NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1720409263|ref|XP_030109516|]
View 

nuclear autoantigenic sperm protein isoform X1 [Mus musculus]

Protein Classification

TPR_12 and SHNi-TPR domain-containing protein( domain architecture ID 12139966)

TPR_12 and SHNi-TPR domain-containing protein

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

Name Accession Description Interval E-value
SHNi-TPR pfam10516
SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted ...
528-565 1.98e-08

SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted form of TPR repeat.


:

Pssm-ID: 402238 [Multi-domain]  Cd Length: 38  Bit Score: 50.52  E-value: 1.98e-08
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1720409263 528 AQAHLKLGEVSVESENYIQAVEEFQACLSLQEQYLEAH 565
Cdd:pfam10516   1 ADVYDLLGEISLENENFPQAVTDLRKALELREELLPPE 38
TPR_12 pfam13424
Tetratricopeptide repeat;
526-602 1.27e-07

Tetratricopeptide repeat;


:

Pssm-ID: 315987 [Multi-domain]  Cd Length: 77  Bit Score: 49.31  E-value: 1.27e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720409263 526 YAAQAHLKLGEVSVESENYIQAVEEFQACLSLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFGKSIDVIEK 602
Cdd:pfam13424   1 DVATALNNLAAVLRRLGRYDEALELLEKALEIARRLLGPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
2A1904 super family cl36772
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
250-505 1.80e-04

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


The actual alignment was detected with superfamily member TIGR00927:

Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 44.99  E-value: 1.80e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  250 NKEFRETVEEGE--EIISLEKKPKETSEDQPIRAAEKQGTLMKVVEIEAEIDPQVKSADVGGEEPKDQVATSESELGKAV 327
Cdd:TIGR00927  647 EEGERPTEAEGEngEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGT 726
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  328 LMELSGQDVEASPVVAAEAGAEVSEKPGQEITVIPNNGPVVGQSTV-GDQTPSEPQTSAERLTETK-DGSSVEEVKAELV 405
Cdd:TIGR00927  727 EDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAeGKEDEDEGEIQAGEDGEMKgDEGAEGKVEHEGE 806
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  406 PEQEEAMLPVEESEAAGDGVETKVAQRATEKAPEDKfkiaanEETQERDEQMKEGEETEGSEEEDRENDKAEETPNESvl 485
Cdd:TIGR00927  807 TEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQ------GEAKQDEKGVDGGGGSDGGDSEEEEEEEEEEEEEEE-- 878
                          250       260
                   ....*....|....*....|
gi 1720409263  486 EKKSLQENEEEEIGNLELAW 505
Cdd:TIGR00927  879 EEEEEEEEEEENEEPLSLEW 898
 
Name Accession Description Interval E-value
SHNi-TPR pfam10516
SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted ...
528-565 1.98e-08

SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted form of TPR repeat.


Pssm-ID: 402238 [Multi-domain]  Cd Length: 38  Bit Score: 50.52  E-value: 1.98e-08
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1720409263 528 AQAHLKLGEVSVESENYIQAVEEFQACLSLQEQYLEAH 565
Cdd:pfam10516   1 ADVYDLLGEISLENENFPQAVTDLRKALELREELLPPE 38
TPR_12 pfam13424
Tetratricopeptide repeat;
526-602 1.27e-07

Tetratricopeptide repeat;


Pssm-ID: 315987 [Multi-domain]  Cd Length: 77  Bit Score: 49.31  E-value: 1.27e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720409263 526 YAAQAHLKLGEVSVESENYIQAVEEFQACLSLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFGKSIDVIEK 602
Cdd:pfam13424   1 DVATALNNLAAVLRRLGRYDEALELLEKALEIARRLLGPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
528-598 3.12e-06

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 50.76  E-value: 3.12e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720409263 528 AQAHLKLGEVSVESENYIQAVEEFQACLSLQEQYLEAhdrllaetHYQLGLAYGYNSQYDEAVAQFGKSID 598
Cdd:COG3914   146 AEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEA--------LNNLGNALQDLGRLEEAIAAYRRALE 208
NlpI COG4785
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
489-598 2.59e-05

Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443815 [Multi-domain]  Cd Length: 223  Bit Score: 46.06  E-value: 2.59e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263 489 SLQENEEEEIGNLELAWDMLDLAKIIFKRQETKEAQLYAAQAHLKLGEVSVESENYIQAVEEFQACLSLQEQYleahdrl 568
Cdd:COG4785    34 VLALAIALADLALALAAAALAAAALAAERIDRALALPDLAQLYYERGVAYDSLGDYDLAIADFDQALELDPDL------- 106
                          90       100       110
                  ....*....|....*....|....*....|
gi 1720409263 569 lAETHYQLGLAYGYNSQYDEAVAQFGKSID 598
Cdd:COG4785   107 -AEAYNNRGLAYLLLGDYDAALEDFDRALE 135
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
250-505 1.80e-04

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 44.99  E-value: 1.80e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  250 NKEFRETVEEGE--EIISLEKKPKETSEDQPIRAAEKQGTLMKVVEIEAEIDPQVKSADVGGEEPKDQVATSESELGKAV 327
Cdd:TIGR00927  647 EEGERPTEAEGEngEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGT 726
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  328 LMELSGQDVEASPVVAAEAGAEVSEKPGQEITVIPNNGPVVGQSTV-GDQTPSEPQTSAERLTETK-DGSSVEEVKAELV 405
Cdd:TIGR00927  727 EDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAeGKEDEDEGEIQAGEDGEMKgDEGAEGKVEHEGE 806
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  406 PEQEEAMLPVEESEAAGDGVETKVAQRATEKAPEDKfkiaanEETQERDEQMKEGEETEGSEEEDRENDKAEETPNESvl 485
Cdd:TIGR00927  807 TEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQ------GEAKQDEKGVDGGGGSDGGDSEEEEEEEEEEEEEEE-- 878
                          250       260
                   ....*....|....*....|
gi 1720409263  486 EKKSLQENEEEEIGNLELAW 505
Cdd:TIGR00927  879 EEEEEEEEEEENEEPLSLEW 898
PTZ00121 PTZ00121
MAEBL; Provisional
137-504 8.57e-03

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 39.74  E-value: 8.57e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  137 EEAREELRE--QVYDAMGEKEAKKAEGKSLTKPETDKEQESEVEKGGREDMDISEPEEKLQETVEptSKQLTESSEEAKE 214
Cdd:PTZ00121  1394 DEAKKKAEEdkKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKK--AEEAKKKAEEAKK 1471
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  215 AaipglnedEVASGKTEQESLCTEKGKSISGAYVQNKEFRETVEEGEEIISLEKKPKETSEDQPIRAAEKQGTlmkvveI 294
Cdd:PTZ00121  1472 A--------DEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKA------D 1537
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  295 EAEIDPQVKSADvggeEPKDQVATSESELGKAVLMELSGQDVEASPVVAAEAGAEVSEKPGQEITVIPNNGPVVGQSTVg 374
Cdd:PTZ00121  1538 EAKKAEEKKKAD----ELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEA- 1612
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  375 dQTPSEPQTSAERLtetKDGSSVEEVKAELVPEQEEAMLPVEESEAAGDGVETKVAQRAtEKAPEDKFKiaANEETQERD 454
Cdd:PTZ00121  1613 -KKAEEAKIKAEEL---KKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEA-KKAEEDKKK--AEEAKKAEE 1685
                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|
gi 1720409263  455 EQMKEGEETEGSEEEDRENDKAEETPNESVLEKKSLQENEEEEIGNLELA 504
Cdd:PTZ00121  1686 DEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEA 1735
 
Name Accession Description Interval E-value
SHNi-TPR pfam10516
SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted ...
528-565 1.98e-08

SHNi-TPR; SHNi-TPR family members contain a reiterated sequence motif that is an interrupted form of TPR repeat.


Pssm-ID: 402238 [Multi-domain]  Cd Length: 38  Bit Score: 50.52  E-value: 1.98e-08
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1720409263 528 AQAHLKLGEVSVESENYIQAVEEFQACLSLQEQYLEAH 565
Cdd:pfam10516   1 ADVYDLLGEISLENENFPQAVTDLRKALELREELLPPE 38
TPR_12 pfam13424
Tetratricopeptide repeat;
526-602 1.27e-07

Tetratricopeptide repeat;


Pssm-ID: 315987 [Multi-domain]  Cd Length: 77  Bit Score: 49.31  E-value: 1.27e-07
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1720409263 526 YAAQAHLKLGEVSVESENYIQAVEEFQACLSLQEQYLEAHDRLLAETHYQLGLAYGYNSQYDEAVAQFGKSIDVIEK 602
Cdd:pfam13424   1 DVATALNNLAAVLRRLGRYDEALELLEKALEIARRLLGPDHPLTATTLLNLGRLYLELGRYEEALELLERALALAEK 77
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
528-598 3.12e-06

