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Conserved domains on  [gi|1720418144|ref|XP_030111303|]
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mRNA-decapping enzyme 1B isoform X5 [Mus musculus]

Protein Classification

mRNA_decap_C domain-containing protein( domain architecture ID 11245340)

mRNA_decap_C domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
mRNA_decap_C pfam16741
mRNA-decapping enzyme C-terminus; The C-terminal domain of mRNA-decapping enzyme in Metazoa is ...
 375-414 2.84e-15

mRNA-decapping enzyme C-terminus; The C-terminal domain of mRNA-decapping enzyme in Metazoa is responsible for trimerization.


:

Pssm-ID: 465253  Cd Length: 43  Bit Score: 69.20  E-value: 2.84e-15
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1720418144 375 SRPLTRLQLQEALLNLIQNDDNFLSIIYEAYLFSVTQAAM 414
Cdd:pfam16741   1 PTPLTKSQLQDALIHLIKNDSDFLNKIHEAYLQSLTKDLS 40
 
Name Accession Description Interval E-value
mRNA_decap_C pfam16741
mRNA-decapping enzyme C-terminus; The C-terminal domain of mRNA-decapping enzyme in Metazoa is ...
 375-414 2.84e-15

mRNA-decapping enzyme C-terminus; The C-terminal domain of mRNA-decapping enzyme in Metazoa is responsible for trimerization.


Pssm-ID: 465253  Cd Length: 43  Bit Score: 69.20  E-value: 2.84e-15
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1720418144 375 SRPLTRLQLQEALLNLIQNDDNFLSIIYEAYLFSVTQAAM 414
Cdd:pfam16741   1 PTPLTKSQLQDALIHLIKNDSDFLNKIHEAYLQSLTKDLS 40
 
Name Accession Description Interval E-value
mRNA_decap_C pfam16741
mRNA-decapping enzyme C-terminus; The C-terminal domain of mRNA-decapping enzyme in Metazoa is ...
 375-414 2.84e-15

mRNA-decapping enzyme C-terminus; The C-terminal domain of mRNA-decapping enzyme in Metazoa is responsible for trimerization.


Pssm-ID: 465253  Cd Length: 43  Bit Score: 69.20  E-value: 2.84e-15
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|
gi 1720418144 375 SRPLTRLQLQEALLNLIQNDDNFLSIIYEAYLFSVTQAAM 414
Cdd:pfam16741   1 PTPLTKSQLQDALIHLIKNDSDFLNKIHEAYLQSLTKDLS 40
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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