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Conserved domains on  [gi|1958687190|ref|XP_038950693|]
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kxDL motif-containing protein 1 isoform X5 [Rattus norvegicus]

Protein Classification

KxDL motif-containing protein( domain architecture ID 10562996)

KxDL motif-containing protein similar to Saccharomyces cerevisiae biogenesis of lysosome-related organelles complex 1 (BLOC-1 ) subunit KXD1, a component of the BLOC-1 complex that is involved in endosomal cargo sorting

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
KxDL pfam10241
Uncharacterized conserved protein; This is a family of short proteins which are conserved over ...
 14-93 5.67e-34

Uncharacterized conserved protein; This is a family of short proteins which are conserved over a region of 80 residues. There is a characteriztic KxDL motif towards the C-terminus. The function is unknown.


:

Pssm-ID: 463018  Cd Length: 80  Bit Score: 114.93  E-value: 5.67e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958687190  14 RFLSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSVRLQQMSERFMHHTRTLVDMKRDLDSIFRRIRTLKGKLAR 93
Cdd:pfam10241   1 RLTQAVDSEDLDEILALQAQTSGRLNKKNRELLNLNALSQERLAKLRARFAQGTKLLKEMKKDLEWIFKKIRSLKAKLAK 80
 
Name Accession Description Interval E-value
KxDL pfam10241
Uncharacterized conserved protein; This is a family of short proteins which are conserved over ...
 14-93 5.67e-34

Uncharacterized conserved protein; This is a family of short proteins which are conserved over a region of 80 residues. There is a characteriztic KxDL motif towards the C-terminus. The function is unknown.


Pssm-ID: 463018  Cd Length: 80  Bit Score: 114.93  E-value: 5.67e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958687190  14 RFLSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSVRLQQMSERFMHHTRTLVDMKRDLDSIFRRIRTLKGKLAR 93
Cdd:pfam10241   1 RLTQAVDSEDLDEILALQAQTSGRLNKKNRELLNLNALSQERLAKLRARFAQGTKLLKEMKKDLEWIFKKIRSLKAKLAK 80
 
Name Accession Description Interval E-value
KxDL pfam10241
Uncharacterized conserved protein; This is a family of short proteins which are conserved over ...
 14-93 5.67e-34

Uncharacterized conserved protein; This is a family of short proteins which are conserved over a region of 80 residues. There is a characteriztic KxDL motif towards the C-terminus. The function is unknown.


Pssm-ID: 463018  Cd Length: 80  Bit Score: 114.93  E-value: 5.67e-34
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958687190  14 RFLSMVNTDDVNAIILAQKNMLDRFEKTNEMLLNFNNLSSVRLQQMSERFMHHTRTLVDMKRDLDSIFRRIRTLKGKLAR 93
Cdd:pfam10241   1 RLTQAVDSEDLDEILALQAQTSGRLNKKNRELLNLNALSQERLAKLRARFAQGTKLLKEMKKDLEWIFKKIRSLKAKLAK 80
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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