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 50.76  E-value: 3.12e-06
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720409263 528 AQAHLKLGEVSVESENYIQAVEEFQACLSLQEQYLEAhdrllaetHYQLGLAYGYNSQYDEAVAQFGKSID 598
Cdd:COG3914   146 AEAYLNLGEALRRLGRLEEAIAALRRALELDPDNAEA--------LNNLGNALQDLGRLEEAIAAYRRALE 208
NlpI COG4785
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
528-598 1.78e-05

Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443815 [Multi-domain]  Cd Length: 223  Bit Score: 46.83  E-value: 1.78e-05
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720409263 528 AQAHLKLGEVSVESENYIQAVEEFQACLSLQEQYLEAHDRllaethyqLGLAYGYNSQYDEAVAQFGKSID 598
Cdd:COG4785   107 AEAYNNRGLAYLLLGDYDAALEDFDRALELDPDYAYAYLN--------RGIALYYLGRYELAIADLEKALE 169
NlpI COG4785
Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];
489-598 2.59e-05

Lipoprotein NlpI, contains TPR repeats [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 443815 [Multi-domain]  Cd Length: 223  Bit Score: 46.06  E-value: 2.59e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263 489 SLQENEEEEIGNLELAWDMLDLAKIIFKRQETKEAQLYAAQAHLKLGEVSVESENYIQAVEEFQACLSLQEQYleahdrl 568
Cdd:COG4785    34 VLALAIALADLALALAAAALAAAALAAERIDRALALPDLAQLYYERGVAYDSLGDYDLAIADFDQALELDPDL------- 106
                          90       100       110
                  ....*....|....*....|....*....|
gi 1720409263 569 lAETHYQLGLAYGYNSQYDEAVAQFGKSID 598
Cdd:COG4785   107 -AEAYNNRGLAYLLLGDYDAALEDFDRALE 135
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
250-505 1.80e-04

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 44.99  E-value: 1.80e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  250 NKEFRETVEEGE--EIISLEKKPKETSEDQPIRAAEKQGTLMKVVEIEAEIDPQVKSADVGGEEPKDQVATSESELGKAV 327
Cdd:TIGR00927  647 EEGERPTEAEGEngEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAEEVEHEGETEAEGT 726
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  328 LMELSGQDVEASPVVAAEAGAEVSEKPGQEITVIPNNGPVVGQSTV-GDQTPSEPQTSAERLTETK-DGSSVEEVKAELV 405
Cdd:TIGR00927  727 EDEGEIETGEEGEEVEDEGEGEAEGKHEVETEGDRKETEHEGETEAeGKEDEDEGEIQAGEDGEMKgDEGAEGKVEHEGE 806
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  406 PEQEEAMLPVEESEAAGDGVETKVAQRATEKAPEDKfkiaanEETQERDEQMKEGEETEGSEEEDRENDKAEETPNESvl 485
Cdd:TIGR00927  807 TEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQ------GEAKQDEKGVDGGGGSDGGDSEEEEEEEEEEEEEEE-- 878
                          250       260
                   ....*....|....*....|
gi 1720409263  486 EKKSLQENEEEEIGNLELAW 505
Cdd:TIGR00927  879 EEEEEEEEEEENEEPLSLEW 898
TPR COG0457
Tetratricopeptide (TPR) repeat [General function prediction only];
528-598 1.07e-03

Tetratricopeptide (TPR) repeat [General function prediction only];


Pssm-ID: 440225 [Multi-domain]  Cd Length: 245  Bit Score: 41.53  E-value: 1.07e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1720409263 528 AQAHLKLGEVSVESENYIQAVEEFQACLSLQEQYleahdrllAETHYQLGLAYGYNSQYDEAVAQFGKSID 598
Cdd:COG0457     8 AEAYNNLGLAYRRLGRYEEAIEDYEKALELDPDD--------AEALYNLGLAYLRLGRYEEALADYEQALE 70
Spy COG3914
Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational ...
476-597 1.35e-03

Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443119 [Multi-domain]  Cd Length: 658  Bit Score: 42.29  E-value: 1.35e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263 476 AEETPNESVLEKKSLQENEEEEIGNLELAWDMLDLAKIIFKRQETKEA-QLYA---------AQAHLKLGEVSVESENYI 545
Cdd:COG3914    50 ALAEAAAAALLALAAGEAAAAAAALLLLAALLELAALLLQALGRYEEAlALYRralalnpdnAEALFNLGNLLLALGRLE 129
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1720409263 546 QAVEEFQACLSLQEQYLEAHdrllaethYQLGLAYGYNSQYDEAVAQFGKSI 597
Cdd:COG3914   130 EALAALRRALALNPDFAEAY--------LNLGEALRRLGRLEEAIAALRRAL 173
2A1904 TIGR00927
K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying ...
153-419 2.81e-03

