NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1958669267|ref|XP_038945570|]
View 

P-selectin glycoprotein ligand 1 isoform X1 [Rattus norvegicus]

Protein Classification

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
rne super family cl35953
ribonuclease E; Reviewed
 95-282 4.23e-11

ribonuclease E; Reviewed


The actual alignment was detected with superfamily member PRK10811:

Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 65.06  E-value: 4.23e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267   95 TSETVTAQVATTGPADPDTERPAVgmlSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAE-TSQPAPI 173
Cdd:PRK10811   855 VEEQREAEEVQVQPVVAEVPVAAA---VEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPvTEQPQVI 931

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  174 KAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPAst 253
Cdd:PRK10811   932 TESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEA-- 1009

                          170       180
                   ....*....|....*....|....*....
gi 1958669267  254 etettqlprsqVVESLFTTSAVTEAPSTE 282
Cdd:PRK10811  1010 -----------TVEHNHATAPMTRAPAPE 1027
 
Name Accession Description Interval E-value
rne PRK10811
ribonuclease E; Reviewed
 95-282 4.23e-11

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 65.06  E-value: 4.23e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267   95 TSETVTAQVATTGPADPDTERPAVgmlSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAE-TSQPAPI 173
Cdd:PRK10811   855 VEEQREAEEVQVQPVVAEVPVAAA---VEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPvTEQPQVI 931

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  174 KAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPAst 253
Cdd:PRK10811   932 TESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEA-- 1009

                          170       180
                   ....*....|....*....|....*....
gi 1958669267  254 etettqlprsqVVESLFTTSAVTEAPSTE 282
Cdd:PRK10811  1010 -----------TVEHNHATAPMTRAPAPE 1027
Agg_substance NF033875
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, ...
 118-267 1.03e-06

LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, are LPXTG-anchored large surface proteins that contribute to virulence. Several closely related paralogs may be found in a single strain.


Pssm-ID: 411439 [Multi-domain]  Cd Length: 1306  Bit Score: 51.25  E-value: 1.03e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  118 VGMLSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSqpaPIKAETSQPAPIKAETSQPAPRE--------AETSQ 189
Cdd:NF033875    28 LGVLGVVGLATDNVQAAELDTQPGTTTVQPDNPDPQSGSET---PKTAVSEEATVQKDTTSQPTKVEevasekngAEQSS 104

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  190 PAPTEAETSQPAPTKAETS---QPAPTEAETSQP--APTEVetsQPAPTEAETSQPAPTEAETSQPASTETETTQLPRSQ 264
Cdd:NF033875   105 ATPNDTTNAQQPTVGAEKSaqeQPVVSPETTNEPlgQPTEV---APAENEANKSTSIPKEFETPDVDKAVDEAKKDPNIT 181


                   ...
gi 1958669267  265 VVE 267
Cdd:NF033875   182 VVE 184
Cuticle_3 pfam11018
Pupal cuticle protein C1; Insect cuticles are composite structures whose mechanical properties ...
 148-239 3.50e-04

Pupal cuticle protein C1; Insect cuticles are composite structures whose mechanical properties are optimized for biological function. The major components are the chitin filament system and the cuticular proteins, and the cuticle's properties are determined largely by the interactions between these two sets of molecules. The proteins can be ordered by species.


Pssm-ID: 431611 [Multi-domain]  Cd Length: 182  Bit Score: 41.29  E-value: 3.50e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 148 SQPAP--REAETSQPAPIKAET--SQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPT 223
Cdd:pfam11018  53 SAPAPvvTKSAYAAPAPVVTTYahAAPAPVVAKTVYAAPAVVVYAAPAPVVAKTVTYAAPAVHYAAPAPVVAKTVYAAPA 132

                          90
                  ....*....|....*.
gi 1958669267 224 EVETSQPAPTEAETSQ 239
Cdd:pfam11018 133 VQHYAAPAPVEAAAHA 148
Agg_substance NF033875
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, ...
 168-288 6.23e-04

LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, are LPXTG-anchored large surface proteins that contribute to virulence. Several closely related paralogs may be found in a single strain.


Pssm-ID: 411439 [Multi-domain]  Cd Length: 1306  Bit Score: 42.39  E-value: 6.23e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  168 SQPAPIKAETSQPAPR-EAETSQPAPTEAETSQpaptKAETSQpaPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAE 246
Cdd:NF033875    48 TQPGTTTVQPDNPDPQsGSETPKTAVSEEATVQ----KDTTSQ--PTKVEEVASEKNGAEQSSATPNDTTNAQQPTVGAE 121

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*
gi 1958669267  247 TS---QPAsTETETTQLPRSQVVESLFTTSAVTEAPSTePTAMET 288
Cdd:NF033875   122 KSaqeQPV-VSPETTNEPLGQPTEVAPAENEANKSTSI-PKEFET 164
Agg_substance NF033875
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, ...
 188-296 7.60e-04

LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, are LPXTG-anchored large surface proteins that contribute to virulence. Several closely related paralogs may be found in a single strain.


Pssm-ID: 411439 [Multi-domain]  Cd Length: 1306  Bit Score: 42.01  E-value: 7.60e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  188 SQPAPTEAETSQPAP-TKAETSQPAPTEAETSQpaptEVETSQPapTEAETSQPAPTEAETSQPASTETETTQLP----R 262
Cdd:NF033875    48 TQPGTTTVQPDNPDPqSGSETPKTAVSEEATVQ----KDTTSQP--TKVEEVASEKNGAEQSSATPNDTTNAQQPtvgaE 121

                           90       100       110
                   ....*....|....*....|....*....|....
gi 1958669267  263 SQVVESLFTTSAVTEAPSTEPTAMETLSTEANES 296
Cdd:NF033875   122 KSAQEQPVVSPETTNEPLGQPTEVAPAENEANKS 155
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 128-263 8.34e-04

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 41.29  E-value: 8.34e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 128 QRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAET 207
Cdd:NF040712  193 GRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDE 272

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1958669267 208 SQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAEtsQPASTETETTQLPRS 263
Cdd:NF040712  273 ATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAE--EPARPEPPPAPKPKR 326
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
117-215 8.77e-04

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 41.52  E-value: 8.77e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 117 AVGMLSTESVTQRRLSPVEMttRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPApreAETSQPAPTEAE 196
Cdd:COG5373    16 LVGLLGRVARLRRRVEELEA--ELAEAAEAASAPAEPEPEAAAAATAAAPEAAPAPVPEAPAAPP---AAAEAPAPAAAA 90

                          90
                  ....*....|....*....
gi 1958669267 197 TSQPAPTKAETSQPAPTEA 215
Cdd:COG5373    91 PPAEAEPAAAPAAASSFEE 109
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 138-264 1.38e-03

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 40.52  E-value: 1.38e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 138 TRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAET 217
Cdd:NF040712  193 GRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDE 272

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1958669267 218 SQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTETETTQLPRSQ 264
Cdd:NF040712  273 ATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPP 319
sucB TIGR01347
2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); This ...
 143-298 3.56e-03

2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); This model describes the TCA cycle 2-oxoglutarate system E2 component, dihydrolipoamide succinyltransferase. It is closely related to the pyruvate dehydrogenase E2 component, dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase. [Energy metabolism, TCA cycle]


Pssm-ID: 273565 [Multi-domain]  Cd Length: 403  Bit Score: 39.33  E-value: 3.56e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 143 TEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPRE-AETSQPAPTEAETSQPAPTKAETSQPAPTEAETSqpa 221
Cdd:TIGR01347  78 NDATAAPPAKSGEEKEETPAASAAAAPTAAANRPSLSPAARRlAKEHGIDLSAVPGTGVTGRVTKEDIIKKTEAPAS--- 154

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958669267 222 pteveTSQPAPTEAETSQPAPTEAETSQPasteteTTQLpRSQVVESLfttsavTEAPSTepTAMETLSTEANESAI 298
Cdd:TIGR01347 155 -----AQPPAAAAAAAAPAAATRPEERVK------MTRL-RQRIAERL------KEAQNS--TAMLTTFNEVDMSAV 211
NDFIP2 cd22306
NEDD4 family-interacting protein 2; The NEDD4 (neural precursor cell expressed, ...
 166-256 6.72e-03

NEDD4 family-interacting protein 2; The NEDD4 (neural precursor cell expressed, developmentally down-regulated protein 4)-family interacting proteins (NDFIPs) are adaptor proteins that recruit NEDD4 E3 ligases to specific substrate proteins, which leads to the ubiquitylation and subsequent degradation of these proteins. They also act as activators of the E3 ligase activity by releasing NEDD4 ligase from its auto-inhibitory conformation. NDFIP2 may play a role in protein trafficking.


Pssm-ID: 412070 [Multi-domain]  Cd Length: 229  Bit Score: 37.95  E-value: 6.72e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 166 ETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQ-----PAPTEVETSQPAPTEAETSQP 240
Cdd:cd22306    10 EDDPSESSASEQPSTSTQVQESSSNPAPETDAPPPPYSSITAGATAAPGTETQSefypvPPPYSVATSLPTYDEAEKAKA 89

                          90
                  ....*....|....*.
gi 1958669267 241 APTEAETSQPASTETE 256
Cdd:cd22306    90 AAMAAAAAEVAQREEE 105
 
Name Accession Description Interval E-value
rne PRK10811
ribonuclease E; Reviewed
 95-282 4.23e-11

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 65.06  E-value: 4.23e-11
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267   95 TSETVTAQVATTGPADPDTERPAVgmlSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAE-TSQPAPI 173
Cdd:PRK10811   855 VEEQREAEEVQVQPVVAEVPVAAA---VEPVVSAPVVEAVAEVVEEPVVVAEPQPEEVVVVETTHPEVIAAPvTEQPQVI 931

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  174 KAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPAst 253
Cdd:PRK10811   932 TESDVAVAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEA-- 1009

                          170       180
                   ....*....|....*....|....*....
gi 1958669267  254 etettqlprsqVVESLFTTSAVTEAPSTE 282
Cdd:PRK10811  1010 -----------TVEHNHATAPMTRAPAPE 1027
rne PRK10811
ribonuclease E; Reviewed
 144-293 1.83e-09

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 60.05  E-value: 1.83e-09
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  144 EAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPR-EAETSQPAPTEAETSQPAPTKAE-TSQPAPTEAETSQPA 221
Cdd:PRK10811   860 EAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVvVAEPQPEEVVVVETTHPEVIAAPvTEQPQVITESDVAVA 939

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958669267  222 PTEVETSQPAPTEAETSQPAPTEAETSQPASTETETTQLPRSQVVESlfTTSAVTEAPSTEPTAMETLSTEA 293
Cdd:PRK10811   940 QEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAE--VAAEVETVTAVEPEVAPAQVPEA 1009
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
101-254 1.42e-08

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 57.17  E-value: 1.42e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 101 AQVATTGPADPDTERPAVGMLSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQP 180
Cdd:PRK07003  385 ARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKANARASADSRCD 464

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958669267 181 APREAETSQPAPTEAETS-QPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTE 254
Cdd:PRK07003  465 ERDAQPPADSGSASAPASdAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAA 539
PHA03269 PHA03269
envelope glycoprotein C; Provisional
 124-261 2.35e-08

envelope glycoprotein C; Provisional


Pssm-ID: 165527 [Multi-domain]  Cd Length: 566  Bit Score: 56.28  E-value: 2.35e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 124 ESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAetsqPAPIKAETSQPAPREAETsqPAPTEAETSQPAPT 203
Cdd:PHA03269   16 NLIIANLNTNIPIPELHTSAATQKPDPAPAPHQAASRAPDPA----VAPTSAASRKPDLAQAPT--PAASEKFDPAPAPH 89

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958669267 204 KAETSQP----APTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPAStETETTQLP 261
Cdd:PHA03269   90 QAASRAPdpavAPQLAAAPKPDAAEAFTSAAQAHEAPADAGTSAASKKPDPAA-HTQHSPPP 150
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 133-260 4.49e-08

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 55.11  E-value: 4.49e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 133 PVEMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTeAETSQPAPTKAETSQPAP 212
Cdd:PRK14951  366 PAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPAAAASAPAAPPAAAPPAPV-AAPAAAAPAAAPAAAPAA 444

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1958669267 213 TEAETSQPAPTEVETSQ-PAPTEAETSQPAPTEAETSQPASTETETTQL 260
Cdd:PRK14951  445 VALAPAPPAQAAPETVAiPVRVAPEPAVASAAPAPAAAPAAARLTPTEE 493
PHA03378 PHA03378
EBNA-3B; Provisional
 149-315 1.28e-07

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 53.92  E-value: 1.28e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 149 QPAPREAETSQP---APIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEV 225
Cdd:PHA03378  675 QPSPTGANTMLPiqwAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRA 754

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 226 ETSQPAPTEAETSQPAPTEAETSQPASTETETTQLPRSqvveslftTSAVTEAPSTEPTAMETLSTEANESAIFLGPSIG 305
Cdd:PHA03378  755 RPPAAAPGRARPPAAAPGAPTPQPPPQAPPAPQQRPRG--------APTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILR 826

                         170
                  ....*....|
gi 1958669267 306 HLPDTGLKKG 315
Cdd:PHA03378  827 QLLTGGVKRG 836
PRK08691 PRK08691
DNA polymerase III subunits gamma and tau; Validated
 137-261 2.15e-07

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236333 [Multi-domain]  Cd Length: 709  Bit Score: 53.17  E-value: 2.15e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 137 TTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQP----APTEAETsqPAPTKAETSQPAP 212
Cdd:PRK08691  381 SAQTAEKETAAKKPQPRPEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPpwedAPDEAQT--AAGTAQTSAKSIQ 458

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1958669267 213 TEAETSQPAPTEVETSQPAPTEAETS-----QPAPTEAE-TSQPASTETETTQLP 261
Cdd:PRK08691  459 TASEAETPPENQVSKNKAADNETDAPlsevpSENPIQATpNDEAVETETFAHEAP 513
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 101-256 2.74e-07

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 52.67  E-value: 2.74e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 101 AQVATTGPADPDterPAVGMLSTESVTQRRLSPVEMTT-----RLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKA 175
Cdd:PRK13108  288 SEYVVDEALERE---PAELAAAAVASAASAVGPVGPGEpnqpdDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVE 364

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 176 ETSQPApreAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAptevETSQPAPTEAETSQPAPTEAETSQPASTET 255
Cdd:PRK13108  365 ETSEAD---IEREQPGDLAGQAPAAHQVDAEAASAAPEEPAALASE----AHDETEPEVPEKAAPIPDPAKPDELAVAGP 437


                  .
gi 1958669267 256 E 256
Cdd:PRK13108  438 G 438
PHA03378 PHA03378
EBNA-3B; Provisional
 141-264 3.26e-07

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 52.76  E-value: 3.26e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 141 APTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPT-----EA 215
Cdd:PHA03378  690 APGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGrarppAA 769

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1958669267 216 ETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTETETTQLPRSQ 264
Cdd:PHA03378  770 APGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQ 818
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
87-251 7.25e-07

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 51.39  E-value: 7.25e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  87 QRVSAGAGTSETVTAQVATTGPADPDTERPAVGMLSTESVTQ-RRLSPVEmttrlAPTEAETSQPAPREAETSQPAPIKA 165
Cdd:PRK07003  385 ARAAAAVGASAVPAVTAVTGAAGAALAPKAAAAAAATRAEAPpAAPAPPA-----TADRGDDAADGDAPVPAKANARASA 459

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 166 ETSQPAPIKAETSQPAPREAETS-QPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPte 244
Cdd:PRK07003  460 DSRCDERDAQPPADSGSASAPASdAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTP-- 537


                  ....*..
gi 1958669267 245 AETSQPA 251
Cdd:PRK07003  538 AAAAPAA 544
rne PRK10811
ribonuclease E; Reviewed
 132-297 7.63e-07

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 51.58  E-value: 7.63e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  132 SPVEMTTRLAPTEAET-----SQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAP-TKA 205
Cdd:PRK10811   823 SPMPLTVACASPEMASgkvwiRYPVVRPQDVQVEEQREAEEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPvVVA 902

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  206 ETSQPAPTEAETSQPAPTEVE-TSQPAPTEAETsqpAPTEAETSQPASTETETTqlprsQVVESLFTTSAVTEAPSTEPT 284
Cdd:PRK10811   903 EPQPEEVVVVETTHPEVIAAPvTEQPQVITESD---VAVAQEVAEHAEPVVEPQ-----DETADIEEAAETAEVVVAEPE 974

                          170
                   ....*....|...
gi 1958669267  285 AMETLSTEANESA 297
Cdd:PRK10811   975 VVAQPAAPVVAEV 987
Agg_substance NF033875
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, ...
 118-267 1.03e-06

LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, are LPXTG-anchored large surface proteins that contribute to virulence. Several closely related paralogs may be found in a single strain.


Pssm-ID: 411439 [Multi-domain]  Cd Length: 1306  Bit Score: 51.25  E-value: 1.03e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  118 VGMLSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSqpaPIKAETSQPAPIKAETSQPAPRE--------AETSQ 189
Cdd:NF033875    28 LGVLGVVGLATDNVQAAELDTQPGTTTVQPDNPDPQSGSET---PKTAVSEEATVQKDTTSQPTKVEevasekngAEQSS 104

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  190 PAPTEAETSQPAPTKAETS---QPAPTEAETSQP--APTEVetsQPAPTEAETSQPAPTEAETSQPASTETETTQLPRSQ 264
Cdd:NF033875   105 ATPNDTTNAQQPTVGAEKSaqeQPVVSPETTNEPlgQPTEV---APAENEANKSTSIPKEFETPDVDKAVDEAKKDPNIT 181


                   ...
gi 1958669267  265 VVE 267
Cdd:NF033875   182 VVE 184
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 85-246 1.14e-06

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 50.75  E-value: 1.14e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  85 LEQRVSAGAGTSETVTAQVatTGPADPDTERPAVGMLSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPApik 164
Cdd:PRK13108  296 LEREPAELAAAAVASAASA--VGPVGPGEPNQPDDVAEAVKAEVAEVTDEVAAESVVQVADRDGESTPAVEETSEAD--- 370

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 165 AETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPaptkAETSQPAPTEAETSQPAPTEVETSQPApteAETSQPAPTE 244
Cdd:PRK13108  371 IEREQPGDLAGQAPAAHQVDAEAASAAPEEPAALAS----EAHDETEPEVPEKAAPIPDPAKPDELA---VAGPGDDPAE 443


                  ..
gi 1958669267 245 AE 246
Cdd:PRK13108  444 PD 445
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 108-253 1.49e-06

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 50.75  E-value: 1.49e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 108 PADPDTERpavGMLSTESVTQRRLsPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAET 187
Cdd:PRK07764  365 PSASDDER---GLLARLERLERRL-GVAGGAGAPAAAAPSAAAAAPAAAPAPAAAAPAAAAAPAPAAAPQPAPAPAPAPA 440

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958669267 188 SQPAPTEAETSQ-----PAPTKAETSQPAPTEAETSQPAPtevETSQPAPTEAETSQPAPTEAETSQPAST 253
Cdd:PRK07764  441 PPSPAGNAPAGGapsppPAAAPSAQPAPAPAAAPEPTAAP---APAPPAAPAPAAAPAAPAAPAAPAGADD 508
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 134-285 1.51e-06

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 50.25  E-value: 1.51e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 134 VEMTT------RLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAET 207
Cdd:PRK07994  349 VEMTLlrmlafHPAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQ 428

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 208 SQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTETE----TTQLPRSQVVESLFTTSAVTEAPSTEP 283
Cdd:PRK07994  429 LQRAQGATKAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEayrwKATNPVEVKKEPVATPKALKKALEHEK 508


                  ..
gi 1958669267 284 TA 285
Cdd:PRK07994  509 TP 510
PHA03378 PHA03378
EBNA-3B; Provisional
 108-262 1.80e-06

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 50.45  E-value: 1.80e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 108 PADPDTERPAVGMLSTESVTQRRLSPVemttrlAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAET 187
Cdd:PHA03378  673 PYQPSPTGANTMLPIQWAPGTMQPPPR------APTPMRPPAAPPGRAQRPAAATGRARPPAAAPGRARPPAAAPGRARP 746

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 188 SQPAPTEAETSQPAPTKAET-----SQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTETETTQLPR 262
Cdd:PHA03378  747 PAAAPGRARPPAAAPGRARPpaaapGAPTPQPPPQAPPAPQQRPRGAPTPQPPPQAGPTSMQLMPRAAPGQQGPTKQILR 826
rne PRK10811
ribonuclease E; Reviewed
 80-253 2.08e-06

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 50.04  E-value: 2.08e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267   80 TMVAVLEQRVSAGAGTSETVTAQVATTGPADPDTERPAVgmlsTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQ 159
Cdd:PRK10811   862 EEVQVQPVVAEVPVAAAVEPVVSAPVVEAVAEVVEEPVV----VAEPQPEEVVVVETTHPEVIAAPVTEQPQVITESDVA 937

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  160 PAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAE--- 236
Cdd:PRK10811   938 VAQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEHNhat 1017

                          170       180
                   ....*....|....*....|
gi 1958669267  237 ---TSQPAPTEAETSQPAST 253
Cdd:PRK10811  1018 apmTRAPAPEYVPEAPRHSD 1037
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 158-288 2.28e-06

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 49.71  E-value: 2.28e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 158 SQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAE--TSQPAPTKAETSQPAPteaeTSQPAPTevetsqpAPTEA 235
Cdd:PRK14951  369 AAEAAAPAEKKTPARPEAAAPAAAPVAQAAAAPAPAAAPaaAASAPAAPPAAAPPAP----VAAPAAA-------APAAA 437

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1958669267 236 ETSQPAPTEAETSQPASTETETTQLPRSQVVESLFTTSAVTEAPSTEPTAMET 288
Cdd:PRK14951  438 PAAAPAAVALAPAPPAQAAPETVAIPVRVAPEPAVASAAPAPAAAPAAARLTP 490
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 175-260 2.31e-06

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 49.89  E-value: 2.31e-06
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  175 AETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPteveTSQPAPTEAETSQPAPTEAETSQPASTE 254
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKP----AAAAAAAAAPAAPPAAAAAAAPAAAAVE 114


                   ....*.
gi 1958669267  255 TETTQL 260
Cdd:PRK12270   115 DEVTPL 120
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 98-261 2.59e-06

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 49.98  E-value: 2.59e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  98 TVTAQVATTGPADPDTERPAVGMLSTESVTQRRLSPvemtTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAET 177
Cdd:PRK07764  583 QVEAVVGPAPGAAGGEGPPAPASSGPPEEAARPAAP----AAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVA 658

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 178 SQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTETET 257
Cdd:PRK07764  659 VPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDP 738


                  ....
gi 1958669267 258 TQLP 261
Cdd:PRK07764  739 VPLP 742
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 115-259 4.23e-06

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 49.09  E-value: 4.23e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 115 RPAVGMLSTESVTQRrlSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTE 194
Cdd:PRK07994  360 HPAAPLPEPEVPPQS--AAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATK 437

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958669267 195 AETSQPAPtkAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPT--EAETSQPASTETETTQ 259
Cdd:PRK07994  438 AKKSEPAA--ASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATnpVEVKKEPVATPKALKK 502
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
141-297 5.62e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 48.69  E-value: 5.62e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 141 APTEAETSQPAPREAETSQPAPIKAeTSQPAPIKAETSQPAPREAETSQPAP----TEAETSQPAPTKAETSQPAPTEAE 216
Cdd:PRK07003  382 APGARAAAAVGASAVPAVTAVTGAA-GAALAPKAAAAAAATRAEAPPAAPAPpataDRGDDAADGDAPVPAKANARASAD 460

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 217 TSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTETETTQLPRSQVVESLFTTSAVTEAPSTEPTAMETLSTEANES 296
Cdd:PRK07003  461 SRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAA 540


                  .
gi 1958669267 297 A 297
Cdd:PRK07003  541 A 541
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
81-285 6.68e-06

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 48.33  E-value: 6.68e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  81 MVAVLEQRVSAGAGTSETVTAQVATTGPAdpdterpavgmLSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQP 160
Cdd:PRK12323  360 MLAFRPGQSGGGAGPATAAAAPVAQPAPA-----------AAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSP 428

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 161 APIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAE---TSQPAPTEVETSQPAPTEAET 237
Cdd:PRK12323  429 APEALAAARQASARGPGGAPAPAPAPAAAPAAAARPAAAGPRPVAAAAAAAPARAApaaAPAPADDDPPPWEELPPEFAS 508

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*...
gi 1958669267 238 SQPAPTEAetsQPASTETETTQLPRSQVVESLFTTSAVTEAPSTEPTA 285
Cdd:PRK12323  509 PAPAQPDA---APAGWVAESIPDPATADPDDAFETLAPAPAAAPAPRA 553
PRK11633 PRK11633
cell division protein DedD; Provisional
 141-233 8.09e-06

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 46.92  E-value: 8.09e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 141 APTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQP 220
Cdd:PRK11633   58 AATQALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPKP 137

                          90
                  ....*....|...
gi 1958669267 221 APTEvetsQPAPT 233
Cdd:PRK11633  138 VVEE----KAAPT 146
PRK11633 PRK11633
cell division protein DedD; Provisional
 150-243 8.95e-06

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 46.53  E-value: 8.95e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 150 PAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEaetsQPAPTEVETSQ 229
Cdd:PRK11633   57 PAATQALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKP----QQKVEAPPAPK 132

                          90
                  ....*....|....
gi 1958669267 230 PAPTEAETSQPAPT 243
Cdd:PRK11633  133 PEPKPVVEEKAAPT 146
PRK08691 PRK08691
DNA polymerase III subunits gamma and tau; Validated
 173-299 1.01e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236333 [Multi-domain]  Cd Length: 709  Bit Score: 47.78  E-value: 1.01e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 173 IKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQP----APTEAETsqPAPTEAETS 248
Cdd:PRK08691  377 LQSPSAQTAEKETAAKKPQPRPEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPpwedAPDEAQT--AAGTAQTSA 454

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1958669267 249 QPASTETETTQLPRSQVVESLF----TTSAVTEAPSTEPtAMETLSTEANESAIF 299
Cdd:PRK08691  455 KSIQTASEAETPPENQVSKNKAadneTDAPLSEVPSENP-IQATPNDEAVETETF 508
PRK11907 PRK11907
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
187-275 1.12e-05

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;


Pssm-ID: 237019 [Multi-domain]  Cd Length: 814  Bit Score: 47.93  E-value: 1.12e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 187 TSQPAPTEAETSQPAP-TKAETSQPAPTEAETSQPAPTeveTSQPAPTEAETSQPAPTE-AETSQPASTETETT-QLPRS 263
Cdd:PRK11907   21 SNPKLAQAEEIVTTTPaTSTEAEQTTPVESDATEEADN---TETPVAATTAAEAPSSSEtAETSDPTSEATDTTtSEART 97

                          90
                  ....*....|..
gi 1958669267 264 QVVESLFTTSAV 275
Cdd:PRK11907   98 VTPAATETSKPV 109
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
162-293 1.17e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 47.46  E-value: 1.17e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 162 PIKAETSQP-----APIKAETSQPAPreaeTSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAE 236
Cdd:PRK14971  363 TQKGDDASGgrgpkQHIKPVFTQPAA----APQPSAAAAASPSPSQSSAAAQPSAPQSATQPAGTPPTVSVDPPAAVPVN 438

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1958669267 237 TSQPAPTEAETSQPASTETETTQLPRSqvvESLFTTSAVTEAPSTEPTAMETLSTEA 293
Cdd:PRK14971  439 PPSTAPQAVRPAQFKEEKKIPVSKVSS---LGPSTLRPIQEKAEQATGNIKEAPTGT 492
PRK12727 PRK12727
flagellar biosynthesis protein FlhF;
59-269 1.61e-05

flagellar biosynthesis protein FlhF;


Pssm-ID: 237182 [Multi-domain]  Cd Length: 559  Bit Score: 46.91  E-value: 1.61e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  59 TDPPETLISVPNMVAAHLELRTMVAVLEQRVSAGAGTSETVTAQVATTGPADPDTERPAVGMLSTESvtqrrlSPVEMTT 138
Cdd:PRK12727   68 APAPAPQAPTKPAAPVHAPLKLSANANMSQRQRVASAAEDMIAAMALRQPVSVPRQAPAAAPVRAAS------IPSPAAQ 141

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 139 RLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETS 218
Cdd:PRK12727  142 ALAHAAAVRTAPRQEHALSAVPEQLFADFLTTAPVPRAPVQAPVVAAPAPVPAIAAALAAHAAYAQDDDEQLDDDGFDLD 221

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1958669267 219 QPAPTEVetsQPAPTEAETSQPApteaetsQPASTETETTQLPRSQVVESL 269
Cdd:PRK12727  222 DALPQIL---PPAALPPIVVAPA-------APAALAAVAAAAPAPQNDEEL 262
PHA03269 PHA03269
envelope glycoprotein C; Provisional
 140-259 1.68e-05

envelope glycoprotein C; Provisional


Pssm-ID: 165527 [Multi-domain]  Cd Length: 566  Bit Score: 47.03  E-value: 1.68e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 140 LAPTEAETSQPAPREAETSQPapikaeTSQPAPikaetsQPAPREAETSQPAPTEAETSQPAPTkaetsqPAPTEAETSq 219
Cdd:PHA03269   58 VAPTSAASRKPDLAQAPTPAA------SEKFDP------APAPHQAASRAPDPAVAPQLAAAPK------PDAAEAFTS- 118

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1958669267 220 pAPTEVETSQPAPTEAETSQPAPT-EAETSQPASTETETTQ 259
Cdd:PHA03269  119 -AAQAHEAPADAGTSAASKKPDPAaHTQHSPPPFAYTRSME 158
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 170-248 2.19e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 46.81  E-value: 2.19e-05
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958669267  170 PAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETS 248
Cdd:PRK12270    40 STAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 154-238 2.21e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 46.81  E-value: 2.21e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  154 EAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPT 233
Cdd:PRK12270    34 ADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAV 113


                   ....*
gi 1958669267  234 EAETS 238
Cdd:PRK12270   114 EDEVT 118
PRK11633 PRK11633
cell division protein DedD; Provisional
 170-255 2.68e-05

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 44.99  E-value: 2.68e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 170 PAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQ 249
Cdd:PRK11633   57 PAATQALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPK 136


                  ....*.
gi 1958669267 250 PASTET 255
Cdd:PRK11633  137 PVVEEK 142
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 108-267 2.72e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 46.40  E-value: 2.72e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 108 PADPDTErPAVGMLSTESVTQRRLSPVEMTTrLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAET 187
Cdd:PRK07994  361 PAAPLPE-PEVPPQSAAPAASAQATAAPTAA-VAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKA 438

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 188 SQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTETETTQLPRSQVVE 267
Cdd:PRK07994  439 KKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAKLAA 518
PRK14971 PRK14971
DNA polymerase III subunit gamma/tau;
125-267 3.00e-05

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237874 [Multi-domain]  Cd Length: 614  Bit Score: 46.31  E-value: 3.00e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 125 SVTQRRLspVEMT-TRLA--PTEAETSQPApreaeTSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPA 201
Cdd:PRK14971  345 SKNKRLL--VELTlIQLAqlTQKGDDASGG-----RGPKQHIKPVFTQPAAAPQPSAAAAASPSPSQSSAAAQPSAPQSA 417

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958669267 202 PTKAETSQPAPTEaetsQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTETETTQLPRSQVVE 267
Cdd:PRK14971  418 TQPAGTPPTVSVD----PPAAVPVNPPSTAPQAVRPAQFKEEKKIPVSKVSSLGPSTLRPIQEKAE 479
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 119-223 3.45e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 45.96  E-value: 3.45e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 119 GMLSTE-SVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTeaET 197
Cdd:PRK14950  347 GQLPLElAVIEALLVPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPVP--HT 424

                          90       100
                  ....*....|....*....|....*.
gi 1958669267 198 SQPAPTKAETSQPAPTEAETSQPAPT 223
Cdd:PRK14950  425 PESAPKLTRAAIPVDEKPKYTPPAPP 450
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 167-246 3.52e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 46.42  E-value: 3.52e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  167 TSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAE 246
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 87-259 4.26e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 45.75  E-value: 4.26e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  87 QRVSAGAGTSETVTAQVATTGPADPDTERPAVGMLSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPA---PI 163
Cdd:PRK07764  605 SSGPPEEAARPAAPAAPAAPAAPAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAappPA 684

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 164 KAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPT 243
Cdd:PRK07764  685 PAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAP 764

                         170
                  ....*....|....*.
gi 1958669267 244 EAETSQPASTETETTQ 259
Cdd:PRK07764  765 APAAAPAAAPPPSPPS 780
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 149-230 5.41e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 45.65  E-value: 5.41e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  149 QPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVE-T 227
Cdd:PRK12270    37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEdE 116


                   ...
gi 1958669267  228 SQP 230
Cdd:PRK12270   117 VTP 119
PHA03378 PHA03378
EBNA-3B; Provisional
 150-287 5.88e-05

EBNA-3B; Provisional


Pssm-ID: 223065 [Multi-domain]  Cd Length: 991  Bit Score: 45.44  E-value: 5.88e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 150 PAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQ 229
Cdd:PHA03378  649 PTPHQPPQVEITPYKPTWTQIGHIPYQPSPTGANTMLPIQWAPGTMQPPPRAPTPMRPPAAPPGRAQRPAAATGRARPPA 728

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 230 PAPTEAETSQPAPTEAETSQPASTETETTQLPRSQVVESLFTTSAVT--EAPSTEPTAME 287
Cdd:PHA03378  729 AAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGRARPPAAAPGAPTpqPPPQAPPAPQQ 788
PHA03247 PHA03247
large tegument protein UL36; Provisional
 88-259 5.88e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.70  E-value: 5.88e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267   88 RVSAGAGTSETVTAQVATTGPADPDTERPAVGMLSTESVTQRRLSPVEMTTRLAPTEaetsqPAPREAETSQPAPIKAET 167
Cdd:PHA03247  2782 RLTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTA-----PPPPPGPPPPSLPLGGSV 2856

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  168 SQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAET 247
Cdd:PHA03247  2857 APGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPP 2936

                          170
                   ....*....|..
gi 1958669267  248 SQPASTETETTQ 259
Cdd:PHA03247  2937 PRPQPPLAPTTD 2948
PHA03247 PHA03247
large tegument protein UL36; Provisional
 69-286 5.98e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 45.70  E-value: 5.98e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267   69 PNMVAAHLELRTMVAVLEQRVSAGAGTSETVTAQVATTGPADPDTERPAVGMLSTESVTQRR----LSPVEMTTRLAPTE 144
Cdd:PHA03247  2804 PADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRppsrSPAAKPAAPARPPV 2883

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  145 AETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPT-EAETSQPAPT 223
Cdd:PHA03247  2884 RRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAgEPSGAVPQPW 2963

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958669267  224 --EVETSQPAPTEAETSQPAPTeAETSQPASTETETTQLPRsqvVESLFTTSAVTEAPSTEPTAM 286
Cdd:PHA03247  2964 lgALVPGRVAVPRFRVPQPAPS-REAPASSTPPLTGHSLSR---VSSWASSLALHEETDPPPVSL 3024
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 141-218 6.22e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 45.65  E-value: 6.22e-05
                           10        20        30        40        50        60        70
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958669267  141 APTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAetSQPAPTEAETSQPAPTKAETSQPAPTEAETS 218
Cdd:PRK12270    43 APTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPA--AAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 185-265 7.01e-05

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 45.27  E-value: 7.01e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  185 AETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTETETTQLPRSQ 264
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDEVT 118


                   .
gi 1958669267  265 V 265
Cdd:PRK12270   119 P 119
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 92-222 7.35e-05

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 45.09  E-value: 7.35e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  92 GAGTSETVTAQVATtgPADPDTERPAVGMLStESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPA 171
Cdd:PRK14951  367 AAAAEAAAPAEKKT--PARPEAAAPAAAPVA-QAAAAPAPAAAPAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPAAAPA 443

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1958669267 172 PIKAETSQPAPREAETSQ-PAPTEAETSQPAPTKAETSQPAPTEAETSQPAP 222
Cdd:PRK14951  444 AVALAPAPPAQAAPETVAiPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGD 495
PRK08691 PRK08691
DNA polymerase III subunits gamma and tau; Validated
 150-297 8.35e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236333 [Multi-domain]  Cd Length: 709  Bit Score: 45.08  E-value: 8.35e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 150 PAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQP----APTEV 225
Cdd:PRK08691  364 ASCDANAVIENTELQSPSAQTAEKETAAKKPQPRPEAETAQTPVQTASAAAMPSEGKTAGPVSNQENNDVPpwedAPDEA 443

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 226 ETSQ-PAPTEA-------ETSQPAPTEAETSQPASTETETtqlPRSQVVESlfttSAVTEAPSTEPTAMETLSTEANESA 297
Cdd:PRK08691  444 QTAAgTAQTSAksiqtasEAETPPENQVSKNKAADNETDA---PLSEVPSE----NPIQATPNDEAVETETFAHEAPAEP 516
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 90-251 9.94e-05

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 44.59  E-value: 9.94e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  90 SAGAGTSETVTAQVATTGPADPDTERPAVGMLSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAETS- 168
Cdd:PRK07764  627 PAPAGAAAAPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPa 706

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 169 -QPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAET 247
Cdd:PRK07764  707 aTPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPPEPDDPPDPAGAPAQPPPPPAPAPAAAPAAAPPPSPPSEEEEMA 786


                  ....
gi 1958669267 248 SQPA 251
Cdd:PRK07764  787 EDDA 790
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
91-289 1.01e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 44.48  E-value: 1.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  91 AGAGTSETVTAQVATTGPADPDTERPAVGMLSTESVTQRRLSPV---EMTTRLAPTEAETSQPAPREAETSQPAP-IKAE 166
Cdd:PRK12323  386 APAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPApeaLAAARQASARGPGGAPAPAPAPAAAPAAaARPA 465

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 167 TSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAE 246
Cdd:PRK12323  466 AAGPRPVAAAAAAAPARAAPAAAPAPADDDPPPWEELPPEFASPAPAQPDAAPAGWVAESIPDPATADPDDAFETLAPAP 545

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|...
gi 1958669267 247 TSQPASTETETTQLPRSQVVESLFTTSAVTEAPSTEPTAMETL 289
Cdd:PRK12323  546 AAAPAPRAAAATEPVVAPRPPRASASGLPDMFDGDWPALAARL 588
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
 115-242 1.09e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 44.32  E-value: 1.09e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 115 RPAVGMLSTESVTQRRLSPVEMTTRLAPTEAETSQ---PAPREAETSQPAPIKAETSQPAPiKAETSQPAPREAETSQPA 191
Cdd:PRK14951  365 KPAAAAEAAAPAEKKTPARPEAAAPAAAPVAQAAAapaPAAAPAAAASAPAAPPAAAPPAP-VAAPAAAAPAAAPAAAPA 443

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1958669267 192 PTEAETSQPAPTKAETSQ-PAPTEAETSQPAPTEVETSQPAPTEAETSQPAP 242
Cdd:PRK14951  444 AVALAPAPPAQAAPETVAiPVRVAPEPAVASAAPAPAAAPAAARLTPTEEGD 495
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
177-271 1.13e-04

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 43.85  E-value: 1.13e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 177 TSQPAprEAETSQPAPTEAETSQPAPTKAETSQPAPTeaeTSQPAPTEVETSQPAPTeaeTSQPAPTEAETSQPASTETE 256
Cdd:PRK13042   24 TTQAA--NATTPSSTKVEAPQSTPPSTKVEAPQSKPN---ATTPPSTKVEAPQQTPN---ATTPSSTKVETPQSPTTKQV 95

                          90
                  ....*....|....*.
gi 1958669267 257 TTQL-PRSQVVESLFT 271
Cdd:PRK13042   96 PTEInPKFKDLRAYYT 111
PRK13700 PRK13700
conjugal transfer protein TraD; Provisional
 56-261 1.26e-04

conjugal transfer protein TraD; Provisional


Pssm-ID: 184256 [Multi-domain]  Cd Length: 732  Bit Score: 44.18  E-value: 1.26e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  56 VYGTDPPETLISVPNMVAAhleLRTMVAVLEQRVSAGAGTSETVTAQVATTGPADPDTERPAVGMlSTESVTQRRLSPVE 135
Cdd:PRK13700  463 IYGEKAAATLFDVMNTRAF---FRSPSHKIAEFAAGEIGEKEHLKASEQYSYGADPVRDGVSTGK-DMERQTLVSYSDIQ 538

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 136 MTTRLAP-TEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQP-----APREAETSQ-----------PAPTEAETS 198
Cdd:PRK13700  539 SLPDLTCyVTLPGPYPAVKLSLKYQARPKVAPEFIPRDINPEMENRlsavlAAREAEGRQmaslfepdvpeVASGEDVTQ 618

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958669267 199 QPAPTKAETSQPAPTEAETSQPAPTEVetsqpAPTEAETSQPAPT---EAETSQPASTETEtTQLP 261
Cdd:PRK13700  619 AEQPQQPQQPQQPQQPQQPQQPVSPVI-----NDKKSDAGVNVPAggiEQELKMKPEEEME-QQLP 678
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
83-215 1.33e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 44.46  E-value: 1.33e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  83 AVLEQRVSAGAGTSETVTAQVATTGPADPD-TERPAVGMLSTESVTQRRLSPVEMTTRLAPTEAetSQPAPREAETS-QP 160
Cdd:PRK07003  408 AALAPKAAAAAAATRAEAPPAAPAPPATADrGDDAADGDAPVPAKANARASADSRCDERDAQPP--ADSGSASAPASdAP 485

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 1958669267 161 APIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEA 215
Cdd:PRK07003  486 PDAAFEPAPRAAAPSAATPAAVPDARAPAAASREDAPAAAAPPAPEARPPTPAAA 540
PHA03247 PHA03247
large tegument protein UL36; Provisional
 108-285 1.37e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.54  E-value: 1.37e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  108 PADPDTERPAVGMLSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPApikaetsQPAPIKAETSQPAPReaet 187
Cdd:PHA03247  2714 ALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPP-------APAPPAAPAAGPPRR---- 2782

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  188 sQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTETETTQlpRSQVVE 267
Cdd:PHA03247  2783 -LTRPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLG--GSVAPG 2859

                          170
                   ....*....|....*...
gi 1958669267  268 SLFTTSAVTEAPSTEPTA 285
Cdd:PHA03247  2860 GDVRRRPPSRSPAAKPAA 2877
PRK10905 PRK10905
cell division protein DamX; Validated
 142-255 1.45e-04

cell division protein DamX; Validated


Pssm-ID: 236792 [Multi-domain]  Cd Length: 328  Bit Score: 43.77  E-value: 1.45e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 142 PTEAETSQPAPREAETSQPApikaetSQPAPIKAETSQPAPREA--ETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQ 219
Cdd:PRK10905  124 PTEPATVAPVRNGNASRQTA------KTQTAERPATTRPARKQAviEPKKPQATAKTEPKPVAQTPKRTEPAAPVASTKA 197

                          90       100       110
                  ....*....|....*....|....*....|....*.
gi 1958669267 220 PAPTEVETSQPAPTEAETSQPAPTEAETSQPASTET 255
Cdd:PRK10905  198 PAATSTPAPKETATTAPVQTASPAQTTATPAAGGKT 233
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 145-228 1.51e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 44.11  E-value: 1.51e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  145 AETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAetsqPAPTKAETSQPAPTEAETSQPAPTE 224
Cdd:PRK12270    39 GSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAA----AAAAAAPAAPPAAAAAAAPAAAAVE 114


                   ....
gi 1958669267  225 VETS 228
Cdd:PRK12270   115 DEVT 118
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 101-269 1.60e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 44.09  E-value: 1.60e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 101 AQVATTGPADPDTERPAVGMLSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQP 180
Cdd:PRK07994  362 AAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKS 441

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 181 APREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTETETTQL 260
Cdd:PRK07994  442 EPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPVEVKKEPVATPKALKKALEHEKTPELAAKLAAEAI 521

                         170
                  ....*....|..
gi 1958669267 261 PRSQ---VVESL 269
Cdd:PRK07994  522 ERDPwaaLVSQL 533
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 134-216 1.72e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 43.64  E-value: 1.72e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 134 VEMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPreAETSQPAPTEAETSQPAPTKAETSQPAPT 213
Cdd:PRK14950  373 AAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRPVAPPV--PHTPESAPKLTRAAIPVDEKPKYTPPAPP 450


                  ...
gi 1958669267 214 EAE 216
Cdd:PRK14950  451 KEE 453
PRK11633 PRK11633
cell division protein DedD; Provisional
 160-244 1.89e-04

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 42.68  E-value: 1.89e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 160 PAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQ 239
Cdd:PRK11633   57 PAATQALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPK 136


                  ....*
gi 1958669267 240 PAPTE 244
Cdd:PRK11633  137 PVVEE 141
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 169-250 1.91e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 44.11  E-value: 1.91e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  169 QPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAE-T 247
Cdd:PRK12270    37 GPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEdE 116


                   ...
gi 1958669267  248 SQP 250
Cdd:PRK12270   117 VTP 119
PRK10856 PRK10856
cytoskeleton protein RodZ;
158-252 1.94e-04

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 43.09  E-value: 1.94e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 158 SQPAPIKAETSQPApikaeTSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAET 237
Cdd:PRK10856  159 GQSVPLDTSTTTDP-----ATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPATPDG 233

                          90
                  ....*....|....*.
gi 1958669267 238 SQPAPTEAE-TSQPAS 252
Cdd:PRK10856  234 AAPLPTDQAgVSTPAA 249
PLN03209 PLN03209
translocon at the inner envelope of chloroplast subunit 62; Provisional
 150-336 1.98e-04

translocon at the inner envelope of chloroplast subunit 62; Provisional


Pssm-ID: 178748 [Multi-domain]  Cd Length: 576  Bit Score: 43.76  E-value: 1.98e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 150 PAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEA-----ETSQPAPTKAETSQPAPTEAETSQ-PAPT 223
Cdd:PLN03209  331 KESDAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPYTAyedlkPPTSPIPTPPSSSPASSKSVDAVAkPAEP 410

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 224 EVETSQPAPTEAETSQPAPTEAETSQPASTETETTQL---------PRSQVVESLFTTSAVTEAPSTePTAMETLSTEAN 294
Cdd:PLN03209  411 DVVPSPGSASNVPEVEPAQVEAKKTRPLSPYARYEDLkpptspsptAPTGVSPSVSSTSSVPAVPDT-APATAATDAAAP 489

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1958669267 295 ESAiFLGPSIGHLPDTGLKKGLIVTPGSSLAPTPPGTSDLIP 336
Cdd:PLN03209  490 PPA-NMRPLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVV 530
PRK12678 PRK12678
transcription termination factor Rho; Provisional
 151-264 2.60e-04

transcription termination factor Rho; Provisional


Pssm-ID: 237171 [Multi-domain]  Cd Length: 672  Bit Score: 43.35  E-value: 2.60e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 151 APREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAET-SQPAPTEVETSQ 229
Cdd:PRK12678   54 AIKEARGGGAAAAAATPAAPAAAARRAARAAAAARQAEQPAAEAAAAKAEAAPAARAAAAAAAEAASaPEAAQARERRER 133

                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1958669267 230 PAPTEAETSQPAPTEAETSQPASTETETTQLPRSQ 264
Cdd:PRK12678  134 GEAARRGAARKAGEGGEQPATEARADAAERTEEEE 168
PRK07003 PRK07003
DNA polymerase III subunit gamma/tau;
150-287 2.65e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 235906 [Multi-domain]  Cd Length: 830  Bit Score: 43.30  E-value: 2.65e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 150 PAPREAETSQPAPIKAETSQPAPIKAETSQpAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQ 229
Cdd:PRK07003  375 RVAGAVPAPGARAAAAVGASAVPAVTAVTG-AAGAALAPKAAAAAAATRAEAPPAAPAPPATADRGDDAADGDAPVPAKA 453

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1958669267 230 PAPTEAETSQPAPTEAETSQPASTETETTQLPRSQVVESlfTTSAVTEAPSTEPTAME 287
Cdd:PRK07003  454 NARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEP--APRAAAPSAATPAAVPD 509
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 135-217 2.76e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 43.34  E-value: 2.76e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  135 EMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTE 214
Cdd:PRK12270    31 EFFADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAA 110


                   ...
gi 1958669267  215 AET 217
Cdd:PRK12270   111 AAV 113
PRK11907 PRK11907
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
177-257 2.79e-04

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;


Pssm-ID: 237019 [Multi-domain]  Cd Length: 814  Bit Score: 43.30  E-value: 2.79e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 177 TSQPAPREAETSQPAP-TEAETSQPAPTKAETSQPAPTeAETSQPAPTEVETSQPaPTEAETSQPAPT-------EAETS 248
Cdd:PRK11907   21 SNPKLAQAEEIVTTTPaTSTEAEQTTPVESDATEEADN-TETPVAATTAAEAPSS-SETAETSDPTSEatdtttsEARTV 98


                  ....*....
gi 1958669267 249 QPASTETET 257
Cdd:PRK11907   99 TPAATETSK 107
PRK12323 PRK12323
DNA polymerase III subunit gamma/tau;
67-252 3.31e-04

DNA polymerase III subunit gamma/tau;


Pssm-ID: 237057 [Multi-domain]  Cd Length: 700  Bit Score: 42.94  E-value: 3.31e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  67 SVPNMVAAHLELRTMVAVLEQRVSAGAGTSETVTAQVATTGPADPDTERPAVGMLSTESV---TQRRLSPVEMTTRLAPT 143
Cdd:PRK12323  372 AGPATAAAAPVAQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEalaAARQASARGPGGAPAPA 451

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 144 EAETSQPAPRE---AETSQPAPIKAETSQPAPIKAETSQPAPRE--------AETSQPAPTEAETSQPAPTKAETSQPAP 212
Cdd:PRK12323  452 PAPAAAPAAAArpaAAGPRPVAAAAAAAPARAAPAAAPAPADDDpppweelpPEFASPAPAQPDAAPAGWVAESIPDPAT 531

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1958669267 213 TEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPAS 252
Cdd:PRK12323  532 ADPDDAFETLAPAPAAAPAPRAAAATEPVVAPRPPRASAS 571
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 141-279 3.39e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.05  E-value: 3.39e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 141 APTEAETSQPAPREAETSQPAPIKAETSQPAPIKAET---SQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAET 217
Cdd:PRK07764  596 GGEGPPAPASSGPPEEAARPAAPAAPAAPAAPAPAGAaaaPAEASAAPAPGVAAPEHHPKHVAVPDASDGGDGWPAKAGG 675

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958669267 218 SQPA---PTEVETSQPAPTEAETSQPAPTEAETSQPASTETETTQLPRSQVVESLFTTSAVTEAP 279
Cdd:PRK07764  676 AAPAappPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVP 740
Cuticle_3 pfam11018
Pupal cuticle protein C1; Insect cuticles are composite structures whose mechanical properties ...
 148-239 3.50e-04

Pupal cuticle protein C1; Insect cuticles are composite structures whose mechanical properties are optimized for biological function. The major components are the chitin filament system and the cuticular proteins, and the cuticle's properties are determined largely by the interactions between these two sets of molecules. The proteins can be ordered by species.


Pssm-ID: 431611 [Multi-domain]  Cd Length: 182  Bit Score: 41.29  E-value: 3.50e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 148 SQPAP--REAETSQPAPIKAET--SQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPT 223
Cdd:pfam11018  53 SAPAPvvTKSAYAAPAPVVTTYahAAPAPVVAKTVYAAPAVVVYAAPAPVVAKTVTYAAPAVHYAAPAPVVAKTVYAAPA 132

                          90
                  ....*....|....*.
gi 1958669267 224 EVETSQPAPTEAETSQ 239
Cdd:pfam11018 133 VQHYAAPAPVEAAAHA 148
PHA03269 PHA03269
envelope glycoprotein C; Provisional
 158-295 3.65e-04

envelope glycoprotein C; Provisional


Pssm-ID: 165527 [Multi-domain]  Cd Length: 566  Bit Score: 42.79  E-value: 3.65e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 158 SQPAPIKAeTSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTevetsqPAPTEAET 237
Cdd:PHA03269   21 NLNTNIPI-PELHTSAATQKPDPAPAPHQAASRAPDPAVAPTSAASRKPDLAQAPTPAASEKFDPA------PAPHQAAS 93

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958669267 238 SQPAPTEAETS------QPASTETETTQLPRSQVVESLFTTSAV-TEAPSTEPTAMETLSTEANE 295
Cdd:PHA03269   94 RAPDPAVAPQLaaapkpDAAEAFTSAAQAHEAPADAGTSAASKKpDPAAHTQHSPPPFAYTRSME 158
PRK10856 PRK10856
cytoskeleton protein RodZ;
161-258 3.97e-04

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 42.32  E-value: 3.97e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 161 APIKAETSQPAPIKAETSQPApreaeTSQPAPTEAETSQPAPTKAETSQPAPTEAETSQpAPTEVETSQPAPTEAETSQP 240
Cdd:PRK10856  152 AELSQNSGQSVPLDTSTTTDP-----ATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQ-QNAVVAPSQANVDTAATPAP 225

                          90       100
                  ....*....|....*....|.
gi 1958669267 241 APTEAETSQ---PASTETETT 258
Cdd:PRK10856  226 AAPATPDGAaplPTDQAGVST 246
PHA03247 PHA03247
large tegument protein UL36; Provisional
 96-297 5.49e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 42.62  E-value: 5.49e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267   96 SETVTAQVATTGPADPDTERPAVGMLSTESVTQRRlspvemtTRLAPTEAETSQPAPREAETSQpAPIKAETSQPAPIKa 175
Cdd:PHA03247  2636 NEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRL-------GRAAQASSPPQRPRRRAARPTV-GSLTSLADPPPPPP- 2706

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  176 eTSQPAPREAETSQPAPTEAETSQPApTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTET 255
Cdd:PHA03247  2707 -TPEPAPHALVSATPLPPGPAAARQA-SPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLT 2784

                          170       180       190       200
                   ....*....|....*....|....*....|....*....|..
gi 1958669267  256 ETTQLPRSQVVESLFTTSAVTEAPSTEPTAMETLSTEANESA 297
Cdd:PHA03247  2785 RPAVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAG 2826
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 133-236 5.62e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 42.10  E-value: 5.62e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 133 PVEM----TTRLAPTEAETSQPAPREAETSQPAPikAETSQPAPIKAETSQPAPREAETSQPAPTEAETSqpAPTKAETS 208
Cdd:PRK14950  350 PLELavieALLVPVPAPQPAKPTAAAPSPVRPTP--APSTRPKAAAAANIPPKEPVRETATPPPVPPRPV--APPVPHTP 425

                          90       100
                  ....*....|....*....|....*...
gi 1958669267 209 QPAPTEAETSQPAPTEVETSQPAPTEAE 236
Cdd:PRK14950  426 ESAPKLTRAAIPVDEKPKYTPPAPPKEE 453
PRK13914 PRK13914
invasion associated endopeptidase;
169-294 5.63e-04

invasion associated endopeptidase;


Pssm-ID: 237555 [Multi-domain]  Cd Length: 481  Bit Score: 42.10  E-value: 5.63e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 169 QPAPIKAETSQPAPReAETSQPAPteAETSQPAPTKAETSQPAPTEAETSQPApTEVETSQPAPTEAETSQPAPTEAETS 248
Cdd:PRK13914  239 QKLAIKQTANTATPK-AEVKTEAP--AAEKQAAPVVKENTNTNTATTEKKETT-TQQQTAPKAPTEAAKPAPAPSTNTNA 314

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1958669267 249 QPASTETETTqlprsqvveslfTTSAVTEAPSTEPTAMETLSTEAN 294
Cdd:PRK13914  315 NKTNTNTNTN------------TNNTNTSTPSKNTNTNTNSNTNTN 348
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 147-246 5.72e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 42.10  E-value: 5.72e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 147 TSQPAPREAETSQPAPiKAETSQPAPIKAetsqPAPREAETSQPAPTEAETSQPAPTKAE-TSQPAPTeaeTSQPAPTEV 225
Cdd:PRK14950  361 VPVPAPQPAKPTAAAP-SPVRPTPAPSTR----PKAAAAANIPPKEPVRETATPPPVPPRpVAPPVPH---TPESAPKLT 432

                          90       100
                  ....*....|....*....|.
gi 1958669267 226 ETSQPAPTEAETSQPAPTEAE 246
Cdd:PRK14950  433 RAAIPVDEKPKYTPPAPPKEE 453
dnaA PRK14086
chromosomal replication initiator protein DnaA;
65-283 5.86e-04

chromosomal replication initiator protein DnaA;


Pssm-ID: 237605 [Multi-domain]  Cd Length: 617  Bit Score: 42.12  E-value: 5.86e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  65 LISVPNMVAAH-LELRTMVAVLEQ---------RVSAGAGTSETVTAQVATTGPADPDTERPAVGMLSTESVTQRRLSPV 134
Cdd:PRK14086   50 LLAVPNEFAKEvLEGRLAPIISETlsrelgrpiRIAITVDPSAGEPAPPPPHARRTSEPELPRPGRRPYEGYGGPRADDR 129

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 135 EMTTRLAPTEAETSQPAPREAETSQPAPIKAEtSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTE 214
Cdd:PRK14086  130 PPGLPRQDQLPTARPAYPAYQQRPEPGAWPRA-ADDYGWQQQRLGFPPRAPYASPASYAPEQERDREPYDAGRPEYDQRR 208

                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958669267 215 AETSQPAPtevETSQPAPTEAETSQPAPTEAETSQPASTETETTQLPRSQVVESLFTTSAVTEAPSTEP 283
Cdd:PRK14086  209 RDYDHPRP---DWDRPRRDRTDRPEPPPGAGHVHRGGPGPPERDDAPVVPIRPSAPGPLAAQPAPAPGP 274
PHA03247 PHA03247
large tegument protein UL36; Provisional
 115-288 6.03e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 42.62  E-value: 6.03e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  115 RPAVGMLSTESVTQRRLSP-VEMTTRLA--PTEAETSQPAPREAETSQPAPIKAETSQPAPiKAETSQPAPREAETSQPA 191
Cdd:PHA03247  2672 RAAQASSPPQRPRRRAARPtVGSLTSLAdpPPPPPTPEPAPHALVSATPLPPGPAAARQAS-PALPAAPAPPAVPAGPAT 2750

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  192 PTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAeTSQPASTETETTQLPRSQVVESLF- 270
Cdd:PHA03247  2751 PGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDP-ADPPAAVLAPAAALPPAASPAGPLp 2829

                          170
                   ....*....|....*....
gi 1958669267  271 -TTSAVTEAPSTEPTAMET 288
Cdd:PHA03247  2830 pPTSAQPTAPPPPPGPPPP 2848
Agg_substance NF033875
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, ...
 168-288 6.23e-04

LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, are LPXTG-anchored large surface proteins that contribute to virulence. Several closely related paralogs may be found in a single strain.


Pssm-ID: 411439 [Multi-domain]  Cd Length: 1306  Bit Score: 42.39  E-value: 6.23e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  168 SQPAPIKAETSQPAPR-EAETSQPAPTEAETSQpaptKAETSQpaPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAE 246
Cdd:NF033875    48 TQPGTTTVQPDNPDPQsGSETPKTAVSEEATVQ----KDTTSQ--PTKVEEVASEKNGAEQSSATPNDTTNAQQPTVGAE 121

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*
gi 1958669267  247 TS---QPAsTETETTQLPRSQVVESLFTTSAVTEAPSTePTAMET 288
Cdd:NF033875   122 KSaqeQPV-VSPETTNEPLGQPTEVAPAENEANKSTSI-PKEFET 164
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
117-225 7.04e-04

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 41.16  E-value: 7.04e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 117 AVGMLSTESVTqrrlspveMTTRLAptEAETSQPAPREAETSQPAPIKAETSQPAPikAETSQPAPReAETSQPAPTeae 196
Cdd:PRK13042   12 ALGLLTTGVIT--------TTTQAA--NATTPSSTKVEAPQSTPPSTKVEAPQSKP--NATTPPSTK-VEAPQQTPN--- 75

                          90       100
                  ....*....|....*....|....*....
gi 1958669267 197 TSQPAPTKAETSQpapteAETSQPAPTEV 225
Cdd:PRK13042   76 ATTPSSTKVETPQ-----SPTTKQVPTEI 99
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 85-222 7.26e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.90  E-value: 7.26e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  85 LEQRVSAGAGTseTVTAQVATTGPADPDTERPAVGmlstesvtqrrlsPVEMTTRLAPTEAETSQPAPR-EAETSQPAPI 163
Cdd:PRK07764  381 LERRLGVAGGA--GAPAAAAPSAAAAAPAAAPAPA-------------AAAPAAAAAPAPAAAPQPAPApAPAPAPPSPA 445

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1958669267 164 KAETSQPAPIKAETSQPAPREAETSQPAPteAETSQPAPTKAETSQPAPTEAETSQPAP 222
Cdd:PRK07764  446 GNAPAGGAPSPPPAAAPSAQPAPAPAAAP--EPTAAPAPAPPAAPAPAAAPAAPAAPAA 502
PRK13335 PRK13335
superantigen-like protein SSL3; Reviewed;
117-274 7.44e-04

superantigen-like protein SSL3; Reviewed;


Pssm-ID: 139494 [Multi-domain]  Cd Length: 356  Bit Score: 41.65  E-value: 7.44e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 117 AVGMLSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAE-TSQP--APREAETSQPAPT 193
Cdd:PRK13335   12 ALGLLTTGAITVTTQSVKAEKIQSTKVDKVPTLKAERLAMINITAGANSATTQAANTRQErTPKLekAPNTNEEKTSASK 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 194 EAETSQPAPTKAET-SQPAPTEAETSQPApTEVETSQPAP---TEAETSQPAPTEAETS-QPASTETETTQL---PRSQV 265
Cdd:PRK13335   92 IEKISQPKQEEQKSlNISATPAPKQEQSQ-TTTESTTPKTkvtTPPSTNTPQPMQSTKSdTPQSPTIKQAQTdmtPKYED 170


                  ....*....
gi 1958669267 266 VESLFTTSA 274
Cdd:PRK13335  171 LRAYYTKPS 179
Agg_substance NF033875
LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, ...
 188-296 7.60e-04

LPXTG-anchored aggregation substance; Aggregation substances, as described in Enterococcus, are LPXTG-anchored large surface proteins that contribute to virulence. Several closely related paralogs may be found in a single strain.


Pssm-ID: 411439 [Multi-domain]  Cd Length: 1306  Bit Score: 42.01  E-value: 7.60e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  188 SQPAPTEAETSQPAP-TKAETSQPAPTEAETSQpaptEVETSQPapTEAETSQPAPTEAETSQPASTETETTQLP----R 262
Cdd:NF033875    48 TQPGTTTVQPDNPDPqSGSETPKTAVSEEATVQ----KDTTSQP--TKVEEVASEKNGAEQSSATPNDTTNAQQPtvgaE 121

                           90       100       110
                   ....*....|....*....|....*....|....
gi 1958669267  263 SQVVESLFTTSAVTEAPSTEPTAMETLSTEANES 296
Cdd:NF033875   122 KSAQEQPVVSPETTNEPLGQPTEVAPAENEANKS 155
PRK12727 PRK12727
flagellar biosynthesis protein FlhF;
124-306 7.60e-04

flagellar biosynthesis protein FlhF;


Pssm-ID: 237182 [Multi-domain]  Cd Length: 559  Bit Score: 41.90  E-value: 7.60e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 124 ESVTQRRLspvEMTTRLAPTEAETSQPAPReAETSQPAPIKAetsqPAPIKAETSQPAPREAETSQPAPTEAET-SQPAP 202
Cdd:PRK12727   48 EELVQRAL---ETARSDTPATAAAPAPAPQ-APTKPAAPVHA----PLKLSANANMSQRQRVASAAEDMIAAMAlRQPVS 119

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 203 TKAETSQPAPTEAeTSQPAPTeveTSQPAPTEAETSQPAPTEAETSQPastetettqlprSQVVESLFTTSAVTEAPSTE 282
Cdd:PRK12727  120 VPRQAPAAAPVRA-ASIPSPA---AQALAHAAAVRTAPRQEHALSAVP------------EQLFADFLTTAPVPRAPVQA 183

                         170       180
                  ....*....|....*....|....
gi 1958669267 283 PTAMETLSTEANESAIFLGPSIGH 306
Cdd:PRK12727  184 PVVAAPAPVPAIAAALAAHAAYAQ 207
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 145-226 8.11e-04

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 41.80  E-value: 8.11e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  145 AETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPrEAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTE 224
Cdd:PRK12270    38 PGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPP-AAAAPAAPPKPAAAAAAAAAPAAPPAAAAAAAPAAAAVEDE 116


                   ..
gi 1958669267  225 VE 226
Cdd:PRK12270   117 VT 118
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 128-263 8.34e-04

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 41.29  E-value: 8.34e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 128 QRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAET 207
Cdd:NF040712  193 GRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDE 272

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1958669267 208 SQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAEtsQPASTETETTQLPRS 263
Cdd:NF040712  273 ATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAE--EPARPEPPPAPKPKR 326
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
117-215 8.77e-04

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 41.52  E-value: 8.77e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 117 AVGMLSTESVTQRRLSPVEMttRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPApreAETSQPAPTEAE 196
Cdd:COG5373    16 LVGLLGRVARLRRRVEELEA--ELAEAAEAASAPAEPEPEAAAAATAAAPEAAPAPVPEAPAAPP---AAAEAPAPAAAA 90

                          90
                  ....*....|....*....
gi 1958669267 197 TSQPAPTKAETSQPAPTEA 215
Cdd:COG5373    91 PPAEAEPAAAPAAASSFEE 109
PRK14950 PRK14950
DNA polymerase III subunits gamma and tau; Provisional
 157-256 9.22e-04

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237864 [Multi-domain]  Cd Length: 585  Bit Score: 41.33  E-value: 9.22e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 157 TSQPAPIKAETSQPAPiKAETSQPAPreaeTSQPAPTEAETSQPAPTKAETSQPAPTEAE-TSQPAPTeveTSQPAPTEA 235
Cdd:PRK14950  361 VPVPAPQPAKPTAAAP-SPVRPTPAP----STRPKAAAAANIPPKEPVRETATPPPVPPRpVAPPVPH---TPESAPKLT 432

                          90       100
                  ....*....|....*....|.
gi 1958669267 236 ETSQPAPTEAETSQPASTETE 256
Cdd:PRK14950  433 RAAIPVDEKPKYTPPAPPKEE 453
PRK11907 PRK11907
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
167-260 9.45e-04

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;


Pssm-ID: 237019 [Multi-domain]  Cd Length: 814  Bit Score: 41.76  E-value: 9.45e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 167 TSQPAPIKAETSQPAPREA-ETSQPAPTEAETSQPAPTkaeTSQPAPTEAETSQPAPTE-VETSQPAPTEAETSQ---PA 241
Cdd:PRK11907   21 SNPKLAQAEEIVTTTPATStEAEQTTPVESDATEEADN---TETPVAATTAAEAPSSSEtAETSDPTSEATDTTTseaRT 97

                          90
                  ....*....|....*....
gi 1958669267 242 PTEAETSQPASTETETTQL 260
Cdd:PRK11907   98 VTPAATETSKPVEGQTVDV 116
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 143-285 9.49e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.51  E-value: 9.49e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 143 TEAETSQPAPReAETSQPAPIKAETSQPAPIKAETSQPAPREAEtSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAP 222
Cdd:PRK07764  370 DERGLLARLER-LERRLGVAGGAGAPAAAAPSAAAAAPAAAPAP-AAAAPAAAAAPAPAAAPQPAPAPAPAPAPPSPAGN 447

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958669267 223 TEVETSQPAPTeaetsQPAPTEAETSQPASTETETTQLPRSQVVESlftTSAVTEAPSTEPTA 285
Cdd:PRK07764  448 APAGGAPSPPP-----AAAPSAQPAPAPAAAPEPTAAPAPAPPAAP---APAAAPAAPAAPAA 502
PRK10856 PRK10856
cytoskeleton protein RodZ;
171-278 9.96e-04

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 41.17  E-value: 9.96e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 171 APIKAETSQPAPREAETSQPAPTeaetsQPAPTKAETSQPAPTEAETSQPAPTEVETSQpAPTEAETSQPAPTEAETSQP 250
Cdd:PRK10856  152 AELSQNSGQSVPLDTSTTTDPAT-----TPAPAAPVDTTPTNSQTPAVATAPAPAVDPQ-QNAVVAPSQANVDTAATPAP 225

                          90       100
                  ....*....|....*....|....*...
gi 1958669267 251 ASTETETTQLPRSQVVESLFTTSAVTEA 278
Cdd:PRK10856  226 AAPATPDGAAPLPTDQAGVSTPAADPNA 253
Cuticle_3 pfam11018
Pupal cuticle protein C1; Insect cuticles are composite structures whose mechanical properties ...
 168-261 1.35e-03

Pupal cuticle protein C1; Insect cuticles are composite structures whose mechanical properties are optimized for biological function. The major components are the chitin filament system and the cuticular proteins, and the cuticle's properties are determined largely by the interactions between these two sets of molecules. The proteins can be ordered by species.


Pssm-ID: 431611 [Multi-domain]  Cd Length: 182  Bit Score: 39.75  E-value: 1.35e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 168 SQPAPIKAETSQPAPREAETSQ----PAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPT 243
Cdd:pfam11018  53 SAPAPVVTKSAYAAPAPVVTTYahaaPAPVVAKTVYAAPAVVVYAAPAPVVAKTVTYAAPAVHYAAPAPVVAKTVYAAPA 132

                          90
                  ....*....|....*...
gi 1958669267 244 EAETSQPASTETETTQLP 261
Cdd:pfam11018 133 VQHYAAPAPVEAAAHAAP 150
SepH NF040712
septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces ...
 138-264 1.38e-03

septation protein SepH; Septation protein H (SepH) was firstly characterized in Streptomyces venezuelae, and homologs were identified in Mycobacterium smegmatis. SepH contains a N-terminal DUF3071 domain and a conserved C-terminal region. It binds directly to cell division protein FtsZ to stimulate the assembly of FtsZ protofilaments.


Pssm-ID: 468676 [Multi-domain]  Cd Length: 346  Bit Score: 40.52  E-value: 1.38e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 138 TRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAET 217
Cdd:NF040712  193 GRPLRPLATVPRLAREPADARPEEVEPAPAAEGAPATDSDPAEAGTPDDLASARRRRAGVEQPEDEPVGPGAAPAAEPDE 272

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*..
gi 1958669267 218 SQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTETETTQLPRSQ 264
Cdd:NF040712  273 ATRDAGEPPAPGAAETPEAAEPPAPAPAAPAAPAAPEAEEPARPEPP 319
PRK13042 PRK13042
superantigen-like protein SSL4; Reviewed;
147-244 1.40e-03

superantigen-like protein SSL4; Reviewed;


Pssm-ID: 183854 [Multi-domain]  Cd Length: 291  Bit Score: 40.39  E-value: 1.40e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 147 TSQPAprEAETSQPAPIKAETSQPAPIKAETSQPAPreaetsqpapteaETSQPAPTKAETSQPAPTeaeTSQPAPTEVE 226
Cdd:PRK13042   24 TTQAA--NATTPSSTKVEAPQSTPPSTKVEAPQSKP-------------NATTPPSTKVEAPQQTPN---ATTPSSTKVE 85

                          90
                  ....*....|....*...
gi 1958669267 227 TSQpapteAETSQPAPTE 244
Cdd:PRK13042   86 TPQ-----SPTTKQVPTE 98
PRK13914 PRK13914
invasion associated endopeptidase;
121-258 1.59e-03

invasion associated endopeptidase;


Pssm-ID: 237555 [Multi-domain]  Cd Length: 481  Bit Score: 40.56  E-value: 1.59e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 121 LSTESVTQRRLSPVEMTTRLAPTEAETSQPAPreAETSQPAPIKAETSQPAPIKAETSQPAPrEAETSQPAPTEAETSQP 200
Cdd:PRK13914  230 LSSSSIYVGQKLAIKQTANTATPKAEVKTEAP--AAEKQAAPVVKENTNTNTATTEKKETTT-QQQTAPKAPTEAAKPAP 306

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1958669267 201 APTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTETETT 258
Cdd:PRK13914  307 APSTNTNANKTNTNTNTNTNNTNTSTPSKNTNTNTNSNTNTNSNTNANQGSSNNNSNS 364
flhF PRK06995
flagellar biosynthesis protein FlhF;
136-257 1.85e-03

flagellar biosynthesis protein FlhF;


Pssm-ID: 235904 [Multi-domain]  Cd Length: 484  Bit Score: 40.33  E-value: 1.85e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 136 MTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEA 215
Cdd:PRK06995   51 LAPPAAAAPAAAQPPPAAAPAAVSRPAAPAAEPAPWLVEHAKRLTAQREQLVARAAAPAAPEAQAPAAPAERAAAENAAR 130

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|..
gi 1958669267 216 ETSQPAPtevetSQPAPTEAETSQPAPTEAETSQPASTETET 257
Cdd:PRK06995  131 RLARAAA-----AAPRPRVPADAAAAVADAVKARIERIVNDT 167
PRK04654 PRK04654
sec-independent translocase; Provisional
 151-230 1.89e-03

sec-independent translocase; Provisional


Pssm-ID: 135173 [Multi-domain]  Cd Length: 214  Bit Score: 39.41  E-value: 1.89e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 151 APREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAeTSQPAPTKAETSQPAPTEAETSQPAPTEVETSQP 230
Cdd:PRK04654  136 GQAHTPVPAPAPVIAQAQPIAPAPHQTLVPAPHDTIVPAPHAAHL-PSAPATPVSVAPVDAGTSASPTPSEPTKIQEKQP 214
PRK11633 PRK11633
cell division protein DedD; Provisional
 180-264 2.03e-03

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 39.60  E-value: 2.03e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 180 PAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTETETTQ 259
Cdd:PRK11633   57 PAATQALPTQPPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKPQQKVEAPPAPKPEPK 136


                  ....*
gi 1958669267 260 LPRSQ 264
Cdd:PRK11633  137 PVVEE 141
PRK13914 PRK13914
invasion associated endopeptidase;
146-259 2.08e-03

invasion associated endopeptidase;


Pssm-ID: 237555 [Multi-domain]  Cd Length: 481  Bit Score: 40.17  E-value: 2.08e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 146 ETSQPAPREAETSQPAPikAETSQPAPIKAETSQPAPREAETSQPApTEAETSQPAPTKAETSQPAPTEAETSQPAPTEV 225
Cdd:PRK13914  245 QTANTATPKAEVKTEAP--AAEKQAAPVVKENTNTNTATTEKKETT-TQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNT 321

                          90       100       110
                  ....*....|....*....|....*....|....
gi 1958669267 226 ETSQPAPTEAETSQPAPTEAETSQPASTETETTQ 259
Cdd:PRK13914  322 NTNTNNTNTSTPSKNTNTNTNSNTNTNSNTNANQ 355
PRK13335 PRK13335
superantigen-like protein SSL3; Reviewed;
129-284 2.24e-03

superantigen-like protein SSL3; Reviewed;


Pssm-ID: 139494 [Multi-domain]  Cd Length: 356  Bit Score: 40.11  E-value: 2.24e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 129 RRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSqPAPTKAETS 208
Cdd:PRK13335    4 RTIAKTSLALGLLTTGAITVTTQSVKAEKIQSTKVDKVPTLKAERLAMINITAGANSATTQAANTRQERT-PKLEKAPNT 82

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 209 QPAPTEA----ETSQPAPTEVET-SQPAPTEAETSQP-APTEAETSQPASTETETTQLPR-SQVVESLFTTSAVTEAPST 281
Cdd:PRK13335   83 NEEKTSAskieKISQPKQEEQKSlNISATPAPKQEQSqTTTESTTPKTKVTTPPSTNTPQpMQSTKSDTPQSPTIKQAQT 162


                  ...
gi 1958669267 282 EPT 284
Cdd:PRK13335  163 DMT 165
PHA03247 PHA03247
large tegument protein UL36; Provisional
 92-284 2.26e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 40.69  E-value: 2.26e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267   92 GAGTSETVTAQVATTGPADPDTERP----AVGMLSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAET 167
Cdd:PHA03247  2640 PHPPPTVPPPERPRDDPAPGRVSRPrrarRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAPHALVSAT 2719

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  168 SQPaPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAET 247
Cdd:PHA03247  2720 PLP-PGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESL 2798

                          170       180       190
                   ....*....|....*....|....*....|....*..
gi 1958669267  248 SQPASTETETTQLPRSQVVESLFTTSAVTEAPSTEPT 284
Cdd:PHA03247  2799 PSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSAQ 2835
PHA03247 PHA03247
large tegument protein UL36; Provisional
 102-331 2.34e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 40.69  E-value: 2.34e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  102 QVATTGPADPDTERPAVGMLSTESVTqRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPikaETSQPA 181
Cdd:PHA03247  2730 QASPALPAAPAPPAVPAGPATPGGPA-RPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLP---SPWDPA 2805

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  182 PREAETSQPAPTEAETSQPAPTKAETSQPAPTE-AETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPA-STETETTQ 259
Cdd:PHA03247  2806 DPPAAVLAPAAALPPAASPAGPLPPPTSAQPTApPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPAaPARPPVRR 2885

                          170       180       190       200       210       220       230
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958669267  260 LPRSQVVESlfTTSAVTEAPSTEPTAMETLSTEANESAIFLGPSIGHLPDTglkkglivTPGSSLAPTPPGT 331
Cdd:PHA03247  2886 LARPAVSRS--TESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPP--------PPPRPQPPLAPTT 2947
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 141-289 2.63e-03

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 40.45  E-value: 2.63e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  141 APTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETS-QPAPteaETSQPAPTKAETSqpAPTEAETSQ 219
Cdd:PRK10263   325 AATTATQSWAAPVEPVTQTPPVASVDVPPAQPTVAWQPVPGPQTGEPViAPAP---EGYPQQSQYAQPA--VQYNEPLQQ 399

                           90       100       110       120       130       140       150
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958669267  220 PAPTEVETSQPAP-TEAETSQPAPTEAETSQ-----PASTETETTQLPRSQVVESLFTTSAV--TEAPSTEPTAMETL 289
Cdd:PRK10263   400 PVQPQQPYYAPAAeQPAQQPYYAPAPEQPAQqpyyaPAPEQPVAGNAWQAEEQQSTFAPQSTyqTEQTYQQPAAQEPL 477
rne PRK10811
ribonuclease E; Reviewed
 61-241 2.80e-03

ribonuclease E; Reviewed


Pssm-ID: 236766 [Multi-domain]  Cd Length: 1068  Bit Score: 40.02  E-value: 2.80e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267   61 PPETLISVPNMVAAhlelrtMVAVLEQRVSAGAGTSETVTaqVATTGP---ADPDTERPAVGMLSTESVtqrrlspvemt 137
Cdd:PRK10811   878 AVEPVVSAPVVEAV------AEVVEEPVVVAEPQPEEVVV--VETTHPeviAAPVTEQPQVITESDVAV----------- 938

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  138 trlAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAE- 216
Cdd:PRK10811   939 ---AQEVAEHAEPVVEPQDETADIEEAAETAEVVVAEPEVVAQPAAPVVAEVAAEVETVTAVEPEVAPAQVPEATVEHNh 1015

                          170       180       190
                   ....*....|....*....|....*....|
gi 1958669267  217 -----TSQPAPTEVEtsqPAPTEAETSQPA 241
Cdd:PRK10811  1016 atapmTRAPAPEYVP---EAPRHSDWQRPT 1042
kgd PRK12270
multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine ...
 109-208 3.00e-03

multifunctional oxoglutarate decarboxylase/oxoglutarate dehydrogenase thiamine pyrophosphate-binding subunit/dihydrolipoyllysine-residue succinyltransferase subunit;


Pssm-ID: 237030 [Multi-domain]  Cd Length: 1228  Bit Score: 40.26  E-value: 3.00e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  109 ADPDTERPA-VGMLSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPikAETSQPAPREAET 187
Cdd:PRK12270    20 ADPNSVDPSwREFFADYGPGSTAAPTAAAAAAAAAASAPAAAPAAKAPAAPAPAPPAAAAPAAPP--KPAAAAAAAAAPA 97

                           90       100
                   ....*....|....*....|.
gi 1958669267  188 SQPAPTEAETSQPAPTKAETS 208
Cdd:PRK12270    98 APPAAAAAAAPAAAAVEDEVT 118
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
183-254 3.17e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 39.98  E-value: 3.17e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958669267 183 REAETSQPAPTEAETSQPAPTKAET--SQPAPTEAETSQPAPtevETSQPAPTEAETSQPAPTEAETSQPASTE 254
Cdd:COG5373    38 AEAAEAASAPAEPEPEAAAAATAAApeAAPAPVPEAPAAPPA---AAEAPAPAAAAPPAEAEPAAAPAAASSFE 108
PRK11633 PRK11633
cell division protein DedD; Provisional
 108-193 3.31e-03

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 38.83  E-value: 3.31e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 108 PADPDTERPAVGMLSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPikaetsQPAPIKAETSQPAPREAET 187
Cdd:PRK11633   67 PPEGAAEAVRAGDAAAPSLDPATVAPPNTPVEPEPAPVEPPKPKPVEKPKPKPKP------QQKVEAPPAPKPEPKPVVE 140


                  ....*.
gi 1958669267 188 SQPAPT 193
Cdd:PRK11633  141 EKAAPT 146
sucB TIGR01347
2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); This ...
 143-298 3.56e-03

2-oxoglutarate dehydrogenase complex dihydrolipoamide succinyltransferase (E2 component); This model describes the TCA cycle 2-oxoglutarate system E2 component, dihydrolipoamide succinyltransferase. It is closely related to the pyruvate dehydrogenase E2 component, dihydrolipoamide acetyltransferase. The seed for this model includes mitochondrial and Gram-negative bacterial forms. Mycobacterial candidates are highly derived, differ in having and extra copy of the lipoyl-binding domain at the N-terminus. They score below the trusted cutoff, but above the noise cutoff and above all examples of dihydrolipoamide acetyltransferase. [Energy metabolism, TCA cycle]


Pssm-ID: 273565 [Multi-domain]  Cd Length: 403  Bit Score: 39.33  E-value: 3.56e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 143 TEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPRE-AETSQPAPTEAETSQPAPTKAETSQPAPTEAETSqpa 221
Cdd:TIGR01347  78 NDATAAPPAKSGEEKEETPAASAAAAPTAAANRPSLSPAARRlAKEHGIDLSAVPGTGVTGRVTKEDIIKKTEAPAS--- 154

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958669267 222 pteveTSQPAPTEAETSQPAPTEAETSQPasteteTTQLpRSQVVESLfttsavTEAPSTepTAMETLSTEANESAI 298
Cdd:TIGR01347 155 -----AQPPAAAAAAAAPAAATRPEERVK------MTRL-RQRIAERL------KEAQNS--TAMLTTFNEVDMSAV 211
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
126-224 3.58e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 39.60  E-value: 3.58e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 126 VTQRRLSpvemtTRLAPTEAETSQPAPREAETSQPAP-IKAETSQPAPikaeTSQPAPREAEtsqPAPTEAETSQPAPTK 204
Cdd:COG5373    21 GRVARLR-----RRVEELEAELAEAAEAASAPAEPEPeAAAAATAAAP----EAAPAPVPEA---PAAPPAAAEAPAPAA 88

                          90       100
                  ....*....|....*....|
gi 1958669267 205 AETSQPAPTEAETSQPAPTE 224
Cdd:COG5373    89 AAPPAEAEPAAAPAAASSFE 108
motB PRK05996
MotB family protein;
158-278 3.64e-03

MotB family protein;


Pssm-ID: 235665 [Multi-domain]  Cd Length: 423  Bit Score: 39.30  E-value: 3.64e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 158 SQPAPIKAEtSQPAPIKAETSQPAPREAETSQPAPTEaetsQPAPTKAETSQPAPTEAETSQPAPTEVETsQPAPTEAET 237
Cdd:PRK05996  187 SKQVEVTTA-GDLLPPGQAREQAQGAKSATAAPATVP----QAAPLPQAQPKKAATEEELIADAKKAATG-EPAANAAKA 260

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1958669267 238 SQPAPTEAETSQPASTETETTQLPRSQVVESLFTTSAVTEA 278
Cdd:PRK05996  261 AKPEPMPDDQQKEAEQLQAAIAQAIGGVAGKLAEGVTVTPV 301
PRK14949 PRK14949
DNA polymerase III subunits gamma and tau; Provisional
 148-283 4.49e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237863 [Multi-domain]  Cd Length: 944  Bit Score: 39.32  E-value: 4.49e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 148 SQPAPREAETSQPAPIKAETSQPAPikaETSQPAPREAETSQPAPTEaetSQPAPTKAETSQPAP--TEAETSQPAPTEV 225
Cdd:PRK14949  652 APPASLSKPASSPDASQTSASFDLD---PDFELATHQSVPEAALASG---SAPAPPPVPDPYDRPpwEEAPEVASANDGP 725

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958669267 226 ETSQPAPTEAETSQPAPTEAETSQPAST---ETETTQLPRSQVVESLFTTSAVTEAPSTEP 283
Cdd:PRK14949  726 NNAAEGNLSESVEDASNSELQAVEQQAThqpQVQAEAQSPASTTALTQTSSEVQDTELNLV 786
PRK12373 PRK12373
NADH-quinone oxidoreductase subunit E;
133-254 4.64e-03

NADH-quinone oxidoreductase subunit E;


Pssm-ID: 237082 [Multi-domain]  Cd Length: 400  Bit Score: 39.01  E-value: 4.64e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 133 PVEMTTRLAPTEAETSQPAPREAETSQPAPIKA----ETSQPAPIKAETSQPAPREAETsqPAPTEAETSQPAPTKAETS 208
Cdd:PRK12373  190 PAGGLTSLTEEAGKARYNASKALAEDIGDTVKRidgtEVPLLAPWQGDAAPVPPSEAAR--PKSADAETNAALKTPATAP 267

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1958669267 209 QPAPTEAETSQPAPTEVETSQ-PAPTEA---ETSQPAPTEAETSQPASTE 254
Cdd:PRK12373  268 KAAAKNAKAPEAQPVSGTAAAePAPKEAakaAAAAAKPALEDKPRPLGIA 317
PRK10856 PRK10856
cytoskeleton protein RodZ;
122-221 4.92e-03

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 38.85  E-value: 4.92e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 122 STESVTQRRLSPVEMTTRLAPTEAETSQPAPreAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPA 201
Cdd:PRK10856  150 SSAELSQNSGQSVPLDTSTTTDPATTPAPAA--PVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAA 227

                          90       100
                  ....*....|....*....|.
gi 1958669267 202 PTKAETSQPAPTEAE-TSQPA 221
Cdd:PRK10856  228 PATPDGAAPLPTDQAgVSTPA 248
PRK13335 PRK13335
superantigen-like protein SSL3; Reviewed;
157-296 4.93e-03

superantigen-like protein SSL3; Reviewed;


Pssm-ID: 139494 [Multi-domain]  Cd Length: 356  Bit Score: 38.95  E-value: 4.93e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 157 TSQPApiKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSqPAPTEAETSQPAPTEVETSQpapteaE 236
Cdd:PRK13335   24 TTQSV--KAEKIQSTKVDKVPTLKAERLAMINITAGANSATTQAANTRQERT-PKLEKAPNTNEEKTSASKIE------K 94

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958669267 237 TSQPAPTEAETSQPASTETETTQLPRSQvVESLFTTSAVTEAPSTE-PTAMETLSTEANES 296
Cdd:PRK13335   95 ISQPKQEEQKSLNISATPAPKQEQSQTT-TESTTPKTKVTTPPSTNtPQPMQSTKSDTPQS 154
PRK07994 PRK07994
DNA polymerase III subunits gamma and tau; Validated
 71-269 4.99e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236138 [Multi-domain]  Cd Length: 647  Bit Score: 39.08  E-value: 4.99e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  71 MVAAHLELRTMVAVLEQRVSAGAGTSETVTAQVATTGPADPDTERPAVgmlstESVTQRRLSPVEMTTRLAPTEAETS-Q 149
Cdd:PRK07994  356 MLAFHPAAPLPEPEVPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPP-----ASAPQQAPAVPLPETTSQLLAARQQlQ 430

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 150 PAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAEtsqPAPTEAETSQPAPTEVETSQ 229
Cdd:PRK07994  431 RAQGATKAKKSEPAAASRARPVNSALERLASVRPAPSALEKAPAKKEAYRWKATNPV---EVKKEPVATPKALKKALEHE 507

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|
gi 1958669267 230 PAPTEAetsqpAPTEAETSQPASTETETTQLPRSQVVESL 269
Cdd:PRK07994  508 KTPELA-----AKLAAEAIERDPWAALVSQLGLPGLVEQL 542
DamX COG3266
Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell ...
 114-266 5.08e-03

Cell division protein DamX, binds to the septal ring, contains C-terminal SPOR domain [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442497 [Multi-domain]  Cd Length: 455  Bit Score: 39.06  E-value: 5.08e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 114 ERPAVGMLSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQ-----PAPIKAETSQPAPREAETS 188
Cdd:COG3266   221 AAAAELAALALLAAGAAEVLTARLVLLLLIIGSALKAPSQASSASAPATTSLGEQQevslpPAVAAQPAAAAAAQPSAVA 300

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958669267 189 QPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVetsqPAPTEAETSQPAPTEAETSQPASTETETTQLPRSQVV 266
Cdd:COG3266   301 LPAAPAAAAAAAAPAEAAAPQPTAAKPVVTETAAPAA----PAPEAAAAAAAPAAPAVAKKLAADEQWLASQPASHYT 374
COG5373 COG5373
Uncharacterized membrane protein [Function unknown];
175-245 5.19e-03

Uncharacterized membrane protein [Function unknown];


Pssm-ID: 444140 [Multi-domain]  Cd Length: 854  Bit Score: 39.21  E-value: 5.19e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958669267 175 AETSQPAPREAETSQPAPTEAET--SQPAPTKAEtsqPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEA 245
Cdd:COG5373    40 AAEAASAPAEPEPEAAAAATAAApeAAPAPVPEA---PAAPPAAAEAPAPAAAAPPAEAEPAAAPAAASSFEE 109
PRK13914 PRK13914
invasion associated endopeptidase;
136-297 5.71e-03

invasion associated endopeptidase;


Pssm-ID: 237555 [Multi-domain]  Cd Length: 481  Bit Score: 39.01  E-value: 5.71e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 136 MTTRLAPTEAETSQPAPREAETSQPAP---IKAETSQPAPIKAetsqPAPREAETS------QPAPTEAETS-------- 198
Cdd:PRK13914  139 LTDKVTSTPVAPTQEVKKETTTQQAAPaaeTKTEVKQTTQATT----PAPKVAETKetpvvdQNATTHAVKSgdtiwals 214

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 199 ------------------------------QPAPT---KAETSQPAPTEAETSQPAPTEVETSQPAPTE-------AETS 238
Cdd:PRK13914  215 vkygvsvqdimswnnlssssiyvgqklaikQTANTatpKAEVKTEAPAAEKQAAPVVKENTNTNTATTEkketttqQQTA 294

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1958669267 239 QPAPTEAETSQPASTETETTQLPRSQVVESLFTTSAVTEAPSTEPTAMETLSTEANESA 297
Cdd:PRK13914  295 PKAPTEAAKPAPAPSTNTNANKTNTNTNTNTNNTNTSTPSKNTNTNTNSNTNTNSNTNA 353
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
 90-308 5.81e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 39.00  E-value: 5.81e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267   90 SAGAGTSETVTAQVATTGPADPDTERPAVGMLSTESVTQRRLSPVEM--TTRLAPTEAETSQPAPREAETSQPAPIKAET 167
Cdd:PHA03307    58 GAAACDRFEPPTGPPPGPGTEAPANESRSTPTWSLSTLAPASPAREGspTPPGPSSPDPPPPTPPPASPPPSPAPDLSEM 137

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  168 SQPAPIKAETSQPAPREAETSQPAPTEAETS--QPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEA 245
Cdd:PHA03307   138 LRPVGSPGPPPAASPPAAGASPAAVASDAASsrQAALPLSSPEETARAPSSPPAEPPPSTPPAAASPRPPRRSSPISASA 217

                          170       180       190       200       210       220
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958669267  246 ETSQPASTETETTQLPRSQVVESLFTTSAVTEAPSTE----PTAMETLSTEANESAIFLGPSIGHLP 308
Cdd:PHA03307   218 SSPAPAPGRSAADDAGASSSDSSSSESSGCGWGPENEcplpRPAPITLPTRIWEASGWNGPSSRPGP 284
PRK12757 PRK12757
cell division protein FtsN; Provisional
 176-259 6.14e-03

cell division protein FtsN; Provisional


Pssm-ID: 237191 [Multi-domain]  Cd Length: 256  Bit Score: 38.10  E-value: 6.14e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 176 ETSQPAPREAETSQPaptEAETSQPAPTkaeTSQPAPTEAETSQPAPteVETSQPAPTEAETSQPAPTEAETSQPAStET 255
Cdd:PRK12757  109 EQTPQVPRSTVQIQQ---QAQQQQPPAT---TAQPQPVTPPRQTTAP--VQPQTPAPVRTQPAAPVTQAVEAPKVEA-EK 179


                  ....
gi 1958669267 256 ETTQ 259
Cdd:PRK12757  180 EKEQ 183
PRK12373 PRK12373
NADH-quinone oxidoreductase subunit E;
102-236 6.24e-03

NADH-quinone oxidoreductase subunit E;


Pssm-ID: 237082 [Multi-domain]  Cd Length: 400  Bit Score: 38.63  E-value: 6.24e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 102 QVATTGPAdPDTER----PAVGM--LSTESVTQRRLSPVEMTTRLAPT----EAETSQPAPREAETSQPAPiKAETSQPA 171
Cdd:PRK12373  173 KGPVVKPG-PQIGRyasePAGGLtsLTEEAGKARYNASKALAEDIGDTvkriDGTEVPLLAPWQGDAAPVP-PSEAARPK 250

                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958669267 172 PIKAETSQPAPREAETSQPAPTEAETSQPAPT-KAETSQPAPTEAETSQPAPT-EVETSQPAPTEAE 236
Cdd:PRK12373  251 SADAETNAALKTPATAPKAAAKNAKAPEAQPVsGTAAAEPAPKEAAKAAAAAAkPALEDKPRPLGIA 317
PHA01929 PHA01929
putative scaffolding protein
 143-253 6.66e-03

putative scaffolding protein


Pssm-ID: 177328  Cd Length: 306  Bit Score: 38.50  E-value: 6.66e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 143 TEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAetSQPAP 222
Cdd:PHA01929    2 TQNEQQLPPGLAGLVANVPPAAAPTPQPNPVIQPQAPVQPGQPGAPQQLAIPTQQPQPVPTSAMTPHVVQQAP--AQPAP 79

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1958669267 223 TEVETSQPAPTEAETSQPAPTEAETSQPAST 253
Cdd:PHA01929   80 AAPPAAGAALPEALEVPPPPAFTPNGEIVGT 110
ZipA COG3115
Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome ...
 139-266 6.72e-03

Cell division protein ZipA, interacts with FtsZ [Cell cycle control, cell division, chromosome partitioning];


Pssm-ID: 442349 [Multi-domain]  Cd Length: 298  Bit Score: 38.13  E-value: 6.72e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 139 RLAPTEAETSQPAPREAETSQPAPIKAETSQP-APIKAETSQPAPrEAETSQPAPTEAETSQPAPTKAETSQPAPTEAEt 217
Cdd:COG3115    35 RDKPSKRDVLLDDDGIGEVRVVAAEAPERVEPeASFDAEDEVREP-DQEEVDPLLDDEADIEAAPAEPVRWAGTAAAVE- 112

                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*....
gi 1958669267 218 SQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTETETTQLPRSQVV 266
Cdd:COG3115   113 PAPEQEAYEEAGPAGESAEQEDAPAEEPEAEAPAEEALAAELCAEPEEV 161
NDFIP2 cd22306
NEDD4 family-interacting protein 2; The NEDD4 (neural precursor cell expressed, ...
 166-256 6.72e-03

NEDD4 family-interacting protein 2; The NEDD4 (neural precursor cell expressed, developmentally down-regulated protein 4)-family interacting proteins (NDFIPs) are adaptor proteins that recruit NEDD4 E3 ligases to specific substrate proteins, which leads to the ubiquitylation and subsequent degradation of these proteins. They also act as activators of the E3 ligase activity by releasing NEDD4 ligase from its auto-inhibitory conformation. NDFIP2 may play a role in protein trafficking.


Pssm-ID: 412070 [Multi-domain]  Cd Length: 229  Bit Score: 37.95  E-value: 6.72e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 166 ETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQ-----PAPTEVETSQPAPTEAETSQP 240
Cdd:cd22306    10 EDDPSESSASEQPSTSTQVQESSSNPAPETDAPPPPYSSITAGATAAPGTETQSefypvPPPYSVATSLPTYDEAEKAKA 89

                          90
                  ....*....|....*.
gi 1958669267 241 APTEAETSQPASTETE 256
Cdd:cd22306    90 AAMAAAAAEVAQREEE 105
PTZ00144 PTZ00144
dihydrolipoamide succinyltransferase; Provisional
 185-264 6.93e-03

dihydrolipoamide succinyltransferase; Provisional


Pssm-ID: 240289 [Multi-domain]  Cd Length: 418  Bit Score: 38.51  E-value: 6.93e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 185 AETSQPAPTEAETSQPAPTKAETSQPAPTEAETSQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTETETTQLPRSQ 264
Cdd:PTZ00144  113 APLSEIDTGGAPPAAAPAAAAAAKAEKTTPEKPKAAAPTPEPPAASKPTPPAAAKPPEPAPAAKPPPTPVARADPRETRV 192
PRK11907 PRK11907
bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;
197-289 7.19e-03

bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase;


Pssm-ID: 237019 [Multi-domain]  Cd Length: 814  Bit Score: 38.68  E-value: 7.19e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 197 TSQPAPTKAETSQPAP-TEAETSQPAPTEvetsQPApTEAETSQPAPTEAETSQPASTETETTQLPRSQVVEslfTTSAV 275
Cdd:PRK11907   21 SNPKLAQAEEIVTTTPaTSTEAEQTTPVE----SDA-TEEADNTETPVAATTAAEAPSSSETAETSDPTSEA---TDTTT 92

                          90
                  ....*....|....
gi 1958669267 276 TEAPSTEPTAMETL 289
Cdd:PRK11907   93 SEARTVTPAATETS 106
PRK12757 PRK12757
cell division protein FtsN; Provisional
 146-229 7.35e-03

cell division protein FtsN; Provisional


Pssm-ID: 237191 [Multi-domain]  Cd Length: 256  Bit Score: 38.10  E-value: 7.35e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 146 ETSQPAPREAETSQPapiKAETSQPAPikaETSQPAPREAETSQPAPteAETSQPAPTKAETSQPAPTEAETSQPaPTEV 225
Cdd:PRK12757  109 EQTPQVPRSTVQIQQ---QAQQQQPPA---TTAQPQPVTPPRQTTAP--VQPQTPAPVRTQPAAPVTQAVEAPKV-EAEK 179


                  ....
gi 1958669267 226 ETSQ 229
Cdd:PRK12757  180 EKEQ 183
PRK11633 PRK11633
cell division protein DedD; Provisional
 131-223 7.56e-03

cell division protein DedD; Provisional


Pssm-ID: 236940 [Multi-domain]  Cd Length: 226  Bit Score: 37.67  E-value: 7.56e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 131 LSPVEMTTRLAPTE--AETSQPAPREAETSQPAPIKAETSQ--PAPIKAETSQPAPREAetsqpaPTEAETSQPAPTKAE 206
Cdd:PRK11633   56 MPAATQALPTQPPEgaAEAVRAGDAAAPSLDPATVAPPNTPvePEPAPVEPPKPKPVEK------PKPKPKPQQKVEAPP 129

                          90
                  ....*....|....*..
gi 1958669267 207 TSQPAPTEAETSQPAPT 223
Cdd:PRK11633  130 APKPEPKPVVEEKAAPT 146
PHA03247 PHA03247
large tegument protein UL36; Provisional
 121-249 7.77e-03

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 38.77  E-value: 7.77e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  121 LSTESVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPiKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQP 200
Cdd:PHA03247   368 LSAGRHHPKRASLPTRKRRSARHAATPFARGPGGDDQTRPAA-PVPASVPTPAPTPVPASAPPPPATPLPSAEPGSDDGP 446

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*....
gi 1958669267  201 APTKAetSQPAPTEAETSQPAPTEVeTSQPAPTEAETSQPAPTEAETSQ 249
Cdd:PHA03247   447 APPPE--RQPPAPATEPAPDDPDDA-TRKALDALRERRPPEPPGADLAE 492
PRK10263 PRK10263
DNA translocase FtsK; Provisional
 52-328 7.91e-03

DNA translocase FtsK; Provisional


Pssm-ID: 236669 [Multi-domain]  Cd Length: 1355  Bit Score: 38.91  E-value: 7.91e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267   52 PDYSVYgtDPPETLISVPNMVAAHLELRTMVAVLEQRVSAGAGTSETVTAQVATTGPA-------DPDTERPAVGMlSTE 124
Cdd:PRK10263   302 PEYDEY--DPLLNGAPITEPVAVAAAATTATQSWAAPVEPVTQTPPVASVDVPPAQPTvawqpvpGPQTGEPVIAP-APE 378

                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  125 SVTQRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTK 204
Cdd:PRK10263   379 GYPQQSQYAQPAVQYNEPLQQPVQPQQPYYAPAAEQPAQQPYYAPAPEQPAQQPYYAPAPEQPVAGNAWQAEEQQSTFAP 458

                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267  205 AETSQPaptEAETSQPAPTEVETSQPAPTEAE-TSQPAPTEAET--SQPASTETETTQLPRSQVVESLFTTSAVTEAPST 281
Cdd:PRK10263   459 QSTYQT---EQTYQQPAAQEPLYQQPQPVEQQpVVEPEPVVEETkpARPPLYYFEEVEEKRAREREQLAAWYQPIPEPVK 535

                          250       260       270       280
                   ....*....|....*....|....*....|....*....|....*....
gi 1958669267  282 EPTAME-TLSTEANESAIFLGPSIGHLP-DTGLKKGLIVTPGSSLAPTP 328
Cdd:PRK10263   536 EPEPIKsSLKAPSVAAVPPVEAAAAVSPlASGVKKATLATGAAATVAAP 584
PRK10927 PRK10927
cell division protein FtsN;
128-213 8.65e-03

cell division protein FtsN;


Pssm-ID: 236797 [Multi-domain]  Cd Length: 319  Bit Score: 38.12  E-value: 8.65e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 128 QRRLSPVEMTTRLAPTEAETSQPAPREAETSQPAPIKAETSQPAPikAETSQPAPREAETSQPAPTEAETSQPAPTKAET 207
Cdd:PRK10927  156 QRQAQQLAEQQRLAQQSRTTEQSWQQQTRTSQAAPVQAQPRQSKP--ASTQQPYQDLLQTPAHTTAQSKPQQAAPVTRAA 233


                  ....*.
gi 1958669267 208 SQPAPT 213
Cdd:PRK10927  234 DAPKPT 239
PRK10856 PRK10856
cytoskeleton protein RodZ;
148-241 9.54e-03

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 38.08  E-value: 9.54e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 148 SQPAPREAETSQPApikAETSQPAPIKAETSQPAPREAETSQPAPTeAETSQPAPTkaETSQPAPTEAETSQPAPTEV-E 226
Cdd:PRK10856  159 GQSVPLDTSTTTDP---ATTPAPAAPVDTTPTNSQTPAVATAPAPA-VDPQQNAVV--APSQANVDTAATPAPAAPATpD 232

                          90
                  ....*....|....*.
gi 1958669267 227 TSQPAPTEAE-TSQPA 241
Cdd:PRK10856  233 GAAPLPTDQAgVSTPA 248
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
 149-283 9.76e-03

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 38.04  E-value: 9.76e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958669267 149 QPAPREAETSQPAPIKAETSQPAPIKAETSQPAPREAETSQPAPTEAETSQPAPTKAET------SQPAPTEA-----ET 217
Cdd:PRK13108  294 EALEREPAELAAAAVASAASAVGPVGPGEPNQPDDVAEAVKAEVAEVTDEVAAESVVQVadrdgeSTPAVEETseadiER 373

                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958669267 218 SQPAPTEVETSQPAPTEAETSQPAPTEAETSQPASTETET-----TQLPRSQVVESLFTTSAVTEAPSTEP 283
Cdd:PRK13108  374 EQPGDLAGQAPAAHQVDAEAASAAPEEPAALASEAHDETEpevpeKAAPIPDPAKPDELAVAGPGDDPAEP 444
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH