NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1907173261|ref|XP_036008149|]
View 

uncharacterized protein CFAP92 isoform X1 [Mus musculus]

Protein Classification

DUF4550 domain-containing protein( domain architecture ID 10633411)

DUF4550 domain-containing protein similar to Homo sapiens protein KIAA1257

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF4550 pfam15084
Domain of unknown function (DUF4550); This presumed domain is functionally uncharacterized. ...
 109-203 2.08e-52

Domain of unknown function (DUF4550); This presumed domain is functionally uncharacterized. This domain family is found in eukaryotes, and is approximately 100 amino acids in length. This domain contains an N-terminal HXE motif.


:

Pssm-ID: 464493  Cd Length: 95  Bit Score: 178.35  E-value: 2.08e-52
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907173261  109 QFYHIEYFFLPDDIEPKIVDIVVFPNVAKVFLESGTKTVKPWRDDDKVWVSWSQTFHVNVTKELLKKLNFHKITLRLWDT 188
Cdd:pfam15084    1 RYYHIEYVLLPDDEEPTKVDVVVFGNVAKIFTESESKTVKPWREGDLLWVSWTHTHNLNVTKELLLKLYSHKITLKIWDT 80

                           90
                   ....*....|....*
gi 1907173261  189 KDRVSKRARYQRVKA 203
Cdd:pfam15084   81 KDKVSSRARFDRPKA 95
 
Name Accession Description Interval E-value
DUF4550 pfam15084
Domain of unknown function (DUF4550); This presumed domain is functionally uncharacterized. ...
 109-203 2.08e-52

Domain of unknown function (DUF4550); This presumed domain is functionally uncharacterized. This domain family is found in eukaryotes, and is approximately 100 amino acids in length. This domain contains an N-terminal HXE motif.


Pssm-ID: 464493  Cd Length: 95  Bit Score: 178.35  E-value: 2.08e-52
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907173261  109 QFYHIEYFFLPDDIEPKIVDIVVFPNVAKVFLESGTKTVKPWRDDDKVWVSWSQTFHVNVTKELLKKLNFHKITLRLWDT 188
Cdd:pfam15084    1 RYYHIEYVLLPDDEEPTKVDVVVFGNVAKIFTESESKTVKPWREGDLLWVSWTHTHNLNVTKELLLKLYSHKITLKIWDT 80

                           90
                   ....*....|....*
gi 1907173261  189 KDRVSKRARYQRVKA 203
Cdd:pfam15084   81 KDKVSSRARFDRPKA 95
 
Name Accession Description Interval E-value
DUF4550 pfam15084
Domain of unknown function (DUF4550); This presumed domain is functionally uncharacterized. ...
 109-203 2.08e-52

Domain of unknown function (DUF4550); This presumed domain is functionally uncharacterized. This domain family is found in eukaryotes, and is approximately 100 amino acids in length. This domain contains an N-terminal HXE motif.


Pssm-ID: 464493  Cd Length: 95  Bit Score: 178.35  E-value: 2.08e-52
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907173261  109 QFYHIEYFFLPDDIEPKIVDIVVFPNVAKVFLESGTKTVKPWRDDDKVWVSWSQTFHVNVTKELLKKLNFHKITLRLWDT 188
Cdd:pfam15084    1 RYYHIEYVLLPDDEEPTKVDVVVFGNVAKIFTESESKTVKPWREGDLLWVSWTHTHNLNVTKELLLKLYSHKITLKIWDT 80

                           90
                   ....*....|....*
gi 1907173261  189 KDRVSKRARYQRVKA 203
Cdd:pfam15084   81 KDKVSSRARFDRPKA 95
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH