NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1907070019|ref|XP_036008980|]
View 

SPATS2-like protein isoform X4 [Mus musculus]

Protein Classification

DUF1387 domain-containing protein( domain architecture ID 12073490)

DUF1387 domain-containing protein similar to Homo sapiens spermatogenesis-associated serine-rich protein 2 (SPATS2) that may play an important role in development of testicular germ cells

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF1387 pfam07139
Protein of unknown function (DUF1387); This family represents a conserved region approximately ...
 59-368 1.31e-135

Protein of unknown function (DUF1387); This family represents a conserved region approximately 300 residues long within a number of hypothetical proteins of unknown function that seem to be restricted to mammals.


:

Pssm-ID: 462100  Cd Length: 311  Bit Score: 396.42  E-value: 1.31e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070019  59 WNMTGKKKNNKRKRSKSKQHQGNKDAKDKVERPEVGPLQPQAplVQNGHMNGCEKDSSSPDSTREKLALTPREKKISILE 138
Cdd:pfam07139   1 WNVTGKKKNPKKKKKKKKQTEENKEAVPSERGGENGYHVNGG--INNDHENGCSFDTESVDSLSEILDSESTEAAALGGP 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070019 139 EPPRAQRGVTEGgRLLQQKMSLDGNPRAIHGpSERSDGPQWSAGQP-CNPSKPKAKTSPVKSNAPAAhLEIKPDEL---- 213
Cdd:pfam07139  79 ESSSSRLANGIS-DLEDPKCSADAEPQAVSH-SAPSPASQNAGRPLsRNASKPKSRPSSNKSLLEDA-PLSSTDDKlgss 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070019 214 -AKKRGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSSVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMDILTARQKK 292
Cdd:pfam07139 156 iEKKVGPNIEKSVKDLQRCTVSLTRYRVVIKEEMDASIKKIKATFAELQSCLMDREVALLAEMDKVKAEAMEILTARQKK 235

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070019 293 AEELKRLTDLASQMAEMQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQILICGEITHPKNSYSSRTPCS 368
Cdd:pfam07139 236 AEELKRLTDLAVQMSEEQLVELRADIKHFVSERKYDEELGRAARFTCDLEQLKTSIPKFGEVSHPKNNYSNRVRCS 311
 
Name Accession Description Interval E-value
DUF1387 pfam07139
Protein of unknown function (DUF1387); This family represents a conserved region approximately ...
 59-368 1.31e-135

Protein of unknown function (DUF1387); This family represents a conserved region approximately 300 residues long within a number of hypothetical proteins of unknown function that seem to be restricted to mammals.


Pssm-ID: 462100  Cd Length: 311  Bit Score: 396.42  E-value: 1.31e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070019  59 WNMTGKKKNNKRKRSKSKQHQGNKDAKDKVERPEVGPLQPQAplVQNGHMNGCEKDSSSPDSTREKLALTPREKKISILE 138
Cdd:pfam07139   1 WNVTGKKKNPKKKKKKKKQTEENKEAVPSERGGENGYHVNGG--INNDHENGCSFDTESVDSLSEILDSESTEAAALGGP 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070019 139 EPPRAQRGVTEGgRLLQQKMSLDGNPRAIHGpSERSDGPQWSAGQP-CNPSKPKAKTSPVKSNAPAAhLEIKPDEL---- 213
Cdd:pfam07139  79 ESSSSRLANGIS-DLEDPKCSADAEPQAVSH-SAPSPASQNAGRPLsRNASKPKSRPSSNKSLLEDA-PLSSTDDKlgss 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070019 214 -AKKRGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSSVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMDILTARQKK 292
Cdd:pfam07139 156 iEKKVGPNIEKSVKDLQRCTVSLTRYRVVIKEEMDASIKKIKATFAELQSCLMDREVALLAEMDKVKAEAMEILTARQKK 235

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070019 293 AEELKRLTDLASQMAEMQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQILICGEITHPKNSYSSRTPCS 368
Cdd:pfam07139 236 AEELKRLTDLAVQMSEEQLVELRADIKHFVSERKYDEELGRAARFTCDLEQLKTSIPKFGEVSHPKNNYSNRVRCS 311
 
Name Accession Description Interval E-value
DUF1387 pfam07139
Protein of unknown function (DUF1387); This family represents a conserved region approximately ...
 59-368 1.31e-135

Protein of unknown function (DUF1387); This family represents a conserved region approximately 300 residues long within a number of hypothetical proteins of unknown function that seem to be restricted to mammals.


Pssm-ID: 462100  Cd Length: 311  Bit Score: 396.42  E-value: 1.31e-135
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070019  59 WNMTGKKKNNKRKRSKSKQHQGNKDAKDKVERPEVGPLQPQAplVQNGHMNGCEKDSSSPDSTREKLALTPREKKISILE 138
Cdd:pfam07139   1 WNVTGKKKNPKKKKKKKKQTEENKEAVPSERGGENGYHVNGG--INNDHENGCSFDTESVDSLSEILDSESTEAAALGGP 78

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070019 139 EPPRAQRGVTEGgRLLQQKMSLDGNPRAIHGpSERSDGPQWSAGQP-CNPSKPKAKTSPVKSNAPAAhLEIKPDEL---- 213
Cdd:pfam07139  79 ESSSSRLANGIS-DLEDPKCSADAEPQAVSH-SAPSPASQNAGRPLsRNASKPKSRPSSNKSLLEDA-PLSSTDDKlgss 155

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907070019 214 -AKKRGPNIEKSVKDLQRCTVSLTRYRVMIKEEVDSSVKKIKAAFAELHNCIIDKEVSLMAEMDKVKEEAMDILTARQKK 292
Cdd:pfam07139 156 iEKKVGPNIEKSVKDLQRCTVSLTRYRVVIKEEMDASIKKIKATFAELQSCLMDREVALLAEMDKVKAEAMEILTARQKK 235

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907070019 293 AEELKRLTDLASQMAEMQLAELRAEIKHFVSERKYDEELGKAARFSCDIEQLKAQILICGEITHPKNSYSSRTPCS 368
Cdd:pfam07139 236 AEELKRLTDLAVQMSEEQLVELRADIKHFVSERKYDEELGRAARFTCDLEQLKTSIPKFGEVSHPKNNYSNRVRCS 311
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH