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Conserved domains on  [gi|1720418640|ref|XP_030111414|]
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retroelement silencing factor 1 isoform X1 [Mus musculus]

Protein Classification

retroelement silencing factor 1( domain architecture ID 12173327)

retroelement silencing factor 1 (RESF1) is a DUF4617 domain-containing protein that plays a role in the regulation of imprinted gene expression, and regulates repressive epigenetic modifications associated with SETDB1

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF4617 pfam15395
Domain of unknown function (DUF4617); This family of proteins is found in eukaryotes. Proteins ...
 451-1511 0e+00

Domain of unknown function (DUF4617); This family of proteins is found in eukaryotes. Proteins in this family are typically between 702 and 1745 amino acids in length.


:

Pssm-ID: 464702  Cd Length: 1086  Bit Score: 1316.34  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  451 SMELLATCLSLWKNQPSktteenVPKPLEEKQCNTSRISTTVVGSANPTNeVHVKSLCSGVGNSQKMM--SSSQTVLPVL 528
Cdd:pfam15395    1 SMELLATCLSLWKKQPS------ESESTEEKQCNESRTNTTIVGLSKPTN-VCIKSPCSVVGNSQNKLlnSSQETVLPMV 73

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  529 IPSCESSGVAVGKGTELQIAVVSPLVLSDTNTLPGKDSVPEVLPETLYPVVKEGSVCSLQTQPTE----TVALPFDVIGA 604
Cdd:pfam15395   74 VQNHESSGANLTKGTELQIAVVSPLILSDVKTLSVKDITPEALPETVYPVIKEGSICSLQNQLAEnvlvTAALKVDVNEP 153

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  605 VASNNISAEIPLPVDKEKQHKPIQGD----PDIADSS-----LGKHSPLGT-EVLPKPMDSTIVSGPMLQIESICSLAEG 674
Cdd:pfam15395  154 VASSTTSTKIFPLIQKEKQNKSTNGNsegtPNTNQGKhfeleSKDHCPVSDqQVSQKSRDSTVVSSDMLQIDSICSLVEG 233

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  675 DVSYNSQIAEIFNSV---QTEPQKPS-PNQVIDS---QQEQVYDTTENKDFSLQKDKCVQCTDVPHEVPEQPEPLQPEEP 747
Cdd:pfam15395  234 DVSYNSQIAKIFNSVpleQVEPQKPSlPSQQVISdrrQKEQLDNTTENKDLLFQKDESVQCTDVSHEILDQSKSLQPPES 313

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  748 ASSEYVEANREATEESCREYTGRKESTAKDVCLPAAIQQDPHPRETDMFSKSDHSLPAINEINDESEPISYLHDQLSELL 827
Cdd:pfam15395  314 SSLKNVEANRGSEEESKLEHSTKKESTALDVCSSAAIQQDLAPQEIDSLSSYTAQDPTKNEILDDATPILYLHDQLSELL 393

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  828 KEFPYGIETFNRHEVSLDQQKTHKIVENQTGGKTSNVSGDSTDQIKITVLNSEQIKELFPE-DDQPC--DKLAEPENKEI 904
Cdd:pfam15395  394 KEFPYGIEGVNRRNDSVAQQKTNQISKDQTCSKKSCDSKDPTDQIQITILNSEQMKELFPEqDDQPSevDKLAEPQKEKP 473

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  905 VAEVKSPCDSQIPRE-ESHDLGMLDPEKDKIHCCALGWLSMVYEGVPQCHC------SSTEKKEKDQC--LDINSSKQGE 975
Cdd:pfam15395  474 VTEEGSQCDPQAPKEgESPDSVSLDSEKDDIHCCALGWLSMVYEGVPQCQCnsiknsASKEEKGKDQCspLETNSCKQGE 553

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  976 QPCNSGITIfEINPVSNNSKTPLTQATEEGHFSAVHGEktkasktkdnregqelachfsaKCYKKdkkgNFKIRHDTSLK 1055
Cdd:pfam15395  554 NTSDSDAPV-KFNSVSNNPKTPLTPPVEKNHFPEIQGN----------------------KCYKD----TSKTKSNSSLR 606

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1056 MEQKL--KNISSKCDI-PNPSKCNKIAAPEILH-VTTSNSAKNMPFSKQASQESLQKKHTSQDLGPVKAPIELSS--NTD 1129
Cdd:pfam15395  607 TEQKPlpGQLSSKCDKdLDSLQSHKRKEKLQFHeVTFQSSKKMMKFSDQKSQESLQRKHLSQNSGPLKAKTVFLSskNKD 686

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1130 PCRSNTSSVQSVSPEKKKLKFKAGGSRLKYFEKRKTDHVIIPDVEIKKKKYEKQEQNKNAGD-TLKLCSILTESNERASV 1208
Cdd:pfam15395  687 LCRKNSSLVQSVSPEKLKLKFKADGHKQKKLEKRKIDQGEILDGEIKKKKNDKQEQNKNVGPgTFKLCNLLSNPNERASV 766

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1209 QEKTVPSPESSDPKGSSSKSTRVITVQEYLQRQKDKQITGNNASRNICVETVLCDSGHTKTSKHSAAV-SWGKLVEGQSI 1287
Cdd:pfam15395  767 KEKTVSNVKSSDSKDSSSKSNRVITPQEYLQRQKHKEAIGKKASKKTCVENVPCDSEHMKNSKLSMQViSCGKSNEKQGS 846

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1288 SAETAKELEHNSSSHGKDFKIHHSEASRTHSvSNNNKGKFDGKQPDK------MFKNKTSMNNESN--QMPLQVKEQRKQ 1359
Cdd:pfam15395  847 NVQTSKESLNIYLSHGKNLKIHHSEESKTHS-SRNKKGTLDGKQPDKwidktkSDKNLLNINNETErsQLSLQAKEQRKQ 925

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1360 YLNRVAFKCTERESICLTKLDSASKKLSIEK-KSGEYTSKT-----KDTDKPSMLEFKLCPDVLLKNTSTVDKQDCPGPG 1433
Cdd:pfam15395  926 YLNRVAFKCTERESICLTKLDSSPRKLSKESgKSQENKPKTslpvkDTTEKPSMLEFKLCPDILFKNTNTVEEQKDLKNP 1005

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1434 PEkEQAPVQVSGIKSTKEDWLKCIPTRTKMPESSQRDS----ADSRLSKRSLSADEFEILQNPVKESNIMFRTYKKMYLE 1509
Cdd:pfam15395 1006 PR-EQAPVQVSGIKSTKEDWLKCVPTKKKMPEANQEIDdnilANSRLSKRSLSADGFETLQNPVKDSKAMFQTYKKMYLE 1084


                   ..
gi 1720418640 1510 KR 1511
Cdd:pfam15395 1085 KR 1086
 
Name Accession Description Interval E-value
DUF4617 pfam15395
Domain of unknown function (DUF4617); This family of proteins is found in eukaryotes. Proteins ...
 451-1511 0e+00

Domain of unknown function (DUF4617); This family of proteins is found in eukaryotes. Proteins in this family are typically between 702 and 1745 amino acids in length.


Pssm-ID: 464702  Cd Length: 1086  Bit Score: 1316.34  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  451 SMELLATCLSLWKNQPSktteenVPKPLEEKQCNTSRISTTVVGSANPTNeVHVKSLCSGVGNSQKMM--SSSQTVLPVL 528
Cdd:pfam15395    1 SMELLATCLSLWKKQPS------ESESTEEKQCNESRTNTTIVGLSKPTN-VCIKSPCSVVGNSQNKLlnSSQETVLPMV 73

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  529 IPSCESSGVAVGKGTELQIAVVSPLVLSDTNTLPGKDSVPEVLPETLYPVVKEGSVCSLQTQPTE----TVALPFDVIGA 604
Cdd:pfam15395   74 VQNHESSGANLTKGTELQIAVVSPLILSDVKTLSVKDITPEALPETVYPVIKEGSICSLQNQLAEnvlvTAALKVDVNEP 153

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  605 VASNNISAEIPLPVDKEKQHKPIQGD----PDIADSS-----LGKHSPLGT-EVLPKPMDSTIVSGPMLQIESICSLAEG 674
Cdd:pfam15395  154 VASSTTSTKIFPLIQKEKQNKSTNGNsegtPNTNQGKhfeleSKDHCPVSDqQVSQKSRDSTVVSSDMLQIDSICSLVEG 233

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  675 DVSYNSQIAEIFNSV---QTEPQKPS-PNQVIDS---QQEQVYDTTENKDFSLQKDKCVQCTDVPHEVPEQPEPLQPEEP 747
Cdd:pfam15395  234 DVSYNSQIAKIFNSVpleQVEPQKPSlPSQQVISdrrQKEQLDNTTENKDLLFQKDESVQCTDVSHEILDQSKSLQPPES 313

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  748 ASSEYVEANREATEESCREYTGRKESTAKDVCLPAAIQQDPHPRETDMFSKSDHSLPAINEINDESEPISYLHDQLSELL 827
Cdd:pfam15395  314 SSLKNVEANRGSEEESKLEHSTKKESTALDVCSSAAIQQDLAPQEIDSLSSYTAQDPTKNEILDDATPILYLHDQLSELL 393

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  828 KEFPYGIETFNRHEVSLDQQKTHKIVENQTGGKTSNVSGDSTDQIKITVLNSEQIKELFPE-DDQPC--DKLAEPENKEI 904
Cdd:pfam15395  394 KEFPYGIEGVNRRNDSVAQQKTNQISKDQTCSKKSCDSKDPTDQIQITILNSEQMKELFPEqDDQPSevDKLAEPQKEKP 473

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  905 VAEVKSPCDSQIPRE-ESHDLGMLDPEKDKIHCCALGWLSMVYEGVPQCHC------SSTEKKEKDQC--LDINSSKQGE 975
Cdd:pfam15395  474 VTEEGSQCDPQAPKEgESPDSVSLDSEKDDIHCCALGWLSMVYEGVPQCQCnsiknsASKEEKGKDQCspLETNSCKQGE 553

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  976 QPCNSGITIfEINPVSNNSKTPLTQATEEGHFSAVHGEktkasktkdnregqelachfsaKCYKKdkkgNFKIRHDTSLK 1055
Cdd:pfam15395  554 NTSDSDAPV-KFNSVSNNPKTPLTPPVEKNHFPEIQGN----------------------KCYKD----TSKTKSNSSLR 606

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1056 MEQKL--KNISSKCDI-PNPSKCNKIAAPEILH-VTTSNSAKNMPFSKQASQESLQKKHTSQDLGPVKAPIELSS--NTD 1129
Cdd:pfam15395  607 TEQKPlpGQLSSKCDKdLDSLQSHKRKEKLQFHeVTFQSSKKMMKFSDQKSQESLQRKHLSQNSGPLKAKTVFLSskNKD 686

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1130 PCRSNTSSVQSVSPEKKKLKFKAGGSRLKYFEKRKTDHVIIPDVEIKKKKYEKQEQNKNAGD-TLKLCSILTESNERASV 1208
Cdd:pfam15395  687 LCRKNSSLVQSVSPEKLKLKFKADGHKQKKLEKRKIDQGEILDGEIKKKKNDKQEQNKNVGPgTFKLCNLLSNPNERASV 766

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1209 QEKTVPSPESSDPKGSSSKSTRVITVQEYLQRQKDKQITGNNASRNICVETVLCDSGHTKTSKHSAAV-SWGKLVEGQSI 1287
Cdd:pfam15395  767 KEKTVSNVKSSDSKDSSSKSNRVITPQEYLQRQKHKEAIGKKASKKTCVENVPCDSEHMKNSKLSMQViSCGKSNEKQGS 846

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1288 SAETAKELEHNSSSHGKDFKIHHSEASRTHSvSNNNKGKFDGKQPDK------MFKNKTSMNNESN--QMPLQVKEQRKQ 1359
Cdd:pfam15395  847 NVQTSKESLNIYLSHGKNLKIHHSEESKTHS-SRNKKGTLDGKQPDKwidktkSDKNLLNINNETErsQLSLQAKEQRKQ 925

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1360 YLNRVAFKCTERESICLTKLDSASKKLSIEK-KSGEYTSKT-----KDTDKPSMLEFKLCPDVLLKNTSTVDKQDCPGPG 1433
Cdd:pfam15395  926 YLNRVAFKCTERESICLTKLDSSPRKLSKESgKSQENKPKTslpvkDTTEKPSMLEFKLCPDILFKNTNTVEEQKDLKNP 1005

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1434 PEkEQAPVQVSGIKSTKEDWLKCIPTRTKMPESSQRDS----ADSRLSKRSLSADEFEILQNPVKESNIMFRTYKKMYLE 1509
Cdd:pfam15395 1006 PR-EQAPVQVSGIKSTKEDWLKCVPTKKKMPEANQEIDdnilANSRLSKRSLSADGFETLQNPVKDSKAMFQTYKKMYLE 1084


                   ..
gi 1720418640 1510 KR 1511
Cdd:pfam15395 1085 KR 1086
 
Name Accession Description Interval E-value
DUF4617 pfam15395
Domain of unknown function (DUF4617); This family of proteins is found in eukaryotes. Proteins ...
 451-1511 0e+00

Domain of unknown function (DUF4617); This family of proteins is found in eukaryotes. Proteins in this family are typically between 702 and 1745 amino acids in length.


Pssm-ID: 464702  Cd Length: 1086  Bit Score: 1316.34  E-value: 0e+00
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  451 SMELLATCLSLWKNQPSktteenVPKPLEEKQCNTSRISTTVVGSANPTNeVHVKSLCSGVGNSQKMM--SSSQTVLPVL 528
Cdd:pfam15395    1 SMELLATCLSLWKKQPS------ESESTEEKQCNESRTNTTIVGLSKPTN-VCIKSPCSVVGNSQNKLlnSSQETVLPMV 73

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  529 IPSCESSGVAVGKGTELQIAVVSPLVLSDTNTLPGKDSVPEVLPETLYPVVKEGSVCSLQTQPTE----TVALPFDVIGA 604
Cdd:pfam15395   74 VQNHESSGANLTKGTELQIAVVSPLILSDVKTLSVKDITPEALPETVYPVIKEGSICSLQNQLAEnvlvTAALKVDVNEP 153

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  605 VASNNISAEIPLPVDKEKQHKPIQGD----PDIADSS-----LGKHSPLGT-EVLPKPMDSTIVSGPMLQIESICSLAEG 674
Cdd:pfam15395  154 VASSTTSTKIFPLIQKEKQNKSTNGNsegtPNTNQGKhfeleSKDHCPVSDqQVSQKSRDSTVVSSDMLQIDSICSLVEG 233

                          250       260       270       280       290       300       310       320
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  675 DVSYNSQIAEIFNSV---QTEPQKPS-PNQVIDS---QQEQVYDTTENKDFSLQKDKCVQCTDVPHEVPEQPEPLQPEEP 747
Cdd:pfam15395  234 DVSYNSQIAKIFNSVpleQVEPQKPSlPSQQVISdrrQKEQLDNTTENKDLLFQKDESVQCTDVSHEILDQSKSLQPPES 313

                          330       340       350       360       370       380       390       400
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  748 ASSEYVEANREATEESCREYTGRKESTAKDVCLPAAIQQDPHPRETDMFSKSDHSLPAINEINDESEPISYLHDQLSELL 827
Cdd:pfam15395  314 SSLKNVEANRGSEEESKLEHSTKKESTALDVCSSAAIQQDLAPQEIDSLSSYTAQDPTKNEILDDATPILYLHDQLSELL 393

                          410       420       430       440       450       460       470       480
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  828 KEFPYGIETFNRHEVSLDQQKTHKIVENQTGGKTSNVSGDSTDQIKITVLNSEQIKELFPE-DDQPC--DKLAEPENKEI 904
Cdd:pfam15395  394 KEFPYGIEGVNRRNDSVAQQKTNQISKDQTCSKKSCDSKDPTDQIQITILNSEQMKELFPEqDDQPSevDKLAEPQKEKP 473

                          490       500       510       520       530       540       550       560
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  905 VAEVKSPCDSQIPRE-ESHDLGMLDPEKDKIHCCALGWLSMVYEGVPQCHC------SSTEKKEKDQC--LDINSSKQGE 975
Cdd:pfam15395  474 VTEEGSQCDPQAPKEgESPDSVSLDSEKDDIHCCALGWLSMVYEGVPQCQCnsiknsASKEEKGKDQCspLETNSCKQGE 553

                          570       580       590       600       610       620       630       640
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640  976 QPCNSGITIfEINPVSNNSKTPLTQATEEGHFSAVHGEktkasktkdnregqelachfsaKCYKKdkkgNFKIRHDTSLK 1055
Cdd:pfam15395  554 NTSDSDAPV-KFNSVSNNPKTPLTPPVEKNHFPEIQGN----------------------KCYKD----TSKTKSNSSLR 606

                          650       660       670       680       690       700       710       720
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1056 MEQKL--KNISSKCDI-PNPSKCNKIAAPEILH-VTTSNSAKNMPFSKQASQESLQKKHTSQDLGPVKAPIELSS--NTD 1129
Cdd:pfam15395  607 TEQKPlpGQLSSKCDKdLDSLQSHKRKEKLQFHeVTFQSSKKMMKFSDQKSQESLQRKHLSQNSGPLKAKTVFLSskNKD 686

                          730       740       750       760       770       780       790       800
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1130 PCRSNTSSVQSVSPEKKKLKFKAGGSRLKYFEKRKTDHVIIPDVEIKKKKYEKQEQNKNAGD-TLKLCSILTESNERASV 1208
Cdd:pfam15395  687 LCRKNSSLVQSVSPEKLKLKFKADGHKQKKLEKRKIDQGEILDGEIKKKKNDKQEQNKNVGPgTFKLCNLLSNPNERASV 766

                          810       820       830       840       850       860       870       880
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1209 QEKTVPSPESSDPKGSSSKSTRVITVQEYLQRQKDKQITGNNASRNICVETVLCDSGHTKTSKHSAAV-SWGKLVEGQSI 1287
Cdd:pfam15395  767 KEKTVSNVKSSDSKDSSSKSNRVITPQEYLQRQKHKEAIGKKASKKTCVENVPCDSEHMKNSKLSMQViSCGKSNEKQGS 846

                          890       900       910       920       930       940       950       960
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1288 SAETAKELEHNSSSHGKDFKIHHSEASRTHSvSNNNKGKFDGKQPDK------MFKNKTSMNNESN--QMPLQVKEQRKQ 1359
Cdd:pfam15395  847 NVQTSKESLNIYLSHGKNLKIHHSEESKTHS-SRNKKGTLDGKQPDKwidktkSDKNLLNINNETErsQLSLQAKEQRKQ 925

                          970       980       990      1000      1010      1020      1030      1040
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1360 YLNRVAFKCTERESICLTKLDSASKKLSIEK-KSGEYTSKT-----KDTDKPSMLEFKLCPDVLLKNTSTVDKQDCPGPG 1433
Cdd:pfam15395  926 YLNRVAFKCTERESICLTKLDSSPRKLSKESgKSQENKPKTslpvkDTTEKPSMLEFKLCPDILFKNTNTVEEQKDLKNP 1005

                         1050      1060      1070      1080      1090      1100      1110      1120
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720418640 1434 PEkEQAPVQVSGIKSTKEDWLKCIPTRTKMPESSQRDS----ADSRLSKRSLSADEFEILQNPVKESNIMFRTYKKMYLE 1509
Cdd:pfam15395 1006 PR-EQAPVQVSGIKSTKEDWLKCVPTKKKMPEANQEIDdnilANSRLSKRSLSADGFETLQNPVKDSKAMFQTYKKMYLE 1084


                   ..
gi 1720418640 1510 KR 1511
Cdd:pfam15395 1085 KR 1086
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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