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Conserved domains on  [gi|1907082940|ref|XP_036012843|]
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UPF0450 protein C17orf58 homolog isoform X9 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
NTR_like super family cl02512
NTR_like domain; a beta barrel with an oligosaccharide/oligonucleotide-binding fold found in ...
 136-317 9.13e-18

NTR_like domain; a beta barrel with an oligosaccharide/oligonucleotide-binding fold found in netrins, complement proteins, tissue inhibitors of metalloproteases (TIMP), and procollagen C-proteinase enhancers (PCOLCE), amongst others. In netrins, the domain plays a role in controlling axon branching in neural development, while the common function of these modules in TIMPs appears to be binding to metzincins. A subset of this family is also known as the C345C domain because it occurs as a C-terminal domain in complement C3, C4 and C5. In C5, the domain interacts with various partners during the formation of the membrane attack complex.


The actual alignment was detected with superfamily member cd03576:

Pssm-ID: 470599  Cd Length: 124  Bit Score: 78.20  E-value: 9.13e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940 136 PETQSCARACSADADEWEAYCASEFAaVNGIVHDVDVLGAGMRLVTLLvdpDGLYKMSRLYITPDGFFFRVHILALDsss 215
Cdd:cd03576     1 PTAALCQQKCRRTGTLESNYCSSEFV-ITGTVISMTRGPGSLHATVSI---IKLYKEGRLAITQAGKTMSVKITVVC--- 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940 216 chKPCPEFKpgieipspekaihrvlynatgdlsaaaqlllvtpapnslfkdqalsrashtPGSRYIVMGHIYH-KRRQLP 294
Cdd:cd03576    74 --KQCPLLR---------------------------------------------------RGLNYILMGQVDEeGRGVIP 100

                         170       180
                  ....*....|....*....|...
gi 1907082940 295 SAllQVLRGRLRPGDGLIRGSSS 317
Cdd:cd03576   101 PE--SFVMLYKTKHQKLLAALSN 121
PHA03247 super family cl33720
large tegument protein UL36; Provisional
 2-131 2.10e-06

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 49.55  E-value: 2.10e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940    2 VTQASNAPPPHRKPDSRETPGPRAQPLPEFSRRPRAAYAGPRAWPDPRRRKTA---PPADNRAGFRDAVHAPAALPGPR- 77
Cdd:PHA03247  2695 LTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGpatPGGPARPARPPTTAGPPAPAPPAa 2774

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1907082940   78 -LAQAENRASPPEDSPRRALSRAVRPPGARAASPAHPNRPRAAAQPSGTPQALSP 131
Cdd:PHA03247  2775 pAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLP 2829
 
Name Accession Description Interval E-value
NTR_PCOLCE cd03576
NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are ...
 136-317 9.13e-18

NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which have been suggested to possess inhibitory functions towards specific serine proteases but not towards metzincins, which are inhibited by the related TIMPs.


Pssm-ID: 239631  Cd Length: 124  Bit Score: 78.20  E-value: 9.13e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940 136 PETQSCARACSADADEWEAYCASEFAaVNGIVHDVDVLGAGMRLVTLLvdpDGLYKMSRLYITPDGFFFRVHILALDsss 215
Cdd:cd03576     1 PTAALCQQKCRRTGTLESNYCSSEFV-ITGTVISMTRGPGSLHATVSI---IKLYKEGRLAITQAGKTMSVKITVVC--- 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940 216 chKPCPEFKpgieipspekaihrvlynatgdlsaaaqlllvtpapnslfkdqalsrashtPGSRYIVMGHIYH-KRRQLP 294
Cdd:cd03576    74 --KQCPLLR---------------------------------------------------RGLNYILMGQVDEeGRGVIP 100

                         170       180
                  ....*....|....*....|...
gi 1907082940 295 SAllQVLRGRLRPGDGLIRGSSS 317
Cdd:cd03576   101 PE--SFVMLYKTKHQKLLAALSN 121
PHA03247 PHA03247
large tegument protein UL36; Provisional
 2-131 2.10e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 49.55  E-value: 2.10e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940    2 VTQASNAPPPHRKPDSRETPGPRAQPLPEFSRRPRAAYAGPRAWPDPRRRKTA---PPADNRAGFRDAVHAPAALPGPR- 77
Cdd:PHA03247  2695 LTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGpatPGGPARPARPPTTAGPPAPAPPAa 2774

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1907082940   78 -LAQAENRASPPEDSPRRALSRAVRPPGARAASPAHPNRPRAAAQPSGTPQALSP 131
Cdd:PHA03247  2775 pAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLP 2829
 
Name Accession Description Interval E-value
NTR_PCOLCE cd03576
NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are ...
 136-317 9.13e-18

NTR domain, PCOLCE subfamily; Procollagen C-endopeptidase enhancers (PCOLCEs) are extracellular matrix proteins that enhance the activity of procollagen C-proteases, by binding to the procollagen I C-peptide. They contain a C-terminal NTR domain, which have been suggested to possess inhibitory functions towards specific serine proteases but not towards metzincins, which are inhibited by the related TIMPs.


Pssm-ID: 239631  Cd Length: 124  Bit Score: 78.20  E-value: 9.13e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940 136 PETQSCARACSADADEWEAYCASEFAaVNGIVHDVDVLGAGMRLVTLLvdpDGLYKMSRLYITPDGFFFRVHILALDsss 215
Cdd:cd03576     1 PTAALCQQKCRRTGTLESNYCSSEFV-ITGTVISMTRGPGSLHATVSI---IKLYKEGRLAITQAGKTMSVKITVVC--- 73

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940 216 chKPCPEFKpgieipspekaihrvlynatgdlsaaaqlllvtpapnslfkdqalsrashtPGSRYIVMGHIYH-KRRQLP 294
Cdd:cd03576    74 --KQCPLLR---------------------------------------------------RGLNYILMGQVDEeGRGVIP 100

                         170       180
                  ....*....|....*....|...
gi 1907082940 295 SAllQVLRGRLRPGDGLIRGSSS 317
Cdd:cd03576   101 PE--SFVMLYKTKHQKLLAALSN 121
PHA03247 PHA03247
large tegument protein UL36; Provisional
 2-131 2.10e-06

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 49.55  E-value: 2.10e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940    2 VTQASNAPPPHRKPDSRETPGPRAQPLPEFSRRPRAAYAGPRAWPDPRRRKTA---PPADNRAGFRDAVHAPAALPGPR- 77
Cdd:PHA03247  2695 LTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGpatPGGPARPARPPTTAGPPAPAPPAa 2774

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*
gi 1907082940   78 -LAQAENRASPPEDSPRRALSRAVRPPGARAASPAHPNRPRAAAQPSGTPQALSP 131
Cdd:PHA03247  2775 pAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLP 2829
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
35-153 7.81e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 47.56  E-value: 7.81e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940  35 PRAAYAGPRAWPDPRRR--KTAPPADNRAGFRDAVHAPAALPGPRLAQAENRASPPEDSPRRALSRAVRPPGARAASPAH 112
Cdd:PRK12323  374 PATAAAAPVAQPAPAAAapAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPA 453

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1907082940 113 P------NRPRAAAQPSGTPQALSPEDREPETQSCARACSADADEWE 153
Cdd:PRK12323  454 PaaapaaAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWE 500
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
5-162 9.72e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 44.07  E-value: 9.72e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940   5 ASNAPPPHRKPDSRETPGPRAQPLPEFSRRPRAA--YAGPRAWPDPR--------RRKTAPPADNRAGFRDAVHAPAALP 74
Cdd:PRK07003  367 APGGGVPARVAGAVPAPGARAAAAVGASAVPAVTavTGAAGAALAPKaaaaaaatRAEAPPAAPAPPATADRGDDAADGD 446

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940  75 GPRLAQAENRASPPEDSPRRALSRAVRPPGARAASPAHPNRPRAAAQPSGTPQALSPEDREPETQSCARACSADADEWEA 154
Cdd:PRK07003  447 APVPAKANARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAA 526


                  ....*...
gi 1907082940 155 YCASEFAA 162
Cdd:PRK07003  527 PPAPEARP 534
PHA03247 PHA03247
large tegument protein UL36; Provisional
 3-149 1.66e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.77  E-value: 1.66e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940    3 TQASNAPPP----------HRKPDSRETPGPRAQPLPEfSRRPRAAYAGPRAWPDPRRRKTAPPADNRA---GFRDAVHA 69
Cdd:PHA03247  2611 PAPPSPLPPdthapdppppSPSPAANEPDPHPPPTVPP-PERPRDDPAPGRVSRPRRARRLGRAAQASSppqRPRRRAAR 2689

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940   70 PAALPGPRLAQAENRASPPEDSPRRALSRAVRPPG---ARAASPAHPNRPRAAAQPSG--TPQALSPEDREPETQSCARA 144
Cdd:PHA03247  2690 PTVGSLTSLADPPPPPPTPEPAPHALVSATPLPPGpaaARQASPALPAAPAPPAVPAGpaTPGGPARPARPPTTAGPPAP 2769


                   ....*
gi 1907082940  145 CSADA 149
Cdd:PHA03247  2770 APPAA 2774
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
5-138 1.72e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 43.33  E-value: 1.72e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940   5 ASNAPPPHRKPDSRETPGPRAQPLPEFSRRPRAAYAGPRAWPDPRRRKTAPPADNRAGFRDAVHAPAALPGPRLAQAENR 84
Cdd:PRK12323  375 ATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAP 454

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1907082940  85 ASPPEDSPRRALSRAVRPPGARAASPAhpnRPRAAAQPSGTPQALSPEDREPET 138
Cdd:PRK12323  455 AAAPAAAARPAAAGPRPVAAAAAAAPA---RAAPAAAPAPADDDPPPWEELPPE 505
PHA03247 PHA03247
large tegument protein UL36; Provisional
 9-124 1.82e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.39  E-value: 1.82e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940    9 PPPHRKPDSRETPGPRAQPLPEFSRRP--RAAYAGPRAWPDPRRRKTAPPADNRAGFRDAVhAPAALPGPRLAQAENRAS 86
Cdd:PHA03247  2840 PPPPGPPPPSLPLGGSVAPGGDVRRRPpsRSPAAKPAAPARPPVRRLARPAVSRSTESFAL-PPDQPERPPQPQAPPPPQ 2918

                           90       100       110
                   ....*....|....*....|....*....|....*....
gi 1907082940   87 PPEDSPRRALSRAVRPPGARAASPAHPN-RPRAAAQPSG 124
Cdd:PHA03247  2919 PQPQPPPPPQPQPPPPPPPRPQPPLAPTtDPAGAGEPSG 2957
PHA03247 PHA03247
large tegument protein UL36; Provisional
 4-139 2.29e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 43.39  E-value: 2.29e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940    4 QASNAPPPHRKPDSRETPGPRAQPLPEFSRRPRAAYAGPRAWpDPRRRKTAPPADNRAGFRDAVHAPAALPGPRLAQAEN 83
Cdd:PHA03247  2761 PTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPW-DPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAP 2839

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907082940   84 RASPPEDSPRRALSRAVRP---------PGARAASPAHPNRPRA------AAQPSGTPQALSPEDREPETQ 139
Cdd:PHA03247  2840 PPPPGPPPPSLPLGGSVAPggdvrrrppSRSPAAKPAAPARPPVrrlarpAVSRSTESFALPPDQPERPPQ 2910
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 4-154 3.18e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 42.67  E-value: 3.18e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940   4 QASNAPPPHRKPDSRETPGPRAQPLPEFSRRPRAAYAGPRAWPDPRRRKTAPPADNRAGfRDAVHAPAALPGPRLAQAEN 83
Cdd:PRK07764  616 AAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAG-GAAPAAPPPAPAPAAPAAPA 694

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907082940  84 RASPPEDSPRRALSRAVRPPGARAASPAHPNRPRAAAQPSGTPQALSPEDREPETQSCARACSADADEWEA 154
Cdd:PRK07764  695 GAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPA 765
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 3-154 3.42e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 42.28  E-value: 3.42e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940   3 TQASNAPPPHRKPDSRETPGPRAQPLPEFSRRPRAAYAGPRAWPDPrrrkTAPPADNRAGFRDAVHAPAALPGPRLAQAE 82
Cdd:PRK07764  642 APAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAP----AAPAAPAGAAPAQPAPAPAATPPAGQADDP 717

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907082940  83 NRASPP----EDSPRRALSRAVRPPGARAASPAHPNRPRAAAQPSGTPQALSPEDREPETQSCARACSADADEWEA 154
Cdd:PRK07764  718 AAQPPQaaqgASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMAEDDAPSM 793
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 4-149 3.63e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 42.28  E-value: 3.63e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940   4 QASNAPPPHRKPDSRETPGPRAQPlpefsrRPRAAYAGPRAWPDPRRRKTAPPADNRAgfrdAVHAPAALPGPRLAQAEN 83
Cdd:PRK07764  604 ASSGPPEEAARPAAPAAPAAPAAP------APAGAAAAPAEASAAPAPGVAAPEHHPK----HVAVPDASDGGDGWPAKA 673

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907082940  84 RASPPEDSPRRALSRAVRPPGARAASPAHPnRPRAAAQPSGTPQALSPEDREPETQSCARACSADA 149
Cdd:PRK07764  674 GGAAPAAPPPAPAPAAPAAPAGAAPAQPAP-APAATPPAGQADDPAAQPPQAAQGASAPSPAADDP 738
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
1-165 5.10e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 41.79  E-value: 5.10e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940   1 MVTQASNAPPPHRKPDSRETPGPRAQPLPEFSRRPRAAYAGPRAWPDPRRRKTAPPADNRAGFRDAV----HAPAALPGP 76
Cdd:PRK12323  430 PEALAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAAPAAAPAPADDDPppweELPPEFASP 509

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940  77 RLAQAEN--RASPPEDSPRRALSRAVRPPGARAASPAHPNRPRAAAQPSGTPQALSPEdrepetQSCARACSADADEWEA 154
Cdd:PRK12323  510 APAQPDAapAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPR------ASASGLPDMFDGDWPA 583

                         170       180
                  ....*....|....*....|....*
gi 1907082940 155 YCA--------------SEFAAVNG 165
Cdd:PRK12323  584 LAArlpvrglaqqlarqSELAGVEG 608
PHA03247 PHA03247
large tegument protein UL36; Provisional
 10-146 6.32e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.85  E-value: 6.32e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940   10 PPHRKPDSRETPgPRAQPLPEFSRRPRAAYAGPRAWPDPRRRKTA-----PPADNRAGFRDAVHAPAALPGPRLAQAENR 84
Cdd:PHA03247  2577 PSEPAVTSRARR-PDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDthapdPPPPSPSPAANEPDPHPPPTVPPPERPRDD 2655

                           90       100       110       120       130       140
                   ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907082940   85 ASPPEDSPRRALSRAVRPPgaRAASPAHPNRPRAAAQPSGTPQALS-PEDREPETQSCARACS 146
Cdd:PHA03247  2656 PAPGRVSRPRRARRLGRAA--QASSPPQRPRRRAARPTVGSLTSLAdPPPPPPTPEPAPHALV 2716
PHA03247 PHA03247
large tegument protein UL36; Provisional
 3-131 6.49e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.85  E-value: 6.49e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940    3 TQASNAPPPHRKPDSRETPGPRAQPLPEfSRRPRAAYAGPRAWPD------------------PRRRKTAPPADNRAGFR 64
Cdd:PHA03247  2621 THAPDPPPPSPSPAANEPDPHPPPTVPP-PERPRDDPAPGRVSRPrrarrlgraaqassppqrPRRRAARPTVGSLTSLA 2699

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940   65 D--------------AVHAPAALPGPRLAQAENRASPPEDSPRRALSRAVRPPG----ARAASPAHPNRPRAAAQPSGTP 126
Cdd:PHA03247  2700 DpppppptpepaphaLVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGparpARPPTTAGPPAPAPPAAPAAGP 2779


                   ....*
gi 1907082940  127 QALSP 131
Cdd:PHA03247  2780 PRRLT 2784
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 2-137 7.37e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.51  E-value: 7.37e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940   2 VTQASNAPPPHRKPDSRETPG-PRAQPLPEFSRRPRAAYAGPRAWPDPRRRKTAPPADNRAGFRDAVHAPAALPGPRLAQ 80
Cdd:PRK07764  393 APAAAAPSAAAAAPAAAPAPAaAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAPSPPPAAAPSAQPAPAPAA 472

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1907082940  81 AENRASPPEDSprralsravrpPGARAASPAHPNRPRAAAQPSGTPQALSPEDREPE 137
Cdd:PRK07764  473 APEPTAAPAPA-----------PPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPE 518
PHA03247 PHA03247
large tegument protein UL36; Provisional
 6-123 1.15e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 41.08  E-value: 1.15e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940    6 SNAPPPHRKPDSRETPGPRAQPLPEFSRRPRAAYAGPRAwpdprRRKTAPPADNRAgfrdavHAPAALPGPRLAQAENRA 85
Cdd:PHA03247  2548 AGDPPPPLPPAAPPAAPDRSVPPPRPAPRPSEPAVTSRA-----RRPDAPPQSARP------RAPVDDRGDPRGPAPPSP 2616

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|...
gi 1907082940   86 SPPEDSPRR-----ALSRAVRPPGARAASPAHPNRPRAAAQPS 123
Cdd:PHA03247  2617 LPPDTHAPDppppsPSPAANEPDPHPPPTVPPPERPRDDPAPG 2659
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 25-144 1.18e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 40.74  E-value: 1.18e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940  25 AQPLPEFSRRPRAAYAGPRAWPDPRRRKTAPPADNRAGFRDAVHAPAALPGPRLAQAENRASPPEDSPRRALSRAVRPPG 104
Cdd:PRK07764  375 LARLERLERRLGVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAP 454

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1907082940 105 ARAASPAHPNRPRAAAQPSGTPQALSPEDREPETQSCARA 144
Cdd:PRK07764  455 SPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAP 494
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
2-150 1.20e-03

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 40.63  E-value: 1.20e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940   2 VTQASNAPPPHRKPDSRETPGPRAQPLPEFSRRPRAAYAGPRAWPDPRRRKTAPPADNRAGFRDAVHAPAALPGPRLAQA 81
Cdd:PRK12323  390 AAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGP 469

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907082940  82 ENRASPPEDSPRRAlSRAVRPPGARAASPAHPNRPRAAAQPSGTPQALSPEDREPETQSCARACSADAD 150
Cdd:PRK12323  470 RPVAAAAAAAPARA-APAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDA 537
PHA03378 PHA03378
EBNA-3B; Provisional
 8-129 1.28e-03

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 40.82  E-value: 1.28e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940   8 APPPHRKPDSRETPGPRAQPLPEFSRRPRAAYA---GPRAWPDPRRRKTAPPADNR--AGFRDAVHAPAALPGPrlaqae 82
Cdd:PHA03378  690 APGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGrarPPAAAPGRARPPAAAPGRARppAAAPGRARPPAAAPGR------ 763

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1907082940  83 nrASPPEDSPRRAlsravRPPGARAASPAHPNRPRAAAQPSGTPQAL 129
Cdd:PHA03378  764 --ARPPAAAPGAP-----TPQPPPQAPPAPQQRPRGAPTPQPPPQAG 803
PHA03247 PHA03247
large tegument protein UL36; Provisional
 9-136 1.73e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 40.31  E-value: 1.73e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940    9 PPPHRKPDS-RETPGPRAQPLPEFSRRPRAAYAGPRAWPDPRRRKTAPP-------ADNRAGFRDAVHAPAALPGPRLAQ 80
Cdd:PHA03247  2483 PAEARFPFAaGAAPDPGGGGPPDPDAPPAPSRLAPAILPDEPVGEPVHPrmltwirGLEELASDDAGDPPPPLPPAAPPA 2562

                           90       100       110       120       130
                   ....*....|....*....|....*....|....*....|....*....|....*.
gi 1907082940   81 AENRASPPEDSPRRALSRAVRPPGARAASPAHPNRPRAAAQPSGTPQALSPEDREP 136
Cdd:PHA03247  2563 APDRSVPPPRPAPRPSEPAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSPLP 2618
PTZ00449 PTZ00449
104 kDa microneme/rhoptry antigen; Provisional
 3-133 1.90e-03

104 kDa microneme/rhoptry antigen; Provisional


Pssm-ID: 185628 [Multi-domain]  Cd Length: 943  Bit Score: 40.06  E-value: 1.90e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940   3 TQASNAPPPHRKPDSRET------PGP----RAQPLPEFSRRPraayAGPRAWPDPRRRKTaPPADNRAgfrDAVHAPAA 72
Cdd:PTZ00449  537 SKESDEPKEGGKPGETKEgevgkkPGPakehKPSKIPTLSKKP----EFPKDPKHPKDPEE-PKKPKRP---RSAQRPTR 608

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907082940  73 LPGPRLAQAENRASPPED-----SPRRAlsravrPPGARAASPAHPNRPRAAAQPSGTPQALSPED 133
Cdd:PTZ00449  609 PKSPKLPELLDIPKSPKRpespkSPKRP------PPPQRPSSPERPEGPKIIKSPKPPKSPKPPFD 668
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 34-154 2.90e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 39.58  E-value: 2.90e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940  34 RPRAAYAGPRAWPDPRR-RKTAPPADNRAGFRDAVHAPAALPGPRLAQAENRASPPEdSPRRALSRAVRPPGARAASPAH 112
Cdd:PRK07764  398 APSAAAAAPAAAPAPAAaAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGNAPAGGAP-SPPPAAAPSAQPAPAPAAAPEP 476

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1907082940 113 PNRPRAAAQPSGTPQALSPEDREPETQSCARACSADADEWEA 154
Cdd:PRK07764  477 TAAPAPAPPAAPAPAAAPAAPAAPAAPAGADDAATLRERWPE 518
flhF PRK06995
flagellar biosynthesis protein FlhF;
35-144 2.90e-03

flagellar biosynthesis protein FlhF;


Pssm-ID: 235904 [Multi-domain]  Cd Length: 484  Bit Score: 39.18  E-value: 2.90e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940  35 PRAAYAGPRAWPDPRrrkTAPPADNRAGfrdavhAPAALPGPRLAQAENRASPPEDSPRRALSRAVRPPGARAASPAHPN 114
Cdd:PRK06995   53 PPAAAAPAAAQPPPA---AAPAAVSRPA------APAAEPAPWLVEHAKRLTAQREQLVARAAAPAAPEAQAPAAPAERA 123

                          90       100       110
                  ....*....|....*....|....*....|
gi 1907082940 115 RPRAAAQPSGTPQALSPEDREPETQSCARA 144
Cdd:PRK06995  124 AAENAARRLARAAAAAPRPRVPADAAAAVA 153
PRK14965 PRK14965
DNA polymerase III subunits gamma and tau; Provisional
 73-157 6.91e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237871 [Multi-domain]  Cd Length: 576  Bit Score: 38.18  E-value: 6.91e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940  73 LPGPRLAQAENRASPPEDSPRRAlsrAVRPPGARAASPAHPNRPRAAAQPsgtPQALSPedrePETQSCARACSADADEW 152
Cdd:PRK14965  381 APAPPSAAWGAPTPAAPAAPPPA---AAPPVPPAAPARPAAARPAPAPAP---PAAAAP----PARSADPAAAASAGDRW 450


                  ....*
gi 1907082940 153 EAYCA 157
Cdd:PRK14965  451 RAFVA 455
PHA03247 PHA03247
large tegument protein UL36; Provisional
 8-126 7.43e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 38.38  E-value: 7.43e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940    8 APPPHRKPDSRETPGPRAQPLPEFSRRPRAAYAGPRAWPDPRRRKTAPP-ADNRAGFRDAVHAPAALPGPRLAQAENRAS 86
Cdd:PHA03247  2732 SPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPrRLTRPAVASLSESRESLPSPWDPADPPAAV 2811

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|.
gi 1907082940   87 PPEDSPRRALSRAVRP-PGARAASPAHPNRPRAAAQPSGTP 126
Cdd:PHA03247  2812 LAPAAALPPAASPAGPlPPPTSAQPTAPPPPPGPPPPSLPL 2852
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 54-140 8.55e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 37.77  E-value: 8.55e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907082940  54 APPADNRAGFRDAVHAPAALPGPRLAQAENRASPPEDSPRRALSRAVRPPGARAASPA--HPNRPRAAAQPSGTPQALSP 131
Cdd:PRK14951  373 AAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAaaAPAAAPAAAPAAVALAPAPP 452


                  ....*....
gi 1907082940 132 EDREPETQS 140
Cdd:PRK14951  453 AQAAPETVA 461
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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