAFKYFYLASQSG 275
Cdd:smart00671   1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELG 35
SEL1 smart00671
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
 422-454 4.02e-06

Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.


Pssm-ID: 214772 [Multi-domain]  Cd Length: 36  Bit Score: 43.32  E-value: 4.02e-06
                           10        20        30
                   ....*....|....*....|....*....|...
gi 1720398810  422 AQAMFNLAYMYEHGLGIAKDIHLARRLYDMAAQ 454
Cdd:smart00671   1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAE 33
TPR COG0790
TPR repeat [General function prediction only];
16-165 8.22e-06

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 47.23  E-value: 8.22e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810  16 QKALGFLSSYGIGMEYDQAKALIYYTFGSAGGSMMSQMILGYRYLSGINVLQNCEVAlnhykkvadyiadkleksegipv 95
Cdd:COG0790   138 QYNLGLLYLNGEGVPKDPAKAAEWYRKAAEQGDADAQYNLGVLYENGRGVPKDPAKA----------------------- 194

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810  96 ekvrlterpenlssnseildwdiYQYYKFLAERGDVQIQVSLGQLHLIGRkGLDQDYSKALYYFLKAAKA 165
Cdd:COG0790   195 -----------------------LEWYRKAAEQGDADAQYNLGRLYLNGE-GVEKDLEKALRWLRKAAEQ 240
Sel1 pfam08238
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
 205-239 8.70e-06

Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.


Pssm-ID: 429881 [Multi-domain]  Cd Length: 35  Bit Score: 42.51  E-value: 8.70e-06
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1720398810 205 AIGLHGLGLLYFHGKGVPVNYGEALKYFQKAAEKG 239
Cdd:pfam08238   1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAELG 35
Sel1 pfam08238
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
 422-454 9.14e-06

Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.


Pssm-ID: 429881 [Multi-domain]  Cd Length: 35  Bit Score: 42.51  E-value: 9.14e-06
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1720398810 422 AQAMFNLAYMYEHGLGIAKDIHLARRLYDMAAQ 454
Cdd:pfam08238   1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAE 33
SEL1 smart00671
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
 385-420 2.27e-03

Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.


Pssm-ID: 214772 [Multi-domain]  Cd Length: 36  Bit Score: 35.61  E-value: 2.27e-03
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1720398810  385 AFARVKIGDYHYYGYGTKKDYETAATHYSIAADKHH 420
Cdd:smart00671   1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELGN 36
 
Name Accession Description Interval E-value
TPR COG0790
TPR repeat [General function prediction only];
116-310 2.27e-45

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 159.32  E-value: 2.27e-45
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810 116 WDIYQYYKFLAERGDVQIQVSLGQLHLIGRkGLDQDYSKALYYFLKAAKAGSANAMAFIGKMYFEGNAAaPQNNATAFKY 195
Cdd:COG0790    48 AAAAAAAAAAAAAGGAEAQYNLGLMYAEGR-GVPKDYEKALEWFEKAAEQGDAEAQYNLGLMYEEGLGV-PQDYAKALEW 125

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810 196 FSMAASKGNAIGLHGLGLLYFHGKGVPVNYGEALKYFQKAAEKGWPNAQFQLGFMYYSGSGVWKDYKLAFKYFYLASQSG 275
Cdd:COG0790   126 YEKAAEQGDADAQYNLGLLYLNGEGVPKDPAKAAEWYRKAAEQGDADAQYNLGVLYENGRGVPKDPAKALEWYRKAAEQG 205

                         170       180       190
                  ....*....|....*....|....*....|....*
gi 1720398810 276 QPLAIYYLAEMYATGTGVLRSCRTAVELYKGVCEL 310
Cdd:COG0790   206 DADAQYNLGRLYLNGEGVEKDLEKALRWLRKAAEQ 240
TPR COG0790
TPR repeat [General function prediction only];
155-454 3.14e-37

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 137.37  E-value: 3.14e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810 155 ALYYFLKAAKAGSANAMAFIGKMYFEGNAAAPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPVNYGEALKYFQK 234
Cdd:COG0790    13 AAAAALAAAAAAAGAAAAAAAAAAAAAALAAAAGAAAAAAAAAAAAAAGGAEAQYNLGLMYAEGRGVPKDYEKALEWFEK 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810 235 AAEKGWPNAQFQLGFMYYSGSGVWKDYKLAFKYFYLASQSGQPLAIYYLAEMYATGTGVLRSCRTAVELYKgvcelghwa 314
Cdd:COG0790    93 AAEQGDAEAQYNLGLMYEEGLGVPQDYAKALEWYEKAAEQGDADAQYNLGLLYLNGEGVPKDPAKAAEWYR--------- 163

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810 315 ekfltayfaykdgdidssliqyallaemgyevaqsnsafileskkakilgkeklypmalllwnRAAIQGNAFARVKIGDY 394
Cdd:COG0790   164 ---------------------------------------------------------------KAAEQGDADAQYNLGVL 180

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810 395 HYYGYGTKKDYETAATHYSIAADKHHsAQAMFNLAYMYEHGLGIAKDIHLARRLYDMAAQ 454
Cdd:COG0790   181 YENGRGVPKDPAKALEWYRKAAEQGD-ADAQYNLGRLYLNGEGVEKDLEKALRWLRKAAE 239
TPR COG0790
TPR repeat [General function prediction only];
150-312 1.28e-36

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 135.83  E-value: 1.28e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810 150 QDYSKALYYFLKAAKAGSANAMAFIGKMYFEGNAAaPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPVNYGEAL 229
Cdd:COG0790    45 AGAAAAAAAAAAAAAAGGAEAQYNLGLMYAEGRGV-PKDYEKALEWFEKAAEQGDAEAQYNLGLMYEEGLGVPQDYAKAL 123

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810 230 KYFQKAAEKGWPNAQFQLGFMYYSGSGVWKDYKLAFKYFYLASQSGQPLAIYYLAEMYATGTGVLRSCRTAVELYKGVCE 309
Cdd:COG0790   124 EWYEKAAEQGDADAQYNLGLLYLNGEGVPKDPAKAAEWYRKAAEQGDADAQYNLGVLYENGRGVPKDPAKALEWYRKAAE 203


                  ...
gi 1720398810 310 LGH 312
Cdd:COG0790   204 QGD 206
TPR COG0790
TPR repeat [General function prediction only];
16-271 1.20e-27

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 111.17  E-value: 1.20e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810  16 QKALGFLSSYGIGMEYDQAKALIYYTFGSAGGSMMSQMILGYRYLSGinvlqncevalnhykkvadyiadkleksegipv 95
Cdd:COG0790    66 QYNLGLMYAEGRGVPKDYEKALEWFEKAAEQGDAEAQYNLGLMYEEG--------------------------------- 112

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810  96 ekvrlterpenlssnseildwdiyqyykflaergdvqiqvslgqlhligrKGLDQDYSKALYYFLKAAKAGSANAMAFIG 175
Cdd:COG0790   113 --------------------------------------------------LGVPQDYAKALEWYEKAAEQGDADAQYNLG 142

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810 176 KMYFEGNaAAPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPVNYGEALKYFQKAAEKGWPNAQFQLGFMYYSGS 255
Cdd:COG0790   143 LLYLNGE-GVPKDPAKAAEWYRKAAEQGDADAQYNLGVLYENGRGVPKDPAKALEWYRKAAEQGDADAQYNLGRLYLNGE 221

                         250
                  ....*....|....*.
gi 1720398810 256 GVWKDYKLAFKYFYLA 271
Cdd:COG0790   222 GVEKDLEKALRWLRKA 237
SEL1 smart00671
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
 241-275 2.39e-06

Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.


Pssm-ID: 214772 [Multi-domain]  Cd Length: 36  Bit Score: 44.09  E-value: 2.39e-06
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 1720398810  241 PNAQFQLGFMYYSGSGVWKDYKLAFKYFYLASQSG 275
Cdd:smart00671   1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELG 35
SEL1 smart00671
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
 422-454 4.02e-06

Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.


Pssm-ID: 214772 [Multi-domain]  Cd Length: 36  Bit Score: 43.32  E-value: 4.02e-06
                           10        20        30
                   ....*....|....*....|....*....|...
gi 1720398810  422 AQAMFNLAYMYEHGLGIAKDIHLARRLYDMAAQ 454
Cdd:smart00671   1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAE 33
TPR COG0790
TPR repeat [General function prediction only];
16-165 8.22e-06

TPR repeat [General function prediction only];


Pssm-ID: 440553 [Multi-domain]  Cd Length: 241  Bit Score: 47.23  E-value: 8.22e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810  16 QKALGFLSSYGIGMEYDQAKALIYYTFGSAGGSMMSQMILGYRYLSGINVLQNCEVAlnhykkvadyiadkleksegipv 95
Cdd:COG0790   138 QYNLGLLYLNGEGVPKDPAKAAEWYRKAAEQGDADAQYNLGVLYENGRGVPKDPAKA----------------------- 194

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720398810  96 ekvrlterpenlssnseildwdiYQYYKFLAERGDVQIQVSLGQLHLIGRkGLDQDYSKALYYFLKAAKA 165
Cdd:COG0790   195 -----------------------LEWYRKAAEQGDADAQYNLGRLYLNGE-GVEKDLEKALRWLRKAAEQ 240
Sel1 pfam08238
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
 205-239 8.70e-06

Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.


Pssm-ID: 429881 [Multi-domain]  Cd Length: 35  Bit Score: 42.51  E-value: 8.70e-06
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1720398810 205 AIGLHGLGLLYFHGKGVPVNYGEALKYFQKAAEKG 239
Cdd:pfam08238   1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAELG 35
Sel1 pfam08238
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
 422-454 9.14e-06

Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.


Pssm-ID: 429881 [Multi-domain]  Cd Length: 35  Bit Score: 42.51  E-value: 9.14e-06
                          10        20        30
                  ....*....|....*....|....*....|...
gi 1720398810 422 AQAMFNLAYMYEHGLGIAKDIHLARRLYDMAAQ 454
Cdd:pfam08238   1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAE 33
SEL1 smart00671
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
 205-239 2.31e-05

Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.


Pssm-ID: 214772 [Multi-domain]  Cd Length: 36  Bit Score: 41.39  E-value: 2.31e-05
                           10        20        30
                   ....*....|....*....|....*....|....*
gi 1720398810  205 AIGLHGLGLLYFHGKGVPVNYGEALKYFQKAAEKG 239
Cdd:smart00671   1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELG 35
SEL1 smart00671
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
 277-312 2.64e-04

Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.


Pssm-ID: 214772 [Multi-domain]  Cd Length: 36  Bit Score: 38.31  E-value: 2.64e-04
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1720398810  277 PLAIYYLAEMYATGTGVLRSCRTAVELYKGVCELGH 312
Cdd:smart00671   1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELGN 36
Sel1 pfam08238
Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.
 241-275 5.83e-04

Sel1 repeat; This short repeat is found in the Sel1 protein. It is related to TPR repeats.


Pssm-ID: 429881 [Multi-domain]  Cd Length: 35  Bit Score: 37.50  E-value: 5.83e-04
                          10        20        30
                  ....*....|....*....|....*....|....*
gi 1720398810 241 PNAQFQLGFMYYSGSGVWKDYKLAFKYFYLASQSG 275
Cdd:pfam08238   1 AEAQYRLGYLYLYGLGVPKDPEKALEWYEKAAELG 35
SEL1 smart00671
Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.
 385-420 2.27e-03

Sel1-like repeats; These represent a subfamily of TPR (tetratricopeptide repeat) sequences.


Pssm-ID: 214772 [Multi-domain]  Cd Length: 36  Bit Score: 35.61  E-value: 2.27e-03
                           10        20        30
                   ....*....|....*....|....*....|....*.
gi 1720398810  385 AFARVKIGDYHYYGYGTKKDYETAATHYSIAADKHH 420
Cdd:smart00671   1 AEAQYNLGQMYEYGLGVPKDLEKALEYYKKAAELGN 36
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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