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Conserved domains on  [gi|1907068892|ref|XP_036020663|]
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potassium channel subfamily T member 2 isoform X16 [Mus musculus]

Protein Classification

BK_channel_a domain-containing protein( domain architecture ID 10507417)

BK_channel_a domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
BK_channel_a pfam03493
Calcium-activated BK potassium channel alpha subunit;
1-87 4.88e-19

Calcium-activated BK potassium channel alpha subunit;


:

Pssm-ID: 460947  Cd Length: 90  Bit Score: 82.21  E-value: 4.88e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068892   1 MGCerFCPKLSSVCSD-IKTRKQIphqicrEGQQSPEQWQKTYGRCSGNEVYHIVLEEstffaEYEGKSFTYASFHAHKK 79
Cdd:pfam03493  16 QSC--LCPGLSTLITNlLHTRSGE------EGQKSSEQWQKEYLRGSGNEIYTIKLSD-----AFVGKTFTEAARLAYKK 82


                  ....*...
gi 1907068892  80 FGVCLVGV 87
Cdd:pfam03493  83 LGVILIGI 90
 
Name Accession Description Interval E-value
BK_channel_a pfam03493
Calcium-activated BK potassium channel alpha subunit;
1-87 4.88e-19

Calcium-activated BK potassium channel alpha subunit;


Pssm-ID: 460947  Cd Length: 90  Bit Score: 82.21  E-value: 4.88e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068892   1 MGCerFCPKLSSVCSD-IKTRKQIphqicrEGQQSPEQWQKTYGRCSGNEVYHIVLEEstffaEYEGKSFTYASFHAHKK 79
Cdd:pfam03493  16 QSC--LCPGLSTLITNlLHTRSGE------EGQKSSEQWQKEYLRGSGNEIYTIKLSD-----AFVGKTFTEAARLAYKK 82


                  ....*...
gi 1907068892  80 FGVCLVGV 87
Cdd:pfam03493  83 LGVILIGI 90
 
Name Accession Description Interval E-value
BK_channel_a pfam03493
Calcium-activated BK potassium channel alpha subunit;
1-87 4.88e-19

Calcium-activated BK potassium channel alpha subunit;


Pssm-ID: 460947  Cd Length: 90  Bit Score: 82.21  E-value: 4.88e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907068892   1 MGCerFCPKLSSVCSD-IKTRKQIphqicrEGQQSPEQWQKTYGRCSGNEVYHIVLEEstffaEYEGKSFTYASFHAHKK 79
Cdd:pfam03493  16 QSC--LCPGLSTLITNlLHTRSGE------EGQKSSEQWQKEYLRGSGNEIYTIKLSD-----AFVGKTFTEAARLAYKK 82


                  ....*...
gi 1907068892  80 FGVCLVGV 87
Cdd:pfam03493  83 LGVILIGI 90
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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