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Conserved domains on  [gi|1907085746|ref|XP_036013057|]
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ataxin-3 isoform X4 [Mus musculus]

Protein Classification

ataxin-3 family protein( domain architecture ID 11244366)

ataxin-3 (ATXN3) family protein similar to Homo sapiens ataxin-3 and ataxin-3-like protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SUIM_assoc pfam16619
Unstructured region C-term to UIM in Ataxin3; SUIM_assoc is a natively unstructured region on ...
 84-143 5.16e-21

Unstructured region C-term to UIM in Ataxin3; SUIM_assoc is a natively unstructured region on Ataxin 3 proteins that lies immediately C-terminal to the second UIM domain linking it to a third when present. The function is not known. It is rich in glutamine residues.


:

Pssm-ID: 465203  Cd Length: 60  Bit Score: 81.46  E-value: 5.16e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907085746  84 SMCENSPQTSSPDLSSEELRRRREAYFEKQQQQQQEVDRPGPLSYPRERPTTSSGGRRSD 143
Cdd:pfam16619   1 NISQDVPQTSGTSLTSEELRKRREAYFEKQQQQQQQLDQPGQSSHPHERPTTSSGALGSD 60
 
Name Accession Description Interval E-value
SUIM_assoc pfam16619
Unstructured region C-term to UIM in Ataxin3; SUIM_assoc is a natively unstructured region on ...
 84-143 5.16e-21

Unstructured region C-term to UIM in Ataxin3; SUIM_assoc is a natively unstructured region on Ataxin 3 proteins that lies immediately C-terminal to the second UIM domain linking it to a third when present. The function is not known. It is rich in glutamine residues.


Pssm-ID: 465203  Cd Length: 60  Bit Score: 81.46  E-value: 5.16e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907085746  84 SMCENSPQTSSPDLSSEELRRRREAYFEKQQQQQQEVDRPGPLSYPRERPTTSSGGRRSD 143
Cdd:pfam16619   1 NISQDVPQTSGTSLTSEELRKRREAYFEKQQQQQQQLDQPGQSSHPHERPTTSSGALGSD 60
 
Name Accession Description Interval E-value
SUIM_assoc pfam16619
Unstructured region C-term to UIM in Ataxin3; SUIM_assoc is a natively unstructured region on ...
 84-143 5.16e-21

Unstructured region C-term to UIM in Ataxin3; SUIM_assoc is a natively unstructured region on Ataxin 3 proteins that lies immediately C-terminal to the second UIM domain linking it to a third when present. The function is not known. It is rich in glutamine residues.


Pssm-ID: 465203  Cd Length: 60  Bit Score: 81.46  E-value: 5.16e-21
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907085746  84 SMCENSPQTSSPDLSSEELRRRREAYFEKQQQQQQEVDRPGPLSYPRERPTTSSGGRRSD 143
Cdd:pfam16619   1 NISQDVPQTSGTSLTSEELRKRREAYFEKQQQQQQQLDQPGQSSHPHERPTTSSGALGSD 60
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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