K+-dependent Na+/Ca+ exchanger; [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273344 [Multi-domain]  Cd Length: 1096  Bit Score: 41.13  E-value: 2.81e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  153 EKEAKKAEGKSLTKPETDKEQESEVEKGGREDMDISEPEEKLQETVEPTSKQLTESSEEAKEAA--IPGLNEDEVASGKT 230
Cdd:TIGR00927  649 GERPTEAEGENGEESGGEAEQEGETETKGENESEGEIPAERKGEQEGEGEIEAKEADHKGETEAeeVEHEGETEAEGTED 728
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  231 EQESLCTEKGKSISGAYVQNKEFRETVE-EGEEiislEKKPKETSEDQPIRAAEKQGtlmkvvEIEAEIDPQVKsadvgG 309
Cdd:TIGR00927  729 EGEIETGEEGEEVEDEGEGEAEGKHEVEtEGDR----KETEHEGETEAEGKEDEDEG------EIQAGEDGEMK-----G 793
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  310 EEPKDQVATSESELGKAVLMELSGQDVEASPVVAAEAGAEVSEKPGQEITVIPNNGPVVGQSTVGDQTPSEPQTSAERLT 389
Cdd:TIGR00927  794 DEGAEGKVEHEGETEAGEKDEHEGQSETQADDTEVKDETGEQELNAENQGEAKQDEKGVDGGGGSDGGDSEEEEEEEEEE 873
                          250       260       270
                   ....*....|....*....|....*....|
gi 1720409263  390 ETKDGSSVEEVKAElvpEQEEAMLPVEESE 419
Cdd:TIGR00927  874 EEEEEEEEEEEEEE---EENEEPLSLEWPE 900
NrfG COG4235
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ...
528-614 4.67e-03

Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones];


Pssm-ID: 443378 [Multi-domain]  Cd Length: 131  Bit Score: 38.06  E-value: 4.67e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263 528 AQAHLKLGEVSVESENYIQAVEEFQACLSLQEQYLEAhdrllaetHYQLGLAYGYNSQYDEAVAQFGKSIDVIEK--RMA 605
Cdd:COG4235    51 ADALLDLAEALLAAGDTEEAEELLERALALDPDNPEA--------LYLLGLAAFQQGDYAEAIAAWQKLLALLPAdaPAR 122

                  ....*....
gi 1720409263 606 VLHEQMKEA 614
Cdd:COG4235   123 LLEASIAEA 131
PTZ00121 PTZ00121
MAEBL; Provisional
137-504 8.57e-03

MAEBL; Provisional


Pssm-ID: 173412 [Multi-domain]  Cd Length: 2084  Bit Score: 39.74  E-value: 8.57e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  137 EEAREELRE--QVYDAMGEKEAKKAEGKSLTKPETDKEQESEVEKGGREDMDISEPEEKLQETVEptSKQLTESSEEAKE 214
Cdd:PTZ00121  1394 DEAKKKAEEdkKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKK--AEEAKKKAEEAKK 1471
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  215 AaipglnedEVASGKTEQESLCTEKGKSISGAYVQNKEFRETVEEGEEIISLEKKPKETSEDQPIRAAEKQGTlmkvveI 294
Cdd:PTZ00121  1472 A--------DEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKA------D 1537
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  295 EAEIDPQVKSADvggeEPKDQVATSESELGKAVLMELSGQDVEASPVVAAEAGAEVSEKPGQEITVIPNNGPVVGQSTVg 374
Cdd:PTZ00121  1538 EAKKAEEKKKAD----ELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEA- 1612
                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720409263  375 dQTPSEPQTSAERLtetKDGSSVEEVKAELVPEQEEAMLPVEESEAAGDGVETKVAQRAtEKAPEDKFKiaANEETQERD 454
Cdd:PTZ00121  1613 -KKAEEAKIKAEEL---KKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEA-KKAEEDKKK--AEEAKKAEE 1685
                          330       340       350       360       370
                   ....*....|....*....|....*....|....*....|....*....|
gi 1720409263  455 EQMKEGEETEGSEEEDRENDKAEETPNESVLEKKSLQENEEEEIGNLELA 504
Cdd:PTZ00121  1686 DEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEA 1735
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH