NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1907102047|ref|XP_036014582|]
View 

zinc finger protein 395 isoform X1 [Mus musculus]

Protein Classification

ZNF395 family protein( domain architecture ID 11240124)

ZNF395 family protein, similar to Homo sapiens Zinc Finger Protein 395 (ZNF395) which is a transcription factor with roles in papillomavirus genes transcription, in transcription of the HTT gene in Huntington's disease, and in activating genes involved in the innate immune response and cancer

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
DUF4772 pfam15997
Domain of unknown function (DUF4772); This presumed domain is functionally uncharacterized. ...
 4-110 5.96e-39

Domain of unknown function (DUF4772); This presumed domain is functionally uncharacterized. This domain family is found in eukaryotes, and is typically between 107 and 124 amino acids in length. There is a single completely conserved residue V that may be functionally important.


:

Pssm-ID: 464964  Cd Length: 112  Bit Score: 137.52  E-value: 5.96e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907102047   4 RRLGKRSLLGARVLGPSA-AEVPSGATLPLEPQIEVPEGAMSLSP---LTSKDP-VCQEQPKELLKALGTSGHPQVAFQP 78
Cdd:pfam15997   1 RRLGKRSLLGTRVLAPGAdGDGYPGVGVPSDPQQELLDASEGLAPqpyTVLFDGgQCREYSEEELIGPGFQGLQQVPLQP 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1907102047  79 GQKVCVWYGGQECKGLVEQHSWAEDKVTVRLL 110
Cdd:pfam15997  81 GQKVYVTYNGREVAGLVEQHSWAEDEVTVQLL 112
 
Name Accession Description Interval E-value
DUF4772 pfam15997
Domain of unknown function (DUF4772); This presumed domain is functionally uncharacterized. ...
 4-110 5.96e-39

Domain of unknown function (DUF4772); This presumed domain is functionally uncharacterized. This domain family is found in eukaryotes, and is typically between 107 and 124 amino acids in length. There is a single completely conserved residue V that may be functionally important.


Pssm-ID: 464964  Cd Length: 112  Bit Score: 137.52  E-value: 5.96e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907102047   4 RRLGKRSLLGARVLGPSA-AEVPSGATLPLEPQIEVPEGAMSLSP---LTSKDP-VCQEQPKELLKALGTSGHPQVAFQP 78
Cdd:pfam15997   1 RRLGKRSLLGTRVLAPGAdGDGYPGVGVPSDPQQELLDASEGLAPqpyTVLFDGgQCREYSEEELIGPGFQGLQQVPLQP 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1907102047  79 GQKVCVWYGGQECKGLVEQHSWAEDKVTVRLL 110
Cdd:pfam15997  81 GQKVYVTYNGREVAGLVEQHSWAEDEVTVQLL 112
 
Name Accession Description Interval E-value
DUF4772 pfam15997
Domain of unknown function (DUF4772); This presumed domain is functionally uncharacterized. ...
 4-110 5.96e-39

Domain of unknown function (DUF4772); This presumed domain is functionally uncharacterized. This domain family is found in eukaryotes, and is typically between 107 and 124 amino acids in length. There is a single completely conserved residue V that may be functionally important.


Pssm-ID: 464964  Cd Length: 112  Bit Score: 137.52  E-value: 5.96e-39
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907102047   4 RRLGKRSLLGARVLGPSA-AEVPSGATLPLEPQIEVPEGAMSLSP---LTSKDP-VCQEQPKELLKALGTSGHPQVAFQP 78
Cdd:pfam15997   1 RRLGKRSLLGTRVLAPGAdGDGYPGVGVPSDPQQELLDASEGLAPqpyTVLFDGgQCREYSEEELIGPGFQGLQQVPLQP 80

                          90       100       110
                  ....*....|....*....|....*....|..
gi 1907102047  79 GQKVCVWYGGQECKGLVEQHSWAEDKVTVRLL 110
Cdd:pfam15997  81 GQKVYVTYNGREVAGLVEQHSWAEDEVTVQLL 112
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH